mRNA_E_fasciculatus_S2_contig924.17298.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig924.17298.1
Unique NamemRNA_E_fasciculatus_S2_contig924.17298.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig924.17298.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQG7_ECTSI)

HSP 1 Score: 605 bits (1561), Expect = 3.540e-195
Identity = 359/414 (86.71%), Postives = 366/414 (88.41%), Query Frame = 1
Query:    1 QVDCGADEGAARHYFRQLLSGVRHCHDRGVCHRDLKPENLLLADPHDSSVLKIADFGFSALFRELETESSSGDXXXXXXXXXXXXXXXVGVTGAAGGAGGLALRRPRSGLHDLGSAVLREESGDGYDGTKADVWSMGVILYAMLAGNLPFEKELLACSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMDCLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDGRLYSGSGGSSSDGSDFSAGGAGGGAEDDWRAPDPQNIPSELLGADSDTEDEEEHNNTGSREWKESCDMGLLHPPGYTPAVSQPXXXXXXXXXXXXXXXXXXXXXXXX---SSVGRKGVGVSPTQEVTAKTKPPSTTAAVPVELRGIREEEESLAGSSPRVDGRGSARVGQGDPDAA 1233
            +VDCGADEGAARHYFRQLLSGVRHCHDRGVCHRDLKPENLLLADPHDSSVLKIADFGFSALFRELETESS   XXXXXXXXXXXXXXX       G A    LRRPRSGL  LG  VLREESGDGYDGTKADVWSMGVILYAMLAGNLPFEKELLACSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMDCLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDGRLYSGSGGSSSDGSDFSAGGAGGG E+DWRAPDPQNIPSELLGADSDTEDEEEH N GSREWKES D+GL H PGYTPA++ P   XXXXXXXXXXXXXXXXXXX     SSVGRKGVGV P +EV AKTK PSTT  V VELRGIREE E  AGSS R+ GRGSAR GQG PDAA
Sbjct:  294 KVDCGADEGAARHYFRQLLSGVRHCHDRGVCHRDLKPENLLLADPHDSSVLKIADFGFSALFRELETESSXXXXXXXXXXXXXXXXXXXXXXXXXGPA----LRRPRSGL-SLGGRVLREESGDGYDGTKADVWSMGVILYAMLAGNLPFEKELLACSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMDCLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDGRLYSGSGGSSSDGSDFSAGGAGGGVEEDWRAPDPQNIPSELLGADSDTEDEEEHANNGSREWKESSDIGL-HRPGYTPALALPPLPXXXXXXXXXXXXXXXXXXXEKQSTSSVGRKGVGVGPAKEVPAKTKRPSTTPEVSVELRGIREEGEGPAGSSTRLGGRGSAREGQGHPDAA 701          
BLAST of mRNA_E_fasciculatus_S2_contig924.17298.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K0_9PHAE)

HSP 1 Score: 592 bits (1527), Expect = 7.130e-190
Identity = 347/453 (76.60%), Postives = 355/453 (78.37%), Query Frame = 1
Query:    1 QVDCGADEGAARHYFRQLLSGVRHCHDRGVCHRDLKPENLLLADPHDSSVLKIADFGFSALFRELETESSSGDXXXXXXXXXXXXXXXVGVTGAAGGAGGLALRRPRSGLHDLGSA------------------------------------------VLREESGDGYDGTKADVWSMGVILYAMLAGNLPFEKELLACSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMDCLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDGRLYSGSGGSSSDGSDFSAGGAGGGAEDDWRAPDPQNIPSELLGADSDTEDEEEHNNTGSREWKESCDMGLLHPPGYTPAVSQPXXXXXXXXXXXXXXXXXXXXXXXXSSVGRKGVGVSPTQEVTAKTKPPSTTAAVPVELRGIREEEESLAGSSPRVDGRGSARVGQGDPDAA 1233
            +VDCGADEGAARHYFRQLLSGVRHCHDRGVCHRDLKPENLLLADPHDSSVLKIADFGFSALFRELETESS   XXXXXXXXXXXXXXX       G A    LRRPRSGL   G A                                          VLREESG GYDGTKADVWSMGVILYAMLAGNLPFEKELL CSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMDCLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDGRLYSGSGGSSSDGS+FSAGGAGGG E+DWRAPDPQNIPSELLGADSDTEDEEEH N GSREWKES DMGL H PGYTPAV+QP  XXXXXXXX              SSVGR+GVGV P ++V AKTKPPSTTA V VELRGIR E E  AGSS R+ GRGSAR GQG PDAA
Sbjct:  284 KVDCGADEGAARHYFRQLLSGVRHCHDRGVCHRDLKPENLLLADPHDSSVLKIADFGFSALFRELETESSXXXXXXXXXXXXXXXXXXXXXXXXXGPA----LRRPRSGLSLGGRARGTAGAGGGARXXXXXXXXXXKGRGVRRLTSVVGSPYYVAPEVLREESGHGYDGTKADVWSMGVILYAMLAGNLPFEKELLVCSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMDCLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDGRLYSGSGGSSSDGSEFSAGGAGGGVEEDWRAPDPQNIPSELLGADSDTEDEEEHTNNGSREWKESSDMGLRHRPGYTPAVAQPQPXXXXXXXXVVIVATPPEKQST-SSVGRRGVGVGPAKDVPAKTKPPSTTAGVSVELRGIRLEGEGPAGSSTRLGGRGSAREGQGHPDAA 731          
BLAST of mRNA_E_fasciculatus_S2_contig924.17298.1 vs.
Match: Protein (kinase domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A1G4_9STRA)

HSP 1 Score: 208 bits (529), Expect = 9.030e-55
Identity = 113/240 (47.08%), Postives = 143/240 (59.58%), Query Frame = 1
Query:    1 QVDCGADEGAARHYFRQLLSGVRHCHDRGVCHRDLKPENLLLADPHDSSVLKIADFGFSALFRELETESSSGDXXXXXXXXXXXXXXXVGVTGAAGGAGGLALRRPRSGL---HDLGSAVLREESGDGYDGTKADVWSMGVILYAMLAGNLPFEKELLACSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMDCLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLD 711
            ++DCG DE  AR YF+QL+SGV  CHD GVCHRDLKPENLLLAD  + S LKIADFG SA+F    TE ++GD                            A+RR RS +   H +   VL++ SG GYDG KAD WS+GVILYAMLAG LPF K+LL C RF +F  W+        +      +P   +    +D+P WFFP HFS+  ++LL+ L++PD   RLSV +A +H WVLD
Sbjct:   44 KLDCGTDEATARGYFKQLVSGVAFCHDSGVCHRDLKPENLLLADNEELSTLKIADFGLSAIFSI--TEYTNGDAAT-------------------------AIRRLRSVVGSPHYVAPEVLQDASGQGYDGAKADAWSIGVILYAMLAGKLPFGKDLLKCIRFDRFKKWSLQTKYDDDV-----EDPAQDVAATAVDFPEWFFPAHFSYDVKALLAQLMYPDPCLRLSVDEASKHRWVLD 251          
BLAST of mRNA_E_fasciculatus_S2_contig924.17298.1 vs.
Match: Protein (kinase domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZCA8_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.670e-53
Identity = 113/240 (47.08%), Postives = 143/240 (59.58%), Query Frame = 1
Query:    1 QVDCGADEGAARHYFRQLLSGVRHCHDRGVCHRDLKPENLLLADPHDSSVLKIADFGFSALFRELETESSSGDXXXXXXXXXXXXXXXVGVTGAAGGAGGLALRRPRSGL---HDLGSAVLREESGDGYDGTKADVWSMGVILYAMLAGNLPFEKELLACSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMDCLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLD 711
            ++DCG DE  AR YF+QL+SGV  CHD GVCHRDLKPENLLLAD  + S LKIADFG SA+F    TE ++GD                            A+RR RS +   H +   VL++ SG GYDG KAD WS+GVILYAMLAG LPF K+LL C RF +F  W+        +      +P   +    +D+P WFFP HFS+  ++LL+ L++PD   RLSV +A +H WVLD
Sbjct:  164 KLDCGTDEATARGYFKQLVSGVAFCHDSGVCHRDLKPENLLLADNEELSTLKIADFGLSAIFSI--TEYTNGDAAT-------------------------AIRRLRSVVGSPHYVAPEVLQDASGQGYDGAKADAWSIGVILYAMLAGKLPFGKDLLKCIRFDRFKKWSLQTKYDDDV-----EDPAHDVAATAVDFPEWFFPAHFSYDVKALLAQLMYPDPCLRLSVDEASKHRWVLD 371          
BLAST of mRNA_E_fasciculatus_S2_contig924.17298.1 vs.
Match: Aste57867_12474 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KX19_9STRA)

HSP 1 Score: 206 bits (525), Expect = 1.060e-52
Identity = 112/247 (45.34%), Postives = 146/247 (59.11%), Query Frame = 1
Query:    1 QVDCGADEGAARHYFRQLLSGVRHCHDRGVCHRDLKPENLLLADPHDSSVLKIADFGFSALFRELETESSSGDXXXXXXXXXXXXXXXVGVTGAAGGAGGLALRRPRSGL---HDLGSAVLREESGDGYDGTKADVWSMGVILYAMLAGNLPFEKELLACSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMD-----CLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDGR 717
            ++DCG DE  AR YF+QL+SGV  CH  GVCHRDLKPENLLLAD  ++S LKIADFG SA+F   +  + SG                             ++RR RS +   H +   VL +++G GYDG KAD WS+G+ILYAMLAGNLPF KELL C R+ KF  W+           +   N  D  D+D      +++P WFFP HFS+  +SL++ L++PD   RLSV +A++H WVL GR
Sbjct:  230 KLDCGTDEATARAYFKQLVSGVSFCHRSGVCHRDLKPENLLLADNEENSTLKIADFGLSAIFSITDDTTGSGH----------------------------SIRRLRSVVGSPHYVAPEVL-QDTGQGYDGAKADAWSIGIILYAMLAGNLPFGKELLKCLRYEKFKKWSY----------NTKYNDDDGCDVDPANDQAVEFPDWFFPPHFSYDVKSLIAQLIYPDPCLRLSVDEAIKHRWVLGGR 437          
BLAST of mRNA_E_fasciculatus_S2_contig924.17298.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHV0_PYTOL)

HSP 1 Score: 202 bits (514), Expect = 2.680e-51
Identity = 116/239 (48.54%), Postives = 142/239 (59.41%), Query Frame = 1
Query:    1 QVDCGADEGAARHYFRQLLSGVRHCHDRGVCHRDLKPENLLLADPHDSSVLKIADFGFSALFRELETESSSGDXXXXXXXXXXXXXXXVGVTGAAGGAGGLALRRPRSGL---HDLGSAVLREESGDGYDGTKADVWSMGVILYAMLAGNLPFEKELLACSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMDCLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVL 708
            ++DCG DE  AR YFRQL+SGV  CH  GVCHRDLKPENLLLAD  + S LKIADFG SA+F    TE++ G                 G T     A   A+RR RS +   H +   VL + +G GYDG KAD WS+GVI+YAMLAGNLPF K+LL C R+ KF  W              +    D   +D + +PSWFFP HFS   +SL++ LL+PD + RLSV +A RH WVL
Sbjct:  276 KLDCGTDENTARQYFRQLISGVAFCHLSGVCHRDLKPENLLLADNEELSTLKIADFGLSAIFAI--TENNGGQDVVGGGP---------GSTSVPTPASVQAIRRLRSVVGSPHYVAPEVLMD-AGQGYDGAKADAWSIGVIVYAMLAGNLPFGKDLLKCLRYEKFKKWCY------------NTKYSDEDPIDEIIFPSWFFPPHFSLEVKSLITQLLYPDPTMRLSVDEAQRHSWVL 490          
BLAST of mRNA_E_fasciculatus_S2_contig924.17298.1 vs.
Match: CAMK/CAMKL/MARK (protein kinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TV81_9STRA)

HSP 1 Score: 202 bits (514), Expect = 4.610e-51
Identity = 113/243 (46.50%), Postives = 144/243 (59.26%), Query Frame = 1
Query:    1 QVDCGADEGAARHYFRQLLSGVRHCHDRGVCHRDLKPENLLLADPHDSSVLKIADFGFSALFRELETESSSGDXXXXXXXXXXXXXXXVGVTGAAGGAGGLALRRPRSGL---HDLGSAVLREESGDGYDGTKADVWSMGVILYAMLAGNLPFEKELLACSRFAKFGAWARMPSATASLL-AHCSGNPKDAMD--MDCLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLD 711
            ++DCG DE  AR YF+QL+SGV  CH  GVCHRDLKPENLLLAD  + S LKIADFG SA+F    TE ++GD                            A+RR RS +   H +   VL++ SG GYDG KAD WS+GVILYAMLAG LPF K+LL C R+ +F  W++           H  G+ +D      D + +P WFFP  FS+  ++LL+ LL+PD   RLSV +A++H WVLD
Sbjct:  233 KLDCGTDEATARAYFKQLVSGVAFCHQSGVCHRDLKPENLLLADNEELSTLKIADFGLSAIFSI--TEHTNGDSTT-------------------------AIRRLRSVVGSPHYVAPEVLQDASGQGYDGAKADAWSIGVILYAMLAGKLPFGKDLLKCVRYDRFKKWSQATKYNDDDDDLHDDGDSEDPAQEHRDAVVFPDWFFPVQFSYDVKALLAQLLYPDPCLRLSVDEAMKHRWVLD 448          
BLAST of mRNA_E_fasciculatus_S2_contig924.17298.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKX5_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.270e-49
Identity = 111/248 (44.76%), Postives = 144/248 (58.06%), Query Frame = 1
Query:    1 QVDCGADEGAARHYFRQLLSGVRHCHDRGVCHRDLKPENLLLADPHDSSVLKIADFGFSALFRELETESSSGDXXXXXXXXXXXXXXXVGVTGAAGGAGGLALRRPRSGL---HDLGSAVLREESGDGYDGTKADVWSMGVILYAMLAGNLPFEKELLACSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMD--------CLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLD 711
            +++CG DE  AR YF+QL+SGV  CH  GVCHRDLKPENLLLAD  D+S LKIADFG SA+F    T+  SG                             A+RR RS +   H +   VL +++G GYDG KAD WS+G+ILYAMLAG+LPF KELL C R+ KF  W+           +   +  D  DMD         +++P WFFP HFS   + L++ L++PDA  RLSV +A++H WVL+
Sbjct:  228 KLECGTDEETARSYFKQLVSGVAFCHMSGVCHRDLKPENLLLADNEDNSTLKIADFGLSAIFSI--TDEGSGQ----------------------------AIRRLRSVVGSPHYVAPEVL-QDTGQGYDGAKADAWSIGIILYAMLAGSLPFGKELLKCLRYEKFKKWSYATK-------YIDEDEDDGDDMDDPANDQHRVVEFPDWFFPTHFSHDVKGLIAQLIYPDACLRLSVDEAMKHRWVLN 437          
BLAST of mRNA_E_fasciculatus_S2_contig924.17298.1 vs.
Match: Protein (kinase domain-containing protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VF73_9STRA)

HSP 1 Score: 202 bits (514), Expect = 2.580e-49
Identity = 113/243 (46.50%), Postives = 144/243 (59.26%), Query Frame = 1
Query:    1 QVDCGADEGAARHYFRQLLSGVRHCHDRGVCHRDLKPENLLLADPHDSSVLKIADFGFSALFRELETESSSGDXXXXXXXXXXXXXXXVGVTGAAGGAGGLALRRPRSGL---HDLGSAVLREESGDGYDGTKADVWSMGVILYAMLAGNLPFEKELLACSRFAKFGAWARMPSATASLL-AHCSGNPKDAMD--MDCLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLD 711
            ++DCG DE  AR YF+QL+SGV  CH  GVCHRDLKPENLLLAD  + S LKIADFG SA+F    TE ++GD                            A+RR RS +   H +   VL++ SG GYDG KAD WS+GVILYAMLAG LPF K+LL C R+ +F  W++           H  G+ +D      D + +P WFFP  FS+  ++LL+ LL+PD   RLSV +A++H WVLD
Sbjct:  131 KLDCGTDEATARAYFKQLVSGVAFCHQSGVCHRDLKPENLLLADNEELSTLKIADFGLSAIFSI--TEHTNGDSTT-------------------------AIRRLRSVVGSPHYVAPEVLQDASGQGYDGAKADAWSIGVILYAMLAGKLPFGKDLLKCVRYDRFKKWSQATKYNDDDDDLHDDGDSEDPAQEHRDAVVFPDWFFPVQFSYDVKALLAQLLYPDPCLRLSVDEAMKHRWVLD 346          
BLAST of mRNA_E_fasciculatus_S2_contig924.17298.1 vs.
Match: Protein (kinase domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A6G0RN94_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.290e-48
Identity = 113/245 (46.12%), Postives = 145/245 (59.18%), Query Frame = 1
Query:    1 QVDCGADEGAARHYFRQLLSGVRHCHDRGVCHRDLKPENLLLADPHDSSVLKIADFGFSALFRELETESSSGDXXXXXXXXXXXXXXXVGVTGAAGGAGGLALRRPRSGL---HDLGSAVLREESGDGYDGTKADVWSMGVILYAMLAGNLPFEKELLACSRFAKFGAWARMPSATASLLAHCSGNPKDAMD--MDCLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDGRL 720
            ++DCG DE +AR YFRQL+SGV  CH+ GVCHRDLKPENLLLAD  + S LKIADFG SA+F   E ++S G                        G    A+RR RS +   H +   VL + +G GYDG KAD WS+G+I+YAM+AGNLPF K+LL C R+ +F  W              S N K + D   D +++P+WFFP HFS   +SL++ LL+PDA  RLSV +A  H WV   +L
Sbjct:  384 KLDCGTDEESARLYFRQLISGVAFCHNSGVCHRDLKPENLLLADNEEHSTLKIADFGLSAIFAFTENDASGGAN--------------------GNGIDQPAIRRLRSVVGSPHYVAPEVLMD-AGQGYDGAKADAWSIGIIVYAMIAGNLPFGKDLLKCVRYDRFRKW--------------SYNTKYSDDDPTDEVEFPTWFFPAHFSLELKSLIAQLLYPDACMRLSVEEAQHHVWVRGEKL 593          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig924.17298.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Protein3.540e-19586.71kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Protein7.130e-19076.60kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Protein9.030e-5547.08kinase domain-containing protein n=3 Tax=Aphanomyc... [more]
Protein1.670e-5347.08kinase domain-containing protein n=3 Tax=Aphanomyc... [more]
Aste57867_124741.060e-5245.34protein n=1 Tax=Aphanomyces stellatus TaxID=120398... [more]
Uncharacterized2.680e-5148.54protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
CAMK/CAMKL/MARK4.610e-5146.50protein kinase n=1 Tax=Aphanomyces invadans TaxID=... [more]
Protein1.270e-4944.76kinase domain-containing protein n=1 Tax=Aphanomyc... [more]
Protein2.580e-4946.50kinase domain-containing protein (Fragment) n=1 Ta... [more]
Protein1.290e-4846.12kinase domain-containing protein n=10 Tax=Phytopht... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig924contigE_fasciculatus_S2_contig924:554..6956 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score104.0
Seed ortholog evalue1.3e-19
Seed eggNOG ortholog42099.EPrPV00000015404
Model size3341
KEGG koko:K08796
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.Serine threonine protein kinase. Source PGD
EggNOG OGs1MEPX@121069,KOG0583@1,KOG0583@2759
Ec32 ortholog descriptionProtein kinase-like domain
Ec32 orthologEc-10_005570.1
EC2.7.11.1
Cds size909
COG Functional cat.T
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001,ko03036,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig924.17298.1prot_E_fasciculatus_S2_contig924.17298.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig924 1639..3245 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842573.982823-UTR-E_fasciculatus_S2_contig924:553..8821696842573.982823-UTR-E_fasciculatus_S2_contig924:553..882Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig924 554..882 +
1696842573.9956396-UTR-E_fasciculatus_S2_contig924:1490..15091696842573.9956396-UTR-E_fasciculatus_S2_contig924:1490..1509Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig924 1491..1509 +
1696842574.0059793-UTR-E_fasciculatus_S2_contig924:1581..16381696842574.0059793-UTR-E_fasciculatus_S2_contig924:1581..1638Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig924 1582..1638 +
1696842574.0597825-UTR-E_fasciculatus_S2_contig924:3245..40851696842574.0597825-UTR-E_fasciculatus_S2_contig924:3245..4085Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig924 3246..4085 +
1696842574.0770366-UTR-E_fasciculatus_S2_contig924:4418..45431696842574.0770366-UTR-E_fasciculatus_S2_contig924:4418..4543Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig924 4419..4543 +
1696842574.0878608-UTR-E_fasciculatus_S2_contig924:4933..50321696842574.0878608-UTR-E_fasciculatus_S2_contig924:4933..5032Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig924 4934..5032 +
1696842574.0981123-UTR-E_fasciculatus_S2_contig924:5993..69561696842574.0981123-UTR-E_fasciculatus_S2_contig924:5993..6956Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig924 5994..6956 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842574.023798-CDS-E_fasciculatus_S2_contig924:1638..18081696842574.023798-CDS-E_fasciculatus_S2_contig924:1638..1808Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig924 1639..1808 +
1696842574.0337918-CDS-E_fasciculatus_S2_contig924:2157..22661696842574.0337918-CDS-E_fasciculatus_S2_contig924:2157..2266Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig924 2158..2266 +
1696842574.0434783-CDS-E_fasciculatus_S2_contig924:2615..32451696842574.0434783-CDS-E_fasciculatus_S2_contig924:2615..3245Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig924 2616..3245 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig924.17298.1

>prot_E_fasciculatus_S2_contig924.17298.1 ID=prot_E_fasciculatus_S2_contig924.17298.1|Name=mRNA_E_fasciculatus_S2_contig924.17298.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=303bp
MGVILYAMLAGNLPFEKELLACSRFAKFGAWARMPSATASLLAHCSGNPK
DAMDMDCLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWV
LDGRLYSGSGGSSSDGSDFSAGGAGGGAEDDWRAPDPQNIPSELLGADSD
TEDEEEHNNTGSREWKESCDMGLLHPPGYTPAVSQPPPPPPPPPRPVVVV
AATPPEKKQSSSVGRKGVGVSPTQEVTAKTKPPSTTAAVPVELRGIREEE
ESLAGSSPRVDGRGSARVGQGDPDAAAAGGGGQASVENEAHSSSGTATTY
HP*
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mRNA from alignment at E_fasciculatus_S2_contig924:554..6956+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig924.17298.1 ID=mRNA_E_fasciculatus_S2_contig924.17298.1|Name=mRNA_E_fasciculatus_S2_contig924.17298.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6403bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig924:554..6956+ (Ectocarpus fasciculatus EfasUO2)
CAGGTGGACTGCGGCGCAGACGAAGGTGCCGCCCGGCACTACTTCCGGCA GCTCCTCTCCGGAGTCCGGCACTGCCACGACCGCGGCGTCTGCCACCGCG ACCTCAAGCCCGAAAACCTCCTCCTCGCCGATCCCCACGACTCCTCGGTC CTCAAGATCGCAGACTTCGGGTTCTCCGCCCTGTTCCGCGAGCTGGAGAC GGAGTCCTCCTCCGGGGATGATTCGTCGGGGCCCCCGACCGCCACCGTCG GCGGCGGCGGCGGCGTCGGCGTTACCGGGGCGGCCGGCGGCGCCGGAGGG CTGGCGTTGAGACGGCCGCGGTCGGGGCTGTCCCTGGGCGGGAGGGGGGC GAGGGGGACGGCGGGCGGCGGGGGGGGCGCGCGGGCGGCGGCGGGGGGCG GGGGGCGGAGCGGCGGCAAGGGCCGCGGGGTGCGGAGGCTGACGTCTGTT GTTGGGTCTCCTTACTACGTCGCCCCTGAGGTACGTATGTGACTTTTGGT TGTTTTTTTGGTCGCTGTTTTGGCTCGTGCTTCTTCTTCTTCTTCTTCCG GTGTTGCCACGCTCTGTCCTGTCCGACATGGATGTTTTGTCAAACGCGTG CAACGGCAGTGTTAATAGTCTACATCCCTTCTGGGGGCGGACTCTGTGGG AGGTTGGGCTGTGGGCGGAAGCAGGGATTGCCCGAAAGGGAGAGTGGGTA TATAGTATACCAGACGTTTTGCTGCGGGATACTTGTGCTCTCGTCGGTGT CTGCCGGTGATTTTTAGTTTTTTCGGGTGTGCACTCAACTTGCGTAAAAA CATATCCAATCCTGACTAACGCACAAGCCGTGCTTGGGCAAACGCTGCGC AGAAGTCGACGTACCCGGACGTGCCACACCTAAATACTACCAGAGGTAAT TGGCAGCAACGGACGAAAGTATAATCGTGAGTACAAGTCATGACCTTGGT TCAGCCGTTCACCCCGTGTCTGAATCGCGCTGTACCCCCAACTCTTTTGT GTTGGTGACGTCATGGATGGCTACACAGGTTCTGCGGGAGGAAAGCGGTG ACGGGTATGACGGGACCAAGGCGGACGTGTGGTCCATGGGCGTCATCCTC TACGCCATGCTCGCGGGCAACCTCCCCTTCGAGAAGGAGCTCCTGGCGTG CTCCCGCTTCGCGAAGTTCGGCGCGTGGGCGCGCATGCCTTCCGCGACGG CGTCTCTGCTCGCGCACTGCTCGGGCAACCCAAAGGACGCCATGGACATG GACTGGTCAGTGATTACTATCCGGAATCATCCTTCAGATTTTTTGTCGTG TTCTGTGTGTTTTTTGAGACGCACCCGAAGAGGCGGGACTACGCATGTTA GCGTGCAGGTGTGTCTATTGTGATAAAACCTACCCTGTATTCCTTGGGGG TCCCGTGAGTGCGAGCTAGACGTGTGCATCGAAATCCCGCCTGAGATTTT TCGATGCACGCCAGTCGTAGCCACCGCGCCTTCTTCTGTGCGTTCTGTAT GGTGTTGAGAGAGGAGGACCCCTGCTCTTGCTCTTGAGGCTCACCCTTTC GCGTGTCTGTTGTGCTCCGCCTTTTCCCCTCCTGGTATCGTACGCGCTGG ACAGCTTGGACTACCCCTCGTGGTTTTTCCCGCAGCACTTCAGCTTCGCC GCCAGGTCCTTGCTCTCCGGGCTGCTTCATCCCGATGCCTCCTGCAGGCT GTCTGTCCGTCAGGTGAAGTCCCCCTCTTCGGTCGGGGATGACTTGAATT TTAAGCTTGGTTATGCTCGGGGGTACGGGTTGGGGGTTAGGGTTAGAGAT GGGGATATGAACCCCCCTCCCTCCCCTCTCTATTTGATAGATTAAAAAAT GACTCTCGCGAAGGCGGCCCTAATGTACAGGTTGCAGGTTCGCGGGATCT GTTTTTGCCTAGGGCGTGACCTGTGTCGAGAGATGTGTGCCTTCCGGTCG TAGGATCAACGCCGTTGCCGCTTGGCGTGAAAGCGTTTTTCCTTGTGCCA ACATTTGCCTTACCGACAACTGCCCCTCGTGTTGCCCCTCAACGCCCGTT CTTACGCGCCAGGCTTTGCGACACCCGTGGGTCTTAGACGGGAGGCTCTA CTCCGGGTCGGGCGGTAGCAGCAGTGACGGCAGTGACTTCAGCGCCGGCG GTGCGGGGGGAGGCGCCGAAGACGACTGGCGGGCCCCCGATCCTCAGAAC ATTCCTTCTGAGCTTCTGGGTGCCGATTCCGACACGGAGGACGAAGAAGA ACACAACAACACTGGATCGCGGGAGTGGAAGGAGAGCTGCGACATGGGGC TTCTCCACCCCCCTGGGTATACCCCGGCAGTCTCGCAGCCCCCGCCGCCG CCGCCGCCGCCACCGCGGCCGGTTGTCGTTGTCGCCGCCACGCCTCCAGA GAAGAAGCAGAGTAGTAGCGTAGGACGGAAGGGGGTAGGGGTTAGCCCTA CCCAGGAGGTGACGGCCAAGACAAAGCCACCGTCCACGACGGCGGCGGTG CCCGTGGAACTCCGGGGCATCAGGGAGGAGGAGGAAAGCCTCGCGGGATC GAGCCCGAGGGTTGATGGCAGGGGCTCCGCGAGGGTTGGTCAGGGGGACC CCGATGCGGCGGCGGCGGGGGGGGGGGGGCAGGCAAGCGTCGAAAACGAG GCCCACTCCTCGTCCGGCACCGCCACCACCTACCACCCGTGATGGAAGCC TCATGCCATCGACGGAGACTAAGGAGGACAACGCTGGCCGGGGGAAGAAG AAGCAGCAGCCGTCGGGAGGAGATGGCGAGCATATAGCGAGTAGATCATC TGGAGGAGAGGAGGAGGAAGAAGCGGTGACGCCGAAGGGCGAGAGGGGGG TCGGCGGAGGAGATGGGAAGGGGGTAGAGCTCGAGATAGGCGGCGGCGGC GGCGGCAGACAGGTGTTGTCGGCGAGGCGGGTCACGGCCGCCCCCGAGGT TTCTGCTGCTGCGGAAGCCGCGGGAGGAAGAGGCGGCGAAAGAAGCCAAG ATGGCAGCGATCACAGCAGCGGCGGTAGCCGCCGTTGCGTCGGCGGCAGC CGGCGCGGCGAAAACAATGACGCCGGCGGCTTCGCCGCCGCTTCCGCCGC CGCCGCTCGCTCCCGTCGAGGTGACGGACCCTTTCACCACCCCGCCCCGC AAGCTGCGCTCGCCGCGGCCCCTTGACGCCTTCTCGTCTCCTCCGTTAGC CCCCGTGGGATCAGGGAGGGCGGTGGAGGAGGAGGAGTCGGAGTTTTCTC TCGACGGCGGAGGGCCGGCACTCCCGCCAGAGAAGGGGCGGGCGAGGAGC AGGGAAGGGCTACCCCCGGCGGGGCCGGGCCACGCGAGGTCAAGGGGCGA GAACTCATCCGCCTTCTCGCTGGGAGTCGTGGAACGCCAGCTGAGCATGG GCGTGGCCGGGATCTCGATCATGGAGGCGGCGGGGCAGGCGGAGAAGAGG GAGGGCGTGGTTGCAGCGGCGGCGGCTCCGCCTCCTGCTTTCCACGACCT GGTGAAGCGATCGACTAGGTTCATGACTTCGGGTAAGCTTGTTGTACAGG AGTGGGATGGGAAGGGTTCTTGTGTCTTTGAGGGGCGCACAGAAATCGCA GACACGTATGCATACCCCACCGTCGCTGTTTTTTATAGGAGGGTGTGTGT GCGCTGCCGATGAGCCGGCTTGGCGCATTTCAATCTTGAATGGTACAGTG GTATATGGTAAGCTGAGTGGGGTTGCCACCAACCGAAACCAGTGCTGCTG TAGACACGTTTGGCTCAATCGGCTCGCTCGTTTCTGAAGCAAGCCCTCTC TCAATCGGCTCCCTTTCTGTCTCGCTGGTCTGTCTCGCTGATGCCCGAAA CCTTGTCCTTGTCAGTGCCCGCGGCGGTTGTCCTCCGCAAGATCGCCACC ATCATCGACGCGGACGCTCACCCGCTCCCTTACCCGTACCGCAACATCAA GCAGAAGGCGGTCGTTCACCAGGACGACTACAAGCTTGAGGTAAGGGGCG GGGGGGTTTTAGTGCAGTCTAAATCCATGTGAAAAGGACGGGAGCCCGAA AAATCGGGACGCTGGCCTGTCAGCGGCCCACGGGGATATTGAACGGAAGG AAGATAGAAAAAAGATAACCGATGCGATACACCTGTTGCTGTTCTTGAAA GACTGAAAATATGCATAGGGCGTGGCACAGGACCATTGCATCGTTCGACG ACTGTCGAAAACACACGCACAAATCTAGCGAGACCTTCCACGCCCATTTC TTTTTGACATCCACCGCGAGGTCGCTTGACGCCTCGTCCTGTCTTGCCTT GCCTTGCCTTGTCTTGCCTTGCCTTGCCTTGCCTTGCCTTGCTGCCTGCG CCGGTTCCGGATACTGTTGCCTGCCATCAGATCATGCGGGGCGGGGTGTT GGTGTGCACGGTTCAGATCTACCTGCTGGGCGGCGAGCAGGGGGCGGCGC AGTACATGGTGGAGTTTCTCAGAGGCCAGGTGGGAGGCGTGTTTGTTGTC CTTGTTTTCCGGCGTTGTTGCTCGCTTCCAAGCGGTTTTTGTGTTTTGTG GACCGTGCGTCCGGTGCGTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC TACCGTAGATGATATGATGTAAGATACCACCCCCCCTGGACCGATTTTCA AACCTCGATTATTACTTTTTAGCAACAGTCGGTGACGTTGCCGAAAAAAC CCGCGGGTTCGAAAGTTGGCGTCGAATGGTTACTTTCGGGAAACGTGTCG GTTTGGTGTTTGCATCCCCCTTTTTCGTGCCCCTTTGTGATGAAGTCTAA TCGAGCTTGTAACCATTGTGTCAGGGGGTGTGGTATCTTGTGCGACTGCG ATAGGCCACGTAAGCTGTCTGATCCAGAAGGACCGGGACATGGGGGCGAC ATGGTCGTGAACCGGTGCAGTGTTTCGATCAAACTGGGAGACGATTATGG CGTGTCATCCCACTCGGTGTTCTACATTGTAGTTTGAGCTCTTTGAGGCT CTTGCTTACCACCAGCAGTACCGGCCTGCTCACAAGGGTGCAAGCCGTAA GAATATCAGGCCCAGATTTTGTGTGTCAAGATTGCAAGAAAATCGTTTTT GTGGGCAGTTTGGCTCAGCTGCTCTGGTGCTCCCCTGCATCCTACTTGTA CACGGGTTGGTTAAATAGCACTGTAGCCTCTGCTCAATCGTCGCGACACA CACACAACAAATCTTGTGAGCGGGCAGCCAATGCTGTAAGATGGGTGCTG TCTGATGTATTGCGATATTGCCATGGATTTTGAAGGGCGACATTTGCACG GTACGTGGAGAAAAAATGCATTTTCGGTAACCTCGTGCACAAGACTGAGA AGCGCTACCATCCCCTTCTCCCGCCGCGCCCCACTGCTGTTCGTTGCTGT GATTCCCCATGAACATATTTGCGATATGGACTGCCGATAGTTGGACATAT TTTTGTTCAAGCGCTTCTATGAGGACGTTCGGTGCAAGCTGAACGACCTA GTCAAGAAGGATTACAGCTTAGCCCTACTGGAATCGGGCACCTGCACGCA CAGGTTCAGCCGGTTTTCGAATCTCGCCTGACGGGGCAGGGAGAACGAAC TCCTTTGAAGTAGCATAGGTTGGTTGACCCGTACTGTCGTTATCCCTCGT GTCCCCTTCAAGCGTAATAGCTGCTGCATGTCGTGGCTGTCTGTCGTTTC ACGGAAATTAAATGGTTTATTATTTTTGTTTCGAGGTTGGTTCGTGTGTG TGCACAAGTTAGTGGTAGGGAGGCGATGGTATCGACGAGCAGCGTGTTTT GAAAGGAGGCCAGGGAGTCGGCTCGTTTTTATAGAGAGGGTGGACTATTT AGTCGCCGGCCCTTCGTTCGTTTTCATTGGGGGGGGTGCCGCAGGTGCTT GCTTGTTGGCGACGATTTGGCGGTGCCCCTTTTCCGCATCATCACTCGTG CTTCTTGCCCGGTTTCTACTAAGTATGTGTGTTGTTGTTTGTACTATCGA GATGTTGATGTTGTTGTTGCTGCTGCTGTCCGCGCCCCACTCATCATCTG GCCTGATGAACACAGTCCAGTGGCGCGCCACTGCGACGACTGAGTTGCGG GCGACGTTTGAACGCGCGGACTCTGCGGCGACGGCGGCAAAAGATATCAA TCAAGCCCCGGCGGGCTGGCTCCCCCCACCGTAGGCGGGCCTGGTCCCGC ATGTATGTTGGTTTTTCCGGCGGTTTCGTTGTTCGAAGCAAGAGCAAAAA ATATTTTTTTGTTTATTTTGTTTTGCTTCGTTCTCCCGGCGTCGCGTAAC AGTAGATTTTTTTGGCTACCGCAATGGTACCGCTGCTCTTTGGGCAGACG CAACTATTTGGCTTTTTTGTCCTGAAAACTATGCTACAGTTTTTTACAGG GAT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig924:554..6956+

>mRNA_E_fasciculatus_S2_contig924.17298.1 ID=mRNA_E_fasciculatus_S2_contig924.17298.1|Name=mRNA_E_fasciculatus_S2_contig924.17298.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=909bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig924:554..6956+ (Ectocarpus fasciculatus EfasUO2)
ATGGGCGTCATCCTCTACGCCATGCTCGCGGGCAACCTCCCCTTCGAGAA
GGAGCTCCTGGCGTGCTCCCGCTTCGCGAAGTTCGGCGCGTGGGCGCGCA
TGCCTTCCGCGACGGCGTCTCTGCTCGCGCACTGCTCGGGCAACCCAAAG
GACGCCATGGACATGGACTGCTTGGACTACCCCTCGTGGTTTTTCCCGCA
GCACTTCAGCTTCGCCGCCAGGTCCTTGCTCTCCGGGCTGCTTCATCCCG
ATGCCTCCTGCAGGCTGTCTGTCCGTCAGGCTTTGCGACACCCGTGGGTC
TTAGACGGGAGGCTCTACTCCGGGTCGGGCGGTAGCAGCAGTGACGGCAG
TGACTTCAGCGCCGGCGGTGCGGGGGGAGGCGCCGAAGACGACTGGCGGG
CCCCCGATCCTCAGAACATTCCTTCTGAGCTTCTGGGTGCCGATTCCGAC
ACGGAGGACGAAGAAGAACACAACAACACTGGATCGCGGGAGTGGAAGGA
GAGCTGCGACATGGGGCTTCTCCACCCCCCTGGGTATACCCCGGCAGTCT
CGCAGCCCCCGCCGCCGCCGCCGCCGCCACCGCGGCCGGTTGTCGTTGTC
GCCGCCACGCCTCCAGAGAAGAAGCAGAGTAGTAGCGTAGGACGGAAGGG
GGTAGGGGTTAGCCCTACCCAGGAGGTGACGGCCAAGACAAAGCCACCGT
CCACGACGGCGGCGGTGCCCGTGGAACTCCGGGGCATCAGGGAGGAGGAG
GAAAGCCTCGCGGGATCGAGCCCGAGGGTTGATGGCAGGGGCTCCGCGAG
GGTTGGTCAGGGGGACCCCGATGCGGCGGCGGCGGGGGGGGGGGGGCAGG
CAAGCGTCGAAAACGAGGCCCACTCCTCGTCCGGCACCGCCACCACCTAC
CACCCGTGA
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