mRNA_E_fasciculatus_S2_contig9130.17204.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9130.17204.1
Unique NamemRNA_E_fasciculatus_S2_contig9130.17204.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9130.17204.1 vs.
Match: Similar (to A-kinase anchoring protein 18 gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT6_ECTSI)

HSP 1 Score: 497 bits (1280), Expect = 1.600e-175
Identity = 264/309 (85.44%), Postives = 275/309 (89.00%), Query Frame = 1
Query:   43 ARHGGGGAPRGRHRGAGAAVRPRGNANRSPRPTHFLSVRIDNPQIWTKISTIQGDILAGNQHLADAAIPVEVSHLTLFVLTLSEKDGSLQQAKDTLEHCGDLLLEHDLSPPEVGLQASASITESVPDDGMHSAALGTGEGNETAPGATAASPLTLSFRDLGHFRNKVLFAKLVEDEHATRLRGLVSSLHRRFSEAGLVEEAAGFPSDRGGKRGGXXXXXXXGTSG--DSFEFTPHLTIMKTSKLRDRGILIPADSYDQYQSGFVVGHHAPSSVELSSMLKKEDGPSLEGWEPRPYYKCEHRLALCTPAV 963
            ARHGGGGAPRGR+R AGA+ RPRGNA+R PRPTHFLSVRIDNPQIW KISTIQGDILAGNQHL DAAIPV+ SHLTLFVLTLSEKDGSLQQA+DTLEHCGDLLLEH LSP EV LQASAS  ESVPDD MH AAL  G+ NETAPG  AASPL LSFRDLGHFRNK+LFAKLVEDE ATRLRGL SSLHRRFSEAGLVEEAAGFPS +G KRG XXXXXXX      DSFEFTPHLTIMKTSKLRDRG LIPADSYD+YQ+GFVVGHHAPSSVELSSML+KED P LEGWEPRPYYKCEHRL LCTPAV
Sbjct:   11 ARHGGGGAPRGRNRWAGASARPRGNASRPPRPTHFLSVRIDNPQIWAKISTIQGDILAGNQHLTDAAIPVQASHLTLFVLTLSEKDGSLQQARDTLEHCGDLLLEHGLSP-EVDLQASASRAESVPDDHMHPAALAIGDSNETAPGVAAASPLMLSFRDLGHFRNKILFAKLVEDEQATRLRGLASSLHRRFSEAGLVEEAAGFPSRKGEKRGDXXXXXXXXXXXXXDSFEFTPHLTIMKTSKLRDRGTLIPADSYDRYQNGFVVGHHAPSSVELSSMLEKEDVPPLEGWEPRPYYKCEHRLGLCTPAV 318          
BLAST of mRNA_E_fasciculatus_S2_contig9130.17204.1 vs.
Match: AKAP7_NLS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2C7_9PHAE)

HSP 1 Score: 400 bits (1027), Expect = 1.040e-137
Identity = 205/243 (84.36%), Postives = 215/243 (88.48%), Query Frame = 1
Query:  235 DAAIPVEVSHLTLFVLTLSEKDGSLQQAKDTLEHCGDLLLEHDLSPPEVGLQASASITESVPDDGMHSAALGTGEGNETAPGATAASPLTLSFRDLGHFRNKVLFAKLVEDEHATRLRGLVSSLHRRFSEAGLVEEAAGFPSDRGGKRGGXXXXXXXGTSGDSFEFTPHLTIMKTSKLRDRGILIPADSYDQYQSGFVVGHHAPSSVELSSMLKKEDGPSLEGWEPRPYYKCEHRLALCTPAV 963
            DAAIPV+ SHLTLFVL LSE+DGSLQQA+DTLEHCGDLLLEH LSP EV L ASAS TESVPDDGMH AALG G+ NETAPGATAASPLTLSFRDLGHFRNKVLFAKLVEDE ATRLRGL SSLH+RFSEAGLVE AAGFPS +GGKRG        GTS DSFEFTPHLTIMKTSKLRDRG LIPADSYD+YQSGF+VGHHAPSSVELSSML+KED P LEGWEP+PYYKCEHRL LCTP V
Sbjct:   35 DAAIPVQASHLTLFVLRLSEEDGSLQQARDTLEHCGDLLLEHGLSP-EVDLPASASSTESVPDDGMHPAALGIGDSNETAPGATAASPLTLSFRDLGHFRNKVLFAKLVEDEQATRLRGLASSLHQRFSEAGLVEGAAGFPSRKGGKRG--DGGDGSGTSSDSFEFTPHLTIMKTSKLRDRGTLIPADSYDRYQSGFLVGHHAPSSVELSSMLEKEDVPPLEGWEPKPYYKCEHRLDLCTPKV 274          
BLAST of mRNA_E_fasciculatus_S2_contig9130.17204.1 vs.
Match: A-kinase (anchor protein 7-like n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=A0A8C4TGZ9_ERPCA)

HSP 1 Score: 71.6 bits (174), Expect = 1.720e-10
Identity = 50/155 (32.26%), Postives = 74/155 (47.74%), Query Frame = 1
Query:  496 PLTLSFRDLGHFRNKVLFAKLVEDEHATRLRGLVSSLHRRFSEAGLVEEAAGFPSDRGGKRGGXXXXXXXGTSGDSFEFTPHLTIMKTS---KLRDRGIL-IPADSYDQYQSGFVVGHHAPSSVELSSMLKKEDGPSLEGWEPRPYYKCEHRLAL 948
            PL L F  +GHFRN+V+F K+VE E   +L+ +   L R F E G++                         +GDS +F PHLT MK S   KLR +GI  +    Y  +++    G+    +++L SMLKK+        +P  YY CE  + +
Sbjct:  187 PLLLPFHGIGHFRNEVVFVKMVEAEDFLKLKKITEVLRRAFEEKGIL-------------------------AGDSKDFKPHLTFMKLSRAPKLRSQGIKKLDPKLYKNFENQN-FGNEKLVNLDLCSMLKKK--------QPNGYYHCEASITV 307          
BLAST of mRNA_E_fasciculatus_S2_contig9130.17204.1 vs.
Match: A-kinase (anchor protein 7 isoform X2 n=1 Tax=Polypterus senegalus TaxID=55291 RepID=UPI0019649A51)

HSP 1 Score: 68.9 bits (167), Expect = 2.510e-9
Identity = 49/154 (31.82%), Postives = 73/154 (47.40%), Query Frame = 1
Query:  499 LTLSFRDLGHFRNKVLFAKLVEDEHATRLRGLVSSLHRRFSEAGLVEEAAGFPSDRGGKRGGXXXXXXXGTSGDSFEFTPHLTIMKTS---KLRDRGIL-IPADSYDQYQSGFVVGHHAPSSVELSSMLKKEDGPSLEGWEPRPYYKCEHRLAL 948
            L L F  +GHFRN+V+F K+VE E   +L+ +   L R F E G++                         +GDS +F PHLT MK S   KLR +GI  +    Y  +++    G+    +++L SMLKK+        +P  YY CE  + +
Sbjct:  292 LILPFHGIGHFRNEVVFVKMVEAEDFLKLKKITEVLRRAFEEKGIL-------------------------AGDSKDFKPHLTFMKLSRAPKLRSQGIKKLDPKLYKNFENQN-FGNEKLVNLDLCSMLKKK--------QPNGYYHCEASITV 411          
BLAST of mRNA_E_fasciculatus_S2_contig9130.17204.1 vs.
Match: A-kinase (anchor protein 7 isoform X1 n=4 Tax=Polypteridae TaxID=8289 RepID=UPI00196263FF)

HSP 1 Score: 68.9 bits (167), Expect = 2.530e-9
Identity = 49/154 (31.82%), Postives = 73/154 (47.40%), Query Frame = 1
Query:  499 LTLSFRDLGHFRNKVLFAKLVEDEHATRLRGLVSSLHRRFSEAGLVEEAAGFPSDRGGKRGGXXXXXXXGTSGDSFEFTPHLTIMKTS---KLRDRGIL-IPADSYDQYQSGFVVGHHAPSSVELSSMLKKEDGPSLEGWEPRPYYKCEHRLAL 948
            L L F  +GHFRN+V+F K+VE E   +L+ +   L R F E G++                         +GDS +F PHLT MK S   KLR +GI  +    Y  +++    G+    +++L SMLKK+        +P  YY CE  + +
Sbjct:  292 LILPFHGIGHFRNEVVFVKMVEAEDFLKLKKITEVLRRAFEEKGIL-------------------------AGDSKDFKPHLTFMKLSRAPKLRSQGIKKLDPKLYKNFENQN-FGNEKLVNLDLCSMLKKK--------QPNGYYHCEASITV 411          
BLAST of mRNA_E_fasciculatus_S2_contig9130.17204.1 vs.
Match: AKAP7_NLS (domain-containing protein n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NP42_STRPU)

HSP 1 Score: 61.6 bits (148), Expect = 1.630e-7
Identity = 65/275 (23.64%), Postives = 113/275 (41.09%), Query Frame = 1
Query:  133 RPTHFLSVRIDNPQIWTKISTIQGDILAGNQHLADAAIPVEVSHLTLFVLTLSEKDGSLQQAKDTLEHCGDLLLEHDLSPPEVGLQASASITESVPDDGMHSAALGTGEGNETAPGATAASPLTLSFRDLGHFRNKVLFAKLVEDEHATRLRGLVSSLHRRFSEAGLVEEAAGFPSDRGGKRGGXXXXXXXGTSGDSFEFTPHLTIMKTSK--LRDRGIL-IPADSYDQYQSGFVVGHHAPSSVELSSMLK--KEDGPSLEGWEPRPYYKCEHRL 942
            RP +F+++++ +P+I   +  +Q  ++ G+  L +A +P+   HLT+ V+ L+  D  + +AK  L  C  LL       PE+  +                                    L +SF+ LGHF N+V+FAK+ +      + G++ +L +         +  G  S                   D+  F PHLT++K S+  +   G+  I ++ Y  + S  + G+   S  +L SM K   EDG          YY  EH +
Sbjct:   15 RPNYFVAIQVGSPEIHEALHNVQQTMVDGDTRLREAMVPIPSLHLTIMVMHLAT-DDDVDRAKVALIECNRLL---GYRIPEIKRRK-----------------------------------LNISFQGLGHFNNRVVFAKIRD------IDGILDTLDKVAETVKECYKIKGIKST------------------DTRRFNPHLTVVKLSRDSVYKTGVRSIRSELYCDH-SDTLFGNQPVSGFQLCSMSKPKSEDG----------YYYKEHEV 215          
BLAST of mRNA_E_fasciculatus_S2_contig9130.17204.1 vs.
Match: A-kinase (anchor protein 7-like n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=A0A8C4TJ37_ERPCA)

HSP 1 Score: 62.0 bits (149), Expect = 2.690e-7
Identity = 48/156 (30.77%), Postives = 72/156 (46.15%), Query Frame = 1
Query:  496 PLTLSFRDLGHFRNKVLFAKLVEDEHATR-LRGLVSSLHRRFSEAGLVEEAAGFPSDRGGKRGGXXXXXXXGTSGDSFEFTPHLTIMKTS---KLRDRGIL-IPADSYDQYQSGFVVGHHAPSSVELSSMLKKEDGPSLEGWEPRPYYKCEHRLAL 948
            PL L F  +GHFRN+V+F K+VE E   + +   +    R F E G++                         +GDS +F PHLT MK S   KLR +GI  +    Y  +++    G+    +++L SMLKK+        +P  YY CE  + +
Sbjct:  135 PLLLPFHGIGHFRNEVVFVKMVEAEDFLKHMAAHLEFAKRAFEEKGIL-------------------------AGDSKDFKPHLTFMKLSRAPKLRSQGIKKLDPKLYKNFENQN-FGNEKLVNLDLCSMLKKK--------QPNGYYHCEASITV 256          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9130.17204.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
Similar1.600e-17585.44to A-kinase anchoring protein 18 gamma n=1 Tax=Ect... [more]
AKAP7_NLS1.040e-13784.36domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
A-kinase1.720e-1032.26anchor protein 7-like n=1 Tax=Erpetoichthys calaba... [more]
A-kinase2.510e-931.82anchor protein 7 isoform X2 n=1 Tax=Polypterus sen... [more]
A-kinase2.530e-931.82anchor protein 7 isoform X1 n=4 Tax=Polypteridae T... [more]
AKAP7_NLS1.630e-723.64domain-containing protein n=2 Tax=Strongylocentrot... [more]
A-kinase2.690e-730.77anchor protein 7-like n=1 Tax=Erpetoichthys calaba... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9130contigE_fasciculatus_S2_contig9130:1474..3351 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score496.9
Seed ortholog evalue7.1e-138
Seed eggNOG ortholog2880.D8LFT6
Preferred nameAKAP7
Model size966
KEGG koko:K16524,ko:K18666
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001508,GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005886,GO:0006810,GO:0006811,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0008022,GO:0008104,GO:0008144,GO:0008150,GO:0009719,GO:0009966,GO:0009987,GO:0010033,GO:0010243,GO:0010646,GO:0010738,GO:0010959,GO:0012505,GO:0014070,GO:0014074,GO:0016020,GO:0016208,GO:0016324,GO:0016328,GO:0016528,GO:0016529,GO:0017076,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0022898,GO:0023051,GO:0023052,GO:0030133,GO:0030315,GO:0030554,GO:0031410,GO:0031982,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032947,GO:0032991,GO:0033036,GO:0034237,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035556,GO:0036094,GO:0042221,GO:0042383,GO:0042391,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0044093,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045177,GO:0046683,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051018,GO:0051049,GO:0051050,GO:0051179,GO:0051234,GO:0051591,GO:0051716,GO:0060306,GO:0065007,GO:0065008,GO:0065009,GO:0070382,GO:0070887,GO:0071310,GO:0071320,GO:0071407,GO:0071417,GO:0071495,GO:0071944,GO:0097159,GO:0097367,GO:0097708,GO:0098590,GO:0099053,GO:0099503,GO:1901016,GO:1901018,GO:1901265,GO:1901363,GO:1901379,GO:1901381,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902259,GO:1902261,GO:1902531,GO:1903818,GO:1904062,GO:1904064,GO:2001257,GO:2001259
Exons4
EggNOG free text desc.positive regulation of delayed rectifier potassium channel activity
EggNOG OGsKOG2814@1,KOG2814@2759
Ec32 ortholog descriptionRNA ligase/cyclic nucleotide phosphodiesterase
Ec32 orthologEc-01_000990.1
Cds size966
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842565.1155534-CDS-E_fasciculatus_S2_contig9130:1473..21271696842565.1155534-CDS-E_fasciculatus_S2_contig9130:1473..2127Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9130 1474..2127 -
1696842565.1289062-CDS-E_fasciculatus_S2_contig9130:2375..25011696842565.1289062-CDS-E_fasciculatus_S2_contig9130:2375..2501Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9130 2376..2501 -
1696842565.144128-CDS-E_fasciculatus_S2_contig9130:2928..30711696842565.144128-CDS-E_fasciculatus_S2_contig9130:2928..3071Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9130 2929..3071 -
1696842565.163204-CDS-E_fasciculatus_S2_contig9130:3308..33511696842565.163204-CDS-E_fasciculatus_S2_contig9130:3308..3351Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9130 3309..3351 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9130.17204.1prot_E_fasciculatus_S2_contig9130.17204.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9130 1474..3351 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9130.17204.1

>prot_E_fasciculatus_S2_contig9130.17204.1 ID=prot_E_fasciculatus_S2_contig9130.17204.1|Name=mRNA_E_fasciculatus_S2_contig9130.17204.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=322bp
RAGAHITVTTSGHKARHGGGGAPRGRHRGAGAAVRPRGNANRSPRPTHFL
SVRIDNPQIWTKISTIQGDILAGNQHLADAAIPVEVSHLTLFVLTLSEKD
GSLQQAKDTLEHCGDLLLEHDLSPPEVGLQASASITESVPDDGMHSAALG
TGEGNETAPGATAASPLTLSFRDLGHFRNKVLFAKLVEDEHATRLRGLVS
SLHRRFSEAGLVEEAAGFPSDRGGKRGGGGGGGGSGTSGDSFEFTPHLTI
MKTSKLRDRGILIPADSYDQYQSGFVVGHHAPSSVELSSMLKKEDGPSLE
GWEPRPYYKCEHRLALCTPAV*
back to top

mRNA from alignment at E_fasciculatus_S2_contig9130:1474..3351-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9130.17204.1 ID=mRNA_E_fasciculatus_S2_contig9130.17204.1|Name=mRNA_E_fasciculatus_S2_contig9130.17204.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1878bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9130:1474..3351- (Ectocarpus fasciculatus EfasUO2)
AGAGCGGGAGCGCACATCACCGTCACAACCTCGGGCCATAAGGGTGCGTT TGGAGGCGACCGACTTCGCGAATGATGGGTAGCTTGCATGTCGATATGGA CCAAAATATTGCAGGGCCCATCTGCTGCCCGGATTGGTAGCCTCTGTTTG AATTCAAATTTGCGCATGTTCATTCGCCGTCGTCACTGCTTTGTATCCCG CCAGGCGCACCCAATTGCGTGGTAGGAGTATAAGTCAGCGGATTCGTGGA TGATTTCGGCGTTTGTTCTGTACATGGCAGCAAGGCACGGAGGCGGCGGA GCTCCTCGAGGACGCCATCGAGGGGCCGGAGCAGCGGTAAGGCCACGGGG GAACGCAAACCGATCGCCTCGACCCACCCACTTCTTATCGGTGCGGATCG ACAACCCGCAGATATGGACAAAGGTGAGTGCTACAAAGCAGTACTGCTGT AGTAGTGCCCTGTCTCCTTGTAGCGTGTTCATCCGTATGGCATGTATTGG GGCTGAGCCGAGGTCTCGCCGAAAGAGACGTCGCGCATCAATACCAGCAG TACAGGCGCGCAGATAAGAACGTCAACCTTCGGGTCGACCAAAGGTCGAC ATTCATTCATTCATTTGTTTTAAGAGCACAGGGTTTAGACTAGTGTGGGA TCCACCGCTGAGCGATGTTTCTTCCAGAGTAGATCTGTGTATTTTCATAT ATTCGTGGAAATCTGAGCCTCTGTTCCTTAACAAAATGTTTCGTAACTTT TGAGCCCGTACTGCTGCGGTGACAAAATGTTTCTCAACTGCGGGCCTGTA CTGCTGTAGTGTAACAAAATGCTGTCGCTCGGTTAATCCTGACTGATCAG ATCTCAACCATCCAGGGCGACATCTTGGCCGGTAACCAGCACCTAGCAGA CGCGGCAATCCCGGTCGAAGTCTCGCACCTGACGCTCTTCGTGCTGACGC TAAGCGAGAAAGACGGTAGCCTGCAGGTGAATTTGAAGAGCGCGATGCCG TCGGATACAAACAAACACAAGGTCGATACATTGTATAACATTCGCTACAG AGCACGGCATGTATGAAGACATTGTTGGGTCATCAGCGACTTGGAAATTT TCACGAGCGTTCTCCCGCGTGGTGCATCGGTACCCAACTCTGGAGTACTC GACGCCCGAATGCATATCACCAGTTAACTTTCTTTGAGCCAAGCATCACA CATTCATTCGTCTTCTGCCCGCAGCAAGCCAAAGATACCCTCGAACACTG CGGAGACCTCCTGCTGGAGCACGACCTCTCCCCCCCTGAAGTCGGCCTCC AGGCATCAGCTAGCATCACAGAAAGCGTGCCTGATGACGGCATGCATTCG GCTGCTCTCGGCACAGGAGAGGGCAACGAGACAGCGCCGGGGGCAACGGC GGCCTCACCCTTGACGCTCTCCTTCCGAGACCTCGGTCACTTTCGGAACA AGGTTTTGTTCGCAAAGCTTGTGGAAGACGAGCACGCGACCAGGCTCAGG GGGTTGGTGTCCTCGCTCCACCGACGGTTTTCCGAGGCCGGTCTCGTGGA AGAAGCCGCGGGTTTTCCCAGCGATAGGGGTGGAAAGAGGGGCGGCGGGG GCGGGGGCGGTGGAAGCGGCACCAGCGGCGACAGCTTCGAGTTCACGCCT CACCTCACAATCATGAAGACTTCGAAGCTCAGGGATAGGGGCATCTTGAT ACCGGCCGATTCGTACGACCAGTATCAGAGCGGTTTTGTTGTCGGGCATC ACGCACCGTCTAGCGTCGAACTGTCGAGCATGCTGAAGAAGGAAGATGGG CCGTCTTTGGAGGGTTGGGAGCCCAGACCGTACTACAAGTGCGAGCATAG GCTCGCTCTCTGCACCCCTGCGGTGTAA
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9130:1474..3351-

>mRNA_E_fasciculatus_S2_contig9130.17204.1 ID=mRNA_E_fasciculatus_S2_contig9130.17204.1|Name=mRNA_E_fasciculatus_S2_contig9130.17204.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=966bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9130:1474..3351- (Ectocarpus fasciculatus EfasUO2)
AGAGCGGGAGCGCACATCACCGTCACAACCTCGGGCCATAAGGCAAGGCA
CGGAGGCGGCGGAGCTCCTCGAGGACGCCATCGAGGGGCCGGAGCAGCGG
TAAGGCCACGGGGGAACGCAAACCGATCGCCTCGACCCACCCACTTCTTA
TCGGTGCGGATCGACAACCCGCAGATATGGACAAAGATCTCAACCATCCA
GGGCGACATCTTGGCCGGTAACCAGCACCTAGCAGACGCGGCAATCCCGG
TCGAAGTCTCGCACCTGACGCTCTTCGTGCTGACGCTAAGCGAGAAAGAC
GGTAGCCTGCAGCAAGCCAAAGATACCCTCGAACACTGCGGAGACCTCCT
GCTGGAGCACGACCTCTCCCCCCCTGAAGTCGGCCTCCAGGCATCAGCTA
GCATCACAGAAAGCGTGCCTGATGACGGCATGCATTCGGCTGCTCTCGGC
ACAGGAGAGGGCAACGAGACAGCGCCGGGGGCAACGGCGGCCTCACCCTT
GACGCTCTCCTTCCGAGACCTCGGTCACTTTCGGAACAAGGTTTTGTTCG
CAAAGCTTGTGGAAGACGAGCACGCGACCAGGCTCAGGGGGTTGGTGTCC
TCGCTCCACCGACGGTTTTCCGAGGCCGGTCTCGTGGAAGAAGCCGCGGG
TTTTCCCAGCGATAGGGGTGGAAAGAGGGGCGGCGGGGGCGGGGGCGGTG
GAAGCGGCACCAGCGGCGACAGCTTCGAGTTCACGCCTCACCTCACAATC
ATGAAGACTTCGAAGCTCAGGGATAGGGGCATCTTGATACCGGCCGATTC
GTACGACCAGTATCAGAGCGGTTTTGTTGTCGGGCATCACGCACCGTCTA
GCGTCGAACTGTCGAGCATGCTGAAGAAGGAAGATGGGCCGTCTTTGGAG
GGTTGGGAGCCCAGACCGTACTACAAGTGCGAGCATAGGCTCGCTCTCTG
CACCCCTGCGGTGTAA
back to top