mRNA_E_fasciculatus_S2_contig920.17264.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig920.17264.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H8_ECTSI) HSP 1 Score: 561 bits (1446), Expect = 4.780e-193 Identity = 300/340 (88.24%), Postives = 317/340 (93.24%), Query Frame = 3
Query: 183 VNPRQLVNKREEQGFTALHIAVMMGAAGCARKLLDVGADPKARTPEGATPIVMAAQGTGQPGAPELQEGGXXXXXXXXXXXXXXQTERDEVVGTVPMHTAIYSGRLGVFKTLLAGPGGEVAVNTKDTQGATPLHIACRAKGAAGPVAAMTLLEEGCPVVVDFSVRDDSGRTPLYDAVHHGHAEVVKLLLAAGSDPSLQDSTGLSPLGATAWLGKEACLDAILGTESGLATLELANNLGATPLIFACQENNESIAQKLIAAGASLDAKDLTGQTPYIIAKAQKASACVKLLTEEHGRPSREEESFNFAASSMITNLGGGTLMGMSGGGVNISTTKDKETDG 1202
+NPR+LVN+REEQGFTALHIAVMMGAA CARKLLD GADPKA TPEGATPI MAAQGTGQPGAPELQEGGXXXXXXXXXXXXXXQTERD+VVGTVP+HTA+YSGRL VF TLLAGPGGEVAVNTKD+QGATPLH ACRAKGAAGPVAAM LLEEGCPV VD SVRDDSGRTPL+DA HHGHAEVVKLLLAAGSDPSLQDS+GLSPL ATAWLGKEACLDAILGTE GLATLEL NNLGATPLIFACQENN+ IA+KLIAAGASLDAKDLTGQTPYIIAKAQKASAC+KLLTEEHGRPS+EEESFNF SM+TNLGGGTLMGM GGVN+STT++ DG
Sbjct: 1 MNPRELVNRREEQGFTALHIAVMMGAADCARKLLDAGADPKASTPEGATPITMAAQGTGQPGAPELQEGGXXXXXXXXXXXXXXQTERDKVVGTVPLHTAVYSGRLEVFNTLLAGPGGEVAVNTKDSQGATPLHSACRAKGAAGPVAAMALLEEGCPVAVDVSVRDDSGRTPLFDAAHHGHAEVVKLLLAAGSDPSLQDSSGLSPLSATAWLGKEACLDAILGTERGLATLELTNNLGATPLIFACQENNKDIAKKLIAAGASLDAKDLTGQTPYIIAKAQKASACLKLLTEEHGRPSQEEESFNFDGLSMVTNLGGGTLMGMRDGGVNMSTTQETTPDG 340
BLAST of mRNA_E_fasciculatus_S2_contig920.17264.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW25_9PHAE) HSP 1 Score: 135 bits (339), Expect = 4.990e-34 Identity = 71/84 (84.52%), Postives = 75/84 (89.29%), Query Frame = 3
Query: 738 KLLLAAGSDPSLQDSTGLSPLGATAWLGKEACLDAILGTESGLATLELANNLGATPLIFACQENNESIAQKLIAAGASLDAKDL 989
+LLLAAGSDPSLQDS+GLS + AT WLGKEACLD ILGTE GL TLEL NNLGATPLIFACQENN+ IA KLIAAGASLDAKDL
Sbjct: 6 QLLLAAGSDPSLQDSSGLSSVSATTWLGKEACLDPILGTERGLTTLELTNNLGATPLIFACQENNKGIA-KLIAAGASLDAKDL 88
BLAST of mRNA_E_fasciculatus_S2_contig920.17264.1 vs.
Match: Hypothetical (protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818KRB4_9BILA) HSP 1 Score: 75.1 bits (183), Expect = 1.400e-10 Identity = 78/313 (24.92%), Postives = 133/313 (42.49%), Query Frame = 3
Query: 123 VIEACVEGNTERLTSLVDSAVNPRQLVNKREEQGFTALHIAVMMGAAGCARKLLDV-GADPKARTPEGATPIVMAAQGTGQPGAPELQEGGXXXXXXXXXXXXXXQTERDEVVGTVPMHTAIYSGRLGVFKTLLAGPGGEVAVNTKDTQGATPLHIACRAKGAAGPVAAMTLLEEGCPVVVDFSVRDDSGRTPLYDAVHHGHAEVVKLLLAAGSDPSLQDSTGLSPLGATAWLGKEACLDAILGTESGLATLELANNLGATPLIFACQENNESIAQKLIAAGASLDAKDLTGQTPYIIAKAQKASACVKLLTE 1058
+ EAC + + E++ L++ N +N+ EQG TALH CAR LL+ + + EG + + +A G T D + ++ +H G L +F L+ E V+T D GA P+H A + G P ++ +L++ VD + D+ RTP A + +++L AG++P D L+ L A G +C+ ++ E ++E + G TPL +A + + + L+ A+ + KD G+TP A + C+K L E
Sbjct: 6 LFEACQKVDIEQIKYLIEQKYN----INQLNEQGRTALHYCCDHQNIDCARLLLEYDNSIINIKDNEGFSALHLACLN------------GNYIMVKYFCEQGADVTLVDNELHSL-IHWITVCGHLDLFDILVQY---EAPVHTSDIYGAFPIHYASQLCGNNDPAKSLAILKKLIDNNVDVNCLDEQKRTPFIWAASANAIDALRILYKAGANPLHTDKDSLTALHCAATCGHTSCIRMLI--ELYGCSIESEDINGCTPLFYAITLEHSNACRVLLDLKANSNHKDNRGRTPSHCAALKGNINCLKHLIE 296
BLAST of mRNA_E_fasciculatus_S2_contig920.17264.1 vs.
Match: Hypothetical (protein n=4 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821BSN6_9BILA) HSP 1 Score: 75.1 bits (183), Expect = 3.080e-10 Identity = 78/313 (24.92%), Postives = 133/313 (42.49%), Query Frame = 3
Query: 123 VIEACVEGNTERLTSLVDSAVNPRQLVNKREEQGFTALHIAVMMGAAGCARKLLDV-GADPKARTPEGATPIVMAAQGTGQPGAPELQEGGXXXXXXXXXXXXXXQTERDEVVGTVPMHTAIYSGRLGVFKTLLAGPGGEVAVNTKDTQGATPLHIACRAKGAAGPVAAMTLLEEGCPVVVDFSVRDDSGRTPLYDAVHHGHAEVVKLLLAAGSDPSLQDSTGLSPLGATAWLGKEACLDAILGTESGLATLELANNLGATPLIFACQENNESIAQKLIAAGASLDAKDLTGQTPYIIAKAQKASACVKLLTE 1058
+ EAC + + E++ L++ N +N+ EQG TALH CAR LL+ + + EG + + +A G T D + ++ +H G L +F L+ E V+T D GA P+H A + G P ++ +L++ VD + D+ RTP A + +++L AG++P D L+ L A G +C+ ++ E ++E + G TPL +A + + + L+ A+ + KD G+TP A + C+K L E
Sbjct: 6 LFEACQKVDIEQIKYLIEQKYN----INQLNEQGRTALHYCCDHQNIDCARLLLEYDNSIINIKDNEGFSALHLACLN------------GNYIMVKYFCEQGADVTLVDNELHSL-IHWITVCGHLDLFDILVQY---EAPVHTSDIYGAFPIHYASQLCGNNDPAKSLAILKKLIDNNVDVNCLDEQKRTPFIWAASANAIDALRILYKAGANPLHTDKDSLTALHCAATCGHTSCIRMLI--ELYGCSIESEDINGCTPLFYAITLEHSNACRVLLDLKANSNHKDNRGRTPSHCAALKGNINCLKHLIE 296
BLAST of mRNA_E_fasciculatus_S2_contig920.17264.1 vs.
Match: Uncharacterized (protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5HWH9_9HYME) HSP 1 Score: 75.1 bits (183), Expect = 4.140e-10 Identity = 88/311 (28.30%), Postives = 129/311 (41.48%), Query Frame = 3
Query: 132 ACVEGNTERLTSLVDSAVNPRQLVNKREEQGFTALHIAVMMGAAGCAR---KLLDVGADPKARTPEGATPIVMAAQGTGQPGAPELQEGGXXXXXXXXXXXXXXQTERDEVVGTVPMHTAIYSGR-LGVFKTLLAGPGGEVAVNTKDTQGATPLHIACRAKGAAGPVAAMTLLEEGCPVVVDF------SVRDDSGRTPLYDAVHHGHAEVVKLLLAAGSDPSLQDSTGLSPL-GATAWLGKEACLDA---ILGTESGLATLELANNLGATPLIFACQENNESIAQKLIAAGASLDAKDLTGQTP-YIIAK 1019
AC G + ++ +P LV E G + LH+ + + +LL GADP +G+TP+ + + +++ Q ER G P+H A+ G +G LL N + G+T LH+ CR G LLE V DF + +D G TPL+ AV H H E V+LLL GSDPSL ++ G +PL G GK L I +S L + +N G TPL A N + + L+ G + + G TP ++IA+
Sbjct: 804 ACKYGLDDVAEKFLELGQDPNCLV---PETGDSTLHLVATINFEYFEKSIIRLLKHGADPNQSNEDGSTPLHVICRNDKYYSYHKIRRLFEVIDDFQQTVLIDAQDER----GDTPLHLALKDGNDVGTVDELLRRGANP---NLANEDGSTSLHVICR-NNKYGYYMIQRLLES----VEDFQQTALINAQDKRGDTPLHLAVKHCHDEEVELLLRRGSDPSLANAQGQTPLHGVCRSNGKYYMLPLFFDICDEKSHPVLLNVRDNEGNTPLHLAISCGNAEMIESLLRRGTDPNLPNAKGLTPLHLIAR 1099
BLAST of mRNA_E_fasciculatus_S2_contig920.17264.1 vs.
Match: Hypothetical (protein n=3 Tax=Rotaria sordida TaxID=392033 RepID=A0A818QJB4_9BILA) HSP 1 Score: 73.6 bits (179), Expect = 4.270e-10 Identity = 77/315 (24.44%), Postives = 134/315 (42.54%), Query Frame = 3
Query: 123 VIEACVEGNTERLTSLVDSAVNPRQLVNKREEQGFTALHIAVMMGAAGCARKLLDVGADP-KARTPEGATPIVMAAQGTGQPGAPELQEGGXXXXXXXXXXXXXXQTERDEVVGTVPMHTAIYSGRLGVFKTLLAGPGGEVAVNTKDTQGATPLHIACRAKGAAGPVAAMTLLEEGCPVVVDFSVRDDSGRTPLYDAVHHGHAEVVKLLLAAGSDPSLQDSTGLSPLGATAWLGKEACLDAILGTESGLATLELANNLGATPLIFACQENNESIAQKLIAAGASLDAKDLTGQTPYIIAKAQKASACVKLLTEEH 1064
+ EAC + + E++ L++ N +NK EQG TALH CAR LL+ + EG + + +A G T D + ++ +H G + +F L+ + ++T D GA P+H A + G P+ +T+L++ D + D+ RTP A + +++L AG++P D L+ L A G +C+ ++ E +LE + G TPL +A + ++ + L+ A+ + KD G+TP A + C+K L E +
Sbjct: 3 LFEACQKVDIEQVKYLIEQNFN----INKLNEQGRTALHYCCDHENIDCARLLLENDKSIINIKDNEGFSALHLACLN------------GNLIMVKYFCEQGADVTLVDNELHSL-IHWITVCGHVDLFDILVQY---QTPIHTSDIYGAFPIHYASQLCGNNDPIKNLTILKKLIDNNADVNCLDEQKRTPFIWAASANAIDALRILYKAGANPLHADKDSLTALHCAATCGHLSCIRMLI--ELYGCSLESEDINGCTPLYYAITFEHLNVCRVLLHLKANPNHKDHRGRTPSHCAALKGNINCLKCLIEHN 295
BLAST of mRNA_E_fasciculatus_S2_contig920.17264.1 vs.
Match: ankyrin-1-like (n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI000C71A4EA) HSP 1 Score: 73.9 bits (180), Expect = 8.650e-10 Identity = 76/284 (26.76%), Postives = 122/284 (42.96%), Query Frame = 3
Query: 144 GNTERLTSLVDSAVNPRQLVNKREEQGFTALHIAVMMGAAGCARKLLDVGADPKARTPEGATPIVMAAQGTGQPGAPELQEGGXXXXXXXXXXXXXXQTERDEVVGTVPMHTAIYSGRLGVFKTLLAGPGGEVAVNTKDTQGATPLHIACRAKGAAGPVAAM---TLLEEGCPVVVDFSVRDDSGRTPLYDAVHHGHAEVVKLLLAAGSDPSLQDSTGLSPLGATAWLGKEACLDAI---LGTE-SGLATLELANNLGATPLIFACQENNESIAQKLIAAGASL 974
G + L S++ A++ R LVN R+ +G T LH+A+ G A LL+ GADP G TP+ + P+ ++ Q + H A KTLL VN G T LH+ C+ + + T+ + V +D RD+ G TPL+ AV GH +++ LLL G+DP++ + + ++PL ++ L + + E S L +++ + LG TPL +A +I L+ GA L
Sbjct: 472 GLEDDLASILLRAISIRHLVNYRDNEGNTPLHLALFRGHTRVAASLLESGADPNLANNLGQTPLHVVCN------RPD-RDSARIFLNASEAVNRAVQVNVQDRXXXXXXHLAAECSNARAIKTLLRRGARPNLVNR---HGLTTLHVICKRDCDDDDLLKIFFKTINKIHATVQID--ARDNLGETPLHVAVSLGHKKLINLLLRYGADPNMANKSKVTPLHIICKRDRDDGLVKMFFDVNEELSQLVLVDVQDKLGRTPLQWAVANLWPNIIDVLLDHGADL 743
BLAST of mRNA_E_fasciculatus_S2_contig920.17264.1 vs.
Match: Hypothetical (protein n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A819CPQ1_9BILA) HSP 1 Score: 73.6 bits (179), Expect = 1.090e-9 Identity = 77/313 (24.60%), Postives = 132/313 (42.17%), Query Frame = 3
Query: 123 VIEACVEGNTERLTSLVDSAVNPRQLVNKREEQGFTALHIAVMMGAAGCARKLLDV-GADPKARTPEGATPIVMAAQGTGQPGAPELQEGGXXXXXXXXXXXXXXQTERDEVVGTVPMHTAIYSGRLGVFKTLLAGPGGEVAVNTKDTQGATPLHIACRAKGAAGPVAAMTLLEEGCPVVVDFSVRDDSGRTPLYDAVHHGHAEVVKLLLAAGSDPSLQDSTGLSPLGATAWLGKEACLDAILGTESGLATLELANNLGATPLIFACQENNESIAQKLIAAGASLDAKDLTGQTPYIIAKAQKASACVKLLTE 1058
+ EAC + + E++ L++ N +N+ EQG TALH CAR LL+ + + EG + + +A G T D + ++ +H G L +F L+ E V+T D GA P+H A + G P ++ +L++ D + D+ RTP A + +++L AG++P D L+ L A G +C+ ++ E ++E + G TPL +A + + + L+ A+ + KD G+TP A + C+K L E
Sbjct: 6 LFEACQKVDIEQIKYLIEQKYN----INQLNEQGRTALHYCCDHQNIDCARLLLEYDNSIINIKDNEGFSALHLACLN------------GNYIMVKYFCEQGADVTLVDNELHSL-IHWITVCGHLDLFDILVQY---EAPVHTSDIYGAFPIHYASQLCGNNDPAKSLAILKKLIDNNADVNCLDEQKRTPFIWAASANAIDALRILYKAGANPLHTDKDSLTALHCAATCGHTSCIRMLI--ELYGCSIESEDINGCTPLFYAITLEHSNACRVLLDLKANSNHKDNRGRTPSHCAALKGNINCLKHLIE 296
BLAST of mRNA_E_fasciculatus_S2_contig920.17264.1 vs.
Match: Hypothetical (protein n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A816A672_9BILA) HSP 1 Score: 73.6 bits (179), Expect = 1.220e-9 Identity = 77/313 (24.60%), Postives = 132/313 (42.17%), Query Frame = 3
Query: 123 VIEACVEGNTERLTSLVDSAVNPRQLVNKREEQGFTALHIAVMMGAAGCARKLLDV-GADPKARTPEGATPIVMAAQGTGQPGAPELQEGGXXXXXXXXXXXXXXQTERDEVVGTVPMHTAIYSGRLGVFKTLLAGPGGEVAVNTKDTQGATPLHIACRAKGAAGPVAAMTLLEEGCPVVVDFSVRDDSGRTPLYDAVHHGHAEVVKLLLAAGSDPSLQDSTGLSPLGATAWLGKEACLDAILGTESGLATLELANNLGATPLIFACQENNESIAQKLIAAGASLDAKDLTGQTPYIIAKAQKASACVKLLTE 1058
+ EAC + + E++ L++ N +N+ EQG TALH CAR LL+ + + EG + + +A G T D + ++ +H G L +F L+ E V+T D GA P+H A + G P ++ +L++ D + D+ RTP A + +++L AG++P D L+ L A G +C+ ++ E ++E + G TPL +A + + + L+ A+ + KD G+TP A + C+K L E
Sbjct: 6 LFEACQKVDIEQIKYLIEQKYN----INQLNEQGRTALHYCCDHQNIDCARLLLEYDNSIINIKDNEGFSALHLACLN------------GNYIMVKYFCEQGADVTLVDNELHSL-IHWITVCGHLDLFDILVQY---EAPVHTSDIYGAFPIHYASQLCGNNDPAKSLAILKKLIDNNADVNCLDEQKRTPFIWAASANAIDALRILYKAGANPLHTDKDSLTALHCAATCGHTSCIRMLI--ELYGCSIESEDINGCTPLFYAITLEHSNACRVLLDLKANSNHKDNRGRTPSHCAALKGNINCLKHLIE 296
BLAST of mRNA_E_fasciculatus_S2_contig920.17264.1 vs.
Match: Uncharacterized (protein n=1 Tax=Gibberella fujikuroi TaxID=5127 RepID=A0A0I9XCG9_GIBFU) HSP 1 Score: 71.6 bits (174), Expect = 1.720e-9 Identity = 58/177 (32.77%), Postives = 81/177 (45.76%), Query Frame = 3
Query: 459 GTVPMHTAIYSGRLGVFKTLLAGPGGEVAVNTKDTQGATPLHIACRAKGAAGPVAAMTLLEEGCPVVVDFSVRDDSGRTPLYDAVHHGHAEVVKLLLAAGSDPSLQDSTGLSPLGATAWLGKE---ACLDAILGTESGLATLELANNLGATPLIFACQENNESIAQKLIAAGASLDA 980
G P+H AI + L+A + VN + G TPL IA A G + L E S + G T L+ AV G V LLL AG+ S D G +P+ AW+ +E D + + A +E +NLG+TP+++ACQ N + L+ AGASL A
Sbjct: 42 GQAPIHVAISENNFLGLEQLMAA---KADVNRQTLSGYTPLMIAA----ANGNNTMIQKLLEHSECKKRISQGNAQGVTALHFAVESGSLACVSLLLEAGAPASKTDDYGRTPMANLAWVNQEHQQEIYDTLKLLQDYGADIESKDNLGSTPVLWACQRGNVPVLGALVRAGASLGA 211 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig920.17264.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig920.17264.1 >prot_E_fasciculatus_S2_contig920.17264.1 ID=prot_E_fasciculatus_S2_contig920.17264.1|Name=mRNA_E_fasciculatus_S2_contig920.17264.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=404bp MQRVIEACVEGNTERLTSLVDSAVNPRQLVNKREEQGFTALHIAVMMGAAback to top mRNA from alignment at E_fasciculatus_S2_contig920:8418..13240- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig920.17264.1 ID=mRNA_E_fasciculatus_S2_contig920.17264.1|Name=mRNA_E_fasciculatus_S2_contig920.17264.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4823bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig920:8418..13240- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig920:8418..13240- >mRNA_E_fasciculatus_S2_contig920.17264.1 ID=mRNA_E_fasciculatus_S2_contig920.17264.1|Name=mRNA_E_fasciculatus_S2_contig920.17264.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1212bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig920:8418..13240- (Ectocarpus fasciculatus EfasUO2)back to top |