mRNA_E_fasciculatus_S2_contig9924.17918.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9924.17918.1
Unique NamemRNA_E_fasciculatus_S2_contig9924.17918.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGU9_ECTSI)

HSP 1 Score: 404 bits (1039), Expect = 6.340e-138
Identity = 202/205 (98.54%), Postives = 204/205 (99.51%), Query Frame = 1
Query:    1 ADLEHTMTRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGDDGEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKALAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR 615
            ADLEHTMTRDEVFRRL+ILAVGLNVTFVLWGVLQERILKGEYGD GEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKALAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILG+KEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR
Sbjct:  165 ADLEHTMTRDEVFRRLIILAVGLNVTFVLWGVLQERILKGEYGD-GEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKALAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGNKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR 368          
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: UAA (transporter family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEU6_9STRA)

HSP 1 Score: 285 bits (730), Expect = 2.510e-91
Identity = 147/210 (70.00%), Postives = 166/210 (79.05%), Query Frame = 1
Query:    1 ADLEHTMTRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGDDGEHFTYS-----YGLVFMNRFLGFLFSAGMMHYTRPKWSKALAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR 615
            AD E    R EV ++L  L +GLNVTFVLWGVLQERILK EYG  G+ FTY      YGLVF NR LG LFS GM++YTRP WSKALAYEYS P+V+NMLSSWCQYEALK+VTFPTQVLSK+FKI PIM+MG++LG+K YP YDY VAG I LG+ LF+ SSEG+  G D FGQQ    +V CG+MLL LYLVFDSFTSQWQSRMFTKHR
Sbjct:  158 ADDEVLPPRSEVIKKLAGLGLGLNVTFVLWGVLQERILKMEYGQ-GDFFTYRQAARFYGLVFTNRALGLLFSGGMLYYTRPTWSKALAYEYSLPSVTNMLSSWCQYEALKFVTFPTQVLSKAFKIAPIMLMGRMLGNKSYPLYDYCVAGTIGLGVALFVTSSEGLRLGADSFGQQ---GAVGCGIMLLGLYLVFDSFTSQWQSRMFTKHR 363          
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y164_HETAK)

HSP 1 Score: 246 bits (629), Expect = 1.710e-76
Identity = 122/201 (60.70%), Postives = 158/201 (78.61%), Query Frame = 1
Query:   16 TMTRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGDDGEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKW-SKALAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR 615
            T +R EV +RL++  +GLN++F+ WGVLQER+L   Y   GE FTYSY LVF NR  G + SAG++++ +P   ++A+ YEYSFP+VSNMLSSWCQYEALKYVTFPTQ+LSK FK+VPIMVMGK++G+K YP YDYVVA VI LGI++FL S+EG+D G D  G+ E  S    G++LL L+LVFDSFTSQWQ+RMF +++
Sbjct:  178 TSSRGEVLQRLLVSVLGLNLSFLAWGVLQERMLTQTY--QGEFFTYSYMLVFTNRLGGLVLSAGLLYFFKPPIETRAMIYEYSFPSVSNMLSSWCQYEALKYVTFPTQMLSKCFKLVPIMVMGKVMGNKSYPMYDYVVAAVIGLGISVFLMSTEGLDLGRDATGEAESASGTYTGVLLLGLFLVFDSFTSQWQTRMFDRNK 376          
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BZ86_9STRA)

HSP 1 Score: 233 bits (594), Expect = 6.330e-73
Identity = 115/196 (58.67%), Postives = 148/196 (75.51%), Query Frame = 1
Query:   25 RDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGDDGEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKALAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKH 612
            + +V  RL   AVGLNV+F++WG+LQER+L   Y  +GE+F+ SYGLVF+NR  GF+ S  M++  +P  + A+ YE+SFP+VSNMLSSW QYEALKYV+FPTQ+L K FK+VPIM+MGK LG+K YP YDYVV  +I  GI +F+ S+E ++FGTD  G  E  S   CGMMLL  +LVFDSFT QWQSRMF++H
Sbjct:    1 KKQVLGRLFNCAVGLNVSFLVWGILQERMLTRPY--NGEYFSSSYGLVFLNRLGGFIISGIMLYAFKPPHTSAVVYEFSFPSVSNMLSSWTQYEALKYVSFPTQMLFKCFKLVPIMLMGKFLGNKSYPAYDYVVCFMIGFGIAIFMVSTEDMEFGTDSIGTPETWSGTICGMMLLCFFLVFDSFTGQWQSRMFSRH 194          
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Hypothetical (protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CE74_9STRA)

HSP 1 Score: 233 bits (594), Expect = 2.660e-71
Identity = 114/196 (58.16%), Postives = 148/196 (75.51%), Query Frame = 1
Query:   16 TMTRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGDDGEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKALAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMF 603
            TMT+  V  RL    +GLNV+F++WGVLQER+L   Y +DGE+F+ SYGLVF+NR  GF+ S  M++  +P  ++A+ YE+SFP+VSNMLSSWCQYEALKY++FPT +L K FK+VPIM+MGK LG+K YP YDYVV+ +I  GI LF+ S+E ++FG D  G  E  S   CG+MLL  +L+FDSFT QWQSRMF
Sbjct:  134 TMTKKGVLNRLAFCVMGLNVSFLIWGVLQERMLTQPY-NDGEYFSSSYGLVFLNRLGGFIISGLMLYAFKPPHTEAIIYEFSFPSVSNMLSSWCQYEALKYISFPTAMLFKCFKLVPIMLMGKYLGNKTYPAYDYVVSLLIGFGIALFMISTEDMEFGMDSIGTPETWSGTMCGLMLLGFFLLFDSFTGQWQSRMF 328          
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VXV3_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.850e-68
Identity = 111/204 (54.41%), Postives = 151/204 (74.02%), Query Frame = 1
Query:   10 EHTMTRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGD-DGEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKA-LAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR 615
            + TM++ EV RRL    + LN+TFV WGVLQER+L   Y    GE FTYSY LVF NRF   + S  M+ Y +P+ S++ + YEYSFP++SNM+SSWCQYEAL+YV+FP   L KSFK+ P+M+MGKILG+K YP YDY+VA +I +GIT+F++ ++ + FG D++G +  G+    G+MLL  +L+FD+FTSQWQSRMF +HR
Sbjct:  198 QETMSKTEVLRRLAFCTLMLNITFVTWGVLQERMLTRRYPRWTGEFFTYSYALVFTNRFWTLIMSGLMLLYFKPRRSRSTVIYEYSFPSISNMMSSWCQYEALRYVSFPATTLFKSFKLGPVMIMGKILGNKSYPQYDYIVAVMIGVGITMFMSETDNLSFGHDIYGAEASGTWT--GVMLLFFFLLFDAFTSQWQSRMFQRHR 399          
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIR8_9STRA)

HSP 1 Score: 228 bits (580), Expect = 2.130e-68
Identity = 116/204 (56.86%), Postives = 151/204 (74.02%), Query Frame = 1
Query:   10 EHTMTRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGD-DGEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKA-LAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR 615
            + T +R  V +RL    + LNVTFV WGVLQER+L   Y    GE+FTYSY LVF NRF   L S  ++ Y +P+ S+  + YEYSFP+++NMLSSWCQYEAL+YV+FP   L KSFK+ P+M MGKILG+K YP YDY VA VIA+GIT+F++SS+ ++FG D+ G  ++ S V  G+ML++L+L FDSFTSQWQSRMF +HR
Sbjct:  211 QETASRQSVLKRLSFCVLMLNVTFVTWGVLQERMLTRRYPRFTGEYFTYSYALVFTNRFWTLLMSGALLLYLKPRTSRTTVLYEYSFPSITNMLSSWCQYEALRYVSFPAVTLFKSFKLAPVMAMGKILGNKSYPQYDYFVALVIAVGITMFMSSSDDLEFGYDVHG--DRASEVWTGIMLMSLFLFFDSFTSQWQSRMFQRHR 412          
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRX1_9STRA)

HSP 1 Score: 225 bits (573), Expect = 4.420e-68
Identity = 116/203 (57.14%), Postives = 144/203 (70.94%), Query Frame = 1
Query:   22 TRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGDDGEHFTYSYGLVFMNRFLGFLFSA---GMMHYTRPKWSKALAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHRVS 621
            T+ EV R L+    GL  +F++WG+LQER+L   Y + GE+FTYSYGLVF NR    + S+    M  +     S A  YEYSFP+VSNMLSSWCQYEAL YVTFPTQ LSKSFK+VPIM+MG++L +K YP Y+Y  A  I LG TLF+ ++E ++ G D FGQ E  S   CG+MLL L+L FDSFTSQWQSRMF+KH +S
Sbjct:  162 TKGEVLRTLLFCTAGLICSFLVWGILQERMLTMPYRN-GEYFTYSYGLVFTNRLFSLILSSILVWMYEWESLTLSSAPLYEYSFPSVSNMLSSWCQYEALAYVTFPTQTLSKSFKLVPIMLMGRMLTNKRYPLYEYATAISIGLGNTLFMMATENLELGVDSFGQVEDKSGTWCGVMLLLLFLFFDSFTSQWQSRMFSKHEIS 363          
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Hypothetical (protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZJK7_9STRA)

HSP 1 Score: 225 bits (574), Expect = 1.620e-67
Identity = 113/204 (55.39%), Postives = 152/204 (74.51%), Query Frame = 1
Query:   10 EHTMTRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGD-DGEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKA-LAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR 615
            + T +R  V + L   ++ LN+TFV WG+LQER+L   Y    GE+FTYSY LVF NRF   + S  +  Y +P+WS++ + YEYSFP++SNMLSSWCQYEAL+YV+FP   L KSFK+ P+M MGK+LG+KEYP YDY VA VI +G+ +F++S+EGV+FG D++G  E+ S+   G+ML+ L+L FDSFTSQWQSRMF +HR
Sbjct:  210 QSTTSRATVLKTLTGCSLMLNLTFVTWGLLQERMLTRRYPRITGEYFTYSYALVFTNRFWTLIMSGLLFFYFKPRWSRSTVIYEYSFPSISNMLSSWCQYEALRYVSFPAVTLFKSFKLAPVMAMGKLLGNKEYPQYDYFVALVIGIGLAMFMSSTEGVNFGYDVYG--EEVSATWTGIMLMFLFLFFDSFTSQWQSRMFQRHR 411          
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NEH4_9STRA)

HSP 1 Score: 225 bits (574), Expect = 4.980e-67
Identity = 114/207 (55.07%), Postives = 153/207 (73.91%), Query Frame = 1
Query:    4 DLEHTMT-RDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGD-DGEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKA-LAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR 615
            + E  +T +  V +RL    + LN+TFV WGVLQER+L  +Y    GE+FTYSY LVF NR    + S G++ Y +P+WS++ + YEYSFP++SNMLSSWCQYEAL+YV+FP   L K+FK+ P+M MGKILG+KEYP YDYVVA VI +G+T+F++S++ + FG D++G  E+ S+   G+MLL  +L FDSFTSQWQSRMF  HR
Sbjct:  262 EFEQRLTSKTSVLQRLAFCVIMLNLTFVAWGVLQERMLTRKYPRLTGEYFTYSYALVFTNRCWTVIMSGGLLMYLKPRWSQSTVIYEYSFPSISNMLSSWCQYEALQYVSFPAVTLFKAFKLAPVMAMGKILGNKEYPQYDYVVALVIGVGLTMFMSSTDDLHFGYDIYG--EEASATWTGVMLLFFFLFFDSFTSQWQSRMFQHHR 466          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized6.340e-13898.54protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGU9... [more]
UAA2.510e-9170.00transporter family-domain-containing protein n=1 T... [more]
Hypothetical1.710e-7660.70protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Hypothetical6.330e-7358.67protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Hypothetical2.660e-7158.16protein n=2 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Hypothetical1.850e-6854.41protein (Fragment) n=1 Tax=Grammatophora oceanica ... [more]
Hypothetical2.130e-6856.86protein n=1 Tax=Attheya septentrionalis TaxID=4202... [more]
Uncharacterized4.420e-6857.14protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
Hypothetical1.620e-6755.39protein n=2 Tax=Ditylum brightwellii TaxID=49249 R... [more]
Hypothetical4.980e-6755.07protein n=2 Tax=Odontella aurita TaxID=265563 RepI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9924contigE_fasciculatus_S2_contig9924:822..5439 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score392.9
Seed ortholog evalue9.1e-107
Seed eggNOG ortholog2880.D7FGU9
Preferred nameSLC35B2
Model size627
KEGG koko:K15276
KEGG TC2.A.7.11.2,2.A.7.11.3
Hectar predicted targeting categorysignal anchor
GOsGO:0000003,GO:0000139,GO:0000295,GO:0003002,GO:0003006,GO:0003674,GO:0005215,GO:0005346,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0006029,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007310,GO:0007389,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009798,GO:0009950,GO:0009953,GO:0009987,GO:0009994,GO:0012505,GO:0015012,GO:0015075,GO:0015215,GO:0015216,GO:0015605,GO:0015711,GO:0015748,GO:0015865,GO:0015868,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022857,GO:0030154,GO:0030166,GO:0030173,GO:0030176,GO:0030201,GO:0031090,GO:0031224,GO:0031227,GO:0031228,GO:0031300,GO:0031301,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034035,GO:0034036,GO:0034220,GO:0034641,GO:0034645,GO:0034654,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046390,GO:0046483,GO:0046963,GO:0046964,GO:0048468,GO:0048469,GO:0048477,GO:0048599,GO:0048609,GO:0048856,GO:0048869,GO:0050427,GO:0050428,GO:0051179,GO:0051234,GO:0051503,GO:0051704,GO:0055085,GO:0055086,GO:0071702,GO:0071704,GO:0071705,GO:0072348,GO:0072521,GO:0072522,GO:0072530,GO:0090407,GO:0098588,GO:0098656,GO:0098791,GO:0098827,GO:1901135,GO:1901137,GO:1901264,GO:1901293,GO:1901360,GO:1901362,GO:1901505,GO:1901564,GO:1901566,GO:1901576,GO:1901679,GO:1901682,GO:1902559
Exons5
EggNOG free text desc.UDP-galactose transmembrane transporter activity
EggNOG OGsCOG0697@1,KOG1581@2759
Cds size609
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9924.17918.1prot_E_fasciculatus_S2_contig9924.17918.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9924 822..5421 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842634.9393451-CDS-E_fasciculatus_S2_contig9924:821..9861696842634.9393451-CDS-E_fasciculatus_S2_contig9924:821..986Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9924 822..986 -
1696842634.953615-CDS-E_fasciculatus_S2_contig9924:2462..25881696842634.953615-CDS-E_fasciculatus_S2_contig9924:2462..2588Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9924 2463..2588 -
1696842634.9690876-CDS-E_fasciculatus_S2_contig9924:3019..31221696842634.9690876-CDS-E_fasciculatus_S2_contig9924:3019..3122Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9924 3020..3122 -
1696842634.9813318-CDS-E_fasciculatus_S2_contig9924:4036..41671696842634.9813318-CDS-E_fasciculatus_S2_contig9924:4036..4167Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9924 4037..4167 -
1696842634.9920516-CDS-E_fasciculatus_S2_contig9924:5337..54211696842634.9920516-CDS-E_fasciculatus_S2_contig9924:5337..5421Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9924 5338..5421 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842635.0032847-UTR-E_fasciculatus_S2_contig9924:5421..54391696842635.0032847-UTR-E_fasciculatus_S2_contig9924:5421..5439Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9924 5422..5439 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9924.17918.1

>prot_E_fasciculatus_S2_contig9924.17918.1 ID=prot_E_fasciculatus_S2_contig9924.17918.1|Name=mRNA_E_fasciculatus_S2_contig9924.17918.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=203bp
MTRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGDDGEHFTYSYGLV
FMNRFLGFLFSAGMMHYTRPKWSKALAYEYSFPAVSNMLSSWCQYEALKY
VTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNS
SEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHRV
SE*
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mRNA from alignment at E_fasciculatus_S2_contig9924:822..5439-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9924.17918.1 ID=mRNA_E_fasciculatus_S2_contig9924.17918.1|Name=mRNA_E_fasciculatus_S2_contig9924.17918.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4618bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9924:822..5439- (Ectocarpus fasciculatus EfasUO2)
GCGGACCTCGAGCACACCATGACGAGGGACGAGGTGTTCCGACGACTGGT CATCCTCGCGGTGGGGCTTAACGTGACGTTCGTGCTGTGGGGGGTGCTGC AGGTCAGTCCAAGAAACTCTCTACTGTTGTTATTTTTTTTAATTTTGTTT TTATAACAGTCGGTCCTTGACGACCTTACTTTCGGGTGGATAGATTGTCG TCCTCCGTTTTTTCTCTGCTTTTGTGGTCGTACGTTGGAAACTCGTGGGT AGGCGTTTCTCAACTTGAGCCGTTTTATACTCGAGCGCGGTCGGTCCGCC TGTCGTGTTTTGACAACGTTGTCAGTGGTTAAATGTCGGGGATCGGTTTC GTCCACCGTTTTTTCTCTGCTTTTTGTCTTATCCTTGGAACCCCGTGTGT GGGCGTTGCTCCCTTGGCCGTTTCATACTCAAGCGCGGTCGGTTGGCCTG TCTTCTTTCACGACGTCGTCGGTGGAGGTTGATGGCGGGGGTCGGTTTTC GTCCGCCGATTTGTGTTTCTTTCCTACCTTTGGAAACCCGTAGGTGGGCG TTGCTCAACTTTTACCGTTTCATATTCAAGCGACCGGTCGTCTATGACAT GGTCGGTGGATCGGTTTGCGTTCACCTCCTCTTCGGTTTTATCTGTTACT GGAAACCCGTGGGTGGGCGTGTCTCAGCGTGGGCCGTTTCATGAGTGCGG TGTGGCGCCTGTGTTTGCAAGCTGTGGCTACTGCCGGGATCTTTTTGGAT GTGACGGAATGCCTGTACATGCACCATCTCTTGGACAAGCCTGGGAGTCT TGTAGTGTGTGTGATTGTTTTATTTGTTGGAGGTTTTACAGCAGACCGCT GAAGATCGTTAGATCATTCGTGTGTTGCGGCGTTCATTTTGGGCAATAAC TGACACGGGTGTGGTTGTACTTTTCTCTTCCTGCCTGCTTGCCTGTCTGT CTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCT GTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTGCCTCTTTGCTCTCTG TGTCTCTTTGCTCTCTGTGTCTCTTTGCTCTCTGTGTCTCTTTGCTCTCT GTGTCTCTTTGCTCTGTGTCTCTTTGCTCTCTGTGTCTCTTTGCTCTCTG TGTCTCTCTGCGTCCCTCTCTCTTTCTCTCTCTTCGTCTCTGTCTGCGTC TTCGTCTGTCTCTTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTACGTCG TGTTGCTTTGGGACTCCCTCAGGAACGCATCTTGAAGGGTGAGTACGGTG ACGACGGCGAGCACTTTACCTACTCGTACGGGCTCGTGTTCATGAACCGC TTCCTCGGCTTCTTGTTCTCCGCCGGAATGATGCACTACACAAGGCCCAA GTGGTGAGCCGCAGGAAGAAGCGTGTTTTTTCGAGTCAGCGTACCCTTCC CAAACGTGATTTTTCGAGTCATTGCACCCTTGCTAACAGTCGGGATCTTT GTGTACCTCGATTTTCTCCACGACCTAAAAAGAAAAAGAAAAGAAAAGAA AGTGTCGAAAAGGGAGGCTTTGTCAGTACCACCTCTCTGTTGGGTACCAA TCGATCGAGCTAGGAAAGTCGGGCTAGGCGATGGGCGCGGTCACCCCCAT GATTGCGGTACGCGGGAATGAGACACACACGCAGACCCCAGCTGAACACA TGGCCTTGACAGCACCACGGTTCATTTCGGATCGGTTTTCCTTTCCTTTG CTGAGGTGGCTGAGCGATGCTTGTCGCTCTGAGTACTGTAGCCCCCGTTT TGCCCGCTTGAGGACAACGGAAGCATCGGCCCTGTTTAAAGGGTTTCTAA CTTTTTGTCGACGGGTTAGGTTGAGGGTTTAGGAAGGCTTCGGCGCCGTT CTGGAGGACGTTTCTCTTTTGGGGATCAATCATATTCTCTCTCTTCATGT TGTGTATTCCGTGAGTTCTTGTACCTACCTGTGCACTTCTCGCGACACCG GACGTAGTTACGCCCGGCGAGCAGGTTTGAAGTCAATACCGCTTCTACAT AAGTTGTCTCAGATTCAACCGACCGTGTGGTCTGGCTGTTTCTCAGGCGA AGGCCTCCGATCGGGGGGTCCGCAGGCCTATGCGGATGGTAACCAACGTG CATGAAACAGCCCAAGAATAAACAACGTCAGCATGCTACGTGCATGTTCA GCCTCAACACCGCATATCACATCCTCTCACGTGCTCTATTTTCGGCCTGG ACACTCGGCCATTCTCTCATGTGATCTGCGATGTATCTTCTGGGTTGTGC TGTCGACATTCCCATAGGTCGAAGGCTCTGGCCTACGAGTACTCCTTCCC GGCTGTTTCGAACATGCTCAGCTCGTGGTGTCAGTACGAGGCGCTCAAGT ACGTCACCTTCCCGACTCAGGTTAGTTTGTTGGTTTGGTGACGTGTGTCT TTGTGTCTTTGTGTTGTGATTGGGCTTTTGCTGTCGTCTTCATCGCCCGT CGTTCTTGATGGGTGCTTTTCGTGCTTTACGTGGTCGCTTGTTGTTGTTG TTGTTGTTGTTGTTGTTGTTGTTGTTGATTCCCCACAGTCCATGTTCCTG GGGAGCATACACCCTGGTTCTACGCTCATGTCGTGTGTAGTCCCATGGCA GCTAGCTTTGGTTGCGGTTCGATTAGCGGATGCTTCCTCTAATCAAGGGT TTGCTTTTGGTTGGGGATTAAAACAGTTGCTACGGAAAGGAGGGCCTTCT ATTTCTCTTCACGTTGTTGATGAAATCGTGTGCGTCCCTCTCTTTTTCCC TTTTATTCTCTTTTTTTCGTTTCTCCTCTTTTTTTTCGTGGGACCAAACA GGTTTTGTCGAAGAGCTTCAAGATCGTGCCCATCATGGTCATGGGGAAGA TTCTCGGAAGCAAGGAGTACCCTTTCTACGACTACGTTGTGGCAGGCGTT ATCGCTCTGGGCATCACTCTTTTCCTGGTGCGTTGTCGCAGAATATCTGG CCTCCTGGTGTTTTATAAAGTTTTTTTTTTATTTCTTCCCCCGGAATAAC GCCGCCGTAGTATCGTCGCCCCTGCTACATAGATGTTAGTTTGCGTGGAT GAATTTCGTGCTGACAGTGAGGGTGTTTTGAGATGTGTACCATGGAGCCC AAACCGTGCCACTGCCCGAAGGGTGAATAGCATAATGTGTGCGTGGTCGG TGGGTACAGTATTGCGCGGTATTCTGGACGGCTGGTTGTACACAGCAGAG CCGCGGCAAAACGACGTCCGCAACGCCCGTGGTATTCCATGTAGACCCCG ACCTCGACTGCCATAGAGTAGGTGTCCCGACATGGCAGTGCCGGTTGAAT AGTGCCAGTCCATTTTTTATACTAAAGTCTAGACATGCCTGTGCGGAGTA GGATCCATACTGAAACCTATACACGTCTGTGCTGAATAGGATCCGCGAAA ACCTATAAATGTCTGTGCCGGATAGGGCCGGTTTTGGTATACCGCCGGTC ACCTCTATGGACACGCCCGGTACAGGCACTAAATCGGGATATGCATACGT CTGTACACCGAGTTACGGCGACTGGAGTACGAGACAGCTATCTCGGAGTC GATGTTGCCGCTTGCCGCCCACCAAGTTTTTTCCCAAGCCGCGTTTTCGA AAAGTTCACACCCGGACGGGCTGACTCTTTAACCGTCACCCTGTTTTTTG TGGTACTCTTTTGGTATGCAAGATGGCTTTTTTTAATTTTGTGTGATTTT TCGTAGCGTGTGTTTCCTTTTTCTGTGGTAGTTGGCCGTGACTACGGACG GCGTCTGCATCAGTTAGGGACCGGTACAACAGCCCGAATGCTCAAACTCA AACGTTATTGAGCAGAGAATGGGGCGGCATTTGGTGTAAAACAACGCCGG TCGGAGATAGCTCATAACTCCTAACCGGCAGTTCTTATCTGGTTTAATAT GATGACAAAAAAATAAAAAAACCGCCACGATTGGTTTTGCTCCTACTGTA CTCGCGTCCCCGCTATTCTCCATGGTTGTCGTCCAGCTCACGAGATGACA GGTAGAGCCCCGTCGCTAGCTCTTCACTCGCGAGGCCCATTAGTATATGA TGTCACGAATACCAACCACAGCCCGCCAACAAACCTTGGGGGCGCTGCTT TTGTAACCCGTTTTGATTTCTGTGTCGTTGCCGATATTCCCTGGTTCACT GTTCTTCTGGAAATCCAAGTGAAAAAAACCAGGATAACGTTAGGTTTGTT TTATTCTCGAGATCCAAGTATAAGAAAGCTCCGTCCGTAGATGTTAAAAA CTCTTTGATTTATCGCGAAATTCAAGCGCCTGAGGATGCCGCCAAGGTCA AATGGTTCGCTCTGATGCATGTCTAACCACAGGCCGGTCTCGTTCATCGC ACCCCCTCGCGTCTTCTTTTCGTCTTTTATTTGTTTTTATATTTTGTCTC CAGAACTCCTCGGAGGGGGTCGACTTCGGGACAGACATGTTCGGCCAGCA GGAGCAGGGCAGCAGCGTCGCGTGCGGCATGATGCTGCTGGCCCTCTACC TGGTGTTCGACTCGTTTACCTCGCAGTGGCAGAGCCGCATGTTCACCAAG CATAGGGTGAGTGAATAA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9924:822..5439-

>mRNA_E_fasciculatus_S2_contig9924.17918.1 ID=mRNA_E_fasciculatus_S2_contig9924.17918.1|Name=mRNA_E_fasciculatus_S2_contig9924.17918.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=609bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9924:822..5439- (Ectocarpus fasciculatus EfasUO2)
ATGACGAGGGACGAGGTGTTCCGACGACTGGTCATCCTCGCGGTGGGGCT
TAACGTGACGTTCGTGCTGTGGGGGGTGCTGCAGGAACGCATCTTGAAGG
GTGAGTACGGTGACGACGGCGAGCACTTTACCTACTCGTACGGGCTCGTG
TTCATGAACCGCTTCCTCGGCTTCTTGTTCTCCGCCGGAATGATGCACTA
CACAAGGCCCAAGTGGTCGAAGGCTCTGGCCTACGAGTACTCCTTCCCGG
CTGTTTCGAACATGCTCAGCTCGTGGTGTCAGTACGAGGCGCTCAAGTAC
GTCACCTTCCCGACTCAGGTTTTGTCGAAGAGCTTCAAGATCGTGCCCAT
CATGGTCATGGGGAAGATTCTCGGAAGCAAGGAGTACCCTTTCTACGACT
ACGTTGTGGCAGGCGTTATCGCTCTGGGCATCACTCTTTTCCTGAACTCC
TCGGAGGGGGTCGACTTCGGGACAGACATGTTCGGCCAGCAGGAGCAGGG
CAGCAGCGTCGCGTGCGGCATGATGCTGCTGGCCCTCTACCTGGTGTTCG
ACTCGTTTACCTCGCAGTGGCAGAGCCGCATGTTCACCAAGCATAGGGTG
AGTGAATAA
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