mRNA_E_fasciculatus_S2_contig901.17107.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig901.17107.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ7_ECTSI) HSP 1 Score: 492 bits (1267), Expect = 3.830e-169 Identity = 253/308 (82.14%), Postives = 260/308 (84.42%), Query Frame = 1
Query: 178 MMMRVNRRWREEVITDRKAPDPEKGKQVLPPPPREGILFFAYGAETTTAEHYLQQAITSARRIKLLNPGMNITLVTNPGMHPDISGAFDNVVNVEQKLLYSGTVQSWNPNGVSRQWLTRLEYLARSPYETTLALDSQALCCAPDVEDFLKKSRVEEFDLAFAVQNPDLLAPHNWAILYRKNENTKRLFNRWRVLQIEYSRAGSDQQTLEMAAGSLALQGKLNVSVISENLALATVVYNRTVPTFPKTSMLIDPGPIHFVHYDAASHEDAEMTCRKLNRHWSLARVVVMPAPFPQSEESGLRIESNYKM 1101
MMMRVNR+ REEVITDRKAP PEKG+ VLPP EGILFFAYGAE TTAEHYLQQAITSARRIKLLNP NITLVTNPGM PDI GAFD VVNVE+KLLYSGTVQSWNPNGVSRQWLTRLEYLARSPY QNPDLLAPHNWAILYRKNENTKRLFNRWRVLQIEYSRAGSDQQTLEMAAGSLALQGKLNVSVISENLALATVVYNRTVPTFPKTSMLIDPGP+HFVHYDAAS EDAEMTCRKLNRHWSLARVVVMPAPFP+SEE+GLRIESNYK+
Sbjct: 1 MMMRVNRKRREEVITDRKAPGPEKGQDVLPPAAPEGILFFAYGAEITTAEHYLQQAITSARRIKLLNPSTNITLVTNPGMRPDIDGAFDAVVNVEEKLLYSGTVQSWNPNGVSRQWLTRLEYLARSPY-----------------------------------QNPDLLAPHNWAILYRKNENTKRLFNRWRVLQIEYSRAGSDQQTLEMAAGSLALQGKLNVSVISENLALATVVYNRTVPTFPKTSMLIDPGPVHFVHYDAASDEDAEMTCRKLNRHWSLARVVVMPAPFPKSEETGLRIESNYKV 273
BLAST of mRNA_E_fasciculatus_S2_contig901.17107.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ5_ECTSI) HSP 1 Score: 347 bits (891), Expect = 1.390e-112 Identity = 168/266 (63.16%), Postives = 206/266 (77.44%), Query Frame = 1
Query: 190 VNRRWREEVITDRKAPDPEKGKQVLPPPPREGILFFAYGAETTTAEHYLQQAITSARRIKLLNPGMNITLVTNPGMHPDISGAFDNVVNVEQKLLYSGTVQSWNPNGVSRQWLTRLEYLARSPYETTLALDSQALCCAPDVEDFLKKSRVEEFDLAFAVQNPDLLAPHNWAILYRKNENTKRLFNRWRVLQIEYSRAGSDQQTLEMAAGSLALQGKLNVSVISENLALATVVYNRTVPTFPKTSMLIDPGPIHFVHYDAASHEDAE 987
V+R+W + D +P P P +G+LFFAYG+ET+TAEHYL+Q + SARRIK LNP NIT+VTNPG+ P++ G FD VV+VE+K LY G QSW P G++RQW TRLEY++RSPYE TLALDSQALCC VED L + EEFD+AFAVQ P +L PHNWAILYR N+ T+RLF+RW+ LQ+ Y+R+GSDQ TL MAAGSLAL+G+LNV V+++N ALATV+YNRTV FPKTS L+DP P+HFVHYDA SHEDAE
Sbjct: 11 VHRQWSQHTGGDAFESNP-------PDPTGQGVLFFAYGSETSTAEHYLEQVLVSARRIKSLNPSTNITVVTNPGIRPEVEGVFDVVVHVEEKHLYRGKQQSWGPKGLARQWFTRLEYISRSPYEVTLALDSQALCCGTSVEDILTEGG-EEFDIAFAVQGPRMLGPHNWAILYRLNDRTRRLFDRWKSLQLAYARSGSDQLTLHMAAGSLALKGELNVGVLAQNAALATVIYNRTVAEFPKTSTLVDPRPVHFVHYDAQSHEDAE 268
BLAST of mRNA_E_fasciculatus_S2_contig901.17107.1 vs.
Match: Hypothetical (protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EV89_9EUKA) HSP 1 Score: 107 bits (266), Expect = 1.990e-20 Identity = 95/316 (30.06%), Postives = 140/316 (44.30%), Query Frame = 1
Query: 283 GILFFAYGAETTTAEHYLQQAITSARRIKLLNPGMNITLVTNPGMHPDISGAFDNVVNVEQKLLYSGTVQSWNPNGVSRQWLTRLEYLARSPYETTLALDSQALCCAPD-----VEDFLKKSRVEEFDLAFAVQN--PDLLAPHNWAILYRKNENTKRLFNRWRVLQIEYSRAGSDQQTL---EMAAGSLALQGKLNVSVISENLALATVVYN-----RTVPTFPKTSMLIDP---GPIHFVHYDAASHEDAEMTCRKLNRHWSLARVVVMPAPFPQSEESGLRIESNYKMAYSEHELAEATSTVRSDASYFRGLD 1176
G+LFFAYG + T +H+L +A +A+ + NP + I +++N + + FD + + LL+ G + + RQWLTRL YLA SP+E T ALDS + C P +ED L SR+ F +A A QN D++ PHN+ I+Y + T L W + + DQ+TL EM + Q L V +S A N PT + I P G +H +H S C N +VV+ PA Q G NY + ++ E ++ + D Y G D
Sbjct: 61 GLLFFAYGGDLTL-QHFLVEATQAAQSFRAANPQIRIAILSN---NASVDAVFDLHIRPRRDLLFEGDNSQRRADRIPRQWLTRLYYLAHSPFELTWALDSNVVTCTPGAAQAFLEDALA-SRLWGFHIAHASQNLLSDVMYPHNFNIVYIWCQITADLLREWFLTALGEGVTSDDQKTLHISEMRLHARNPQYGLQVGRVSPEYGAAFYNVNDRGSAARQPTPRADRLRISPYLLGSVHILHTSNQS------LCAIFNSGRRGRQVVMRPAL--QDPTDGRTAGFNYAVLWTREECSQQ---LAPDQRYCLGAD 360
BLAST of mRNA_E_fasciculatus_S2_contig901.17107.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3XA82_9SPIT) HSP 1 Score: 89.0 bits (219), Expect = 9.840e-16 Identity = 71/232 (30.60%), Postives = 106/232 (45.69%), Query Frame = 1
Query: 376 NPGMNITLVTNPGMHPDISGAFDNVVNVEQKLLYSGTV-----QSWNPNGVSRQWLTRLEYLARSPYETTLALDSQALCCAPD-VEDFLKKS---RVEEFDLAFAVQNPDLLAPHNWAILYRKNENTKRLFNRWRVLQIEYSRAGSDQQTLEMAAGSLALQGKLNVSVISENLALATVVYNRTVPTF-PKTSMLIDPGPIHFVHYDAASHEDAEMTCRKLNRHWSLARVVVM 1041
+P +N+ +V+N P+ F + + L++ G Q + RQWLTRL YLA +P+E T ALDS + C P VE FL K+ R+ +D+A A Q + PHNW+IL+ N L W +LQ+ A DQ TL A G L V + + T Y+ T F P+ + + G + +H A H + C N ++V+M
Sbjct: 7 SPAINMAVVSNNRTVPE--DLFHYHIRPREDLIFQGEACPYGEQHCQKHVARRQWLTRLFYLAHTPFELTWALDSNVVNCVPGGVEAFLSKAMKARLWGYDIAHANQAKGSMYPHNWSILFLWNTRVASLLRDWLLLQLRRGVAKDDQATLFAAEQRQRASGGLRVGQVPTRYS--TAFYSATGKGFYPRITRPLS-GAAYILHAKPAYHA---LWCTAFNNETRTRQLVLM 230
BLAST of mRNA_E_fasciculatus_S2_contig901.17107.1 vs.
Match: Uncharacterized (protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CJX9_DIALT) HSP 1 Score: 86.3 bits (212), Expect = 2.010e-14 Identity = 68/230 (29.57%), Postives = 101/230 (43.91%), Query Frame = 1
Query: 283 GILFFAYGAETTTAEHYLQQAITSARRIKLLNPGMNITLVTNPGMHPDISGAFDNVVNVEQKLLYSG-----------TVQSWNPNGVSRQWLTRLEYLARSPYETTLALDSQALCCAPDVEDFLKK---SRVE---EFDLAFAVQNPDLLAPHNWAILYRKNENTKRLFNRWRVLQIEYSRAGSDQQTLEMAAGSLALQGKLNVSVISENLALATVVYNRTVPTFPKTS 921
G+L FAY L+ A SARR+K L+P + + L TN + G FD++V +EQ+ + G + ++ P V Q LTR+ YLARSP+ TLAL+ A+ CA V+ L S E +FD+A + Q + + +L R N T+ L W V + L A G L + +S + V R P +P+ S
Sbjct: 72 GVLLFAYAESAQALASRLEAATASARRMKALSPRLRVALATNG---EPVRGVFDHIVAIEQRHVLDGGDPAAGKASESSAPTFRP--VESQALTRIYYLARSPFALTLALEGTAIACAGGVDAALHALLDSAAEGEGQFDVAVSTQMQTESSHASTVLLIRANAATRALLRDWFVEHLNSGPTADPAPALARALARALAAGSLRRAALSSSF----VAQVRHAPPWPRDS 292
BLAST of mRNA_E_fasciculatus_S2_contig901.17107.1 vs.
Match: Uncharacterized (protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XG91_DIALT) HSP 1 Score: 79.3 bits (194), Expect = 7.130e-12 Identity = 87/314 (27.71%), Postives = 128/314 (40.76%), Query Frame = 1
Query: 283 GILFFAYGAETTTAEHYLQQAITSARRIKLLNPGMNITLVTNPGMHPDISGA----------FDNVVNVEQK-LLYSGTVQSWNPNGVSRQWLTRLEYLARSPYETTLALDSQAL-CCAPDVEDFL----------------KKSRVEE--------------------------FDLAFAVQNPDLLA--PHNWAILYRKNENTKR-LFNRWRVLQIEYSRAGSDQQTLEMAAGSLALQGKLNVSVISENLALATV-VYNRTVPTFPKTSMLIDPGPIHFVHYDAASHEDAEMTCRKLNR--HWSLARVVVMP 1044
G+L FAYG Y +A+ +A ++ NP + I + +N P++S A F V+ + ++Y TV+ +W+TR Y+A SP+E TLALDS AL C A D D + +RV FDLAF N L + PHNWA+LY R LF W + + ++ G DQ LE AA + A G L ++ + N A A V + +P+ + ++ G H H A + C LN H RV++ P
Sbjct: 116 GVLLFAYGESAELVRKYGAEAVQTAEALRRTNPRLPIAIASN---FPNVSAASGARLFRTPPFALVLPIRHDHMVYPSTVRP------RYEWVTRAHYMALSPFELTLALDSHALPCTADDARDEAAARAGASAHPRASAAERVARVRPARAWRAGNELAAVLEALPAVGSARRWFDLAF---NTFLTSGRPHNWALLYYTRAPAMRALFTDWYLAYL--AQGGDDQGPLEHAARARARAGGLRLARMHANFAGAFERVDDFQRSDWPRATHVLS-GAAHLFHVRYADEQMRRQLCAMLNARAHIRRRRVLIQP 414
BLAST of mRNA_E_fasciculatus_S2_contig901.17107.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4J5I7_9EUKA) HSP 1 Score: 66.2 bits (160), Expect = 1.070e-9 Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 1
Query: 511 VSRQWLTRLEYLARSPYETTLALDSQALCCAP-DVEDFLKKSRVE---EFDLAFAVQN--PDLLAPHNWAILYRKNENTKRLFNRWRVLQIEYSRAGSDQQTL 801
+ RQWLTRL YLA SP+ T ALDS + C FL+++ +FD+A A QN + PHN+ I+YR ++ T L W + + + A DQ TL
Sbjct: 1 IPRQWLTRLYYLAHSPFYITWALDSNVISCTHGSAATFLERALTTALWDFDIAHASQNVLTQTMYPHNFNIVYRWSQPTSDLMREWLLQAMRHGVATDDQGTL 103
BLAST of mRNA_E_fasciculatus_S2_contig901.17107.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JC77_9EUKA) HSP 1 Score: 63.9 bits (154), Expect = 3.020e-7 Identity = 45/142 (31.69%), Postives = 65/142 (45.77%), Query Frame = 1
Query: 283 GILFFAYGAETTTAEHYLQQAITSARRIKLLNPGMNITLVTNPGMHPDISGAFDNVVNVEQKLLYSGTVQSWNPNGVSRQWLTRLEYLARSPYETTLALDSQALCCAPDVEDFLKKSRVEEFDLAFAVQNPDLLAPHNWAIL 708
G+L FAYG T +H++++A +A + NP + I +VTN F + LL++G + V RQWLTRL YLA+SPY T ALDS +V + F+L P +W +L
Sbjct: 200 GLLLFAYGGRKTL-QHFVREAQYAAASFREHNPTLPIAIVTNNETVD--RRIFTTHIMPRADLLFAGENDQNRSDKVPRQWLTRLYYLAQSPYHITWALDS-------NVNVLTETMYPHNFNLVVRWSAPSAALMRDWLLL 331 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig901.17107.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig901.17107.1 >prot_E_fasciculatus_S2_contig901.17107.1 ID=prot_E_fasciculatus_S2_contig901.17107.1|Name=mRNA_E_fasciculatus_S2_contig901.17107.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=410bp MMMRVNRRWREEVITDRKAPDPEKGKQVLPPPPREGILFFAYGAETTTAEback to top mRNA from alignment at E_fasciculatus_S2_contig901:1168..7775+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig901.17107.1 ID=mRNA_E_fasciculatus_S2_contig901.17107.1|Name=mRNA_E_fasciculatus_S2_contig901.17107.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6608bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig901:1168..7775+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig901:1168..7775+ >mRNA_E_fasciculatus_S2_contig901.17107.1 ID=mRNA_E_fasciculatus_S2_contig901.17107.1|Name=mRNA_E_fasciculatus_S2_contig901.17107.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1230bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig901:1168..7775+ (Ectocarpus fasciculatus EfasUO2)back to top |