mRNA_E_fasciculatus_S2_contig9793.17794.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9793.17794.1
Unique NamemRNA_E_fasciculatus_S2_contig9793.17794.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT7_ECTSI)

HSP 1 Score: 376 bits (965), Expect = 1.350e-124
Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 1 
Query:   19 RENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPSTTPVSAPVAVEEDEDARALRELEASMAM 639
            RENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGY+LPSVPSTTPVSAPVAVEEDEDARALRELEASMAM
Sbjct:   33 RENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYELPSVPSTTPVSAPVAVEEDEDARALRELEASMAM 239
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ84_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 3.790e-80
Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 1 
Query:  208 MNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPSTTPVSAPVAVEEDEDARALRELEASMAM 639
            MNMQTFNAMRSGAKAM+ ARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVP+GY+LPSVPSTTPVSAPVAVEEDEDARALRELEASMAM
Sbjct:    1 MNMQTFNAMRSGAKAMEGARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPQGYELPSVPSTTPVSAPVAVEEDEDARALRELEASMAM 144
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Snf7-domain-containing (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAA0_9STRA)

HSP 1 Score: 233 bits (595), Expect = 3.550e-69
Identity = 146/220 (66.36%), Postives = 164/220 (74.55%), Query Frame = 1 
Query:    7 TRQHRENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAA-----------PQGVEQPAVAESKVPEGYDLPSVPSTTPVSAPVAVEEDEDARALRELEASM 633
            T + RE H+QKKIKAQLL+AKAKS   DK+GALFALKRKKMYE E+NK+NGAR+TLE Q IALEGSN N+QTF AM SG KAMQ ARG+LDVD VD VMDDI++EMDIA+QIG+AIARPA+ LFDDD LL EL  +EEA++EE LLA PAVP   P+A           P G  QP  A S    G DLPSVP T  V  P A EEDED RALRELEASM
Sbjct:   31 TLEKRETHLQKKIKAQLLEAKAKSQT-DKKGALFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQTFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARPAEGLFDDDDLLAELGAMEEAEMEETLLAAPAVPARPPSAAMAAGSPTLVVPGGARQPVAAGSGS-SGMDLPSVP-TGDVRVPAA-EEDEDLRALRELEASM 246
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9Q0_9STRA)

HSP 1 Score: 175 bits (444), Expect = 2.910e-47
Identity = 109/209 (52.15%), Postives = 143/209 (68.42%), Query Frame = 1 
Query:   19 RENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADD-LFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPSTTPVSAPVAVEEDEDA-RALRELEASMAM 639
            RE+HI+KKI+AQL +AK KS+AKDKRGA+F LKRKKMYE E+ KL GARMTLE+Q++ LE + +NMQTF A+R+GA  M+   G+++VD VDD+MDDI++EM  A++IG AI++P  + L+DDD L  ELDML E DLE+QL A       +PA  Q    PA A +     +  P  PS    +  V+ + D D    LR LEASMAM
Sbjct:   36 RESHIEKKIEAQLEEAKKKSAAKDKRGAIFCLKRKKMYESEIEKLQGARMTLETQVMTLESTQVNMQTFTALRTGANQMKAIHGQMNVDSVDDIMDDIQEEMATADEIGRAISQPLGNALYDDDELAAELDMLVEEDLEKQLDAA----HQQPAPAQPARVPAQAPATAASMFTFPEAPSHAVTNIKVSGKADADELEELRRLEASMAM 240
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Uncharacterized (protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SS87_9ARCH)

HSP 1 Score: 175 bits (443), Expect = 3.190e-47
Identity = 110/210 (52.38%), Postives = 144/210 (68.57%), Query Frame = 1 
Query:   19 RENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLL--APPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPS--TTPV-SAPVAVEEDEDARALRELEASM 633
            RE HI KKI A L +AK KS  KDK GALFALKRKK+YE EV KL GAR+T+E+QI++LE +++N++TF AM++GA AM+  RG +D D+VDDVMD + +E DI + I +AI+RP  DLF+D+ LL+EL  L+  ++E  +     PA P A P  PQ V             ++ P+VP+   +PV S PVA EEDED RALRELEASM
Sbjct:   36 REEHINKKIDASLQEAKLKSQKKDKNGALFALKRKKLYEAEVAKLQGARITMETQILSLESASVNIETFKAMKTGANAMKAMRGDIDADKVDDVMDALAEEKDIQDAISEAISRPGQDLFNDEELLDELAELDALEMEASVANTVAPAAPVAPP--PQSV-------------FNFPAVPTKAVSPVPSKPVAHEEDEDERALRELEASM 230
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK50_9STRA)

HSP 1 Score: 168 bits (426), Expect = 6.870e-45
Identity = 102/211 (48.34%), Postives = 134/211 (63.51%), Query Frame = 1 
Query:    7 TRQHRENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPSTTPVSAPVAVEEDEDARALRELEASMAM 639
            T + R+ H+ KKI+ QL +AK K + KDKRGAL+ LKRKKMYEGE+ K+NGAR+TLE Q+IA+EG+  N +T  AM +G  AM  AR  + VD V ++MDDI DE++ A  I +AI+ PA+ + DD+ LL EL+ LEE +LE QLL  PAVP                        DLP VP+ TP       +ED D +ALRELEA+MA+
Sbjct:   34 TLEKRQVHLDKKIEQQLAEAKVKIAKKDKRGALYCLKRKKMYEGEIEKINGARLTLEQQMIAIEGTVTNSETVKAMTAGKDAMAKARAGVTVDDVGELMDDITDEVEQANDIAEAISAPANQVLDDEDLLNELNELEELELESQLLDAPAVPAT--------------------AIDLPDVPTATPEIPVQQNQEDADTKALRELEAAMAL 224
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Hypothetical (protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BDW8_9STRA)

HSP 1 Score: 167 bits (422), Expect = 2.490e-44
Identity = 106/213 (49.77%), Postives = 140/213 (65.73%), Query Frame = 1 
Query:    1 LRTRQHRENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDL-FDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPSTTPVSAPVAVEEDEDARALRELEASMA 636
            L T + RE H+ KK+      AKAK + KDK+GALFALKRKKMYEGE++K+NG++MTLE+QI++LE +  NMQTF AM+ GA AM + R + DVD VDD+M DI++EM+IA++I  AIA+P D +  DDD LL+EL  LEE DLEE+L+  PA          GV +P            +PS P+  P       +E+ED  AL+ELEA MA
Sbjct:   37 LLTLEKREEHLFKKMDEMQAQAKAKMAKKDKKGALFALKRKKMYEGEIDKINGSKMTLETQIMSLESNVQNMQTFQAMKQGANAMANVRKQADVDNVDDLMADIQEEMEIAQEISTAIAQPIDGVGVDDDELLDELKELEELDLEEKLMEIPA----------GVNKP----------LKMPSAPTAKPA------QEEEDEAALKELEAMMA 223
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Uncharacterized (protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GI76_9STRA)

HSP 1 Score: 166 bits (420), Expect = 6.840e-44
Identity = 108/220 (49.09%), Postives = 148/220 (67.27%), Query Frame = 1 
Query:    1 LRTRQHRENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPAD-DLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPS------TTPVSAPVAVEEDEDARALRELEASMAM 639
            L T + RE HI  K+ +QL +AK KS+AKDKRGA+FALKRKKMYE E+ KL GARMTLE+QI+ LE +++NM+TFNAMRSGA  M+   G++ VD VD++MDDI++EM  A++I  AI++P   +L+DDD L  EL+ +EE  +EE   + PAV  AR       +   V  + +P  Y+LP  P+      T P+   V  E++E+  ALR LE+SMAM
Sbjct:   30 LDTLEKREQHICTKVSSQLQEAKKKSAAKDKRGAIFALKRKKMYENEIEKLQGARMTLETQIMTLESAHVNMETFNAMRSGAGQMKAIHGQISVDTVDNIMDDIQEEMATADEISRAISQPVGTELYDDDELEAELEAMEELSVEE---SKPAVAEAR-------KPSKVTNTPIP-AYNLPEPPTHKVENRTNPI---VGAEDEEELEALRRLESSMAM 235
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYN0_HETAK)

HSP 1 Score: 166 bits (420), Expect = 7.040e-44
Identity = 101/214 (47.20%), Postives = 140/214 (65.42%), Query Frame = 1 
Query:    1 LRTRQHRENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPSTTPVSAPVAVEED-EDARALRELEASMAM 639
            + T   RE  I  KI  Q  +AKAK   KD+RGA+F LKRKKMYE E++KLNGA++ LE QI ALEG+++N + F A R+   A++ ARG +D D V++ +DDI +EM++A +IG+AI+RPA +LF+D+ LL+EL  LEE  +EE LLA PA P   P A       AVAE      YDLP+ P+    ++ +  + D +D  ALR LEA +A+
Sbjct:   29 IETLDKRETFIAAKIVQQTNEAKAKLKKKDQRGAMFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINTEAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPAQELFEDEELLDELRELEELGVEEDLLAAPAAPVRAPPAA------AVAEEAKQPAYDLPAAPTGAVAASAIQGDVDADDLDALRALEAELAV 236
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B2J5_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.200e-43
Identity = 109/206 (52.91%), Postives = 138/206 (66.99%), Query Frame = 1 
Query:   19 RENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADD-LFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPSTTPVSAPVAVEEDEDARALRELEASM 633
            RE HI  KI AQ  +AKAK + KDK+GAL  +KRKKM+E E+ K+ GARMTLE Q++ALE + MNMQTF AM  G +A++ ARG +D D + D MDDI++EMD A+ I  A+  P DD L DDD LL EL+M+E+ DLE++LL PP+VPT+ P           AE  +    DLP  P T+ V     VE+DE A ALRELEASM
Sbjct:   84 REAHIGTKITAQTAEAKAKLAKKDKKGALICMKRKKMFENEITKIQGARMTLEQQMMALENAAMNMQTFGAMNEGKQALKAARGGMDADTIGDTMDDIREEMDEADAIATALGAPLDDALEDDDELLAELNMMEQDDLEDKLLNPPSVPTSTPVG--------AAEDIL----DLPDAP-TSQVVVDGDVEDDELA-ALRELEASM 275
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.350e-12499.52protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.790e-8097.22protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Snf7-domain-containing3.550e-6966.36protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized2.910e-4752.15protein n=1 Tax=Thraustotheca clavata TaxID=74557 ... [more]
Uncharacterized3.190e-4752.38protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A48... [more]
Hypothetical6.870e-4548.34protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
Hypothetical2.490e-4449.77protein n=2 Tax=Corethron hystrix TaxID=216773 Rep... [more]
Uncharacterized6.840e-4449.09protein n=1 Tax=Albugo candida TaxID=65357 RepID=A... [more]
Hypothetical7.040e-4447.20protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical1.200e-4352.91protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9793contigE_fasciculatus_S2_contig9793:1045..3918 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score317.4
Seed ortholog evalue4.1e-84
Seed eggNOG ortholog2880.D8LAT7
Preferred nameCHMP4C
Model size1823
KEGG koko:K12194,ko:K16075,ko:K17085,ko:K19306
KEGG TC1.A.35.5
KEGG Pathwayko04144,ko04217,map04144,map04217
KEGG ModuleM00412
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000075,GO:0000278,GO:0000280,GO:0000281,GO:0000815,GO:0000819,GO:0000902,GO:0000904,GO:0000910,GO:0000920,GO:0001894,GO:0001919,GO:0003006,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005768,GO:0005770,GO:0005771,GO:0005829,GO:0005886,GO:0006508,GO:0006511,GO:0006605,GO:0006612,GO:0006620,GO:0006623,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0006886,GO:0006900,GO:0006914,GO:0006950,GO:0006996,GO:0006997,GO:0006998,GO:0007009,GO:0007032,GO:0007033,GO:0007034,GO:0007040,GO:0007041,GO:0007049,GO:0007059,GO:0007080,GO:0007088,GO:0007093,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0008333,GO:0008356,GO:0008565,GO:0008593,GO:0009056,GO:0009057,GO:0009268,GO:0009405,GO:0009628,GO:0009653,GO:0009838,GO:0009892,GO:0009894,GO:0009895,GO:0009898,GO:0009966,GO:0009968,GO:0009987,GO:0010008,GO:0010035,GO:0010038,GO:0010226,GO:0010256,GO:0010324,GO:0010389,GO:0010458,GO:0010467,GO:0010506,GO:0010507,GO:0010564,GO:0010639,GO:0010646,GO:0010648,GO:0010824,GO:0010941,GO:0010948,GO:0010972,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015865,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0016020,GO:0016021,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016241,GO:0016242,GO:0016322,GO:0016358,GO:0016485,GO:0017145,GO:0019058,GO:0019068,GO:0019222,GO:0019538,GO:0019899,GO:0019941,GO:0019953,GO:0021700,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030030,GO:0030117,GO:0030154,GO:0030163,GO:0030182,GO:0030425,GO:0030447,GO:0030496,GO:0031090,GO:0031175,GO:0031224,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031410,GO:0031468,GO:0031505,GO:0031967,GO:0031975,GO:0031982,GO:0032465,GO:0032466,GO:0032501,GO:0032502,GO:0032504,GO:0032509,GO:0032511,GO:0032886,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033554,GO:0034059,GO:0034613,GO:0034622,GO:0035690,GO:0036176,GO:0036177,GO:0036178,GO:0036257,GO:0036258,GO:0036293,GO:0036294,GO:0036438,GO:0036452,GO:0036477,GO:0039702,GO:0040007,GO:0040008,GO:0040012,GO:0040017,GO:0042058,GO:0042059,GO:0042078,GO:0042221,GO:0042493,GO:0042551,GO:0042592,GO:0042802,GO:0042803,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043162,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043328,GO:0043632,GO:0043900,GO:0043901,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044087,GO:0044088,GO:0044126,GO:0044130,GO:0044144,GO:0044146,GO:0044182,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044297,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044878,GO:0045047,GO:0045169,GO:0045184,GO:0045229,GO:0045324,GO:0045746,GO:0045786,GO:0045926,GO:0045930,GO:0046605,GO:0046618,GO:0046755,GO:0046907,GO:0046983,GO:0048132,GO:0048285,GO:0048468,GO:0048469,GO:0048475,GO:0048477,GO:0048518,GO:0048519,GO:0048523,GO:0048524,GO:0048583,GO:0048585,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048813,GO:0048856,GO:0048858,GO:0048869,GO:0048871,GO:0050000,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051117,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051258,GO:0051259,GO:0051260,GO:0051276,GO:0051301,GO:0051302,GO:0051303,GO:0051310,GO:0051493,GO:0051503,GO:0051603,GO:0051604,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051782,GO:0051783,GO:0060236,GO:0060249,GO:0060255,GO:0060548,GO:0061024,GO:0061640,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070482,GO:0070507,GO:0070676,GO:0070727,GO:0070887,GO:0070925,GO:0070938,GO:0070972,GO:0071214,GO:0071241,GO:0071248,GO:0071285,GO:0071453,GO:0071454,GO:0071467,GO:0071554,GO:0071555,GO:0071695,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071852,GO:0071944,GO:0071985,GO:0072594,GO:0072599,GO:0072657,GO:0072665,GO:0072666,GO:0080171,GO:0090148,GO:0090150,GO:0090169,GO:0090224,GO:0090543,GO:0090611,GO:0097320,GO:0097447,GO:0097458,GO:0097708,GO:0098552,GO:0098562,GO:0098588,GO:0098722,GO:0098728,GO:0098796,GO:0098805,GO:0098813,GO:0104004,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:0140014,GO:1901184,GO:1901185,GO:1901214,GO:1901215,GO:1901264,GO:1901564,GO:1901565,GO:1901575,GO:1901673,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902115,GO:1902116,GO:1902186,GO:1902188,GO:1902749,GO:1902750,GO:1902902,GO:1903047,GO:1903900,GO:1903902,GO:1904669,GO:1990635,GO:2000785
Exons3
EggNOG free text desc.vacuolar transport
EggNOG OGsKOG1656@1,KOG1656@2759
Ec32 ortholog descriptionSnf7 family
Ec32 orthologEc-27_006420.1
EC2.1.1.309
Cds size516
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03009,ko04131,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842622.5147896-UTR-E_fasciculatus_S2_contig9793:1044..11701696842622.5147896-UTR-E_fasciculatus_S2_contig9793:1044..1170Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9793 1045..1170 +
1696842622.5665243-UTR-E_fasciculatus_S2_contig9793:2737..39181696842622.5665243-UTR-E_fasciculatus_S2_contig9793:2737..3918Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9793 2738..3918 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842622.5294623-CDS-E_fasciculatus_S2_contig9793:1170..12271696842622.5294623-CDS-E_fasciculatus_S2_contig9793:1170..1227Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9793 1171..1227 +
1696842622.5447135-CDS-E_fasciculatus_S2_contig9793:1623..17791696842622.5447135-CDS-E_fasciculatus_S2_contig9793:1623..1779Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9793 1624..1779 +
1696842622.5559351-CDS-E_fasciculatus_S2_contig9793:2434..27371696842622.5559351-CDS-E_fasciculatus_S2_contig9793:2434..2737Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9793 2435..2737 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9793.17794.1prot_E_fasciculatus_S2_contig9793.17794.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9793 1171..2737 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9793.17794.1

>prot_E_fasciculatus_S2_contig9793.17794.1 ID=prot_E_fasciculatus_S2_contig9793.17794.1|Name=mRNA_E_fasciculatus_S2_contig9793.17794.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=172bp
MYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRL
DVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEAD
LEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPSTTPVSAP
VAVEEDEDARALRELEASMAM*
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mRNA from alignment at E_fasciculatus_S2_contig9793:1045..3918+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9793.17794.1 ID=mRNA_E_fasciculatus_S2_contig9793.17794.1|Name=mRNA_E_fasciculatus_S2_contig9793.17794.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2874bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9793:1045..3918+ (Ectocarpus fasciculatus EfasUO2)
TTGCGTACTCGACAACACAGGGAAAACCACATCCAGAAGAAGATCAAGGC
GCAACTGCTTGATGCCAAGGCGAAGAGCAGCGCAAAGGATAAGAGAGGGG
CCCTGTTCGCCCTCAAGAGAAAGAAGATGTACGAAGGGGAGGTCAACAAG
CTCAACGGAGCCCGCATGACGCTGGAGAGCCAGGTGGGTTAGTGATGGTG
ATGGCAAGGCCAGGTTGAGCCTCGTGGGCGGAAGTGTACGCGTGCCTGTT
GCTGGTGATGGAGGAAAGCTGGCCTTGCGTTGCTCGAGCTTACTTCCGCC
AAGAGCTACAATTTTCGGGTTTTAAACTAGATTTGTATGTTTGTTTTCTG
ATTTGTGGCTAGCGAGAGGATCTCCCGGGCGATACTGACTGCACATTGGT
ACTAGGGCTGTGTTGTTGAAAGAGGAGATGATGCTTGCCAAGATAATCGA
AGCGATAGTGTATGTATGGACTACGGTGAGTTGTGAAACCCCCACCTCGT
GACTGCACTCCCTTCCCTCCCCCTCGGCTAACCGCCCTCCTCCGCGTGTG
ACACTATCCTATCCACCGCCCTGCGTCAGATCATCGCTCTAGAGGGGTCG
AACATGAACATGCAGACGTTCAACGCGATGCGGAGCGGTGCGAAGGCGAT
GCAGGACGCTAGGGGGCGTCTGGACGTTGACCAGGTGGACGATGTGATGG
ACGACATCAAGGACGAGATGGACATCGCGGAGCAGGTGTGTGGTTGTTGT
TGTTGCTGCTGCTGTTGTTGATGTGGTCGTGGCGATTACCACCAACGATA
CTCGAGGTTTGGTTGTGTTCCATGCGCCGCCTTTTTTTGCGGGGCGTCAA
ACAGATATCGACATCGTTTTTGTTTTTTTCGCGCACAAAACGAAGAGGAC
CGCCTCGAAACACCCGGCCAAGTCATTGAGAAGATTCTTCCAGCTGCACC
CTGTTGCAAAAGCTTGCCCTCGGGATGACCGTTGTCGTACCCACACCCCT
TCCCTGGCATTTAGTGAGCTGGGTTACTTGCACCTCCCTCCGTGTCTGGT
GTCAGAAAAAAAGTAACTCATCATCTGCAAACTGCTGATTGGTGTCGGAC
GCGGCAGGGCATTCGATAAGTTTTTTCCTTATGTACAGTAGCGCTGGTCT
AATTCAACAGCCTGTGGGGGCATCAATGACCAAACACGTCATCTATTCAA
CCGTATCAATTCAACCGTTTCAACATCCCCACCCAAAAGCCATCTATCAA
ACCCGGCGTCATGTTCGGAACGTTTTCCCGATGTGTGCAAAGTCCCGGTC
TATTTCGCTTCAGCAGCCCGTGGCGGCATCACCAGCCATATATATCACCA
ATTCATTCAACCACCAATCGTCCTCCACAAAATCGATCAGATCGGAGACG
CGATCGCGAGGCCGGCGGACGACCTCTTCGATGACGACGCCCTCCTCGAG
GAGTTAGACATGCTCGAGGAGGCCGACCTTGAGGAGCAGCTCCTCGCACC
CCCCGCCGTGCCGACGGCTCGGCCTGCGGCGCCCCAGGGAGTCGAGCAGC
CCGCGGTGGCCGAGTCCAAGGTACCCGAAGGGTACGACTTGCCATCGGTG
CCGTCGACAACGCCCGTCAGCGCGCCCGTAGCGGTGGAGGAAGACGAGGA
TGCTCGAGCACTGCGGGAGCTGGAGGCCAGCATGGCGATGTGATCTTGAT
TGGGCGGCAGGGGGGGGGGGGTGCAGTCGGCGAAGCATGTAGACATGACG
CAGGTGGTGGATGGATACGGGGAGGAGGCGTGTTGGTGTTTATGTCTTGT
GTCGCCCTCTTCGGTGTAGGGGCGGAGCTGGGACGACTTGCACTCTCCGT
CCTTGTCTCGGTTGGCCTTCGTTTCTTGTGCTCCCCGCCGGTTTTGACGG
CAAGTCGGCGGGGTCGGTTGTTTCTAGTATGATACGGCCGGGCACCACAA
GCGGGGGTAATGTAAATGGGATGTGGGGTTGGGTCGCAACACGGACTACC
TTGGCTTTGTGTTGCCTGCCCCGTACCCGAAATGCCTGTTTGACCTACGC
TGCTCCCTCTTCCCTGTTGCTCTTGCGTCTGTGCCGTGTGGCTAACTAAG
CTCGGGTACACGTGTACGGTAGGCAGCCCGGCTCGCGAAGCGTCATGTCA
TGCTGTTTGGTAGTGGGAGAGGCGTGGTCCTGATGGTCGTGTCGAGAGGT
GTCATGGGGACAGGCAATGCGACAGCTGAAGTTTTGAACACGGCTAGTCG
GCACTGGGCCTCGTTGTGGAATCCATGATCCCGCGAGCAAAGCGTGTCAC
GACTGTAGTAGAAACCTTCACATAGTTAAATCTTAAATCTGAACGGACTG
TTATTTGTATTGTGTATTTTCCGGAAGGCGGCGGGGCAACCGATGAGTGC
GGTGGAATCAGCGGGAACTCACCGGTGTCTGTCCCGACATGTACACGTGA
CAGTAACAGCTGCATACATGAGCTCGGAGCAGCAGCAGCAGCACGTTTTA
TTGTTTGCTATGCGGGTAAATCTGTAAGCTACGTCTATTGTCTTTCTCCC
GTTCGACGGCACATCGAGGAGGGGGGTTGAAATTTGATTTGAACGTTGCA
TGTTGGTTGGCTGCCAAATTTATGGCATGGTGTTGGTTTGTCCTCGCGGG
TAGAGATTCTCGCCCGAAAAAACGCACTTGCCGGCTACAATAAATAGCTT
GCCTTGACGGCACCAAAACACGTATCGTTTCGGTCCCATTCTACAACTTC
CCGGGGTAATCAGTTTTTCGGCTGGTCGTCAACAACGACATCGAATACAA
ACCCAATCGGTCAGATGGGAGGGTTCTCAGTGTCCAAGTTTGAAGCTGAA
GGCACAACGTACCATGCCATTATT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9793:1045..3918+

>mRNA_E_fasciculatus_S2_contig9793.17794.1 ID=mRNA_E_fasciculatus_S2_contig9793.17794.1|Name=mRNA_E_fasciculatus_S2_contig9793.17794.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=516bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9793:1045..3918+ (Ectocarpus fasciculatus EfasUO2)
ATGTACGAAGGGGAGGTCAACAAGCTCAACGGAGCCCGCATGACGCTGGA
GAGCCAGATCATCGCTCTAGAGGGGTCGAACATGAACATGCAGACGTTCA
ACGCGATGCGGAGCGGTGCGAAGGCGATGCAGGACGCTAGGGGGCGTCTG
GACGTTGACCAGGTGGACGATGTGATGGACGACATCAAGGACGAGATGGA
CATCGCGGAGCAGATCGGAGACGCGATCGCGAGGCCGGCGGACGACCTCT
TCGATGACGACGCCCTCCTCGAGGAGTTAGACATGCTCGAGGAGGCCGAC
CTTGAGGAGCAGCTCCTCGCACCCCCCGCCGTGCCGACGGCTCGGCCTGC
GGCGCCCCAGGGAGTCGAGCAGCCCGCGGTGGCCGAGTCCAAGGTACCCG
AAGGGTACGACTTGCCATCGGTGCCGTCGACAACGCCCGTCAGCGCGCCC
GTAGCGGTGGAGGAAGACGAGGATGCTCGAGCACTGCGGGAGCTGGAGGC
CAGCATGGCGATGTGA
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