mRNA_E-fasciculatus_F_contig10091.97.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10091.97.1
Unique NamemRNA_E-fasciculatus_F_contig10091.97.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Match: D7FUE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE6_ECTSI)

HSP 1 Score: 397 bits (1019), Expect = 2.140e-130
Identity = 209/253 (82.61%), Postives = 222/253 (87.75%), Query Frame = 1
Query:    1 SVIEVTVSDGERTILIDGESYAND-GGDFPATMTGVTLTVTDQNVDMLFPSGLQVNARRWFTDLIYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETIDTGSASVTEGYNYCTSNWQAEVSLLSSPS---GRRLQTSTDEYTAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEASDEFEAEVGAAGGDVCEENTFSSDGLPPCTNCPEGETSGRGAIVCEELSTPSPTVVQAPTPHPTPS 747
            SVIEVTVSDGERTILIDGE+YA D G D PATMTGV LTVTDQNVDMLFPSGLQVNARRWFTD  YIGGVYVYAPL M TVGVLGTNNGN ADDWTDS+GETID GSASV EGYNYCTSNW+AE SLL++ S    RRLQTS  +Y APVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEA +EFE EV AAGGDVCEEN FSSDGL PCT+CP+GETSGRGA+VCE +STPSPTVV+ P   PTP+
Sbjct:  268 SVIEVTVSDGERTILIDGEAYAYDEGDDLPATMTGVALTVTDQNVDMLFPSGLQVNARRWFTDPNYIGGVYVYAPLDMPTVGVLGTNNGNRADDWTDSSGETIDAGSASVAEGYNYCTSNWEAEESLLTTSSRLRSRRLQTS--DYVAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEAGEEFETEVQAAGGDVCEENAFSSDGLSPCTDCPDGETSGRGAVVCEAVSTPSPTVVEEP---PTPN 515          
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Match: D7FTD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD8_ECTSI)

HSP 1 Score: 372 bits (954), Expect = 5.780e-125
Identity = 192/234 (82.05%), Postives = 204/234 (87.18%), Query Frame = 1
Query:    1 SVIEVTVSDGERTILIDGESYA-NDGGDFPATMTGVTLTVTDQNVDMLFPSGLQVNARRWFTDLIYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETIDTGSASVTEGYNYCTSNWQAEVSLLSSPS----GRRLQTSTDEYTAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEASDEFEAEVGAAGGDVCEENTFSSDGLPPCTNCPEGETSGRGAIVCE 687
            SVIEVTVS GERTILIDGE+YA  +G D PATMTGV LTVTDQNVDM FPSGLQVNARRWFTD  YIGGVYVYAPL MSTVGVLGTNNGN  DDWTDSTGETI+ GSAS+ EGYNYCTSNW+AE SLL++PS     R LQTS  +YTA VIPD IPTDVEELCGDNTECIFDAIV GLDVGAATLEA++EF  EV AAGGDVCEENTFSSDGL PCT+CPEGETSGRGA+VCE
Sbjct:   66 SVIEVTVSGGERTILIDGEAYAYGEGDDLPATMTGVALTVTDQNVDMWFPSGLQVNARRWFTDPNYIGGVYVYAPLDMSTVGVLGTNNGNRVDDWTDSTGETIEQGSASIAEGYNYCTSNWEAEESLLTTPSRRLRSRHLQTS--DYTALVIPDAIPTDVEELCGDNTECIFDAIVAGLDVGAATLEAAEEFHTEVQAAGGDVCEENTFSSDGLSPCTDCPEGETSGRGAVVCE 297          
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Match: D7FRS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS1_ECTSI)

HSP 1 Score: 346 bits (887), Expect = 1.070e-109
Identity = 189/245 (77.14%), Postives = 194/245 (79.18%), Query Frame = 1
Query:    1 SVIEVTVSDGERTILIDGESYANDGGDFPATMTGVTLTVTDQNVDMLFPSGLQVNARRWFTDLIYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETIDTGSASVTEGYNYCTSNWQAEVSLLSSPSGR--RLQTSTDEYTAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEASDEFEAEVGAAGGDVCEENTFSSDGLPPCTNCPEGETSGRGAIVCEELSTPSPTVVQAPT 729
            SVIEVTV+DGERTILIDGE YA +GGDFP TMTGVTLTVTDQNVDMLFPSGLQVNARRWFTD  YIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETI TG+AS+ EGYNYCTSNWQ EVSLLSSPS R  RLQTS D+YTAPVIPDVIPTDVEELC DNTECIFDAIVVGLDVGAATLEA DEFE EV AAGG                                 EL TPSPTVVQ PT
Sbjct:  262 SVIEVTVNDGERTILIDGEPYAYEGGDFPETMTGVTLTVTDQNVDMLFPSGLQVNARRWFTDPNYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETIGTGAASIAEGYNYCTSNWQPEVSLLSSPSRRLRRLQTSVDDYTAPVIPDVIPTDVEELCRDNTECIFDAIVVGLDVGAATLEAGDEFETEVEAAGG---------------------------------ELPTPSPTVVQDPT 473          
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Match: A0A6H5JLL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL4_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 3.370e-45
Identity = 106/244 (43.44%), Postives = 141/244 (57.79%), Query Frame = 1
Query:    1 SVIEVT-VSDGERTILIDGESYANDGGDFPATMTGVTLTVTDQNVDMLFPSGLQVNARRWFTDLIYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETIDTGSA--SVTEGYNYCTSNW--QAEVSLLSSPSGRRLQT---STDEYTAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEASDEFEAEVGAAG-GDVCEENTFSSDGLPPCTNCPEGETSGRGAIVCEELSTPS 705
            SVI+ T  + G   + +DGE Y    G    T+TGV L + +  V+M+FPSG++V        ++ I     Y PL ++T G+LG NNGN+ DDW  +  E ++  S   +V EG NYCT+NW    + S+ +   G    T       Y APV+PDVIP  V ELCGDNT C+FDA++ G +VG ATL+  +E  A V   G G +C  NTFSS G PPCT+CP GE SGRGA VC     P+
Sbjct:  563 SVIQATSTASGGLEVWVDGELYDEAAG---TTLTGVALELLEARVEMIFPSGMEVIVLSRTGGILRIDA---YVPLDLATTGLLGNNNGNIGDDWRTADNEIVEFASEHPTVAEGTNYCTTNWCTTEDSSIFTYAEGEDHGTYDLCDVVYVAPVLPDVIPAAVTELCGDNTNCVFDALLAGEEVGEATLK--EEEAARVYQEGLGGLCTTNTFSSTGTPPCTDCPAGEVSGRGAKVCVPQGVPA 798          
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Match: D8LQX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX7_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 1.390e-43
Identity = 103/237 (43.46%), Postives = 135/237 (56.96%), Query Frame = 1
Query:    1 SVIEVTVS-DGERTILIDGESYANDGGDFPAT-MTGVTLTVTDQNVDMLFPSGLQVNARRWFTDLIYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETID--TGSASVTEGYNYCTSNW--QAEVSLLSSPSGRRLQT---STDEYTAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEASDEFEAEVGAAGGDVCEENTFSSDGLPPCTNCPEGETSGRGAIVC 684
            S+I+VT +  G   +L+DGE Y     D  AT + GV L VT   V++ F SGL V        ++ +     YAP++++T G+LG NNG + DD+T   GET+   T S +V EG NYCT+NW   A+ SL +   G    T       Y APV+PD IP  + ELCGDN +CI DA++ G +VG ATLE   E  A      G +C  N+FSS G PPCT CP+GE SG GA  C
Sbjct:  424 SLIQVTTAASGGVEVLVDGELY-----DASATSVIGVALEVTSSRVEISFESGLDVFVSTSINGMLRVNA---YAPVSLATTGLLGNNNGELGDDFTTVDGETVGFATASPTVEEGTNYCTTNWCTTADASLFTYAEGEDHGTFDLCDAVYAAPVLPDAIPASITELCGDNADCIIDALLAGEEVGQATLEGQAEDRAYQEEVAG-LCASNSFSSTGAPPCTTCPDGEVSGTGATAC 651          
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Match: D7G3X5_ECTSI (VWFD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X5_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 5.350e-41
Identity = 99/240 (41.25%), Postives = 134/240 (55.83%), Query Frame = 1
Query:    1 SVIEVTVS-DGERTILIDGESYANDGGDFPATMTGVTLTVTDQNVDMLFPSGLQVNARRWFTDLIYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETID--TGSASVTEGYNYCTSNW--QAEVSLLSSPSGRRLQT---STDEYTAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEASDE---FEAEVGAAGGDVCEENT-FSSDGLPPCTNCPEGETSGRGAIVC 684
            S+I+VT +  G   +L+DGE Y        +++ G+ L VT   V++ F SGL V        ++ +     YAP++++T G+LG NNG + DD+T   GET+   T S +V EG NYCT+NW   A+ SL +   G    T       Y APV+PD IP  + ELCGDN +CI DA++ G +VG ATLE   E   ++ EV      VC     FSS G PPCT CP+GE SG GA  C
Sbjct:   69 SLIQVTTAASGGVEVLVDGELYDASA----SSVIGIALEVTSSRVEISFESGLDVFVSTSINGMLRVNA---YAPVSLATTGLLGNNNGELGDDFTTVDGETVGFATASPTVEEGTNYCTTNWCTTADASLFTYAEGEDHGTFDLCDAVYAAPVLPDTIPASITELCGDNADCIIDALLAGEEVGQATLEGQAEDRAYQEEV------VCARAILFSSTGAPPCTTCPDGEVSGTGATAC 295          
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Match: D7G5D6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D6_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 1.310e-36
Identity = 80/167 (47.90%), Postives = 101/167 (60.48%), Query Frame = 1
Query:  205 VYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETID--TGSASVTEGYNYCTSNW--QAEVSLLSSPSGRRLQT---STDEYTAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEASDEFEAEVGAAGGDVCEENTFSSDGLPPCTNCPEGETSGRGAIVC 684
            V  YAP++++T G+LG NNG + DD+T   GET+   T S +V EG NYCT+NW   A+ SL +   G    T       Y APV+PD IP  + ELCGDN +CI DA++ G +VG ATLE   E  A      G +C  N+FSS G PPCT CP+GE SG GA  C
Sbjct:    4 VNAYAPVSLATTGLLGNNNGELGDDFTTVDGETVGFATASPTVEEGTNYCTTNWCTTADASLFTYAEGEDHGTFDLCDAVYAAPVLPDTIPASITELCGDNADCIIDALLAGEEVGQATLEGQAEDRAYQEEVAG-LCASNSFSSTGAPPCTTCPDGEVSGTGATAC 169          
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Match: A0A1Z5KFB0_FISSO (VWFD domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFB0_FISSO)

HSP 1 Score: 60.1 bits (144), Expect = 1.010e-6
Identity = 61/206 (29.61%), Postives = 94/206 (45.63%), Query Frame = 1
Query:   46 IDG-ESYANDGGDFPATMTGVTLTVTDQNVDMLFP-SGLQVNARRWFTDLIYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGETI---DTGSASVTE-GYNYCTSNW---QAEVSLL---------------SSPSGRRLQTSTDEYTAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEASDEFEAEVGAAGGD 591
            +DG +   N G   PA    V +T    N+++L+  S ++V     + +  YI  V  Y P   + VG+LG+ +GN A+DWT  TG  +   D+  A + + GY+YCT NW     E SL                + P G  ++   ++  A ++         E CG N +CI DA + GL+   ATL +     A    AGG+
Sbjct:  235 VDGVQRDLNAGSGNPA----VQVTYKGPNIEVLYTKSKMKVTVNIGWAEGCYIN-VCAYVPNTDTMVGLLGSADGNNANDWTTPTGTILPIPDSLQARMGKAGYDYCTKNWCIRNEEDSLFVHAENGVEFSDLMKCNLPFGDTMEEYLEKVDASIL---------EFCGRNLQCITDAQLSGLESAKATLTSQAALAATCNTAGGE 426          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10091.97.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FUE6_ECTSI2.140e-13082.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTD8_ECTSI5.780e-12582.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRS1_ECTSI1.070e-10977.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLL4_9PHAE3.370e-4543.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQX7_ECTSI1.390e-4343.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3X5_ECTSI5.350e-4141.25VWFD domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G5D6_ECTSI1.310e-3647.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1Z5KFB0_FISSO1.010e-629.61VWFD domain-containing protein n=2 Tax=Fistulifera... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10091contigE-fasciculatus_F_contig10091:2439..5038 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score402.9
Seed ortholog evalue1.1e-109
Seed eggNOG ortholog2880.D7FUE6
KEGG koko:K22017
EggNOG free text desc.Sushi, nidogen and EGF-like
EggNOG OGsKOG4157@1,KOG4157@2759,KOG4291@1,KOG4291@2759
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Exons5
Model size759
Cds size756
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10091.97.1prot_E-fasciculatus_F_contig10091.97.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10091 2439..5037 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927510.848012-CDS-E-fasciculatus_F_contig10091:2438..27231622927510.848012-CDS-E-fasciculatus_F_contig10091:2438..2723Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10091 2439..2723 +
1695995571.3696887-CDS-E-fasciculatus_F_contig10091:2438..27231695995571.3696887-CDS-E-fasciculatus_F_contig10091:2438..2723Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10091 2439..2723 +
1622927510.8613892-CDS-E-fasciculatus_F_contig10091:3488..36741622927510.8613892-CDS-E-fasciculatus_F_contig10091:3488..3674Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10091 3489..3674 +
1695995571.3792405-CDS-E-fasciculatus_F_contig10091:3488..36741695995571.3792405-CDS-E-fasciculatus_F_contig10091:3488..3674Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10091 3489..3674 +
1622927510.8721862-CDS-E-fasciculatus_F_contig10091:4211..43291622927510.8721862-CDS-E-fasciculatus_F_contig10091:4211..4329Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10091 4212..4329 +
1695995571.3865683-CDS-E-fasciculatus_F_contig10091:4211..43291695995571.3865683-CDS-E-fasciculatus_F_contig10091:4211..4329Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10091 4212..4329 +
1622927510.8807561-CDS-E-fasciculatus_F_contig10091:4484..45831622927510.8807561-CDS-E-fasciculatus_F_contig10091:4484..4583Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10091 4485..4583 +
1695995571.3943067-CDS-E-fasciculatus_F_contig10091:4484..45831695995571.3943067-CDS-E-fasciculatus_F_contig10091:4484..4583Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10091 4485..4583 +
1622927510.8905425-CDS-E-fasciculatus_F_contig10091:4969..50371622927510.8905425-CDS-E-fasciculatus_F_contig10091:4969..5037Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10091 4970..5037 +
1695995571.4020905-CDS-E-fasciculatus_F_contig10091:4969..50371695995571.4020905-CDS-E-fasciculatus_F_contig10091:4969..5037Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10091 4970..5037 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10091.97.1

>prot_E-fasciculatus_F_contig10091.97.1 ID=prot_E-fasciculatus_F_contig10091.97.1|Name=mRNA_E-fasciculatus_F_contig10091.97.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=252bp
SVIEVTVSDGERTILIDGESYANDGGDFPATMTGVTLTVTDQNVDMLFPS
GLQVNARRWFTDLIYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGE
TIDTGSASVTEGYNYCTSNWQAEVSLLSSPSGRRLQTSTDEYTAPVIPDV
IPTDVEELCGDNTECIFDAIVVGLDVGAATLEASDEFEAEVGAAGGDVCE
ENTFSSDGLPPCTNCPEGETSGRGAIVCEELSTPSPTVVQAPTPHPTPSV
TP
back to top

mRNA from alignment at E-fasciculatus_F_contig10091:2439..5038+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10091.97.1 ID=mRNA_E-fasciculatus_F_contig10091.97.1|Name=mRNA_E-fasciculatus_F_contig10091.97.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2600bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10091:2439..5038+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TCGGTCATCGAGGTCACCGTAAGCGACGGCGAGCGGACCATCCTGATCGA CGGAGAGTCGTATGCGAACGACGGAGGAGACTTCCCCGCAACCATGACCG GGGTGACGCTCACGGTCACCGACCAGAACGTGGACATGCTGTTTCCCTCG GGGTTGCAGGTGAACGCCAGGCGTTGGTTCACCGATCTGATTTACATCGG TGGCGTCTATGTGTACGCACCCCTTGCCATGTCTACGGTCGGCGTTCTCG GCACCAATAATGGGAACATGGCCGATGATTGGACGGTGAGAACAGCGTTG GTAGATGAACAGCCAGATTTATATGGGGATCAGTTGGTGGCGATATTTCA AACAGCGCAGATATTTCGCGGTGAGCCTGTAGCGACGGGAATCCTTTGGT GTACTAGTTGGGCTGCCCAACCATTAATCGCGAGGGTGCATGCCGTGCAG ATCGTTGTTTTAGACGCATGGGTGCATCGAGTCGTGGTTAGGTTATGAAT CCACAACGACTGAGCGCGGCACACAAACCGCAAATTTCTGGCTGCCCAAA GCAAAGCACGGACGTCGGGTATCGAGTTGACCCTGAGTCGTCTGCTCTGT TCATCGTCATCTCCGGTTTCCAACCACTTCGTTCGGGTGGCGGGACATGC TCACAATAGCCAGTCACTACCGGCGACCGAAACGCTAATTTTCCAGTCTA GACACGGCCGTTGTTCTACATGTGAATACACGAGTCCCTATGTGTATTGC CTTTTCCGGTGTGCATTTTACGCGTTGTTTGTATTGTTGACACATAAGAA CGAATTACGTTTCTGAATAACCTGCACGAGGTCTTTCCGACAAACTAGGT TGCCTCCCACACGGCGGTCGCTCTCTCTCTCTGTTTTCAAGAGATCAACC GTTTCGGGGACAAACTGCGGCCGAGCCCCCATGCCAAGTAGCGGTATATT CCCTCTCATATCAACACTGCCCGACTTTGTGAAGGCTTCAGTGCCCTCCA GCACAGTCCCTCATCATTTCCGACCACCTCAATTGGTTCCCCTCTCGCAG GATTCCACGGGCGAGACGATCGATACGGGGTCGGCGTCCGTCACCGAAGG GTACAACTACTGCACATCCAACTGGCAAGCAGAAGTCAGTCTGCTTTCAT CTCCCTCGGGCCGCCGCTTGCAAACCAGCACCGACGAATATACCGCGCCG GTGATCCCAGACGTCATCCCCACCGATGTGGAAGAGGTACGTATACACGT TGTGGATGATTCTTGACCAAGCTTAGGTTCACGCACAGTGCATGCAGAGC TCAGCCCCGAAGCTGCTTGAAAATGATTAGGTTGACCCCGAACTTAGTCG GTTCATCGCCCGCAACAGCCGTCTGCTAATAGCAATGTTTGTTCTGCGTT CTCCACATGTGAGGCATGGGTCCGTTGATGGACAGGGAGAGTTCTGGAGA ACCCACGTTCCTCCCTTTCCCGAGCGTCGCTCGAACACCATCGAATTAGA GCTTTGTCCCTGCTTTCGTGGGGCGTAGTCGAGATCGCACCCGGCGATGG CCATGACGTTTCATCATAGAGAACGATTGGCGTACGTAAGACCTGCTCCC CTATGTCGAAGTGATCTCGTTGTTGGTTCAGGACATTGCCAGCCGTTCGT AGCGAGTACGATTTGCGCTTCGTCTTGCATTGATTTCTATGGACATTGCT ATTTGGGGAACCCCGTTCCATCCAAGATCGATCATCCACTGCTGTTGTCC GTCGCCGATGCGATTCCGAACAGCTGTGTGGAGACAACACCGAGTGCATC TTCGACGCAATCGTCGTGGGTCTGGATGTGGGAGCTGCCACCCTTGAAGC CAGCGACGAGTTCGAGGCGGAGGTTGGAGCGGCGGGGGGTGGTAAGCTGC ACCATTAGCTATTCATTTTGCCTGCCGGCGGCGGTGTCGAAGACTGTCCC TTTCCGCATACTTCGCACATGCTTGTCGCCCCACTATTCGCCAATATGAC CTCATCACCTCTCTCTCTTCCCTCTGTGCGGCATGTGACACATTAGACGT TTGCGAAGAAAACACCTTCAGCAGCGACGGCTTGCCCCCGTGCACCAACT GCCCAGAGGGGGAAACCTCCGGCCGTGGCGCCATCGTGTGTGAAGGTATA CTACCATTGAAAGCGTTTTCATACCACGCACAGGTCGTATCAAAGAATGA CGATTTGTTCTCGTAAACTTCGATTCGTAGCCCGCCACCTTACGTTGCAG TAGAAAATGCTCCAAGACGAGGGAATTCGGGCTCACAGCTTCCCAAGTAG TGTCCAACGTCTACACCATACTCAAAGATCCCCACCTTGATGGGCTACTT TGGTTGGCTGCAAGATCATCAAGTCTACCGCTAAAACTGGAGTATCGATT GAAACGCATGTATAGCTGCCGTGATGATCATCCAGCAACGTGTTTGCTGC TAATGGTTGCGATCGATTGACTCGTTCCGATTCCCCCCCTTGCGGACCCG CCTGGTTTTTTCCCGGCCACTGTTTATGCAGAGCTTTCGACGCCTAGCCC CACTGTCGTTCAAGCCCCTACTCCCCACCCCACGCCCAGCGTCACTCCGA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10091:2439..5038+

>mRNA_E-fasciculatus_F_contig10091.97.1 ID=mRNA_E-fasciculatus_F_contig10091.97.1|Name=mRNA_E-fasciculatus_F_contig10091.97.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1512bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10091:2439..5038+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TCGGTCATCGAGGTCACCGTAAGCGACGGCGAGCGGACCATCCTGATCGA
CGGAGAGTCGTATGCGAACGACGGAGGAGACTTCCCCGCAACCATGACCG
GGGTGACGCTCACGGTCACCGACCAGAACGTGGACATGCTGTTTCCCTCG
GGGTTGCAGGTGAACGCCAGGCGTTGGTTCACCGATCTGATTTACATCGG
TGGCGTCTATGTGTACGCACCCCTTGCCATGTCTACGGTCGGCGTTCTCG
GCACCAATAATGGGAACATGGCCGATGATTGGACGTCGGTCATCGAGGTC
ACCGTAAGCGACGGCGAGCGGACCATCCTGATCGACGGAGAGTCGTATGC
GAACGACGGAGGAGACTTCCCCGCAACCATGACCGGGGTGACGCTCACGG
TCACCGACCAGAACGTGGACATGCTGTTTCCCTCGGGGTTGCAGGTGAAC
GCCAGGCGTTGGTTCACCGATCTGATTTACATCGGTGGCGTCTATGTGTA
CGCACCCCTTGCCATGTCTACGGTCGGCGTTCTCGGCACCAATAATGGGA
ACATGGCCGATGATTGGACGGATTCCACGGGCGAGACGATCGATACGGGG
TCGGCGTCCGTCACCGAAGGGTACAACTACTGCACATCCAACTGGCAAGC
AGAAGTCAGTCTGCTTTCATCTCCCTCGGGCCGCCGCTTGCAAACCAGCA
CCGACGAATATACCGCGCCGGTGATCCCAGACGTCATCCCCACCGATGTG
GAAGAGGATTCCACGGGCGAGACGATCGATACGGGGTCGGCGTCCGTCAC
CGAAGGGTACAACTACTGCACATCCAACTGGCAAGCAGAAGTCAGTCTGC
TTTCATCTCCCTCGGGCCGCCGCTTGCAAACCAGCACCGACGAATATACC
GCGCCGGTGATCCCAGACGTCATCCCCACCGATGTGGAAGAGCTGTGTGG
AGACAACACCGAGTGCATCTTCGACGCAATCGTCGTGGGTCTGGATGTGG
GAGCTGCCACCCTTGAAGCCAGCGACGAGTTCGAGGCGGAGGTTGGAGCG
GCGGGGGGTGCTGTGTGGAGACAACACCGAGTGCATCTTCGACGCAATCG
TCGTGGGTCTGGATGTGGGAGCTGCCACCCTTGAAGCCAGCGACGAGTTC
GAGGCGGAGGTTGGAGCGGCGGGGGGTGACGTTTGCGAAGAAAACACCTT
CAGCAGCGACGGCTTGCCCCCGTGCACCAACTGCCCAGAGGGGGAAACCT
CCGGCCGTGGCGCCATCGTGTGTGAAGACGTTTGCGAAGAAAACACCTTC
AGCAGCGACGGCTTGCCCCCGTGCACCAACTGCCCAGAGGGGGAAACCTC
CGGCCGTGGCGCCATCGTGTGTGAAGAGCTTTCGACGCCTAGCCCCACTG
TCGTTCAAGCCCCTACTCCCCACCCCACGCCCAGCGTCACTCCGAGCTTT
CGACGCCTAGCCCCACTGTCGTTCAAGCCCCTACTCCCCACCCCACGCCC
AGCGTCACTCCG
back to top