mRNA_E_fasciculatus_S2_contig926.17313.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig926.17313.1 vs.
Match: C2H2 (and CCCH zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z1_ECTSI) HSP 1 Score: 315 bits (808), Expect = 9.110e-102 Identity = 150/166 (90.36%), Postives = 153/166 (92.17%), Query Frame = 2
Query: 245 MADADSRDTGGLYLGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSGGANAMDFHEHGHQYECMIQDCTATFSSLKRHEEHYETSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCLEVFESSGKRHKHLVEAHLYPESFDFGRPSYT 742
M DAD R TGGLYLGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMS GA+AMD HE HQ+ECM QDCTATFSSLKRHEEHYETSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGC EVFESSGKRH+HLVEAHLYPESFDF R T
Sbjct: 1 MVDADRRSTGGLYLGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSEGADAMDLHEDQHQFECMFQDCTATFSSLKRHEEHYETSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCPEVFESSGKRHEHLVEAHLYPESFDFSRREMT 166
BLAST of mRNA_E_fasciculatus_S2_contig926.17313.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFJ7_9STRA) HSP 1 Score: 157 bits (398), Expect = 3.640e-39 Identity = 102/280 (36.43%), Postives = 132/280 (47.14%), Query Frame = 2
Query: 278 LYLGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIM---SGGANAMDFHEHGHQYECMIQDCTATFSSLKRHEEHYETSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCLEVFESSGKRHKHLVEAHLYPESFDFGRPSYTRKKARPKRAKDRGRKGGNLDVEPARDRRKGKLSAREAKAGASNEAEVVAATQRVESSHPIPVPGPTDKRSWSNGQGQAAPRRPPLATXXXXXXXXXASPRMACRFWRTAGGCRRGNGCKFVH 1108
L+ P R D FF+ G+ RA CK++V + A + H + C I C ATF+S R EHY+TSHRH C TCGR+F T RLLDLHLSE HDS+F+AMAE+R MY CLVEGC + F+ + R H++ H YP +FDF RP + + RGR G D +A A S+ A + Q +RS +G G+ A RR C F+ TA GCR G C F+H
Sbjct: 40 LHTAPFKRRYQPDDPFFEAGDLARATACKMSVLHGLWDDEEDAQSAGGRAHTGGFACRIGGCNATFTSTARFNEHYDTSHRHTCATCGRAFITPRLLDLHLSELHDSYFKAMAEKRHMYECLVEGCGKKFKDNNGRRAHMIAVHHYPRAFDFHRPPGQKPTVKHHTGALRGRSGSAADQS-------------QAPADQSDAAAAIVVNQ--------------SERSKKHG-GKTAKRR------------------RRCHFFDTAAGCRNGAECPFLH 273
BLAST of mRNA_E_fasciculatus_S2_contig926.17313.1 vs.
Match: zinc (finger protein 511 n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854ABAA) HSP 1 Score: 127 bits (320), Expect = 1.290e-29 Identity = 60/148 (40.54%), Postives = 90/148 (60.81%), Query Frame = 2
Query: 308 SSDSEFFDEGNTNRALLCKLNVFAIMSGGANAMDFHEHGHQYECMIQDCTATFSSLKRHEEHYETSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCLEVFESSGKRHKHLVEAHLYPESFDFGRPSYTRKK 751
S D +FF++G+ +R L + + G ++ +++C C+ F +L+ +E HY T HR+ C TC RSFP+ RLLD+H+ E HDS F MAE+ M+ CLVEGC+E F++SG+R HL++ HLYP F F +P + K
Sbjct: 42 SRDHQFFEDGDVHRHLYLE-----DVLTGIGEVEERSKVSEFQCQTAGCSQVFDTLESYEHHYNTLHRNVCSTCKRSFPSARLLDIHILEWHDSLFEIMAEKTNMFQCLVEGCVEKFKTSGERKNHLIKTHLYPSDFRFDKPKKSNNK 184
BLAST of mRNA_E_fasciculatus_S2_contig926.17313.1 vs.
Match: Zinc (finger protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A7J6VV38_THATH) HSP 1 Score: 126 bits (317), Expect = 3.390e-29 Identity = 72/181 (39.78%), Postives = 99/181 (54.70%), Query Frame = 2
Query: 233 ALLDMADADSRDTGGLYLGPVLRPLSSDSEFFDEGNTNRALLCK---LNVFAIMSGGANAMDFHEHGHQYECMIQDCTATFSSLKRHEEHYETSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERR-PMYACLVEGCLEVFESSGKRHKHLVEAHLYPESFDFGRPSYTRKKARPK 763
A++ + + + G Y P+LR DS FF GN R LL K L++ MD+ +H + C I C A +SL+ E+HY H C C R +PT RLL +H+SEAHDSFF+A R PMY CLVEGC + S R +HLV+ H +P+SF+F + ++ KK R K
Sbjct: 2 AVVAEREGEKKLLGFPYWIPILRRFHPDSPFFASGNIERELLVKQVALDITEDEKSQLQYMDYEQHRDVF-CPIVGCGAKLNSLEGFEDHYHARHSASCSVCSRVYPTSRLLSIHISEAHDSFFQAKVARGIPMYECLVEGCSQKLMSYKSRQQHLVDKHKFPKSFEFFKKAHLSKKQRQK 181
BLAST of mRNA_E_fasciculatus_S2_contig926.17313.1 vs.
Match: Zinc (finger protein 511 n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5QBI0_9ANUR) HSP 1 Score: 124 bits (312), Expect = 1.970e-28 Identity = 64/167 (38.32%), Postives = 94/167 (56.29%), Query Frame = 2
Query: 257 DSRDTGGLYLGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSGGANAMDFHEHGHQYECMIQDCTATFSSLKRHEEHYETSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCLEVFESSGKRHKHLVEAHLYPESFDFGRPSYTRKKAR 757
D R PV + EFF++G+ +R L K + +I ++ ++ C C F +L+ +E HY T HR+ C C RSFP+ RLLD+H+ E HD+FF+ MAE+ MY CLVEGCL+ F++S +R HL++ HLYP F F +P + KA+
Sbjct: 29 DRRHDTERTFNPVRVRFPREHEFFEDGDVHRQLYLKGILQSIRE-----VEERTKVSEFRCQTTGCAQFFDTLESYEHHYNTLHRNVCSICKRSFPSARLLDIHILEWHDTFFQLMAEKENMYQCLVEGCLKKFKTSQERKDHLIKIHLYPSDFRFDKPKKNKGKAK 190
BLAST of mRNA_E_fasciculatus_S2_contig926.17313.1 vs.
Match: ZN511 (protein (Fragment) n=3 Tax=Pelecaniformes TaxID=9205 RepID=A0A7K8PVP2_COCCO) HSP 1 Score: 122 bits (305), Expect = 3.060e-28 Identity = 59/127 (46.46%), Postives = 80/127 (62.99%), Query Frame = 2
Query: 428 QYECMIQDCTATFSSLKRHEEHYETSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCLEVFESSGKRHKHLVEAHLYPESFDFGRPSYTRKKARPKRAKDRGRKGGNLDVE 808
++ C I C F +L+ +E HY T HR+ C C RSFP+ LLD+H+SE HDS F+ MAE++ MY CLVEGC E F+SSG R +HLV HLYP F F RP + K+ PK + G ++ ++
Sbjct: 4 EFSCHISGCCQVFDTLEGYEHHYNTLHRNVCSFCKRSFPSGHLLDIHISEWHDSLFQIMAEKQNMYKCLVEGCAEKFKSSGDRKEHLVTVHLYPADFRFDRPK--KAKSGPKHVSSPAKPGASVPMD 128
BLAST of mRNA_E_fasciculatus_S2_contig926.17313.1 vs.
Match: zinc (finger protein 511 n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI0019976E9F) HSP 1 Score: 124 bits (311), Expect = 4.410e-28 Identity = 63/166 (37.95%), Postives = 95/166 (57.23%), Query Frame = 2
Query: 236 LLDMADADSRDTGGLYLGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSGGANAMDFHEHGHQYECMIQDCTATFSSLKRHEEHYETSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCLEVFESSGKRHKHLVEAHLYPESFDFGRP 733
L +D +++ P L D EFF +G+ +R L + ++ + G A++ E ++C + C F +L+ +E HY + HRH C +C RSFP++RLLD+H+ E HDS F+ MAER MY CLVEGC F++S +R +HL+ H YP F F +P
Sbjct: 38 LFRRSDGPEKNSSPFTFTPQRFRLDKDDEFFADGDVHRHLYLQ-DLVTPHTEGPPALNISE----FQCHVAGCKQLFDTLETYEHHYNSLHRHVCSSCKRSFPSNRLLDIHILEWHDSLFQVMAERECMYQCLVEGCGLKFQTSKERKEHLITTHSYPADFRFDKP 198
BLAST of mRNA_E_fasciculatus_S2_contig926.17313.1 vs.
Match: zinc (finger protein 511 n=1 Tax=Bufo bufo TaxID=8384 RepID=UPI001ABE9BF4) HSP 1 Score: 121 bits (303), Expect = 6.220e-28 Identity = 59/138 (42.75%), Postives = 84/138 (60.87%), Query Frame = 2
Query: 320 EFFDEGNTNRALLCKLNVFAIMSGGANAMDFHEHGHQYECMIQDCTATFSSLKRHEEHYETSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCLEVFESSGKRHKHLVEAHLYPESFDFGRP 733
EFF+ G+ +R L + +VF ++ E + C + DC F +LK +E HY T HR+ C C SFP+ RLLD+H+ E HDS F+ MAE M+ CLVEGC+E F++ G+R HL+++HLYP F F +P
Sbjct: 47 EFFEGGDVHRHLYLQ-DVFTSIAEVEAKSSISE----FPCEVADCDQLFDTLKSYEHHYNTLHRNVCSICKISFPSVRLLDIHIFEGHDSLFQIMAENTNMFQCLVEGCMEKFKTIGERRNHLIKSHLYPSDFQFDKP 179
BLAST of mRNA_E_fasciculatus_S2_contig926.17313.1 vs.
Match: zinc (finger protein 511 isoform X1 n=2 Tax=Bufo gargarizans TaxID=30331 RepID=UPI001CF2687F) HSP 1 Score: 121 bits (303), Expect = 6.750e-28 Identity = 59/144 (40.97%), Postives = 87/144 (60.42%), Query Frame = 2
Query: 320 EFFDEGNTNRALLCKLNVFAIMSGGANAMDFHEHGHQYECMIQDCTATFSSLKRHEEHYETSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCLEVFESSGKRHKHLVEAHLYPESFDFGRPSYTRKK 751
EFF++G+ +R L + +VF ++ E + C DC F +LK +E HY T HR+ C C SFP+ RLLD+H+ E HDS F+ MAE M+ CLVEGC+E F++ G+R HL+++HLYP F F +P +++
Sbjct: 44 EFFEDGDVHRHLYLQ-DVFTSIAEVEAKSSISE----FPCEEADCDQLFDTLKSYEHHYNTLHRNVCSVCKISFPSVRLLDIHIFEGHDSLFQIMAENTNMFQCLVEGCMEKFKTIGERRNHLIKSHLYPSDFQFDKPERNKRR 182
BLAST of mRNA_E_fasciculatus_S2_contig926.17313.1 vs.
Match: Uncharacterized (protein n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6MB23_LACSA) HSP 1 Score: 122 bits (307), Expect = 7.200e-28 Identity = 67/164 (40.85%), Postives = 89/164 (54.27%), Query Frame = 2
Query: 281 YLGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSGGANAM-DFHEHGHQYECMIQDCTATFSSLKRHEEHYETSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERR-PMYACLVEGCLEVFESSGKRHKHLVEAHLYPESFDFGRPSYTRKKARPKR 766
Y PVLR D FF GN R LL K + + +F + + C I C AT +L E+HY H C C R +PT RLL +H+SEAHDSFF+A A R PMY CLVEGC +S RH+HL++ H +P +++F + S+ KK R K+
Sbjct: 19 YWFPVLRRFGPDDPFFASGNIERELLAKQITLDLTEEEKQEIRNFEDKYREVLCPIVGCGATLKTLTEFEDHYNARHTSSCSVCSRVYPTSRLLSIHVSEAHDSFFQAKAARGYPMYECLVEGCGVKLKSYKSRHQHLMDKHKFPSTYEFLKKSHPSKKERVKK 182 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig926.17313.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig926.17313.1 >prot_E_fasciculatus_S2_contig926.17313.1 ID=prot_E_fasciculatus_S2_contig926.17313.1|Name=mRNA_E_fasciculatus_S2_contig926.17313.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=406bp MADADSRDTGGLYLGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSGGback to top mRNA from alignment at E_fasciculatus_S2_contig926:889..3677+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig926.17313.1 ID=mRNA_E_fasciculatus_S2_contig926.17313.1|Name=mRNA_E_fasciculatus_S2_contig926.17313.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2789bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig926:889..3677+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig926:889..3677+ >mRNA_E_fasciculatus_S2_contig926.17313.1 ID=mRNA_E_fasciculatus_S2_contig926.17313.1|Name=mRNA_E_fasciculatus_S2_contig926.17313.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1218bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig926:889..3677+ (Ectocarpus fasciculatus EfasUO2)back to top |