mRNA_E_fasciculatus_S2_contig9251.17310.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9251.17310.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXT5_9PHAE) HSP 1 Score: 427 bits (1098), Expect = 5.320e-138 Identity = 311/580 (53.62%), Postives = 329/580 (56.72%), Query Frame = 1
Query: 511 ARGGSGVSTSSAPRSHAGSHDLAAWEEGGEARGAPA--AAAAAALDALGGAAPXXXXXXXXXXXXXXXXSEPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----AIKPNADPAATAPDENRVAGCCHQGXXXXXXEVE---GKEEAVGEEAETRPPPLPAPLLTKRSWEHDDVGDLFDSVDGNNGVAKPGLLVAAEGTGDV---------AGEERHLGETNGVGSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSEEKGTPTSVPKSSLGMPWGSVVFRSNTTESPGGNSMNSTAGVLGLGTSSELRDAEIGSVAVTDXXXXXXXXXXXXXXEEEGVRGWEEAGVGAAAAAGRGAASTGVDSPTEVDDDLTSKAATGEEEEPLQPLPEGAPTGGGGGSVDGDDSGVAVPLPKGADGGVVVEEGGED-GAAETVEA--AETADVAEEEVRLTAAFHAHLTPALIELWESTEDGTARRQAVQEVCLALERLDGCSDGQLTLDFVGAIGKTWSSAQASPDAPTTPTAE 2187
A GGSGVSTSSAPRSHAGSHDLAAWEE G ARGAPA AAAAA ++AL GAAP SEPGR A KP A+P ATA D + AG +G E+E GKE A GEEA TRP PLPAPL+TKRSWE DDVGDLF+S G NG + L+VAAEGTG V A E R+L E NG G+ A EK TPTSVPKSSLGMPWGSVVFRSNT+ESPG NSMNSTAGVLGLGTS ELRDA GSVAV D EEEG+RGWEEAGVGAAAA GR AA +DS TE DDD SKA TG EPLQ LPEGAPT PLPKGADG V G ETVEA AETADV E+EVRLTAAFHAHLTPAL ELWESTEDG+ARRQAVQEVCLALERLDGCSDGQLTLDFVGAIGK+WSSAQASPDAPT PTAE
Sbjct: 22 AHGGSGVSTSSAPRSHAGSHDLAAWEEAGGARGAPAPAAAAAAVVEALKGAAPVGEAVDESGGGKSGATSEPGRGPSSGRNLGHSNGERPSSGGRGDGARKGSPAAATEPRSSESASRPGPPADGGDNASKPGAEPDATAADGDGAAGG-RRGQGGGGDEIEAKEGKEGAAGEEAGTRPLPLPAPLVTKRSWEDDDVGDLFES--GGNG-SDDALVVAAEGTGGVGQAAAAAGEAREARNLCE-NGEGNKAGLVGGSQAASPSGVRPARGEEGGVRSAGGHSSLPPTPPLGRTLELDGR-----------SEKDTPTSVPKSSLGMPWGSVVFRSNTSESPGANSMNSTAGVLGLGTSGELRDAGDGSVAVADDFGGGGPEAR----EEEGIRGWEEAGVGAAAA-GR-AALARIDSITEADDDSASKAXTGXXXEPLQALPEGAPTXXXXXXXXXXXXXXVTPLPKGADGDVXXXXXXXXXGTTETVEASAAETADVTEDEVRLTAAFHAHLTPALCELWESTEDGSARRQAVQEVCLALERLDGCSDGQLTLDFVGAIGKSWSSAQASPDAPTPPTAE 579
BLAST of mRNA_E_fasciculatus_S2_contig9251.17310.1 vs.
Match: Serine/threonine (protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIZ0_ECTSI) HSP 1 Score: 374 bits (961), Expect = 5.680e-112 Identity = 377/754 (50.00%), Postives = 395/754 (52.39%), Query Frame = 1
Query: 1 SRGKMAKVGNMLGINDAAAAATLQKEMTVLARKQSEEIIRRQKLGGLGSWKTLTKSA-ATESQELSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSSGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGSGVSTSSAPRSHAGSHDLAAWEEGGEARGAPAAAAA-AALDALGGAAPXXXXXXXXXXXXXXXXSEPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----AIKPNADPAATAPDENRVAGCCHQGXXXXXXEVEG---KEEAVGEEAETRPPPLPAPLLTKRSWEHDDVGDLFDSVDGNNGVAKPGLLVAAEGTGDV-----------AGEERHLGETNGVGSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSEEKGTPTSVPKSSLGMPWGSVVFRSNTTESPGGNSMNSTAGVLGLGTSSELRDAEIGSVAVTDXXXXXXXXXXXXXXEEEGVRGWEEAGVGAAAAAGRGAASTGVDSPTEVDDDLTSKAATGEEEE-PLQPLPEGAPTGGGGGSVDGDDSGVAVPLPKGADGGVVVEEGGED--GAAETVEAA--ETADVAEEEVRLTAAFHAHLTPALIELWESTEDGTARRQAVQEVCLALERLDGCSDGQLTLDFVGAIGKTWSSAQASPDAPTTPTAE 2187
+RGKM KVG++LGINDAAAAATLQKEMTVL R Q EEIIRRQKLGGLGSWKT TKSA ATESQ+ XXX S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SGVSTSSAPRSHAGSHDLAAWEEGG ARGAPAAA AA++AL GAAP SEPGR A KP+A+P ATA D + A XXXXXX +EG KEEA GEEA TR PLPAPL+TKRSWEHDDVGDLF+SVDGN +LVAAEG G V AGE R N VGS X EK TPTSVPKSSLGMPWGSVVFRS+T+ESPG NSMNSTAGVLGLGTS ELRDAE GSVAVTD XX EEEGVRGWEEAGVGAAAA AA VDS PLQPLPEGAPTG GA E +EAA ETAD AE+EVRLTAAFHAHLTPAL C ALERLDGCSDGQLTLDFVGAIGK+WSSAQASPDAPTTPTAE
Sbjct: 422 NRGKMTKVGHVLGINDAAAAATLQKEMTVLTRMQDEEIIRRQKLGGLGSWKTSTKSAEATESQD-------PFPPXXXADPQGTLGQSWWWTPSFFSQEQHQPFSDSFSAKARGTRPFFSGWGSRTSSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVSTSSAPRSHAGSHDLAAWEEGGGARGAPAAATXXAAVEALEGAAPAGEAVDEPGGGKSGATSEPGRGPSSSRNLGHSNGERPSSGGRGDGTRKGSPAAATEPRSSESASRPGPPADGGDNANKPDAEPDATAADGDGAAXXXXXXXXXXXXXIEGEEGKEEAAGEEAGTRRLPLPAPLVTKRSWEHDDVGDLFESVDGNGNDGA--VLVAAEGAGGVDQAXXXXXXXXAGEAR-----NAVGSEXXAVGGSQAASPSGVRPESAEAGDTARGEEGGVRSAGGRSSLPPAPPLGRALELDGR---SEKDTPTSVPKSSLGMPWGSVVFRSSTSESPGANSMNSTAGVLGLGTSGELRDAEGGSVAVTDDYGGXXAEAQ----EEEGVRGWEEAGVGAAAAGC--AALARVDSAAXXXXXXXXXXXXXXXXXXPLQPLPEGAPTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATEALEAAAAETADAAEDEVRLTAAFHAHLTPAL--------------------CEALERLDGCSDGQLTLDFVGAIGKSWSSAQASPDAPTTPTAE 1132
BLAST of mRNA_E_fasciculatus_S2_contig9251.17310.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7V6_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 6.220e-5 Identity = 26/41 (63.41%), Postives = 31/41 (75.61%), Query Frame = 1
Query: 1960 LTAAFHAHLTPALIELWESTEDGTARRQAVQEVCLALERLD 2082
L+ AFH H T AL+ LWE TEDGT + AV+E+CLA ERLD
Sbjct: 853 LSGAFHLHFTEALLALWEGTEDGTEAQSAVEELCLAFERLD 893 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9251.17310.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9251.17310.1 >prot_E_fasciculatus_S2_contig9251.17310.1 ID=prot_E_fasciculatus_S2_contig9251.17310.1|Name=mRNA_E_fasciculatus_S2_contig9251.17310.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=726bp MAKVGNMLGINDAAAAATLQKEMTVLARKQSEEIIRRQKLGGLGSWKTLTback to top mRNA from alignment at E_fasciculatus_S2_contig9251:643..3685+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9251.17310.1 ID=mRNA_E_fasciculatus_S2_contig9251.17310.1|Name=mRNA_E_fasciculatus_S2_contig9251.17310.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3043bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9251:643..3685+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9251:643..3685+ >mRNA_E_fasciculatus_S2_contig9251.17310.1 ID=mRNA_E_fasciculatus_S2_contig9251.17310.1|Name=mRNA_E_fasciculatus_S2_contig9251.17310.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2178bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9251:643..3685+ (Ectocarpus fasciculatus EfasUO2)back to top |