mRNA_E_fasciculatus_S2_contig9333.17392.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9333.17392.1
Unique NamemRNA_E_fasciculatus_S2_contig9333.17392.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Cation_ATPase_N (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B4_ECTSI)

HSP 1 Score: 378 bits (971), Expect = 1.700e-121
Identity = 196/237 (82.70%), Postives = 201/237 (84.81%), Query Frame = 1
Query:    1 VAVDEKGHPRLAEMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCRTRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNLNKFRKGDDPQRNPSLRNADKFEEIESDLTFVGICGIK 711
            VAVDEKGHPRLAEMSAAGVSYEPVGKV+GLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQS+DKSVAASQFCSFWAAKYDKLATLEF                       V G   +      +VMLPDGKSVPMTSQFRKEIIDKYA MAVRPLRCLALATKEGD LG LNKFRKGDDPQRNPSLRNADKFEE+ESDLTFVGICGIK
Sbjct:  381 VAVDEKGHPRLAEMSAAGVSYEPVGKVEGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSSDKSVAASQFCSFWAAKYDKLATLEFKE---------------------VDGTTNLRTTFLEQVMLPDGKSVPMTSQFRKEIIDKYAAMAVRPLRCLALATKEGDTLGILNKFRKGDDPQRNPSLRNADKFEEVESDLTFVGICGIK 596          
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6Q7_9STRA)

HSP 1 Score: 243 bits (620), Expect = 4.060e-71
Identity = 128/231 (55.41%), Postives = 159/231 (68.83%), Query Frame = 1
Query:   25 PRLAEMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCRTRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNLNKFRKGD--DPQRNPSLRNADKFEEIESDLTFVGICGIK 711
            P L E    GVSY P G+V GL    M    M+D A VCA+CN+AQ+VF  E+  Y  +GEPTEAAL VLVEK+GVPG+ +S + S    Q   +WA+ Y KLATLEF+R+RKSMSVLC+       NRLFVKGAPEML+KRCTKVMLP GK V +T +FR++++ + + +A RPLRCLALA KEGD LG L  F   D  +   +P L +   F+ IESDLTFVG+CGIK
Sbjct:  307 PSLKEYEVEGVSYVPEGQVVGLGAQGMNTKNMQDAARVCALCNEAQVVF--EDDLYRHLGEPTEAALKVLVEKMGVPGLTKSEEPSEKCRQCNEYWASSYRKLATLEFSRDRKSMSVLCKDSNGS--NRLFVKGAPEMLLKRCTKVMLPSGKVVKLTPEFREKVMGQVSDLARRPLRCLALALKEGDDLGQLKSFSPTDSNEASNHPLLNDVKNFQSIESDLTFVGLCGIK 533          
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Cation_ATPase_N (domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D109_9STRA)

HSP 1 Score: 233 bits (594), Expect = 7.170e-67
Identity = 125/237 (52.74%), Postives = 163/237 (68.78%), Query Frame = 1
Query:   16 KGHPRLAEMSAAGVSYEPVGKVDGLADDAMEHG-----GMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCRTRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNLNKFRKGDDPQRNPSLRNADKFEEIESDLTFVGICGIK 711
            +G   ++E +  GVSY P G V+GL       G     G+ D+AT+ A+CN+A+IVF  ++G + RIGEPTEAAL VLVEKL +PG  ++ D  VA SQ+  +W  KY KLATLEF+R+RKSMSVLCR   +   N+LFVKGAP++LV RCT++ L  GK+VP+T++ R  I+ K  +MAVRPLRCL LA KEG  LG LNK    ++   +P LRN  +F +IES LT VGICGIK
Sbjct:  490 EGGAVMSEFAVEGVSYNPSGAVEGLMPSGPGAGNALPKGIEDIATIAALCNEAKIVF--QDGKFERIGEPTEAALKVLVEKLHIPGEPRNEDPFVACSQYSKYWEGKYAKLATLEFSRDRKSMSVLCRP-WNGGGNKLFVKGAPDLLVARCTRLRLASGKTVPLTNEMRHRIMAKVESMAVRPLRCLGLAMKEGGELGALNKVSTEEEAASSPLLRNPAQFGQIESGLTLVGICGIK 723          
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Cation_ATPase_N (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQB3_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.640e-64
Identity = 124/225 (55.11%), Postives = 148/225 (65.78%), Query Frame = 1
Query:   37 EMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCRTRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNLNKFRKGDDPQRNPSLRNADKFEEIESDLTFVGICGIK 711
            E + +G SYEP+G V GL + AM H G RDLA VC++CNDA+IVF  EEG + R+GEPTEAAL VLVEK                        ++Y KLATLEFNR+RKSMSVL +  G    NRL VKGAPEML+ RCTKV LP G+ VP+T ++R  +  K   MA RPLRCLALA KEG  LG L  F +GDDP  +P LR+   F +IESDLTFVG+ GIK
Sbjct:  475 ECAVSGTSYEPIGTVSGLEEGAMSHAGRRDLARVCSICNDARIVF--EEGKFTRVGEPTEAALCVLVEK------------------------SEYTKLATLEFNRDRKSMSVLVQPVGGG-ENRLLVKGAPEMLLARCTKVKLPSGEVVPLTDEYRTSLKQKILEMAERPLRCLALALKEGKDLGELANFTQGDDPAAHPLLRDFHNFVQIESDLTFVGLAGIK 672          
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P7M5_HETAK)

HSP 1 Score: 211 bits (536), Expect = 4.810e-59
Identity = 120/235 (51.06%), Postives = 153/235 (65.11%), Query Frame = 1
Query:   25 PRLAEMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQ---SADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCRTRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALG---NLNKFRKGDDPQRNPSLRNADKFEEIESDLTFVGICGIK 711
            P LAE +  GVSY P G+V  L   AM   G++DLA V A+CNDA + F   EG +   GEPTEAAL VLVEKLGV G+ +   + D ++A  Q    W A+Y K+ATLEF+R+RKSMSVL R  G    NRLFVKGAPEML+ RC++V LP G+ VP+ + +R++I++K   MA RPLRCLALA KE + LG   +L+    G D   +P L +   F  IE  LTFVG+ GIK
Sbjct:  447 PGLAEYAVEGVSYNPAGQVVDLKPGAMAQEGLKDLARVMALCNDANVDF-VGEGGFQHRGEPTEAALRVLVEKLGVDGLPRPDAAQDPALACKQANQHWEAEYKKMATLEFSRDRKSMSVLVR--GADGANRLFVKGAPEMLLDRCSRVRLPSGEVVPLNASYRRQILEKNTEMATRPLRCLALAVKEAEDLGALADLDLEAGGADAAAHPLLNDPKHFAGIEQGLTFVGLAGIK 678          
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Hypothetical (protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BBV2_CHRCT)

HSP 1 Score: 204 bits (518), Expect = 1.430e-56
Identity = 112/238 (47.06%), Postives = 147/238 (61.76%), Query Frame = 1
Query:   13 EKGHPRLAEMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCR-TRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNLNKFRKGDDPQ----RNPSLRNADKFEEIESDLTFVGICGIK 711
            EK    L E    G +Y PVGKV GL +  +   G    A  C +CNDA++ +  E+G YGR+GEPTEAAL  +VEK+G+PG     D + A + F +  AA + K+ATLEF+R RKSMSVLC  T G +  N LF KGAPE L+ RCT + L DG ++ M+ ++RK I ++++ MA RPLRCLALA KEG  L  L  +R  D P     RN  L    +F E+E  LTF+G+ GIK
Sbjct:  508 EKREQGLREYPVEGTTYRPVGKVQGLTEQVLGGKGAEQFAAACTMCNDAELTYSKEDGVYGRVGEPTEAALKAMVEKMGLPGTPPPPDAAAATNHFGALRAAAWSKVATLEFSRARKSMSVLCAPTNGGK--NTLFAKGAPEHLLPRCTHLRLADGTTLRMSDEWRKAITEQFSGMATRPLRCLALAVKEG-GLNKLADYRGSDAPHPRWVRN-LLATPSRFVEVEQGLTFLGLVGIK 741          
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZD7_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.730e-56
Identity = 109/229 (47.60%), Postives = 148/229 (64.63%), Query Frame = 1
Query:   31 LAEMSAAGVSYEPVGKVDGL-ADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCRTRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNLNKFRKGDDPQRNPS-LRNADKFEEIESDLTFVGICGIK 711
            L E    GVSY+P G V+G+   +  +  G+ DLA   ++CNDA++V   ++G + R+GEPTEAAL VL EKLG PG+ +      A     +FW+++Y+KLATLEFNR+RKSMSVL R     P NRLFVKGAPEML++RC  V LP G+++ MT + +  I +K+  MA RPLRCLA A KEG  +G L ++   +     P  L++  KF  +ESDL F G+ GIK
Sbjct:  272 LTEHPVPGVSYDPRGSVEGVDLAELTKQKGLLDLAACASLCNDARLVL-RDDGGFDRVGEPTEAALKVLAEKLGAPGVEKPDSPEKACDNANAFWSSRYEKLATLEFNRDRKSMSVLVRPTDGGP-NRLFVKGAPEMLLERCKYVRLPGGRTMLMTPEIKASITEKFQEMARRPLRCLATAVKEGVNMGKLGRWEGSESEADVPDMLKDPTKFANVESDLVFTGLIGIK 498          
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Hypothetical (protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2BTR3_9EUKA)

HSP 1 Score: 191 bits (485), Expect = 2.620e-53
Identity = 112/236 (47.46%), Postives = 150/236 (63.56%), Query Frame = 1
Query:   13 EKG-HPRLAEMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCRTRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNL-NKFRKGDDPQRNPSL-RNADKFEEIESDLTFVGICGIK 711
            EKG   R+ E    G SYEP GKV GL    +E  GM  LATVCA+CNDA+I +   EGA+ R+GEPTEAAL VLVEK+G+      A    +AS +    +A++ ++ATLEF+R RKSMSVLCR+     HN LF+KGAPE ++ RC  + + DG ++ MT ++R+++  ++  MA RPLRCLALA KE   LG L N    G  P R  +L  N +   ++E  +TFVG+ GIK
Sbjct:   19 EKGIDGRIREYEVEGTSYEPRGKVRGLLPRTVEGQGMTSLATVCALCNDAEISYT--EGAFTRVGEPTEAALKVLVEKIGLTNTPPPATVEQSASYYSDMRSAEWTRVATLEFSRRRKSMSVLCRS-SSTGHNSLFIKGAPESVLPRCAFLRMSDGTTIRMTDEWRQKLRAQFEEMARRPLRCLALAVKENQ-LGLLENVSEPGQLPPRAQALLSNPESLIDVEQGMTFVGLVGIK 250          
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Putative (serca-type calcium ATPase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K612_9EUKA)

HSP 1 Score: 186 bits (473), Expect = 1.570e-50
Identity = 111/230 (48.26%), Postives = 143/230 (62.17%), Query Frame = 1
Query:   28 RLAEMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCSFWAAKYDKLATLEFNRNRKSMSVLCRTRGDQPHNRLFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNLNKFRK-GDDPQRN-PSLRNADKFEEIESDLTFVGICGIK 711
            R+ E    GVSY P G V GL    +   G  DLA VC +CNDA+I +   +G + R+GEPTEAAL VLVEK+G+P          +AS + S  A+++ ++ATLEF+R RKSMSVLCR R     N LFVKGAPE L+ RC  V L DG +V MT ++R+++  ++  MA RPLRCL LA K+ D LG L +    G  P R  P L +A  F  +ES LTFVG+ GIK
Sbjct:  442 RVREYEVEGVSYSPAGAVLGLQPSTILGSGFADLAAVCTLCNDAEIGYT--DGQFTRVGEPTEAALKVLVEKIGLPNTPSPTTVEASASHYSSLRASEWTRVATLEFSRERKSMSVLCRHRRTNL-NSLFVKGAPEGLLPRCDFVRLVDGTTVRMTDEWRRKLQTQFDEMARRPLRCLVLAVKD-DELGELGEISAPGVMPARAAPLLADASGFANLESGLTFVGMVGIK 667          
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Match: Cation_ATPase_N (domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XUP0_DIALT)

HSP 1 Score: 182 bits (463), Expect = 3.410e-49
Identity = 117/251 (46.61%), Postives = 151/251 (60.16%), Query Frame = 1
Query:    7 VDEKGHPRLAEMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVCNDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQFCS-FWAAKYDKLATLEFNRNRKSMSVLCRTRGD--------QPHNR-----LFVKGAPEMLVKRCTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNLNKFR--KGDDPQRNPSLRNADKFEEIESDLTFVGICGIK 711
            V   G   LAE +  GVSY P G V GL+  A    G+  L+ VC++CN+AQIV++A    Y RIGEPTEAAL VLVEKLG+P +A++ DK+ AAS  C+  W   Y   A LEF+R+RKSM VL              QP  R     L VKGAPE +++RCT + L DG  VP+T   R  I+ K+  MA RPLR LA+A KE   LG+L+ +   KG     + +L +A +F +IES LTFVG+ GIK
Sbjct:  369 VHASGESDLAEYAVEGVSYRPEGAVVGLSGAAAAAKGVLALSKVCSLCNEAQIVYNATSDKYERIGEPTEAALKVLVEKLGLPTVARTQDKA-AASVVCNRAWGVAYKLEALLEFSRDRKSMGVLVSPSAAAGALPTAAQPPARAGGTQLLVKGAPESVLERCTLLRLVDGSDVPITPASRARILAKFNEMARRPLRVLAMACKE--ELGDLSDYTADKGAAHPMHKALADASRFAQIESGLTFVGLVGIK 616          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9333.17392.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Cation_ATPase_N1.700e-12182.70domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Hypothetical4.060e-7155.41protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Cation_ATPase_N7.170e-6752.74domain-containing protein n=3 Tax=Monodopsidaceae ... [more]
Cation_ATPase_N1.640e-6455.11domain-containing protein n=1 Tax=Tribonema minus ... [more]
Hypothetical4.810e-5951.06protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical1.430e-5647.06protein n=1 Tax=Chrysotila carterae TaxID=13221 Re... [more]
Hypothetical1.730e-5647.60protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Hypothetical2.620e-5347.46protein n=1 Tax=Haptolina brevifila TaxID=156173 R... [more]
Putative1.570e-5048.26serca-type calcium ATPase n=1 Tax=Chrysochromulina... [more]
Cation_ATPase_N3.410e-4946.61domain-containing protein n=1 Tax=Diacronema luthe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9333contigE_fasciculatus_S2_contig9333:857..5487 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score379.4
Seed ortholog evalue1.2e-102
Seed eggNOG ortholog2880.D7G2B4
Model size712
KEGG koko:K01537
KEGG TC3.A.3.2
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.calcium-transporting ATPase activity
EggNOG OGsCOG0474@1,KOG0202@2759
Ec32 ortholog descriptionP-type ATPase, cytoplasmic domain N
Ec32 orthologEc-16_001780.4
EC3.6.3.8
Cds size711
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9333.17392.1prot_E_fasciculatus_S2_contig9333.17392.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9333 857..5486 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842583.2873673-CDS-E_fasciculatus_S2_contig9333:856..9911696842583.2873673-CDS-E_fasciculatus_S2_contig9333:856..991Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9333 857..991 +
1696842583.3019962-CDS-E_fasciculatus_S2_contig9333:2038..21591696842583.3019962-CDS-E_fasciculatus_S2_contig9333:2038..2159Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9333 2039..2159 +
1696842583.3137949-CDS-E_fasciculatus_S2_contig9333:2837..29311696842583.3137949-CDS-E_fasciculatus_S2_contig9333:2837..2931Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9333 2838..2931 +
1696842583.3332589-CDS-E_fasciculatus_S2_contig9333:4077..41861696842583.3332589-CDS-E_fasciculatus_S2_contig9333:4077..4186Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9333 4078..4186 +
1696842583.345882-CDS-E_fasciculatus_S2_contig9333:4700..48171696842583.345882-CDS-E_fasciculatus_S2_contig9333:4700..4817Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9333 4701..4817 +
1696842583.359978-CDS-E_fasciculatus_S2_contig9333:5351..54861696842583.359978-CDS-E_fasciculatus_S2_contig9333:5351..5486Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9333 5352..5486 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9333.17392.1

>prot_E_fasciculatus_S2_contig9333.17392.1 ID=prot_E_fasciculatus_S2_contig9333.17392.1|Name=mRNA_E_fasciculatus_S2_contig9333.17392.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=237bp
VAVDEKGHPRLAEMSAAGVSYEPVGKVDGLADDAMEHGGMRDLATVCAVC
NDAQIVFDAEEGAYGRIGEPTEAALSVLVEKLGVPGIAQSADKSVAASQF
CSFWAAKYDKLATLEFNRNRKSMSVLCRTRGDQPHNRLFVKGAPEMLVKR
CTKVMLPDGKSVPMTSQFRKEIIDKYATMAVRPLRCLALATKEGDALGNL
NKFRKGDDPQRNPSLRNADKFEEIESDLTFVGICGIK
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mRNA from alignment at E_fasciculatus_S2_contig9333:857..5487+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9333.17392.1 ID=mRNA_E_fasciculatus_S2_contig9333.17392.1|Name=mRNA_E_fasciculatus_S2_contig9333.17392.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4631bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9333:857..5487+ (Ectocarpus fasciculatus EfasUO2)
GTGGCCGTCGACGAGAAGGGGCACCCGCGGCTGGCCGAGATGTCGGCGGC GGGGGTATCGTACGAGCCGGTGGGCAAGGTGGACGGTCTCGCGGACGACG CCATGGAGCACGGAGGGATGCGGGACCTGGCAACGGTGAGTTTAGTGTAT ATATAGATATGCAGTGGGGGTGTACTCAATGACAATCTTCTTTATTTTTT TACTTACAAAGAAATAGTTTCCTCGTAAACTGAAAATTGAAGTGTGAGCA ATAAAACCTGATAAAAAAAGTACATATACGTGTAGTCTAGTAACAAATAT TCCCAAACTGTTTATTTTACACTTTCAAACCCATAAAACATATGTTTAAA GACGGTATTAATCGTTTTATTCTTTATACCGGTACTCTGTACAAATATGT ACCCGGCGCTACGAGCGACGCTAATGTTTTTCAGAGGGACCGGCGCTGTT CAAGTACAGAATGACTATTATAGTTGATTCAATCTTGTGCCGAGCAATTT CAATTTCACCGGTGCTATTCAGGGCCACCGGCGCTGATCAACCGGCGTTG TTGACGCCCCCCTTGCAACGGTGAAGTAGATGTAGTAGATCCATCGATGC GAGACCTCGGAGCGGTGATATAAATTTAAGTAGATGCTCCATCCATGCGG GACCTCGTAACTGTACATGATGCTCCTCCATCGATGGATCGGGTGCTGTT GTTTGGCGGTTCGCGTGGTGTGCTTTGCAAGGCGGAGGTACGTACGGAGG GTGTGTTGTTTGTGGGGGTGCAATATTGATACTGCCTCTTGGAGTGTCGG AGGCTTCGGAGGAGGGCTTCAGAACACTTTGGTGTGCAGAGCAGAACACC CCAGACTTGCCAATGAAAATGCTTATGATCGAAGGCAATCAAAGAAACCA CCCTTCAGGGAGGATTGTACTTCGAAGCTTCGAAGGTATGTTGCATTAAT AGCCGATTCACCCGCCCTATAGCGGGCACCCGCCCTGTTCAACTGTTCAA CTACTTGATTTATTTTACACCTCCTGCCGAGATATTTCACCCGCCTTGTA CCGACCCGGACACCTCTTCGACGTTCGTAAATAAGCGTGTTTGTCACCTC GTTTCGTGTTGTTGTTGTTTTCTTTTGCTCTTTTCTTTTTTTGTTTTTTT TTTTTTTTTTTGTGGGGTTGGCGCGAGTGCAGGTGTGCGCGGTATGCAAC GACGCTCAGATCGTGTTTGACGCGGAAGAGGGCGCCTACGGCAGGATCGG GGAGCCCACGGAAGCCGCCCTGAGTGTCCTCGTTGAGAAGCTCGGAGTGC CTGGTGAGAGGAGGTGGTGGAGAGAGGGGTGGATTGAATGCCAGCTAGCT GCGTGTATAAGCGGCAAGAGTGTTTTGTGCGCCCGGGTTTGTGGTTTGTG TGTGGTGCATGCATACTGTTTTCTGTCTGTCTCTCTGGCTGCCTCTCTCT CTTGTGCGTGTCGAGAGACCACGCCCGCGAACTGATTGTTTTAGTACCAT TCATCATTCGTGCTCCATGTTGAGAAACGTGGTACACTACATGGATACAA TTGCAGCACCTTCCTTCCTCCCTTCCTTAGTGCCCGTGTGGACGAAAAGG AAAAATACCCCGAAAGGTTGTACACTTGCGCTCAGCTCGGAACGTCAAGT AGTAGATACCTTGAGGGGGCAAGCAACGAGAGTACTGTACATACCTTGGC ACATTCGCATCATGACGTCAAGAGCCCCCCTGTCGACCCCCGGTATATTG TTGCGCCGGCCTCGTTGGTCTCACTGCTGTCAAACGTCGTTTCTTATCTT ATCCTGGTTGTCATTTCTTTTTCGCGTCTCTTTGCTATCTATCTATCTCA CTTACATTTTTTTCTTTTTTCTCTCCCCTCTCCGGGTATTACTGTGTTTT TCCGGTTGTATTCACACCGTGTCGTGTCTGTTGTCGCCATTTTTTTTTGT GTCTGGTTAAATCCCTCCTCTTTGTGTCAAGGCATCGCTCAGAGCGCCGA CAAGTCCGTGGCCGCCAGCCAGTTCTGCTCGTTCTGGGCGGCCAAGTACG ACAAGCTCGCCACACTAGAGTTCAAGTGAGAAAACTGCCAACCCGGAGGT CACACCTCTTTTCAAGTATATATATAGAATCCATCGAGTTCTGTGAGCCA ACTGCCAACCCGGAGGTCACCTCTCTTTTCAAGTTTATATATAGGATCCG GCAGCAGGTGTGGGTGTAGCTCGGATACAGCAATGTAAGTGTTGTGGTGT TTTTTCTTCTCGGCCGGGTCTATGCCGGTGGAGTGCTTGCTCCCCGGTGC CCACGATACTGCTGTAGTGCCGGTGAAGTGAAATTATGAAATTATGGGGT CAAACGAATGGCATAGATATCTATAACCCGGGTGTTTTTATGCTCTGGGT GGGATGGGATGGGATGGGATGGGATGTGGTACTGGTGGCGGCACTGCGGA CCCCCCCTTCGCGTGGGGATTGAATGAATGGTGGTGCCAACGTGCCACTA ACATCCCCGCCTTCCCCCAACAACTGGTGTTGTTTGTCCACGGTTTACAT GGGTTGGGAGCATGATTTTTTAAACACACAGTACTACTTACGGCTTTTTT TAGAATGCACGCTACCCTACAATCAATGCTTGGAGAATACCCTACCCTTT TCTCTGTTTGCGCTGAAGAATGTCCCCTGAAGTGGTGAATAACCGTTCAC CAGCGCTTTTGTTGCGATGTAGAAGTAGCGAGGATTTGCCAAGCGTGGCC GACGTGGGTCGGCCGTGCTATAATAGTCTTTAAGAAAGGTGAATATGAGA ATGAGCCTCGGTGTCACCCTTTCATCCTCCGGCTGGTCACAGCAGGCGGA GGATATTTATATCTTCAGACCTTGAGAACTGTATTCGTAGGGCCTCGGAT TCCACTGGTTGTATGTGCGTCACTGCCACTAGGAAGATACCTGTGTCCAG GTTTCCACATGTTGGCTCATTTCTTTGAGCACGCTCATGTTGATGGCAGT TCGTGGTCTTGAACAAGGGGTGTTGAGATGCTACTGGTTCCACGTTTACA TCGCTGCCGAAACCATCATCAGGAGAGGGGCATCGGTCGATTGTACGCTG GCACACATACAAAGGTTCGTCTTTGTGCGCGGAGTGGCTCCACGCGGCGA CTCGAGGACTGACTTCCCTCCCTCCCTCCCTCCTTCCCTCGACACACCTG GTTGCGGTTTCCTGTGTGCAGCCGTAACCGCAAGTCGATGTCTGTCTTGT GCCGCACGCGGGGGGACCAGCCCCACAACAGGCTGTTCGTCAAGGGTGCA CCGGAGATGCTCGTCAAGCGCTGCACTAAGGTACCCACTTATCCACCCAC CCATCCGTCAACTAACGAAGTTGGCGACGCAGCGGCGCACACGGCCTGTT GGTGTCGAACTTTGGCAGGCCTGTACGCCGTTAGCGATCGCCTTGTCTAT TTGTTGTCGACTTTGGTTATTGTACTGAGAATAAATATTTAAGAGTTTTT TGTATTTTATTTTAATGCTTGGAGTTTTTGATTGTTTTTGGGGTTTTCGA ACGCCAGGTAGAGTGGGAGAAAGTTCTTGTAAATAAACTGCAAAAATCGC CTCCTGCACGGAGTACAGCCCAAATTTTTGGACGGTTGCTTTCAAATGCG GTGCAATTGTTTGAGTGCGCGGTGTGGAAGTGCTCCAGTGTGACGTGAGC GATGAATTACAAGCGCCTTTCGTTCTGTTTTACGCAATGAAAACCCGCCA CGCGCTCTTCCCCCCCCTTTTTTTTCACAACCGAGAAGAGAAAAAAGAGA AATTGATACCACAACGAACCTTCAAACAACCTTCCTTCGTACAGGTGATG TTGCCGGACGGAAAGTCGGTGCCCATGACGTCACAGTTCCGGAAGGAGAT CATCGACAAGTACGCCACCATGGCCGTCAGGCCCCTCCGGTGTTTGGCCC TCGCCACGAAGGTGACTGCAGCTGTTGTTGCTGCTGTTGCTGTTGCTGTT GCTGCTGCTGCTGCTTTGACCGGCATAAAATCTAGCCCTTGGGTAGTGAG CGGCAGTTGAGACAGTTGACATTGCCGGACATACGGTAGCCCCCACGTAC AGTACATGTGCGGTGTGTTGTATAAACGTTTTCCTGTTGTGCCGGCCACA AGGGTACGCAGGGGAGAGAGACTGGGAGTGCTTCGAGGTATATATTTCCA GGCAAGAGCGATGTGCTCGAAGCCATGTTTTTGGAGTAAGGGGCGGGGGA GCAACGGGGCACTTTTGAGTTGCATTTGGACGTGCTCTTGCTCGTCCCGC ACCCGCCTACGCAGACGTTTTATTTTCTGCGGCACTCTCGTGTTCTGCCC CCCTCTCCCTTTTCCCTCCCACTCCCCTTATCTCGCCCCTACTCCCCCCC TATATCCTCTGTTTCCGTCTTTGTCTCTGCCTTCTCTCTTCTCTCTCTCT CTCTATCTCACACATACTCTCTCTTTCACTCCCTCTGTCTCATAGGAAGG AGACGCGCTGGGGAACCTGAACAAGTTCCGCAAGGGGGACGACCCCCAAC GGAACCCTTCCCTCAGGAACGCCGACAAGTTCGAGGAGATCGAGAGCGAT CTCACCTTCGTCGGCATCTGCGGCATCAAGG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9333:857..5487+

>mRNA_E_fasciculatus_S2_contig9333.17392.1 ID=mRNA_E_fasciculatus_S2_contig9333.17392.1|Name=mRNA_E_fasciculatus_S2_contig9333.17392.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=711bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9333:857..5487+ (Ectocarpus fasciculatus EfasUO2)
GTGGCCGTCGACGAGAAGGGGCACCCGCGGCTGGCCGAGATGTCGGCGGC
GGGGGTATCGTACGAGCCGGTGGGCAAGGTGGACGGTCTCGCGGACGACG
CCATGGAGCACGGAGGGATGCGGGACCTGGCAACGGTGTGCGCGGTATGC
AACGACGCTCAGATCGTGTTTGACGCGGAAGAGGGCGCCTACGGCAGGAT
CGGGGAGCCCACGGAAGCCGCCCTGAGTGTCCTCGTTGAGAAGCTCGGAG
TGCCTGGCATCGCTCAGAGCGCCGACAAGTCCGTGGCCGCCAGCCAGTTC
TGCTCGTTCTGGGCGGCCAAGTACGACAAGCTCGCCACACTAGAGTTCAA
CCGTAACCGCAAGTCGATGTCTGTCTTGTGCCGCACGCGGGGGGACCAGC
CCCACAACAGGCTGTTCGTCAAGGGTGCACCGGAGATGCTCGTCAAGCGC
TGCACTAAGGTGATGTTGCCGGACGGAAAGTCGGTGCCCATGACGTCACA
GTTCCGGAAGGAGATCATCGACAAGTACGCCACCATGGCCGTCAGGCCCC
TCCGGTGTTTGGCCCTCGCCACGAAGGAAGGAGACGCGCTGGGGAACCTG
AACAAGTTCCGCAAGGGGGACGACCCCCAACGGAACCCTTCCCTCAGGAA
CGCCGACAAGTTCGAGGAGATCGAGAGCGATCTCACCTTCGTCGGCATCT
GCGGCATCAAG
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