mRNA_E_fasciculatus_S2_contig9902.17898.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9902.17898.1
Unique NamemRNA_E_fasciculatus_S2_contig9902.17898.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9902.17898.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU7_ECTSI)

HSP 1 Score: 451 bits (1161), Expect = 1.270e-154
Identity = 216/228 (94.74%), Postives = 219/228 (96.05%), Query Frame = 1
Query:    1 TISDYELHQALDFKPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHDDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAAVGGLCGHQAGVTCITAKGDGRHFISNSKDQTMKLWDMRRMLNPKDDKMKKAATIPHWDYRHMPMSFPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGRVCIWDILTGNMV 684
            T  DYELHQALDF+PKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARI AHDDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAAVGGLCGHQAG+TCITAKGDGRHFISNSKDQTMKLWDMRRML+PKDDKMKKAA IPHWDYRHM MS PALRP KSKRASDESVKTFHGHKVLQTLIRCYFSP HTTGQRFVMSGSADG VCIWDILTGNMV
Sbjct:  328 TRGDYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARISAHDDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAAVGGLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKDDKMKKAAHIPHWDYRHMTMSLPALRPIKSKRASDESVKTFHGHKVLQTLIRCYFSPTHTTGQRFVMSGSADGSVCIWDILTGNMV 555          
BLAST of mRNA_E_fasciculatus_S2_contig9902.17898.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A5_9PHAE)

HSP 1 Score: 431 bits (1109), Expect = 2.110e-146
Identity = 211/251 (84.06%), Postives = 218/251 (86.85%), Query Frame = 1
Query:    1 TISDYELHQALDFKPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHDDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAAVGGLCGHQAGVTCITAKGDGRHFISNSKDQTMKLWDMRRMLNPKDDKMKKAAT----------------------IPHWDYRHMPMSFPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGRVCIWDILTGNMVR 687
            T  DYELHQALDF+PKPGDSFCLFAIQFSPSNTHILGGGSD HVYLYSLERKERV+RIRAHD+DVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAAVGGLCGHQAG+TCITAKGDGRHFISNSKDQTMKLWDMRRML+PKDDKMKKA                        +  WDYRHMPMSF ALRPKK KR SDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADG VCIWD+LTGNMVR
Sbjct:  392 TRGDYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDKHVYLYSLERKERVSRIRAHDNDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAAVGGLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKDDKMKKATHTSLWCPSYFVGITCLCVCVVVYVHCWDYRHMPMSFTALRPKKGKRTSDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGSVCIWDVLTGNMVR 642          
BLAST of mRNA_E_fasciculatus_S2_contig9902.17898.1 vs.
Match: WD40-repeat-containing (domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR0_9STRA)

HSP 1 Score: 235 bits (599), Expect = 2.330e-68
Identity = 128/270 (47.41%), Postives = 165/270 (61.11%), Query Frame = 1
Query:   10 DYELHQALDFK-PKPGD-SFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHDDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAA-VGGLCGHQ--------------------------------AGVTCITAKGDGRHFISNSKDQTMKLWDMRRMLNPKDDKMKKAATIPHWDYR-HMPMSFPALRP------------KKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGRVCIWDILTG 675
            DYE+H+ALDF+ P+ G  SFCLF+I+FSP+NTH+L GGSD+ V+LY+LERKE VAR++AH DDVNAV + D G  V+LSG DDC I++WD+RS     VG LCGH                                 AG+TC++A+ DGR   SNSKDQT+KLWD R M  P     +       WDYR  +P +  A+              +   +  D+S+KTF GH+VLQTLIRC FSP HTTGQR+++SGS  G V +WD+LTG
Sbjct:  345 DYEMHEALDFQSPERGAYSFCLFSIRFSPTNTHLLAGGSDHAVHLYNLERKEVVARLKAHADDVNAVCYLDDGGNVLLSGSDDCSIRVWDIRSSKTKPVGTLCGHDGERYVHRRMQQYRAAPDADPLVAAALHSGVAAAGITCVSARADGRTVASNSKDQTLKLWDARAMAGPGSAVARLPTRQSSWDYRWDIPAAMRAVSAXXXXXXXXXXGGRSCTQGVDQSLKTFSGHRVLQTLIRCNFSPMHTTGQRYIVSGSQCGGVHMWDVLTG 614          
BLAST of mRNA_E_fasciculatus_S2_contig9902.17898.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XUD8_BRAFL)

HSP 1 Score: 223 bits (567), Expect = 2.860e-68
Identity = 113/231 (48.92%), Postives = 151/231 (65.37%), Query Frame = 1
Query:   10 DYELHQALDFKPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHDDDVNAVAFADSGSQVVLSGGDDCVIKIWDLR-----SPDAAVGGLCGHQAGVTCITAKGDGRHFISNSKDQTMKLWDMRRMLNPKD-DKMKKAATIPHWDYRHMPMSFPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGRVCIWDILTGNMV 684
            DYE H ALD  P     FC+F++ FS  N  +LGG +D  +Y+Y  ER ER  RI +H+DDVNAVA+AD  SQ++ SGGDD + ++WD R     SP+A VG L GH  G+T I +K D RH ISNSKDQT+KLWD+R+   P+  +  ++A    +WDYR  P+  P      ++ A D S+ T+ GH VL TL+RC FSP HTTGQRF+ SG + G V ++D+LTG +V
Sbjct:   91 DYETHIALDLNPSER-RFCIFSLTFSSDNKEVLGGANDGCLYIYDRERNERTLRIESHEDDVNAVAYADDSSQILYSGGDDGLCRVWDRRMLSENSPNA-VGTLAGHSDGITFIDSKADARHLISNSKDQTIKLWDIRKFSPPEGLEASRRAVANQNWDYRWQPV--PKRGRYNARLAGDTSLMTYRGHGVLHTLVRCRFSPVHTTGQRFIYSGCSTGSVVVYDVLTGQIV 317          
BLAST of mRNA_E_fasciculatus_S2_contig9902.17898.1 vs.
Match: DDB1- (and CUL4-associated factor 11-like isoform X1 n=23 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZES3_BRABE)

HSP 1 Score: 223 bits (569), Expect = 3.830e-66
Identity = 112/231 (48.48%), Postives = 152/231 (65.80%), Query Frame = 1
Query:   10 DYELHQALDFKPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHDDDVNAVAFADSGSQVVLSGGDDCVIKIWDLR-----SPDAAVGGLCGHQAGVTCITAKGDGRHFISNSKDQTMKLWDMRRMLNPKD-DKMKKAATIPHWDYRHMPMSFPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGRVCIWDILTGNMV 684
            DYE H ALD  P     FC+F++ FS  N  +LGG +D  +Y+Y  ER ER  RI +H+DDVNAVA+AD  SQ++ SGGDD + ++WD R     +P+A VG L GH  G+T I +K D RH ISNSKDQT+KLWD+R+   P+  +  ++A    +WDYR  P+    +R   ++ A D S+ T+ GH VL TL+RC FSP HTTGQRF+ SG + G V ++D+LTG +V
Sbjct:  277 DYETHIALDLNPSER-RFCIFSLTFSSDNKEVLGGANDGCLYIYDRERNERTLRIESHEDDVNAVAYADDSSQILYSGGDDGLCRVWDRRMLSENNPNA-VGTLAGHSDGITFIDSKSDARHLISNSKDQTIKLWDVRKFSPPEGLEASRRAVANQNWDYRWQPVP-KRVRTSSARLAGDTSLMTYRGHGVLHTLVRCRFSPVHTTGQRFIYSGCSTGSVVVYDVLTGKIV 504          
BLAST of mRNA_E_fasciculatus_S2_contig9902.17898.1 vs.
Match: DDB1-and (CUL4-associated factor 11 (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2SEB9_ARAVE)

HSP 1 Score: 215 bits (547), Expect = 1.110e-65
Identity = 113/232 (48.71%), Postives = 151/232 (65.09%), Query Frame = 1
Query:   10 DYELHQALDFKPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHDDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRS----PDAAVGGLCGHQAGVTCITAKGDGRHFISNSKDQTMKLWDMRRMLNPKD--DKMKKAATIPHWDYR--HMPMSFPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGRVCIWDILTGNM 681
            D ELH+AL   P+    FC+FA++FS     ILGG +D ++Y+Y+ E   R  RI +H+DDVN VAFAD+ SQ++ SGGDD + K+WD R+        VG L GH+ G+T +  KGDGRH I+NSKDQT+KLWDMR M +P    +   KA    +WDYR   +P S   L  +K K   D S+ T+ GH VLQTLIRC+FSP  TTGQ ++ +G A GRV ++D+LTG +
Sbjct:   24 DQELHEALPLYPEER-RFCVFALRFSQDGREILGGANDQYLYVYNREENRRTLRIYSHEDDVNTVAFADNTSQILFSGGDDGICKVWDRRTLCEFSPKPVGILAGHEDGITYVDPKGDGRHLITNSKDQTIKLWDMR-MFSPSSCVEGAYKAVKSHNWDYRWQRVPTS---LNKQKRKLPGDTSLMTYRGHSVLQTLIRCHFSPETTTGQSYIYTGCAQGRVVVYDVLTGKI 250          
BLAST of mRNA_E_fasciculatus_S2_contig9902.17898.1 vs.
Match: Predicted (protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RQ28_NEMVE)

HSP 1 Score: 213 bits (541), Expect = 9.970e-65
Identity = 112/230 (48.70%), Postives = 145/230 (63.04%), Query Frame = 1
Query:   10 DYELHQALDFKPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHDDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAA----VGGLCGHQAGVTCITAKGDGRHFISNSKDQTMKLWDMRRML-NPKDDKMKKAATIPHWDYRHMPMSFPALRPKKSKR-ASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGRVCIWDILTGNM 681
            DY  H ALD +P+    FC F+I FS  NT IL GG+D  +Y+Y    ++R  RI  H+DD+ +V FAD GSQ+  S GDD + K+WD R+ +      VG L GH  G+TCI +KGDGRH I+NSKDQT+KLWD+R+   N      K+A     WDYR          P+KS+  A D S+ T+ GH VL TLIRCYFSP HTTGQR++ +G + G V I+DILTG +
Sbjct:   91 DYNTHVALDLRPEVS-RFCAFSITFSHDNTEILAGGNDACLYIYDRGSEQRTLRIEGHEDDLGSVRFADPGSQIFYSAGDDGLCKVWDRRTLNETNPCPVGVLSGHADGITCIASKGDGRHLITNSKDQTIKLWDIRKFSDNDGIVATKRAVASQRWDYRWQ------KAPRKSETLAGDVSLMTYRGHSVLNTLIRCYFSPDHTTGQRYIYTGCSTGSVVIYDILTGEV 313          
BLAST of mRNA_E_fasciculatus_S2_contig9902.17898.1 vs.
Match: DDB1- (and CUL4-associated factor 11-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014591523)

HSP 1 Score: 218 bits (554), Expect = 2.880e-64
Identity = 114/230 (49.57%), Postives = 145/230 (63.04%), Query Frame = 1
Query:   10 DYELHQALDFKPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHDDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRS----PDAAVGGLCGHQAGVTCITAKGDGRHFISNSKDQTMKLWDMRRMLNPKD-DKMKKAATIPHWDYRHMPMSFPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGRVCIWDILTGNMV 684
            +Y+ H AL   P    SFC+F++ FS  N  ILGG +D  +Y+Y  E  +R  RI AH+DDVNAVAFADS SQ++ SGGDD ++K+WD R+        VG L GH  G+T I +KGD R  +SN KDQ+MKLWD+R   + +     KKA T   WDYR     FP    KK   A D S+ T+ GH VL TLIRC+FSP  TTGQR+V SG A G V ++D+LTG +V
Sbjct:  236 EYDTHNALHLFPGE-HSFCIFSLTFSYDNREILGGANDGCLYVYDRESNQRTLRIEAHEDDVNAVAFADSSSQILFSGGDDGLLKVWDRRTLREENPIPVGTLAGHSDGITYIDSKGDARFLLSNCKDQSMKLWDVRMFSSEEGIQSTKKAVTKQKWDYRWQ--QFPKRASKKKVLAGDSSIMTYRGHSVLNTLIRCHFSPEMTTGQRYVYSGCASGTVVVYDLLTGKIV 462          
BLAST of mRNA_E_fasciculatus_S2_contig9902.17898.1 vs.
Match: Uncharacterized (protein n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7N644_STRPU)

HSP 1 Score: 216 bits (550), Expect = 7.670e-64
Identity = 114/234 (48.72%), Postives = 146/234 (62.39%), Query Frame = 1
Query:   10 DYELHQALDFKPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHDDDVNAVAFADSGSQVVLSGGDDCVIKIWDLR----SPDAAVGGLCGHQAGVTCITAKGDGRHFISNSKDQTMKLWDMRRM-LNPKDDKMKKAATIPHWDYRHMPMSFPALRPKKSKRA----SDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGRVCIWDILTGNMV 684
            DY+ H AL+ +P     FC F+IQFS  N  IL G +D  +Y+Y  E+ +R  RI +H+DDVNAV FAD  SQ++ SGGDD + K+WD R    S    VG L GH  G+T I +KGDGRH I+NSKDQ++KLWD+R    N   +  ++A    HWDYR   +      PKKSKR      D S+ T+ GH VL TL+RC FSP  TTGQR+V +  A G V I+DILTG +V
Sbjct:  216 DYDTHTALNLRPSTEGHFCAFSIQFSNDNKEILAGANDGCLYIYDREKNDRTLRIESHEDDVNAVCFADGSSQILFSGGDDGLCKVWDRRTLSDSNTKPVGVLAGHMDGITYIDSKGDGRHLITNSKDQSIKLWDIRCFSTNNVVEASRRAVAQQHWDYRWQQV------PKKSKRKRGVKGDTSLMTYRGHGVLHTLLRCRFSPQFTTGQRYVYTACATGAVVIYDILTGKVV 443          
BLAST of mRNA_E_fasciculatus_S2_contig9902.17898.1 vs.
Match: DDB1- (and CUL4-associated factor 11-like isoform X1 n=2 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A93C64)

HSP 1 Score: 216 bits (550), Expect = 9.680e-64
Identity = 112/233 (48.07%), Postives = 151/233 (64.81%), Query Frame = 1
Query:    4 ISDYELHQALDFKPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHDDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAA----VGGLCGHQAGVTCITAKGDGRHFISNSKDQTMKLWDMRRMLNPKDDKMKKAATIPH-WDYR--HMPMSFPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGRVCIWDILTGNM 681
              D E+H+AL   P+    FC+FA++FS     ILGG +D  +Y+Y+ E  +R  +IR+H+DDVN VAFAD+ SQ++ SGGDD + K+WD R+   A    VG L GH+ G+T + +KGDGRH I+NSKDQT+KLWDMR    P   +  + A   H WDYR   +P S   L   K K   D S+ T+ GH VLQTLIRC+FSP  TTGQ ++ +G A GRV ++D+LTG +
Sbjct:  231 FGDQEVHEALPLFPEER-RFCVFALRFSQDGREILGGANDECLYVYNREENKRTLKIRSHEDDVNTVAFADNTSQILFSGGDDGICKVWDRRTLCEAQPKPVGILVGHEDGITYVDSKGDGRHLITNSKDQTIKLWDMRAFSPPSSIEGSRRAVASHNWDYRWQRVPSS---LNKHKRKLPGDTSLMTYRGHSVLQTLIRCHFSPEATTGQSYIYTGCAQGRVVVYDVLTGKI 459          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9902.17898.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.270e-15494.74protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.110e-14684.06protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
WD40-repeat-containing2.330e-6847.41domain protein n=1 Tax=Tribonema minus TaxID=30337... [more]
Uncharacterized2.860e-6848.92protein (Fragment) n=1 Tax=Branchiostoma floridae ... [more]
DDB1-3.830e-6648.48and CUL4-associated factor 11-like isoform X1 n=23... [more]
DDB1-and1.110e-6548.71CUL4-associated factor 11 (Fragment) n=1 Tax=Arane... [more]
Predicted9.970e-6548.70protein (Fragment) n=1 Tax=Nematostella vectensis ... [more]
DDB1-2.880e-6449.57and CUL4-associated factor 11-like n=1 Tax=Pecten ... [more]
Uncharacterized7.670e-6448.72protein n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7N... [more]
DDB1-9.680e-6448.07and CUL4-associated factor 11-like isoform X1 n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9902contigE_fasciculatus_S2_contig9902:272..5600 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score456.1
Seed ortholog evalue9.9e-126
Seed eggNOG ortholog2880.D8LKU7
Preferred nameDCAF11
Model size687
KEGG koko:K10770,ko:K11801
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000151,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007275,GO:0007568,GO:0008021,GO:0008134,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010259,GO:0010468,GO:0010498,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010941,GO:0010942,GO:0012505,GO:0016020,GO:0019219,GO:0019222,GO:0019538,GO:0019867,GO:0019941,GO:0030133,GO:0030163,GO:0030424,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031410,GO:0031461,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0032501,GO:0032502,GO:0032991,GO:0036211,GO:0036477,GO:0040008,GO:0040014,GO:0040018,GO:0042995,GO:0043005,GO:0043025,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043292,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044449,GO:0044456,GO:0044464,GO:0045202,GO:0045892,GO:0045927,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048638,GO:0048639,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051171,GO:0051172,GO:0051239,GO:0051240,GO:0051252,GO:0051253,GO:0051603,GO:0055120,GO:0060255,GO:0065007,GO:0070013,GO:0070382,GO:0071704,GO:0080008,GO:0080090,GO:0080134,GO:0080135,GO:0097458,GO:0097708,GO:0098588,GO:0098793,GO:0098805,GO:0099080,GO:0099081,GO:0099503,GO:0099512,GO:0120025,GO:1901214,GO:1901216,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1905802,GO:1905803,GO:1990234,GO:2000112,GO:2000113,GO:2001141
Exons6
EggNOG free text desc.WD repeat-containing protein
EggNOG OGsKOG0266@1,KOG0266@2759
EC2.1.1.229
Cds size687
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9902.17898.1prot_E_fasciculatus_S2_contig9902.17898.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9902 272..5600 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842633.1420403-CDS-E_fasciculatus_S2_contig9902:271..3411696842633.1420403-CDS-E_fasciculatus_S2_contig9902:271..341Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9902 272..341 -
1696842633.1564243-CDS-E_fasciculatus_S2_contig9902:852..10051696842633.1564243-CDS-E_fasciculatus_S2_contig9902:852..1005Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9902 853..1005 -
1696842633.1676512-CDS-E_fasciculatus_S2_contig9902:1466..16361696842633.1676512-CDS-E_fasciculatus_S2_contig9902:1466..1636Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9902 1467..1636 -
1696842633.1791246-CDS-E_fasciculatus_S2_contig9902:3862..39281696842633.1791246-CDS-E_fasciculatus_S2_contig9902:3862..3928Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9902 3863..3928 -
1696842633.1896272-CDS-E_fasciculatus_S2_contig9902:4486..45621696842633.1896272-CDS-E_fasciculatus_S2_contig9902:4486..4562Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9902 4487..4562 -
1696842633.1999767-CDS-E_fasciculatus_S2_contig9902:5448..56001696842633.1999767-CDS-E_fasciculatus_S2_contig9902:5448..5600Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9902 5449..5600 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9902.17898.1

>prot_E_fasciculatus_S2_contig9902.17898.1 ID=prot_E_fasciculatus_S2_contig9902.17898.1|Name=mRNA_E_fasciculatus_S2_contig9902.17898.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=229bp
TISDYELHQALDFKPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLE
RKERVARIRAHDDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAAVG
GLCGHQAGVTCITAKGDGRHFISNSKDQTMKLWDMRRMLNPKDDKMKKAA
TIPHWDYRHMPMSFPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPA
HTTGQRFVMSGSADGRVCIWDILTGNMVR
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mRNA from alignment at E_fasciculatus_S2_contig9902:272..5600-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9902.17898.1 ID=mRNA_E_fasciculatus_S2_contig9902.17898.1|Name=mRNA_E_fasciculatus_S2_contig9902.17898.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5329bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9902:272..5600- (Ectocarpus fasciculatus EfasUO2)
ACAATCAGCGACTACGAGCTGCACCAAGCTCTCGACTTCAAGCCGAAGCC CGGTGACTCGTTCTGCCTTTTCGCCATCCAGTTTTCCCCCAGCAACACAC ACATCCTGGGCGGCGGGTCCGACAACCACGTCTACCTCTACAGCCTCGAG AGGTTGGTTGGTCGTTGTGGTATTTGGCTCGGTAGCAAGCTTAGCGATAC ACCGCGGGGTTGGTTCAAGCCATGAATGCATATGTCAATCGTTGCAACGT ATGCAACGAAAAATAATTTTGGGTGTTTGTTTTGTCTCAGTTTCCCGAGA GGGCTGGCTGCTCCCGCTCGTTGTGTTGATGGGTTTGGCGTGTCTCTCGC TTGGCATCAGCACCCCACTCGATGTAATTGCGGCTACAACTAGGGTCAAG CGTCGTGAGACACTAATCGACCACATACGAATCTATTTACGAACAAGCAA GGGTCGAAGCTGCTGGTGATGAGATTTTTTTAACCTCGAGCGGCTGCTGC TGCTGCTATATGGCGTGTGTATGAGGAGCGGGCATCGCCTCGTCCCCCCA AGTCACGTACGTACTGTAAGAGTCGTGCGACCGCCGCCTTCCTTCTTGCC GCCTGGGGGAGGTAGGAAGGGAAGGTTGCGGTGTTGCCTGCAAGGGAACA CTGCGGCGATGGAGGTGATGAGGTGATGGATGGATATGACGTCGCAGCGG AAGAACAAAACGGGGGAGCGGAGGGTTATTAATTAATTAATTAATTTATT TATTTATTTATTTATTCTTGGCGGTTTCAGCCAAAAAAGAAAAAGAAAGG CCTTCGGCTTTGGAGACGGCGCAGGGATGTCGTTTTGTCCTACTACCTAC AGGCTGGCTTCGACGCGGTTGTTGCTTAAACCAAACGTACACCCCCGAAC GACATCATCAAACGTCAACAACACCGTCGTGCATCACCACCAATCGCACA CACGTGTATCACCGCGACCGTCAACAATCAAACTCAGCAATACAACACAC GACTGAAGCGTGTCTCTCTATGTGTCGATGGCTCTCAGGAAAGAGCGAGT GGCGCGCATTCGCGCCCACGACGACGACGTGAACGCTGTGGCCTTTGCGG ACTCGGGATCCCAGGTGAGAGCCCTACCGCCACACAGACAGCCGGACAAC TCTTCTTTCGTTTGCGATGCCGCTTCTGTCAGACATTCGAAGGGCAGCTT AGCCTCGCCCTCAACGGGATCTTCAGAAGCATCTCCGTTTCGTTTCAGCG GCACTGAGACTGGCTGTTTTTCGTCGCTCAACCAGTTGGAGCGGTTAAGG TTAACACGCACACAAGCAGCAGGCGGATGGGTTATGATTTTGATAGGTGT CTCGAAGGCGACCGAAGAGGTGCAAGGCAAGACAACATCCAATACAGCAG TATAGGTCAGTCAGCACCCATGCGGATTTAACCGTGTGTGGGGATGTGTG TGGGTTCATGCCCCCGGCTTTCACCTCGAGACCGGTGCCGGTGCCGTGAC TCTAATCAACTGCTCCGAATGCCCCAGCATGCCTCTGTAGATGGTGAATC CTCGTGGGCTTTGCCTGACGCGCTTCAATGTTTCACCGAAAGTGTTCCGT TGTCGGGTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCT GCTGCTGCTGCTGCTGCATCAGGTTGTACTATCCGGAGGCGACGACTGCG TGATCAAGATCTGGGACTTGCGCTCTCCCGATGCGGCGGTGAGATGAAAT CGTTATGCACTTGCGGCACTGCGGGGGGGGGGGGGGGGGCTCTTATGTGC ATGCCTTAGTCGTTAGGCCATTGACCACGCGTCCTCGAGAGGACGGAGCA TTGTTCCCACAGGATCGATCACCCATGGCCAACCGTTCCTTCCTACTTTG CCAAAGGTGGCTCAAAAATCACTTCCCGCCCTTTCTACCCACTTGGTATG CCCCAGTACAGCTACTGTCACTTCCCTGCCCCATGCCTCAAACATCTCCC TGTACCTTCCTTCTGTTTTCCCCAGCTCAGCCATGTACACCTCCCTCTCC TTCTTGTACAGCGAGCATTGCGCAACTACATGAACACGGTCTTCGCACTC CCAGCCGCAATCACACTTGAAGTTGTCGTCTTCATCGTCTACAGCAGTCC TATATCCCCGGTCCTGAATTTGACCTTGAGCTTTATCCCTGCATCCATTG GTCCATGTAGATACTCCTTGAACCCCATTCCTTCTTCCAACAGGCCGTAC AAACCTAGACCCGGCTTAACCTTGGTTTCTTCGGCTAGATTATGTTTTCC TCTCCGAGCAATAGCAACAGATATCTCCTCCTTGATCCCCTCTAGACCCT CCATTTCCAACGTTTTACTTTCGTCAATGTCGAACCCCTTCCATACGCCA TCTACAAGCTTGACCCACTCCGTGGGTTGTCTACCCCTCTTCTTGTTTGC CCACTTCGCCTCCCAAGCTATTCTCGGCAACCTCTCTTCTCCCATACCAC ACATGCGGTACCGCCTTTTCAGCTTCCCTACGTCTCTTCCCGATTTTAGG CATTGGACCCCCAGTTCTGTTCTGACGGCCGCATTACTTGTGCGCTTGGA GCATCCTAGGATGATTTTCGCTGCTTTCATCTGTGCCGCCTCTAGCTCTT TGACCACCTTCGTGTTTCCTTCCCATACTTCGCCGGCGTACTCCAGGGGC GGTACGATTACGCTCTTCAAAACTGTCAATTTGATGCGTGTACGAGGTGC CGGTTTGCGAGTATTGGGTGCAGCTTCCCTGCTCGTGCTTTGCCCTTTTC CGCTACCTTGGACATGTGTGCATTCCACGAGCAGTCTTTCGCGATCTCTA TTCCGAGATATGTGTACTGGTCCACTACTGCAAGCTCCTCGACCCCCCAC TTCCATCTGTTTTCTTCTGGTTTCTCCCTGTCCTCGTTGCACACCATGAC GGCACTCTTCTTCACGTTGGCAGACAATCTCCACTTCTCAGTAAACTCCT TCGCTGCGTCAATCTGCATTTGAAGTGTCAGATATCCCAACAAAATATTC CGCAAACAACATTCCCGACACGGAAGTTTCCCCTACCACTACTCCCTGCC CGACTGTCTACGACTTTCAACAGATCGTTGATGAACACCTGGAACAATGT TGGGGACAAAGTGCAGCCTTGTGGGACCCCCTGCTCAATGTTGAAGAATT TAGACAGTTCTCCGTCTGGCATTAGTATGCCAGCACTCTTCGTACACTCT GTCATCTTCTTCAGCACTCTCCACATTTTCCCTTTATCCCGTACTTGGAA AATTGTTTCCACAGCCCATTTCTCCATACTTTTGGCTTTTTGGGGGGGGT TCTTCACCAACCGTTGCCATATGATGCCATGTCGAAATGTACCACCAACC ACTTGCAGCTACCCGGCCAGCTGGCCCGATCCCCGCTGTGGCTTGGCTAG TTACTTTTGTTTGTTTTCACGCAGGAATTTCAACACCCACTGCCGCGGGG GCCGAAGCCGAAACCCATTTGAAACTTATCGTGAAAGTCGCGCGACCCAA ACAACATCGACGTCTACCGCGTGAAAAGACATTCTCTGCCGGCCCTCCGT CAATCCTTTTCGCTCTTGTCAATCCTGATCCATTTGTCTATTTCTTTGCT CCGTCCGCTTGATATCTACCCGTCGTGTTGTATCCACTTCAATATCTCAC ACACATGGACGGTTTCTTGGCTGTAGAGAGCGCGGAAGACGAGGTGGTGA ACCTGTGAGGAAGCCAGCATCAACAACGAACAAAAACCAAAGTAACAACA GTAACAACGAGAACAACAGTAACAACCAACAGCAAGTCCAGCAGCGATAT TTAGCACCAGCAACACAGCCAACAACACCACCACCGACAAGAACAATTCG GCGACAGCGACAGAAAAGTTCCACTCAATCACAATCACTTCCGCGCGGCG CGCTGTGCCACCAGGTGGGGGGTCTCTGCGGCCACCAGGCGGGGGTTACA TGCATCACGGCCAAGGGCGACGGGCGCCACTTCATCTCCAACAGCAAGGA CCAGACCATGAAGCTGTGGGACATGCGTCGGATGCTCAACCCTAAGGACG ACAAGATGAAGAAGGCCGCCACCATCCCTCACTGGTGCGAGAGAAGGGGA TTTATCGTATGCTCGCGTGGTCGTCCGCGTGCACTGCCGTGTGCTCGTTT TTCCGACGAGCGTTTCGTGTGTACCACGCGTGTGCGCGCTTGGGCGTGCT GCAGCAGATACTGCTGTCCCCAGCTGGGTTTTGGGAGTGGGTTGTTGTTG TTGTGAGTGTGTAATCATGTCCATGTTCGTCGGGCAAACGTTCTGTGTGC TGCCCGTACTTGCTCAAGCTACGAGTTTCCCGGCACCATCTGCAGCCTTA CACAGAAGAGGCGGTGGGTCTCTTGTCGTATGCGTAAACCCTTCAAAAGC GTGTGATTTTCACCCGCCGTCCACCGCTCTCATCGCCCCGGCACTTTTTC GCCCGCCCCATCACCAGCAGCCCCCCCCCCGCCCTCCCCTCTCACTACAT TTGCCGACCCCCCCAAACCCCCTGTCTGGTCCGTGATCTCGGCAGGGACT ACCGACATATGCCCATGTCCTTCCCCGCGCTGAGGCCGAAGAAGAGCAAG AGGGCCTCCGACGAGTCCGTGAAGACATTCCACGGCCACAAGGTGCTGCA GACGCTCATCCGGTGCTACTTCTCGCCCGCGCACACCACGGGACAACGGT GAGCCAAAAGTGGTGCAGCCATGTTGTACAATATCTACACTACCATGTCT CTCGTTTTTCCTTTTTTTTTTTACCACGAGTTTTGCGTACGACTCTCGTT TTTACGATACTTCCTGTTTTGTCACGCCAGAGAGGTTTGGACTCACAACG ATACCACAGTGTTGGCTTGCAACTGAACCACTCGAACATTGTTGCGTGAA CCGAGCTCAGATACCGGGTGGAACTTCCAACCCTTTTATCTTTTATCTGC TGTGCACTGTAGGCCATAGGAGCAGCAGCAGCAGCAGTAGCAAGACAGCA GTATCAACAACGGTAACCATGAACTAACAACGCACGTGTCGAGAGCGACA GCTAGCCCTTATTCACCCCCTGTCTCTTCCGTAGTGTTATATTTTGTATA CTGTTTTTTTTGTGTGGAGTGTGTGCTCTACTGTACCCACCTTCCCATCA ATGGCAACGTCATAGGCCACAAAAAACGACGGGTTTCTTCCCTGGTGTCT TTTTGTCAGGTTCGTCATGTCCGGGAGCGCTGACGGAAGGGTTTGCATCT GGGATATTCTCACGGGCAACATGGTAAGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9902:272..5600-

>mRNA_E_fasciculatus_S2_contig9902.17898.1 ID=mRNA_E_fasciculatus_S2_contig9902.17898.1|Name=mRNA_E_fasciculatus_S2_contig9902.17898.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=687bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9902:272..5600- (Ectocarpus fasciculatus EfasUO2)
ACAATCAGCGACTACGAGCTGCACCAAGCTCTCGACTTCAAGCCGAAGCC
CGGTGACTCGTTCTGCCTTTTCGCCATCCAGTTTTCCCCCAGCAACACAC
ACATCCTGGGCGGCGGGTCCGACAACCACGTCTACCTCTACAGCCTCGAG
AGGAAAGAGCGAGTGGCGCGCATTCGCGCCCACGACGACGACGTGAACGC
TGTGGCCTTTGCGGACTCGGGATCCCAGGTTGTACTATCCGGAGGCGACG
ACTGCGTGATCAAGATCTGGGACTTGCGCTCTCCCGATGCGGCGGTGGGG
GGTCTCTGCGGCCACCAGGCGGGGGTTACATGCATCACGGCCAAGGGCGA
CGGGCGCCACTTCATCTCCAACAGCAAGGACCAGACCATGAAGCTGTGGG
ACATGCGTCGGATGCTCAACCCTAAGGACGACAAGATGAAGAAGGCCGCC
ACCATCCCTCACTGGGACTACCGACATATGCCCATGTCCTTCCCCGCGCT
GAGGCCGAAGAAGAGCAAGAGGGCCTCCGACGAGTCCGTGAAGACATTCC
ACGGCCACAAGGTGCTGCAGACGCTCATCCGGTGCTACTTCTCGCCCGCG
CACACCACGGGACAACGGTTCGTCATGTCCGGGAGCGCTGACGGAAGGGT
TTGCATCTGGGATATTCTCACGGGCAACATGGTAAGA
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