prot_E_fasciculatus_S2_contig979.17788.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig979.17788.1
Unique Nameprot_E_fasciculatus_S2_contig979.17788.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length431
Homology
BLAST of mRNA_E_fasciculatus_S2_contig979.17788.1 vs. uniprot
Match: D8LRA9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRA9_ECTSI)

HSP 1 Score: 470 bits (1210), Expect = 2.650e-158
Identity = 338/419 (80.67%), Postives = 346/419 (82.58%), Query Frame = 0
Query:   26 PEKLPEVFSVHKGEVVKTETFGAFIKLDGYRKHGLVHCSQMASYRVEDVTDVCKVGDTVYAKVIEVTDGAEPREQRIALSMKLVNQADGKDLDPSNAEAETDAQRRRPAGGGDRAPVQLEAVFNTNCTKCGVHGHLSIDCFSRGDKKYELVDEEDPRDSGQGGAGXXXXXXMRGVHREASPPRGGGVLAGGRGRGATMPAWMTDLGLMDKLNKKSHRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRHKKSSXXXXXXXXXXXXXXXX-------SGKRDDRRGYSDSGSDDSG------DRGRVSMNGTGGGGRXXGRDENGSMRRRSXXXGDNGRGGXGRKGRSHSRQR-EXXXXXXXXXXXXXXXXXXXXRGENDRGRFDDAPVAEAVGVGDGGRWKPRGDSDRSQSR 430
            PEKLPEVFSVHKGEVVKTETFGAFIKLDGYRKHGLVHCSQMASYRVEDVTDVCKVGDTVYAKVIEVTDGA+PREQRIALSMKLVNQADGKDLDPSNAEAETDAQR+RPAGGGDRAPVQLEAVFNT CTKCGVHGHLSIDCFSRG KKYELVDEEDPRD+G+GGAG      MRGVHRE  PP GGG LAGGRGRGATMPAWM DLGL+DKLNKKSHRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +HKKS   XXXXXXXXXXXXXX       SG RD RRGYSDSGSDD        DRGRVS NG GGG R   RDENGSMRR+S  X       X     S SRQR E   XXXXXXXXXXXXXXXXX        FDDAP+ EA GVGDGGRWKPRGDSDRS SR
Sbjct:  231 PEKLPEVFSVHKGEVVKTETFGAFIKLDGYRKHGLVHCSQMASYRVEDVTDVCKVGDTVYAKVIEVTDGADPREQRIALSMKLVNQADGKDLDPSNAEAETDAQRKRPAGGGDRAPVQLEAVFNTTCTKCGVHGHLSIDCFSRGGKKYELVDEEDPRDNGRGGAGGGTGNGMRGVHRE--PPHGGGALAGGRGRGATMPAWMNDLGLVDKLNKKSHRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----KHKKSGHKXXXXXXXXXXXXXXXXXXXXSSGNRDGRRGYSDSGSDDXXXXXXXXDRGRVSSNGMGGGTRGSWRDENGSMRRQSRSXXXXXXXXXXXXXXSRSRQRGEGGGXXXXXXXXXXXXXXXXXXXXXXXXXFDDAPLREAAGVGDGGRWKPRGDSDRSHSR 643          
BLAST of mRNA_E_fasciculatus_S2_contig979.17788.1 vs. uniprot
Match: A0A835YH79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH79_9STRA)

HSP 1 Score: 167 bits (423), Expect = 2.190e-42
Identity = 104/271 (38.38%), Postives = 140/271 (51.66%), Query Frame = 0
Query:   27 EKLPEVFSVHKGEVVKTETFGAFIKLDGYRKHGLVHCSQMASYRVEDVTDVCKVGDTVYAK------------------------------------VIEVTDGAEPREQRIALSMKLVNQADGKDLDPSNAEAETDAQRRRPAGG------------GDRAPVQLEAVFNTNCTKCGVHG-------------------HLSIDCFSRGDKKYELVDEEDPRDSGQGGAGXXXXXXMRGVHR--EASPPRGGGVLAGGRGRGATMPAWMT 228
            + LP ++SVH GEV   + FG F+   G+RKHGLVH SQ+A YRVEDV D   VGD V+ K                                    VI+V +GA PRE ++A+SMKLV+Q+ GKDLDP+N EA+ +A RR   GG              + P++L AVFNT C+KCG                      H+S+DCFSRG +KYELV E+   + G+   G      M+GV +  +  PP     ++ GRG+ AT+P+WMT
Sbjct:  283 DTLPALYSVHHGEVASVQDFGCFVSAPGHRKHGLVHKSQLAQYRVEDVADAVAVGDKVWVKYQXXXXXXXXXXXXXXXXXXKGGXXXXXXXXXXXXKVIDVQEGATPRESKVAMSMKLVDQSTGKDLDPTNEEAQDEAARRMGGGGXRXXXXXXXXXXAPKGPIELGAVFNTVCSKCGAXXXXXXXXXXXXXXXXXXXXXHMSVDCFSRGGQKYELVTED--LEGGEPAGG------MKGVAKPPDVPPPS----VSMGRGKAATLPSWMT 541          
BLAST of mRNA_E_fasciculatus_S2_contig979.17788.1 vs. uniprot
Match: A0A556TPD5_BAGYA (Nucleolar protein of 40 kDa n=4 Tax=Siluroidei TaxID=1489793 RepID=A0A556TPD5_BAGYA)

HSP 1 Score: 149 bits (377), Expect = 5.720e-39
Identity = 78/159 (49.06%), Postives = 108/159 (67.92%), Query Frame = 0
Query:   25 GPEKLPEVFSVHKGEVVKTETFGAFIKLDGYRKHGLVHCSQMASYRVEDVTDVCKVGDTVYAKVI--EVTDGAEPREQRIALSMKLVNQADGKDLDPSNAEAETDAQRRRPAGGGDRAPVQLEAVFNTNCTKCGVHGHLSIDCFSR-GDKKYELVDEED 180
            G + LPE++SV +GEV    T+GAF+K+ GYRKHGLVH + M++ RV++ +++  VG+ V+ KVI  E+TD     + ++A SMK VNQ  G+DLDP+N  AE DA+RRR         + LEAV NT C KCG  GH + DCFS+ G+K+Y LV EE+
Sbjct:   11 GLDGLPELYSVIRGEVASVTTYGAFVKIPGYRKHGLVHKNDMSASRVDNPSEIVDVGEQVWIKVIGREITDD----KIKLAFSMKAVNQGTGRDLDPNNVMAEQDARRRRQFRDHTSQKITLEAVLNTTCKKCGCKGHFAKDCFSQPGEKQYSLVPEEE 165          
BLAST of mRNA_E_fasciculatus_S2_contig979.17788.1 vs. uniprot
Match: UPI001C0580E8 (nucleolar protein of 40 kDa n=1 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C0580E8)

HSP 1 Score: 149 bits (375), Expect = 1.290e-38
Identity = 77/158 (48.73%), Postives = 106/158 (67.09%), Query Frame = 0
Query:   25 GPEKLPEVFSVHKGEVVKTETFGAFIKLDGYRKHGLVHCSQMASYRVEDVTDVCKVGDTVYAKVIEVTDGAEPREQRIALS--MKLVNQADGKDLDPSNAEAETDAQRRRPAGGGDRAPVQLEAVFNTNCTKCGVHGHLSIDCFSRGDKKYELVDEED 180
            G + LP +FS+ KGEVV  +T+GAF++L GY+K GLVH S+M++ RVE+ +++  VG+ V+ KVI    G E + +++ LS  MK VNQ  G+DLDP+N  AE DA+RRR      R  + LEAV NT C+KCG  GH + DCFS    +Y L+ EED
Sbjct:   13 GLDGLPPLFSIAKGEVVSVQTYGAFVRLPGYKKEGLVHVSEMSASRVENASEIVDVGEKVWIKVI----GREIQGEKVKLSFSMKSVNQGTGQDLDPNNVMAEQDARRRRMFKDETRNKITLEAVLNTTCSKCGCRGHFTKDCFSTPGSQYALLPEED 166          
BLAST of mRNA_E_fasciculatus_S2_contig979.17788.1 vs. uniprot
Match: A0A3P8WCJ4_CYNSE (Zinc finger CCHC-type containing 17 n=3 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8WCJ4_CYNSE)

HSP 1 Score: 149 bits (375), Expect = 1.320e-38
Identity = 78/164 (47.56%), Postives = 106/164 (64.63%), Query Frame = 0
Query:   25 GPEKLPEVFSVHKGEVVKTETFGAFIKLDGYRKHGLVHCSQMASYRVEDVTDVCKVGDTVYAKVIEVTDGAEPREQRIALS--MKLVNQADGKDLDPSNAEAETDAQRRRPAGGGDRAPVQLEAVFNTNCTKCGVHGHLSIDCFSRGDKKYELVDEEDPRDSGQ 186
            G E LP ++S+ KGEVV  +T+GAF++L GYRK GLVH S+M++ RVE  +++  VG+ V+ KVI    G E R  ++ +S  MK VNQ  G+DLDP+N  AE DA+RRR         + LEAV NT C+KCG  GH + DCFS    +Y L+ EED ++  Q
Sbjct:   14 GLEGLPPIYSILKGEVVSVQTYGAFVRLPGYRKEGLVHVSEMSASRVEKASEIVDVGEQVWIKVI----GREIRGDKVKMSFSMKAVNQGTGRDLDPNNVNAEQDARRRRQFRDQTGNKITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYALLPEEDDKEPQQ 173          
BLAST of mRNA_E_fasciculatus_S2_contig979.17788.1 vs. uniprot
Match: UPI0018861AB2 (nucleolar protein of 40 kDa n=1 Tax=Syngnathus acus TaxID=161584 RepID=UPI0018861AB2)

HSP 1 Score: 149 bits (375), Expect = 1.480e-38
Identity = 81/164 (49.39%), Postives = 104/164 (63.41%), Query Frame = 0
Query:   25 GPEKLPEVFSVHKGEVVKTETFGAFIKLDGYRKHGLVHCSQMASYRVEDVTDVCKVGDTVYAKVIEVTDGAEPREQRIALS--MKLVNQADGKDLDPSNAEAETDAQRRRPAGGGDRAPVQLEAVFNTNCTKCGVHGHLSIDCFSRGDKKYELVDEEDPRDSGQ 186
            G E LP +FS+ KGEVV  +T+GAF++L GY+K GLVH S+M+S RVE   +V  VG+ V+ KVI    G E   ++I LS  MK VNQ  G+DLDP+N  AE DA+RRR         + LEAV NT CTKCG  GH + DC+S    +Y LV EE   ++ Q
Sbjct:   10 GLEGLPPLFSISKGEVVSVQTYGAFVRLPGYKKEGLVHVSEMSSTRVESAAEVVDVGEKVWIKVI----GREKNGEKIKLSFSMKAVNQGTGRDLDPNNVMAEQDARRRRQFRDHTGNRITLEAVLNTTCTKCGCKGHFTKDCYSAPGLQYALVPEEGDEETQQ 169          
BLAST of mRNA_E_fasciculatus_S2_contig979.17788.1 vs. uniprot
Match: A0A1S3Q0U9_SALSA (nucleolar protein of 40 kDa n=11 Tax=Protacanthopterygii TaxID=41705 RepID=A0A1S3Q0U9_SALSA)

HSP 1 Score: 149 bits (376), Expect = 1.620e-38
Identity = 78/157 (49.68%), Postives = 103/157 (65.61%), Query Frame = 0
Query:   25 GPEKLPEVFSVHKGEVVKTETFGAFIKLDGYRKHGLVHCSQMASYRVEDVTDVCKVGDTVYAKVIEVTDGAEPREQRIALS--MKLVNQADGKDLDPSNAEAETDAQRRRPAGGGDRAPVQLEAVFNTNCTKCGVHGHLSIDCFSRGDKKYELVDEE 179
            G + LP ++S+ KGEV   +T+GAFIK+ GYRK GLVH S++++ RVE+V +V  VG+ V+ KVI    G E R+ ++ LS  MK VNQ  GKDLDP+N  AE D +RRR    G    + LEAV NT C KCG  GH + DCFS    +Y+L+ EE
Sbjct:   13 GLDGLPAMYSIVKGEVASVQTYGAFIKIPGYRKQGLVHISELSACRVENVAEVVDVGEQVWIKVI----GREMRDDKVKLSFSMKAVNQGTGKDLDPNNVIAEQDERRRRQFKDGTGRRITLEAVLNTTCKKCGCKGHFAKDCFSAPGLQYDLIPEE 165          
BLAST of mRNA_E_fasciculatus_S2_contig979.17788.1 vs. uniprot
Match: A0A1A7YY55_9TELE (Zinc finger, CCHC domain containing 17 n=2 Tax=Nothobranchiidae TaxID=405002 RepID=A0A1A7YY55_9TELE)

HSP 1 Score: 146 bits (369), Expect = 2.930e-38
Identity = 76/157 (48.41%), Postives = 104/157 (66.24%), Query Frame = 0
Query:   25 GPEKLPEVFSVHKGEVVKTETFGAFIKLDGYRKHGLVHCSQMASYRVEDVTDVCKVGDTVYAKVIEVTDGAEPREQRIALS--MKLVNQADGKDLDPSNAEAETDAQRRRPAGGGDRAPVQLEAVFNTNCTKCGVHGHLSIDCFSRGDKKYELVDEE 179
            G + LP ++S+ KGEVV  +T+GAF++L GYRK GLVH S+M++ RVE  +++  VG+ V+ KVI    G E + +++ LS  MK VNQ  G+DLDP+N +AE DA+RRR         + LEAV NT C+KCG  GH + DCFS    +Y LV EE
Sbjct:   13 GLDGLPPMYSIAKGEVVSVQTYGAFVRLPGYRKEGLVHVSEMSATRVESASEIVDVGEQVWIKVI----GREIQGEKVKLSFSMKAVNQGTGRDLDPNNVQAEQDARRRRQFRDQGSNRITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYALVPEE 165          
BLAST of mRNA_E_fasciculatus_S2_contig979.17788.1 vs. uniprot
Match: UPI001ED8BBBA (nucleolar protein of 40 kDa-like n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8BBBA)

HSP 1 Score: 148 bits (373), Expect = 4.320e-38
Identity = 77/150 (51.33%), Postives = 101/150 (67.33%), Query Frame = 0
Query:   32 VFSVHKGEVVKTETFGAFIKLDGYRKHGLVHCSQMASYRVEDVTDVCKVGDTVYAKVIEVTDGAEPREQRIALSMKLVNQADGKDLDPSNAEAETDAQRRRPAGGGDRAPVQLEAVFNTNCTKCGVHGHLSIDCF-SRGDKKYELVDEED 180
            V ++  GEV   +++GAF+++ G  K GL+H SQ++S  V+DV+DV   GD VY KVI VTDG      +IALSMKLVNQ  GKDLDP+  + + D  RR+    G R  ++LEAVFNT C+KCG  GH++ DCF S G K YEL+ EED
Sbjct:    8 VNTIFIGEVATVQSYGAFVRIPGISKQGLIHRSQVSSAPVDDVSDVLNRGDRVYCKVISVTDG------KIALSMKLVNQGSGKDLDPNGVQLQKDELRRKTFVPGTRKKIELEAVFNTTCSKCGTRGHMARDCFKSPGGKIYELLPEED 151          
BLAST of mRNA_E_fasciculatus_S2_contig979.17788.1 vs. uniprot
Match: UPI0019C8BB30 (nucleolar protein of 40 kDa n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI0019C8BB30)

HSP 1 Score: 147 bits (370), Expect = 5.360e-38
Identity = 76/158 (48.10%), Postives = 107/158 (67.72%), Query Frame = 0
Query:   25 GPEKLPEVFSVHKGEVVKTETFGAFIKLDGYRKHGLVHCSQMASYRVEDVTDVCKVGDTVYAKVI--EVTDGAEPREQRIALSMKLVNQADGKDLDPSNAEAETDAQRRRPAGGGDRAPVQLEAVFNTNCTKCGVHGHLSIDCFSR-GDKKYELVDEE 179
            G + LPE++S+ +GEVV    +GAF+K+ GYRKHGLVH + M++ RV++  ++  +G+ V+ KVI  E+TD     + ++A SMK VNQ  G+DLDP+N  AE D++RRR      R  + LEAV NT C KCG  GH + DCFS+ G+K+Y LV EE
Sbjct:   11 GLDGLPELYSILRGEVVSVTEYGAFVKIPGYRKHGLVHKNDMSASRVDNPGEIVDLGEQVWIKVIGREITDD----KIKLAFSMKAVNQGTGRDLDPNNVMAEQDSRRRRQFRDHTRQKITLEAVLNTTCKKCGCKGHFAKDCFSQPGEKQYSLVPEE 164          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig979.17788.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRA9_ECTSI2.650e-15880.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YH79_9STRA2.190e-4238.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A556TPD5_BAGYA5.720e-3949.06Nucleolar protein of 40 kDa n=4 Tax=Siluroidei Tax... [more]
UPI001C0580E81.290e-3848.73nucleolar protein of 40 kDa n=1 Tax=Melanotaenia b... [more]
A0A3P8WCJ4_CYNSE1.320e-3847.56Zinc finger CCHC-type containing 17 n=3 Tax=Cynogl... [more]
UPI0018861AB21.480e-3849.39nucleolar protein of 40 kDa n=1 Tax=Syngnathus acu... [more]
A0A1S3Q0U9_SALSA1.620e-3849.68nucleolar protein of 40 kDa n=11 Tax=Protacanthopt... [more]
A0A1A7YY55_9TELE2.930e-3848.41Zinc finger, CCHC domain containing 17 n=2 Tax=Not... [more]
UPI001ED8BBBA4.320e-3851.33nucleolar protein of 40 kDa-like n=1 Tax=Ischnura ... [more]
UPI0019C8BB305.360e-3848.10nucleolar protein of 40 kDa n=1 Tax=Silurus meridi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 31..107
e-value: 1.8E-13
score: 60.8
IPR003029S1 domainPFAMPF00575S1coord: 34..94
e-value: 1.8E-13
score: 50.6
IPR003029S1 domainPROSITEPS50126S1coord: 33..107
score: 15.971
NoneNo IPR availableGENE3D2.40.50.140coord: 27..118
e-value: 5.3E-25
score: 89.4
NoneNo IPR availablePANTHERPTHR15838:SF1NUCLEOLAR PROTEIN OF 40 KDAcoord: 3..300
IPR037320Nucleolar protein of 40kDaPANTHERPTHR15838FAMILY NOT NAMEDcoord: 3..300
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 152..165
score: 8.697
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 33..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig979contigE_fasciculatus_S2_contig979:2..4601 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig979.17788.1mRNA_E_fasciculatus_S2_contig979.17788.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig979 2..4601 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig979.17788.1 ID=prot_E_fasciculatus_S2_contig979.17788.1|Name=mRNA_E_fasciculatus_S2_contig979.17788.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=431bp
GGEGGGGGARGGGGGGGGGRGGGRGPEKLPEVFSVHKGEVVKTETFGAFI
KLDGYRKHGLVHCSQMASYRVEDVTDVCKVGDTVYAKVIEVTDGAEPREQ
RIALSMKLVNQADGKDLDPSNAEAETDAQRRRPAGGGDRAPVQLEAVFNT
NCTKCGVHGHLSIDCFSRGDKKYELVDEEDPRDSGQGGAGGGAGGGMRGV
HREASPPRGGGVLAGGRGRGATMPAWMTDLGLMDKLNKKSHRKEKKSKKK
KSDRRGDSDSDSSDDDDDDDQRKKHKKHHRHKKSSHKHKKSGHKHKKSRH
SSGKRDDRRGYSDSGSDDSGDRGRVSMNGTGGGGRGSGRDENGSMRRRSS
SSGDNGRGGGGRKGRSHSRQREGGGWGGRRGRSDSRRGGGGGRGENDRGR
FDDAPVAEAVGVGDGGRWKPRGDSDRSQSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR001878Znf_CCHC
IPR037320pNO40
IPR003029S1_domain
IPR022967S1_dom