prot_E-fasciculatus_F_contig11381.1109.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig11381.1109.1
Unique Nameprot_E-fasciculatus_F_contig11381.1109.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length658
Homology
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BLAST of mRNA_E-fasciculatus_F_contig11381.1109.1 vs. uniprot
Match: A0A6H5KS00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS00_9PHAE)

HSP 1 Score: 545 bits (1405), Expect = 4.350e-180
Identity = 405/558 (72.58%), Postives = 423/558 (75.81%), Query Frame = 0 
Query:   64 AGTTPRRAALGRLSAAAEGNDDLGADDVDDGWDGNLDALDAQLRREEAGATQQXXXXXXXXQAAAGFDDGFSALDDLLGVEDPSSTSPRARRESGSGDVDIDPFAELDFPVVTDSLDDLLSELPPGGAPAAGNKVGSGRRPAXXXXXXXXXXXXXXXXXXXG---AAVSESWLDDLLDLDNEDLKVSSSSTAAADTAAAADPSSASGILESLIDDVTGRGDIG-DGPRSAAEVPGRPVTRAAVPTPPSNPPADSPAALDDWLNELLEEDKNSPGAPPKSXXXXXXXXXXXXXXXXRREASLEDDPWGFAAKEGDSSGS--------GSDSSSFGDVIRGSNQLEGWKANTGGSSDAPRRSNVMGRRARGTGSSSNSLGSDGGAASAEGTSRPWDPESRSEEAEGGRSSDWGAGDAWTSKGDSGVSWWDKDGPGMGMEEATGRRGPGKRESDPIEEAQRACAADLKKLGQRGQWEDATRALVGARVRGVPVNVYMYNSAISAVSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDEMVQVHG 609
            +GT PRRAALGRLSAAAEGND LG  D DDGWDGNLDALDAQLRR EAG TQQ         AAAGFDDGFSALDDLLGVED  S SPRA R S S DVDIDPFA+LD PV+TDSLDDLLSELP   APAAGN+  +GRRP  XXXXXXXXXXXXXXXXXX    AAVSESWLDDLLDLDNE+L+VSS                                    DGPRSAA+VP RPVT  AVP PPSNP AD+ AALDDWLN+LLEED  +     ++                R  ASLEDDPW FAAKEGDSSGS                DV+ GSNQLEGWKANT  S+DAPRRSNVMGRRARGTGSSS S GS GG A+AEGTSRPWDPES SEE  GGRSSDWG GDAW SKG+SGVSWWDKDGPGMGMEE TGRRG GKRE DP+EEAQRACAADLKKLGQRGQWEDATRALVGARVRGVPVNVYMYNSAISAVSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LDEMVQVHG
Sbjct:   65 SGTIPRRAALGRLSAAAEGNDGLGVGDDDDGWDGNLDALDAQLRR-EAGPTQQQQQGQAAALAAAGFDDGFSALDDLLGVEDSPSASPRAPRSSRSNDVDIDPFAKLDSPVITDSLDDLLSELP--AAPAAGNQAAAGRRPTAXXXXXXXXXXXXXXXXXXXSGTAAVSESWLDDLLDLDNENLEVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGPRSAAKVPDRPVTGDAVPIPPSNP-ADTSAALDDWLNDLLEEDNKNKNNQERTKLSKPAAPFQQEQ---RLRASLEDDPWDFAAKEGDSSGSFXXXXXXXXXXXXXXXDVVTGSNQLEGWKANTVSSADAPRRSNVMGRRARGTGSSSTS-GSPGGGAAAEGTSRPWDPESGSEEGAGGRSSDWGTGDAWKSKGESGVSWWDKDGPGMGMEETTGRRGQGKRELDPVEEAQRACAADLKKLGQRGQWEDATRALVGARVRGVPVNVYMYNSAISAVSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLDEMVQVHG 614
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BLAST of mRNA_E-fasciculatus_F_contig11381.1109.1 vs. uniprot
Match: D8LU53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU53_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 2.090e-71
Identity = 182/196 (92.86%), Postives = 186/196 (94.90%), Query Frame = 0 
Query:  414 MGRRARGTGSSSNSLGSDGGAASAEGTSRPWDPESRSEEAEGGRSSDWGAGDAWTSKGDSGVSWWDKDGPGMGMEEATGRRGPGKRESDPIEEAQRACAADLKKLGQRGQWEDATRALVGARVRGVPVNVYMYNSAISAVSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDEMVQVHG 609
            MGRRARGTGSSS S GS GG A+AEGTSRPWDPESRSE+  GGRSSDWG GDAWTSKG+SGVSWWDKDGPGMGMEEATGRRG GKRE DP+EEAQRACAADLKKLGQRGQWEDATRALVGARVRGVPVNVYMYNSAISAVSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LDEMVQVHG
Sbjct:    1 MGRRARGTGSSSGSSGSPGGGAAAEGTSRPWDPESRSEQGAGGRSSDWGTGDAWTSKGESGVSWWDKDGPGMGMEEATGRRGQGKRELDPVEEAQRACAADLKKLGQRGQWEDATRALVGARVRGVPVNVYMYNSAISAVSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLDEMVQVHG 196
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11381.1109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KS00_9PHAE4.350e-18072.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU53_ECTSI2.090e-7192.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 616..645
e-value: 8.2E-4
score: 19.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 542..588
e-value: 1.3E-10
score: 41.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 615..648
e-value: 5.2E-5
score: 21.2
coord: 579..613
e-value: 1.2E-7
score: 29.4
coord: 544..578
e-value: 2.5E-7
score: 28.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 577..612
score: 10.72
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 613..647
score: 10.534
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 542..576
score: 11.751
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 509..658
e-value: 2.7E-37
score: 130.7
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 538..656
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..658
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.779

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11381contigE-fasciculatus_F_contig11381:1065..4015 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11381.1109.1mRNA_E-fasciculatus_F_contig11381.1109.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig11381 1065..4015 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig11381.1109.1 ID=prot_E-fasciculatus_F_contig11381.1109.1|Name=mRNA_E-fasciculatus_F_contig11381.1109.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=658bp
MTLWRLAASSLLLASANSFVLPPASTPQQVPSRAAAAATCSGGCCSHASP
RTATATAAAAATPAGTTPRRAALGRLSAAAEGNDDLGADDVDDGWDGNLD
ALDAQLRREEAGATQQQQPEQAAAQAAAGFDDGFSALDDLLGVEDPSSTS
PRARRESGSGDVDIDPFAELDFPVVTDSLDDLLSELPPGGAPAAGNKVGS
GRRPAAAARTSRPPAPSSSSSSASGAAVSESWLDDLLDLDNEDLKVSSSS
TAAADTAAAADPSSASGILESLIDDVTGRGDIGDGPRSAAEVPGRPVTRA
AVPTPPSNPPADSPAALDDWLNELLEEDKNSPGAPPKSKPAAAAAAAAPF
QQEQRREASLEDDPWGFAAKEGDSSGSGSDSSSFGDVIRGSNQLEGWKAN
TGGSSDAPRRSNVMGRRARGTGSSSNSLGSDGGAASAEGTSRPWDPESRS
EEAEGGRSSDWGAGDAWTSKGDSGVSWWDKDGPGMGMEEATGRRGPGKRE
SDPIEEAQRACAADLKKLGQRGQWEDATRALVGARVRGVPVNVYMYNSAI
SAVSKAGRWKEALSMMKQMEKDGIALDEFTYSSVIVACGRGGKPRKALEL
LDEMVQVHGIVPDMICYGAAIQACGDAGLTEEALSLMERMSGEGLLPDKT
AYNSAIIA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat