mRNA_E_fasciculatus_S2_contig9606.17622.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9606.17622.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN2_ECTSI) HSP 1 Score: 331 bits (849), Expect = 7.060e-114 Identity = 162/196 (82.65%), Postives = 175/196 (89.29%), Query Frame = 1
Query: 1 MEPIRQSYVLAWNQSDLVDEGGDMFITLSARGIEGQGMIAIGFGGLTMETTDDFVICVVDSETSAECTDRSGPGGRSEPPLDEEENTDLDVVSVSVDGEWTSVTFARSGEGTDDLDYPLSDDIYLSQDTSIIYSWRSGEGIGKHPNSQRGAAQVNFQDGSVADEQCSDSGEYYSLHGALLLVAWMIIAPYGIYQAR 588
+EPI QSY+LAWNQSDLVDEGGDMFITLSARGIE QGMI IGFGGL+METTDDFVI VV+SETSAECTD SGPGGRS+P N +L+VV +SVDG+WT VTFA SGEGTDD DYPLSDDIY SQDTSIIY+WRSG+GIGKHPNSQRGAAQ+N +DGSVADEQCSDS EYYSLHGALLLVAWM IAPY IYQAR
Sbjct: 4 VEPIHQSYMLAWNQSDLVDEGGDMFITLSARGIEAQGMITIGFGGLSMETTDDFVIYVVESETSAECTDHSGPGGRSKPXXXXXXNNELEVVRMSVDGQWTGVTFALSGEGTDDSDYPLSDDIYPSQDTSIIYAWRSGDGIGKHPNSQRGAAQINLKDGSVADEQCSDSSEYYSLHGALLLVAWMRIAPYEIYQAR 199
BLAST of mRNA_E_fasciculatus_S2_contig9606.17622.1 vs.
Match: Peroxinectin (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB73_ECTSI) HSP 1 Score: 348 bits (894), Expect = 2.860e-113 Identity = 175/203 (86.21%), Postives = 183/203 (90.15%), Query Frame = 1
Query: 10 IRQSYVLAWNQSDLVDEGGDMFITLSARGIEGQGMIAIGFGGLTMETTDDFVICVVDSETSAECTDRSGPGGRSEPPLDEEENTDLDVVSVSVDGEWTSVTFARSGEGTDDL----------DYPLSDDIYLSQDTSIIYSWRSGEGIGKHPNSQRGAAQVNFQDGSVADEQCSDSGEYYSLHGALLLVAWMIIAPYGIYQAR 588
+ + Y LAWNQSDLV+EGGDMFITLSARGIEGQGMIAIGFGGL+MET DDFVICVV+SETSAECTDRS P RSEPPLD+EENTDLDVV+VSVDGEWTSVTFARSGEGTDD DY LSDDIYLSQDTSIIYSWRSG+GIGKHPNSQRGAAQVNFQDGSVADEQCSDS EYYSLHGALLLVAWMIIAPYGIYQAR
Sbjct: 561 LAEGYKLAWNQSDLVEEGGDMFITLSARGIEGQGMIAIGFGGLSMETADDFVICVVESETSAECTDRSAPRERSEPPLDDEENTDLDVVTVSVDGEWTSVTFARSGEGTDDSVRDGRGKAKEDYLLSDDIYLSQDTSIIYSWRSGDGIGKHPNSQRGAAQVNFQDGSVADEQCSDSAEYYSLHGALLLVAWMIIAPYGIYQAR 763
BLAST of mRNA_E_fasciculatus_S2_contig9606.17622.1 vs.
Match: Dopamine (beta-monooxygenase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX04_ECTSI) HSP 1 Score: 188 bits (477), Expect = 1.160e-51 Identity = 95/193 (49.22%), Postives = 127/193 (65.80%), Query Frame = 1
Query: 10 IRQSYVLAWNQSDLVDEGGDMFITLSARGIEGQGMIAIGFGGLTMETTDDFVICVVDSETSAECTDRSGPGGRSEPPLDEEENTDLDVVSVSVDGEWTSVTFARSGEGTDDLDYPLSDDIYLSQDTSIIYSWRSGEGIGKHPNSQRGAAQVNFQDGSVADEQCSDSGEYYSLHGALLLVAWMIIAPYGIYQAR 588
+ SY +AW E M ++LSA+GI GM+ IG+GGLTM D+VIC V S T AEC DR GGRS P D+E++ L+V+SV V+G+WT+V F RS DD DY LS D+ +DT +IYS+R G G+G+HPN+ RGA+ VNF G V +E D + S+HGAL+L+AWM++AP+GIY R
Sbjct: 66 LSDSYSVAWEMV----EDNTMTMSLSAKGIGDTGMLGIGWGGLTMSDAQDYVICEVLSSTEAECIDRQATGGRSLPDPDDEDDPYLEVLSVEVEGDWTTVQFLRSFATLDDQDYDLSQDLDNEEDTEVIYSFREGAGVGQHPNANRGASTVNFATGDVENE--CDENNFVSIHGALMLIAWMVLAPWGIYYVR 252
BLAST of mRNA_E_fasciculatus_S2_contig9606.17622.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE) HSP 1 Score: 188 bits (477), Expect = 1.220e-51 Identity = 100/196 (51.02%), Postives = 129/196 (65.82%), Query Frame = 1
Query: 10 IRQSYVLAWNQSDLVDEGGDMFITLSARGIEGQGMIAIGFGGLTMETTDDFVICVVDSETSAECTDRSGPGGRSEPPLDEEENTDLDVVSVSVDGEWTSVTFARSGEGTDDLDYPLS---DDIYLSQDTSIIYSWRSGEGIGKHPNSQRGAAQVNFQDGSVADEQCSDSGEYYSLHGALLLVAWMIIAPYGIYQAR 588
+ SY +AW V E M ++LSA+GI GM+ IG+GGLTM DFVIC V S T AEC DR GGRS P D+E++ L+V+SV V+GEWT+V F RS DD DY LS +D+ +DT +IYS+R G G+G+HPN+ RGA+ VNF G V +E D + S+HGAL+LVAWMI+AP+GIY R
Sbjct: 700 LSDSYSIAWE----VLEDNTMTMSLSAKGIGDTGMLGIGWGGLTMSDAQDFVICEVLSSTEAECIDRQATGGRSVPEPDDEDDPYLEVLSVEVEGEWTTVQFLRSFTTLDDQDYDLSQAIEDLDNEEDTEVIYSFREGAGVGQHPNANRGASTVNFATGDVENE--CDENNFVSIHGALMLVAWMILAPWGIYYVR 889
BLAST of mRNA_E_fasciculatus_S2_contig9606.17622.1 vs.
Match: Peroxidase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI) HSP 1 Score: 176 bits (446), Expect = 1.750e-47 Identity = 95/193 (49.22%), Postives = 121/193 (62.69%), Query Frame = 1
Query: 10 IRQSYVLAWNQSDLVDEGGDMFITLSARGIEGQGMIAIGFGGLTMETTDDFVICVVDSETSAECTDRSGPGGRSEPPLDEEENTDLDVVSVSVDGEWTSVTFARSGEGTDDLDYPLSDDIYLSQDTSIIYSWRSGEGIGKHPNSQRGAAQVNFQDGSVADEQCSDSGEYYSLHGALLLVAWMIIAPYGIYQAR 588
+ + Y ++W D + I+LS GI GMI IGFGGL+M DF+IC V S AECTDRS GGRSEP D + L+V +V+ G WT+V F+R D DY L +DI DT +IYS++ GEG+G+HPN+ RGAA +NF G V D QC + SLHGAL+L+AWMIIAP+GIY AR
Sbjct: 493 LAERYGISWEVEDET-----LLISLSVLGIGDSGMIGIGFGGLSMTDAQDFIICEVFSTGGAECTDRSPTGGRSEPQPDTFQ-LGLEVTNVTTGGGWTTVKFSRERATLDAEDYDLFEDIENEADTLVIYSFKKGEGVGQHPNTNRGAATINFVTGDV-DTQCDGETSFVSLHGALMLIAWMIIAPWGIYYAR 678
BLAST of mRNA_E_fasciculatus_S2_contig9606.17622.1 vs.
Match: Peroxidase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE6_ECTSI) HSP 1 Score: 174 bits (442), Expect = 6.070e-47 Identity = 95/194 (48.97%), Postives = 123/194 (63.40%), Query Frame = 1
Query: 10 IRQSYVLAWNQSDLVDEGGDMF-ITLSARGIEGQGMIAIGFGGLTMETTDDFVICVVDSETSAECTDRSGPGGRSEPPLDEEENTDLDVVSVSVDGEWTSVTFARSGEGTDDLDYPLSDDIYLSQDTSIIYSWRSGEGIGKHPNSQRGAAQVNFQDGSVADEQCSDSGEYYSLHGALLLVAWMIIAPYGIYQAR 588
+ SY +AW V E ++ +LSAR I +GM+ +GFGGLTM DFVIC + S AEC DR GGRS PP D+E+ L+V SV VDGEWT+VTF + DD DY L+ DI ++T +IYS+ GE +G+HP S RGA+ +NF G V E D + SLHGAL+L+AWMI+AP+GIY R
Sbjct: 585 LSDSYKMAWE----VQEDEELISFSLSARDIGDRGMLGVGFGGLTMSDAQDFVICELTSTDEAECIDRQPTGGRSLPPRDDEDAV-LEVQSVEVDGEWTTVTFLKPTAALDDQDYDLAQDIKDEEETEVIYSF--GESLGQHPTSSRGASTINFATGDVEIE--CDENNFVSLHGALMLIAWMILAPWGIYYVR 769
BLAST of mRNA_E_fasciculatus_S2_contig9606.17622.1 vs.
Match: DOMON (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBZ5_9PHAE) HSP 1 Score: 167 bits (422), Expect = 8.030e-47 Identity = 85/193 (44.04%), Postives = 118/193 (61.14%), Query Frame = 1
Query: 10 IRQSYVLAWNQSDLVDEGGDMFITLSARGIEGQGMIAIGFGGLTMETTDDFVICVVDSETSAECTDRSGPGGRSEPPLDEEENTDLDVVSVSVDGEWTSVTFARSGEGTDDLDYPLSDDIYLSQDTSIIYSWRSGEGIGKHPNSQRGAAQVNFQDGSVADEQCSDSGEYYSLHGALLLVAWMIIAPYGIYQAR 588
+ ++ L W + E M IT + + G + +G+GGLTME D++IC + E++A CTDR+ R PPLD T L++ VS++ WTS+TF R DD DY L DI + DT +IY++R GEGIG+HPN RGAA VNF G+V + +C D ++ LHGAL+LVAWM++AP GIY R
Sbjct: 193 LSDNFELEWEEL----EDDQMAITFRCKDLGTSGWMGVGWGGLTMELAQDYIICEITDESTASCTDRAYTTEREAPPLDAAGETSLNITDVSMEDGWTSITFLRDRGAFDDEDYDLGSDIDDAVDTLVIYAYREGEGIGQHPNGNRGAATVNFATGNV-EAECDDD-DFVLLHGALMLVAWMVLAPLGIYYVR 379
BLAST of mRNA_E_fasciculatus_S2_contig9606.17622.1 vs.
Match: Peroxidase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI) HSP 1 Score: 174 bits (441), Expect = 8.210e-47 Identity = 92/193 (47.67%), Postives = 126/193 (65.28%), Query Frame = 1
Query: 10 IRQSYVLAWNQSDLVDEGGDMFITLSARGIEGQGMIAIGFGGLTMETTDDFVICVVDSETSAECTDRSGPGGRSEPPLDEEENTDLDVVSVSVDGEWTSVTFARSGEGTDDLDYPLSDDIYLSQDTSIIYSWRSGEGIGKHPNSQRGAAQVNFQDGSVADEQCSDSGEYYSLHGALLLVAWMIIAPYGIYQAR 588
+ + Y ++W +++D+ + I+LS GI GM+ IGFGGL+M DF+IC V S AEC DRS GGRSEP D ++ L V +V+ D WT+VTF+R D DY L +DI +DT +IY+++ GEG+G+HPN+ RGAA +NF G V D QC + SLHGAL+L+AWM+IAP+GIY AR
Sbjct: 493 LAERYAMSW---EVIDDQ-TISISLSVLGIGDSGMMGIGFGGLSMTDAQDFIICEVFSTGGAECIDRSPTGGRSEPQPDTLQSG-LQVTNVTTDKTWTTVTFSRERATLDAEDYDLFEDIENEEDTLVIYAFKKGEGVGQHPNTNRGAATINFVTGDV-DTQCDGETNFVSLHGALMLIAWMLIAPWGIYYAR 679
BLAST of mRNA_E_fasciculatus_S2_contig9606.17622.1 vs.
Match: Peroxidase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW8_ECTSI) HSP 1 Score: 166 bits (421), Expect = 3.920e-44 Identity = 86/193 (44.56%), Postives = 117/193 (60.62%), Query Frame = 1
Query: 10 IRQSYVLAWNQSDLVDEGGDMFITLSARGIEGQGMIAIGFGGLTMETTDDFVICVVDSETSAECTDRSGPGGRSEPPLDEEENTDLDVVSVSVDGEWTSVTFARSGEGTDDLDYPLSDDIYLSQDTSIIYSWRSGEGIGKHPNSQRGAAQVNFQDGSVADEQCSDSGEYYSLHGALLLVAWMIIAPYGIYQAR 588
+ ++ L W + E M IT + + G + +G+GGLTME DF+IC + E++A CTDR+ R PPLD T L+ +S++ WTSVTF R DD DY L DI + DT +IY++R GEGIG+HPN RGAA VNF G+V + +C D ++ LHGAL+LVAWM++AP GIY R
Sbjct: 460 LSDNFELEWEEL----EDDQMAITFRCKDLGTSGWMGVGWGGLTMELAQDFIICEITDESTASCTDRAYTTEREAPPLDSAGETSLNFTDLSMEDGWTSVTFLRDRGAFDDQDYDLGSDIDNAADTLMIYAYREGEGIGQHPNGNRGAATVNFATGNV-EAECDDD-DFVLLHGALMLVAWMVLAPVGIYYVR 646
BLAST of mRNA_E_fasciculatus_S2_contig9606.17622.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ31_9PHAE) HSP 1 Score: 163 bits (412), Expect = 6.300e-43 Identity = 88/193 (45.60%), Postives = 117/193 (60.62%), Query Frame = 1
Query: 10 IRQSYVLAWNQSDLVDEGGDMFITLSARGIEGQGMIAIGFGGLTMETTDDFVICVVDSETSAECTDRSGPGGRSEPPLDEEENTDLDVVSVSVDGEWTSVTFARSGEGTDDLDYPLSDDIYLSQDTSIIYSWRSGEGIGKHPNSQRGAAQVNFQDGSVADEQCSDSGEYYSLHGALLLVAWMIIAPYGIYQAR 588
+ + Y ++W D + I+LS I GMI +GFGG +M DFVIC V S AEC DR+ GGRSEP D ++L+ +V +G WT+VTF R D DY L +DI DT +IY+++ GEG+G+HPN+ RGAA +NF G V D C + SLHGAL+L+AWM+IAP+GIY AR
Sbjct: 478 LAERYAMSWEIDDQ-----SISISLSVLDIGDSGMIGVGFGGESMTDAQDFVICEVFSGGDAECIDRAPTGGRSEPQPDSL-GSELEGTTVISEGRWTTVTFFRERATLDAEDYDLFEDIENEVDTLVIYAFKKGEGVGQHPNTNRGAATINFVTGDV-DTHCDGETNFVSLHGALMLIAWMLIAPWGIYYAR 663 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9606.17622.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9606.17622.1 >prot_E_fasciculatus_S2_contig9606.17622.1 ID=prot_E_fasciculatus_S2_contig9606.17622.1|Name=mRNA_E_fasciculatus_S2_contig9606.17622.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=197bp MEPIRQSYVLAWNQSDLVDEGGDMFITLSARGIEGQGMIAIGFGGLTMETback to top mRNA from alignment at E_fasciculatus_S2_contig9606:674..3300+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9606.17622.1 ID=mRNA_E_fasciculatus_S2_contig9606.17622.1|Name=mRNA_E_fasciculatus_S2_contig9606.17622.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2627bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9606:674..3300+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9606:674..3300+ >mRNA_E_fasciculatus_S2_contig9606.17622.1 ID=mRNA_E_fasciculatus_S2_contig9606.17622.1|Name=mRNA_E_fasciculatus_S2_contig9606.17622.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=591bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9606:674..3300+ (Ectocarpus fasciculatus EfasUO2)back to top |