mRNA_E_fasciculatus_S2_contig972.17722.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig972.17722.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT3_9PHAE) HSP 1 Score: 922 bits (2384), Expect = 0.000e+0 Identity = 588/750 (78.40%), Postives = 613/750 (81.73%), Query Frame = 1
Query: 7 LALAVLIVAVLPTGRAFCLHTGHRNCNSNGGGSVTRCGGLNHRNVFGRTTALSPLQPRRRMLRASWAGERLSGRARRLDHALEHEPEREREREDATVVAGPLWRRRSRRVFETGNMGMAMHTVVEGNRERRPVMPSVGISMAGAMPYPGGWQGGSTSSRSPPSSSAAITSISMHTAQECTHLLGPEAVKPRTDTKIGKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRGNNGPESDGVIVAAGNSTESLRLEDGVDIDQELVSRSPLLRTLAPVFRFFRSRAGLYGMMLGYVVFTLSQHISPVFVGMSLLTAIGPRPARKVLVLATQSLSVLTVASYLQDQFRHQVYPLPAVASGPSAPYAIVTGGSSGIGREIANELAGRGYNILLVARGKEGLKRAAKELTEASRSAAEVARREREEGVDDGRQASASRNPESRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGLEXXXXXXXXXXXXXXXXXXXXXVAPHLAEAVTARWFAADLGNATSTQAVYAEVQRLNLTVDILVNAAGLCRVGRVDNCAEEDLTSQLMLNVVGTSRLTRLFAKDFVTRRKGRIMVVSSVVSAAPNPTVAAYAASKSYLTSYAEALHSELEVSGVGVTCVMPGATRTSFQDNSGSTAALVWQLPLFSMEADEVAARAVEALMRGDRTVVPGWQNKLYVHVLAPLLPRKIVMSFAEAMWR 2256
LALA L+VAVL TG AFCL+TGH +CNS G GSVT CGGL R VFGR ALS + RR +LRASWAGERLSG ARRLD+ALEHEPE DATVVA L RR RRVFE GNMGMA TVVEG+R PVMP VGIS+ GA+ YP SSAA+ S+S+H AQECTHLLGPEAV+PRTDTK+GK R XXXXXXXXXXXXXXXXXXXXXX QRGNNGPE D V+V AGNSTESLRLEDGV++D+ELVSRSPLLRT+APVFRFFRSRAGLYGMMLGYVVFT+SQHISPVFVGMSLLTAIGPRPARKVLVLATQ LSVLTVASYLQDQFRHQVYPLP VASGPSAPYAIVTGGSSGIGREIANELAGRGYNILLVARGKEGLKRAAK+LTEASR AAEVARREREEG DDGRQASASR XXXXXXXXXXXXXX XXXXXXXXXXXXXXXX S+ LE VAPHLAEAVTARWFAADLGNATS QAVYAEVQRLNLTVDILVNAAGLCRVGRV+NCAEEDLTSQLMLNVVGTS+LTRLFAKDFV RRKGRIMVVSSVVSAAPNPTVAAYAASKSYLTS+AEALHSELEVSGVGVTCVMPGATRTSFQDNSGSTAALVWQLPLFSMEADEVAARAVEALMRGDRTVVPGWQNKLYVHVLAPLLPRKIVMSFAEAMWR
Sbjct: 20 LALAGLMVAVLRTGCAFCLYTGHLSCNSGGRGSVTHCGGLTRRGVFGRAKALSRSKTRRHILRASWAGERLSGHARRLDNALEHEPEXXXXXRDATVVARLLVRRHGRRVFEPGNMGMA--TVVEGDRP--PVMPFVGISIEGALTYP---------------SSAAVPSMSVHMAQECTHLLGPEAVRPRTDTKMGKNRGGAKASNGGSGXXXXXXXXXXXXXXXXXXXXXX----QRGNNGPEGDSVVVVAGNSTESLRLEDGVEVDKELVSRSPLLRTIAPVFRFFRSRAGLYGMMLGYVVFTVSQHISPVFVGMSLLTAIGPRPARKVLVLATQCLSVLTVASYLQDQFRHQVYPLPTVASGPSAPYAIVTGGSSGIGREIANELAGRGYNILLVARGKEGLKRAAKDLTEASREAAEVARREREEGEDDGRQASASRRDXXXXXXXXXXXXXXXXXXXCRSAXXXXXXXXXXXXXXXXTSKRNGSGAAVGLSSNSSSFIGPHSDRELEQERGKGQEREDAAAATA----VAPHLAEAVTARWFAADLGNATSAQAVYAEVQRLNLTVDILVNAAGLCRVGRVNNCAEEDLTSQLMLNVVGTSQLTRLFAKDFVRRRKGRIMVVSSVVSAAPNPTVAAYAASKSYLTSFAEALHSELEVSGVGVTCVMPGATRTSFQDNSGSTAALVWQLPLFSMEADEVAARAVEALMRGDRTVVPGWQNKLYVHVLAPLLPRKIVMSFAEAMWR 742
BLAST of mRNA_E_fasciculatus_S2_contig972.17722.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU78_ECTSI) HSP 1 Score: 465 bits (1197), Expect = 1.580e-149 Identity = 295/378 (78.04%), Postives = 298/378 (78.84%), Query Frame = 1
Query: 1126 VTGGSSGIGREIANELAGRGYNILLVARGKEGLKRAAKELTEASRSAAEVARREREEGVDDGRQASASRNPESRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SEGGLEXXXXXXXXXXXXXXXXXXXXXVAPHLAEAVTARWFAADLGNATSTQAVYAEVQRLNLTVDILVNAAGLCRVGRVDNCAEEDLTSQLMLNVVGTSRLTRLFAKDFVTRRKGRIMVVSSVVSAAPNPTVAAYAASKSYLTSYAEALHSELEVSGVGVTCVMPGATRTSFQDNSGSTAALVWQLPLFSMEADEVAARAVEALMRGDRTVVPGWQNKLYVHVLAPLLPRKIVMSFAEAMWR 2256
VTGGSSGIGREIANELAGRGYNILLVARGKEGLKRAAKELTEASR AAEVARREREEG DDGRQASAS XXXXXXXXXXXXXXXX XX SEGGLE VAP L EAVTARWFAADLGNATSTQ VQRLNLTVDILVNAAGLCRVGRV+NCAEEDLTSQLMLNVVGTS+LTRLFAKDFV RRKGRIMVVSSVVSAAPNPTVAAYAASKSYLTS+AEALHSELEVSGVGVTCVMPGATRTSFQDNSGSTAALVWQLPLFSMEADEVAARAVEALMRGDRTVVPGWQNKLYVHVLAPLLPRKIVMSFAEAMWR
Sbjct: 37 VTGGSSGIGREIANELAGRGYNILLVARGKEGLKRAAKELTEASREAAEVARREREEGGDDGRQASASXXXXXXXXXXXXXXXXXXXXXXXXSVMSSAXXATPSPSTSSAQTSKRNGSGAAIGLSSNSSRFIGPHSEGGLEQERGRGQEQEDAAAVGATA--VAPQLTEAVTARWFAADLGNATSTQ-----VQRLNLTVDILVNAAGLCRVGRVNNCAEEDLTSQLMLNVVGTSQLTRLFAKDFVRRRKGRIMVVSSVVSAAPNPTVAAYAASKSYLTSFAEALHSELEVSGVGVTCVMPGATRTSFQDNSGSTAALVWQLPLFSMEADEVAARAVEALMRGDRTVVPGWQNKLYVHVLAPLLPRKIVMSFAEAMWR 407
BLAST of mRNA_E_fasciculatus_S2_contig972.17722.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU77_ECTSI) HSP 1 Score: 206 bits (525), Expect = 1.960e-56 Identity = 124/177 (70.06%), Postives = 133/177 (75.14%), Query Frame = 1
Query: 7 LALAVLIVAVLPTGRAFCLHTGHRNCNSNGGGSVTRCGGLNHRNVFGRTTALSPLQPRRRMLRASWAGERLSGRARRLDHALEHEPEREREREDATVVAGPLWRRRSRRVFETGNMGMAMHTVVEGNRERRPVMPSVGISMAGAMPYPGGWQGGSTSSRSPPSSSAAITSISMHTAQ 537
LALA L+VAVL TG AFCLHTGH NCNS+G GSVT C GL R V+GR ALS + RRRMLRASWA ERLSG ARR+D+ALEH PE E E DATVVAGPL RRRSRRVFETGNMGMA TVVEG+R PVMPSVGISMAGA+PYP SSAA+ SISMHTAQ
Sbjct: 3 LALAGLMVAVLRTGCAFCLHTGHLNCNSDGKGSVTHCVGLTRRGVYGRAKALSRSKTRRRMLRASWAEERLSGHARRIDNALEHVPEHEHEHRDATVVAGPLVRRRSRRVFETGNMGMA--TVVEGDRP--PVMPSVGISMAGALPYP---------------SSAAVYSISMHTAQ 160
BLAST of mRNA_E_fasciculatus_S2_contig972.17722.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD17_9STRA) HSP 1 Score: 194 bits (492), Expect = 8.180e-51 Identity = 157/473 (33.19%), Postives = 212/473 (44.82%), Query Frame = 1
Query: 910 YVVFTLSQHISPVFVGMSLLTAIGPRPARKVLVLATQSLSVLTVASYLQDQFRHQVYPL---------------------PAVASGPSAPYAIVTGGSSGIGREIANELAGRGYNILLVARGKEGLKRAAKELTEASRSAAEVARREREEGVDDGRQASASRNPESRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGLEXXXXXXXXXXXXXXXXXXXXXVAPHLAEAVTARWFAADLGNATSTQAVYAEVQRL---NLTVDILVNAAGLCRVGRVDNCAEEDLTSQLMLNVVGTSRLTRLFAKDFVTRR-KGRIMVVSSVVSAAPNPTVAAYAASKSYLTSYAEALHSELEVSGVGVTCVMPGATRTSFQDNSGSTAALVWQLPLFSMEADEVAARAVEALMRGDRTVVPGWQNKLYVHVLAPLLPRKIVMSFAEAMW 2253
YV+ T H+ P++V S + P K L LAT+S VL ++S R++V PL A A+ APYA+VTG SSGIGR IA +LA +G+N++L+ R ++ L+ A+ L +R+A GR+ A H+ EA DL + AVY +V+ L +ILVN+AG+ + EE L LM+N V T+RLT+LFA+D R+ GRIM+VSS+ +A PNP VA YAA+KSYLTS A+AL ELE GVGVTC+MPGAT T+FQ S + A V++ P M +EVA + VE ++RGD +V GW NKL V+V PLLPRKI M +A W
Sbjct: 4 YVLNTAKTHVLPMYVAASAAQFLSPFWLAKGLQLATRSFFVLFMSSLGVHALRNRVAPLVPPVTRQQXXXXXDASDAQPQDASAAAEGAPYAVVTGASSGIGRAIAADLARQGWNVVLIGRNRDALREHARALKREARAA--------------GRRLQA-------------------------------------------------------------------------------------------------HVVEA--------DLAVDATPDAVYEQVRALCAEGTQPEILVNSAGVAWDCEFADLPEERLQDMLMINCVATTRLTQLFARDMKERKASGRIMIVSSITAAMPNPKVAVYAATKSYLTSLAQALSVELEPHGVGVTCLMPGATYTAFQARSNAAGARVFKHPRLCMTPEEVARQGVEGMLRGDSLIVTGWMNKLMVNVFEPLLPRKIGMLLVQAFW 357
BLAST of mRNA_E_fasciculatus_S2_contig972.17722.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BV49_9STRA) HSP 1 Score: 156 bits (395), Expect = 4.280e-38 Identity = 87/203 (42.86%), Postives = 125/203 (61.58%), Query Frame = 1
Query: 1654 ADLGNATSTQAVYAEVQRLNLTVDILVNAAGLCRVGRVDNCAEEDLTSQLMLNVVGTSRLTRLFAKDFVTRRKGRIMVVSSVVSAAPN-PTVAAYAASKSYLTSYAEALHSELEVSGVGVTCVMPGATR-TSFQDNSGSTAALVWQLPLFSMEADEVAARAVEALMRGDRTVVPGWQNKLYVHVLAPLLPRKIVMSFAEAMWR 2256
ADL + +Y ++ L VDIL+N AG+ + ED+ S L LN ++L+RL+ K+ +R+GRI++VSS+ A P P +AYAA+K++ S+A +L ELE GVGVTC+MPGA + TSF S AL W+ P ++ A EVA+RAV A++ GD VVPGWQN+ + V PLLP++I + AE W+
Sbjct: 23 ADLSQPEAPAQIYEATKKNGLNVDILINNAGISQSKDFVETTIEDIDSILQLNTACVAKLSRLYGKEMKQKRRGRILIVSSICGALPAVPGSSAYAATKAFQKSFALSLGKELESYGVGVTCMMPGAVKDTSFSSRSSMDNALCWKYPWYARTAPEVASRAVRAVLSGDAEVVPGWQNRFLLRVAQPLLPQRITVLIAETSWK 225
BLAST of mRNA_E_fasciculatus_S2_contig972.17722.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGW2_HETAK) HSP 1 Score: 136 bits (343), Expect = 1.720e-32 Identity = 79/211 (37.44%), Postives = 115/211 (54.50%), Query Frame = 1
Query: 1633 VTARWFAADLGNATSTQAVYAEVQRLNLTVDILVNAAGLCRVGRVDNCAEEDLTSQLMLNVVGTSRLTRLFAKDFVTRRKGRIMVVSSVVSAAPNPTVAAYAASKSYLTSYAEALHSELEVSGVGVTCVMPGATRTSF----QDNSGSTAALVWQLPLFSMEADEVAARAVEALMRGDRTVVPGWQNKLYVHVLAPLLPRKIVMSFAEAMW 2253
V R DL + + A+Y +V+ L VD+LVN AG +G +++ E + +N V ++L LF K+ R GR++ V S+ A P P+V YA +K+YL + ++ L+ GVGVTC +PGATRT + + A +V+ LP F A+ VA AV A+ R D VPG N YVH+ L+PR ++M FAE MW
Sbjct: 9 VKTRTIVEDLASPDAAAAIYDQVKSKKLQVDVLVNNAGFVYIGELEDMPLETIDDLFNVNAVTPTKLMSLFGKEMAARGAGRVLSVGSIAGAHPLPSVDVYAGTKAYLAAVCQSAQYRLKRQGVGVTCALPGATRTEGFALEERRDPARAPMVFGLPGFVHTAERVAREAVGAMERADAVYVPGRLNSAYVHLFGLLVPRPLLMGFAERMW 219
BLAST of mRNA_E_fasciculatus_S2_contig972.17722.1 vs.
Match: Hypothetical (protein (Fragment) n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MQL3_9STRA) HSP 1 Score: 142 bits (359), Expect = 6.170e-31 Identity = 77/202 (38.12%), Postives = 119/202 (58.91%), Query Frame = 1
Query: 1654 ADLGNATSTQAVYAEVQRLNLTVDILVNAAGLCRVGRVDNCAEEDLTSQLMLNVVGTSRLTRLFAKDFVTRRKGRIMVVSSVVSAAP-NPTVAAYAASKSYLTSYAEALHSELEVSGVGVTCVMPGATR-TSFQDNSGSTAALVWQLPLFSMEADEVAARAVEALMRGDRTVVPGWQNKLYVHVLAPLLPRKIVMSFAEAMW 2253
ADL + ++ ++ L VD+LVN AG+C G + D+ + +N + L+ L+ KD +R+GR++ VSSVV A P P VA YAA+K++ + A ++ ELE +G+GVT + PGA + T F +S + +A W+LP + A EVA R V AL+ GD V PGWQN++++ +L P+LP++I E W
Sbjct: 521 ADLAKPDAAAMIHRTTKKAGLKVDVLVNNAGVCTHGELVESNPSDIQRMVQVNSGSVAMLSHLYGKDMKHQRRGRVLFVSSVVGAVPAGPGVAIYAATKAFEKALALSMSRELEKNGIGVTVMCPGAVKGTEFAKSSMTESAACWKLPFYPRSAPEVATRGVRALLAGDPEVYPGWQNRVFLKILGPVLPQRITTLIVEFAW 722
BLAST of mRNA_E_fasciculatus_S2_contig972.17722.1 vs.
Match: Short-chain (dehydrogenase n=1 Tax=marine bacterium AO1-C TaxID=1905359 RepID=A0A1Q3H505_9BACT) HSP 1 Score: 121 bits (304), Expect = 6.390e-27 Identity = 73/189 (38.62%), Postives = 112/189 (59.26%), Query Frame = 1
Query: 1675 STQAVYAEVQRLNLTVDILVNAAGLCRVGRVDNCAEEDLTSQLMLNVVGTSRLTRLFAKDFVTRRKGRIMVVSSVVSAAPNPTVAAYAASKSYLTSYAEALHSELEVSGVGVTCVMPGATRTSFQDNSGSTAALVWQLPLFSMEADEVAARAVEALMRGDRTVVPG--WQNKLYVHVLAPLLPRKIVMS 2235
+TQ +Y EV+ + VD L+N AG VG+ A E + + +N++ + LTR F +FV R G+I+ VSS VS P P A Y ASK+++TS++ AL EL+ SGV VT ++PGAT+T+F +SG +++ P E EVA EA++ G + G W +L + V APL+P+K+++
Sbjct: 66 ATQEIYEEVKEQEIEVDYLINNAGFGGVGKFHERAWEKDLAMIQVNILALTSLTRYFLPEFVKRNTGKILNVSSAVSLVPGPLQAIYFASKAFVTSFSNALSGELDQSGVTVTVLLPGATKTAFGASSGMEKTSIYKNP---SEPSEVAKDGYEAMLAGKLEIFSGVPWSQRLELSV-APLMPKKMLVE 250
BLAST of mRNA_E_fasciculatus_S2_contig972.17722.1 vs.
Match: SDR (family oxidoreductase n=1 Tax=Arabiibacter massiliensis TaxID=1870985 RepID=UPI0009BAD8F6) HSP 1 Score: 121 bits (304), Expect = 1.570e-26 Identity = 70/179 (39.11%), Postives = 104/179 (58.10%), Query Frame = 1
Query: 1651 AADLGNATSTQAVYAEVQRLNLTVDILVNAAGLCRVGRVDNCAEEDLTSQLMLNVVGTSRLTRLFAKDFVTRRKGRIMVVSSVVSAAPNPTVAAYAASKSYLTSYAEALHSELEVSGVGVTCVMPGATRTSFQDNSGSTAALVWQLPLFSMEADEVAARAVEALMRGDRTVVPGWQNKL 2187
A DL + + + ++ +VQ V+ILVN AG GR D + D+ + + ++V + LT +F + + R GRI+ +SS+++ P P A Y A+K ++ S++ AL EL+ +GV VT V PGATRT+F N+G A W+ FSM DE A R ALMRG+ V GW NK+
Sbjct: 57 ACDLSDPDAARTIFKKVQEAGKEVEILVNDAGYSPAGRFDELSVADVRAMIQVSVTSLAELTNVFMQPMLERGHGRILNMSSMMAKTPCPYNALYGAAKVFVLSFSTALAYELKGTGVSVTTVCPGATRTNFPKNAGIEGAPAWKY--FSMSTDETAIRVYRALMRGELCAVTGWVNKV 233
BLAST of mRNA_E_fasciculatus_S2_contig972.17722.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7W5_9STRA) HSP 1 Score: 129 bits (323), Expect = 2.150e-26 Identity = 71/217 (32.72%), Postives = 128/217 (58.99%), Query Frame = 1
Query: 1654 ADLGNATSTQAVYAEVQRLNLTVDILVNAAGLCRVGRVDNCAEEDLTSQLMLNVVGTSRLTRLFAKDFVTRRKGRIMVVSSVV---SAAPNPTVAAYAASKSYLTSYAEALHSELEVSGVGVTCVMPGATR-TSFQDNSGSTAALVWQLPLFSMEADEVAARAVEALMRGDRTVVPGWQNKLYVHVLAPLLPRKIVMSFAEAMWR*RGISAVRPIRQ 2292
ADL A + + + ++VDIL+N AG+ G + D+ ++LN + ++L+ L+ +D +R+GR++++SS+ + APN V Y A K++ S A ++ E+E GVGVTC+MPGA T F+ +SG+ ALVW LP +S D VA + V +L+ GD VPGWQN+++ +++ P++P+++ + + + + +++ + Q
Sbjct: 528 ADLSKADAAERIKQATDDAGISVDILINNAGVATEGLAVDADTSDIERMVLLNSLTYTKLSVLYGRDMKKKRRGRMLMMSSMAGLCNGAPNTAV--YGACKAFGKSLALSMAREMESYGVGVTCLMPGAVLDTDFRRSSGTRRALVWYLPFYSRSPDMVAHQGVMSLLDGDTRSVPGWQNRVFANIVRPIIPQRVEIMLVQLAFSPLSLPSIKSLWQ 742 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig972.17722.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig972.17722.1 >prot_E_fasciculatus_S2_contig972.17722.1 ID=prot_E_fasciculatus_S2_contig972.17722.1|Name=mRNA_E_fasciculatus_S2_contig972.17722.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=691bp MLRASWAGERLSGRARRLDHALEHEPEREREREDATVVAGPLWRRRSRRVback to top mRNA from alignment at E_fasciculatus_S2_contig972:2793..15518+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig972.17722.1 ID=mRNA_E_fasciculatus_S2_contig972.17722.1|Name=mRNA_E_fasciculatus_S2_contig972.17722.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=12726bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig972:2793..15518+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig972:2793..15518+ >mRNA_E_fasciculatus_S2_contig972.17722.1 ID=mRNA_E_fasciculatus_S2_contig972.17722.1|Name=mRNA_E_fasciculatus_S2_contig972.17722.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2073bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig972:2793..15518+ (Ectocarpus fasciculatus EfasUO2)back to top |