prot_E_fasciculatus_S2_contig8837.16932.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8837.16932.1
Unique Nameprot_E_fasciculatus_S2_contig8837.16932.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length150
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8837.16932.1 vs. uniprot
Match: A0A6H5JHR4_9PHAE (DNA_pol_lambd_f domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR4_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 8.350e-26
Identity = 56/58 (96.55%), Postives = 56/58 (96.55%), Query Frame = 0 
Query:   79 TLRVALVGRGFSKNQQEVFRKNGSKLGMEVLVRPEAKVGKPPNLFEPPPGATPGKGKK 136
            TLRVALVGRGFSKNQQEVFRKNGSKLGMEVLVRPEAKVGKPPNLFE  PGATPGKGKK
Sbjct:  400 TLRVALVGRGFSKNQQEVFRKNGSKLGMEVLVRPEAKVGKPPNLFEASPGATPGKGKK 457
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8837.16932.1 vs. uniprot
Match: D8LNK4_ECTSI (DNA polymerase mu n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK4_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.040e-11
Identity = 48/78 (61.54%), Postives = 52/78 (66.67%), Query Frame = 0 
Query:   38 QGLDKHGDGAQGSPXXXXXXXXXXXXXXXXXXXXXXXXXXTTLRVALVGRGFSKNQQEVFRKNGSKLGMEVLVRPEAK 115
            QG+DK GDGA                        XXXXXX TLRVALVGRGFSKNQQEVFRKNGSK+G+EVLVRPE+K
Sbjct:   40 QGVDKQGDGAP-----------------------XXXXXXATLRVALVGRGFSKNQQEVFRKNGSKVGIEVLVRPESK 94
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8837.16932.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHR4_9PHAE8.350e-2696.55DNA_pol_lambd_f domain-containing protein n=1 Tax=... [more]
D8LNK4_ECTSI1.040e-1161.54DNA polymerase mu n=1 Tax=Ectocarpus siliculosus T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8837contigE_fasciculatus_S2_contig8837:3242..4183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8837.16932.1mRNA_E_fasciculatus_S2_contig8837.16932.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8837 3242..4183 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8837.16932.1 ID=prot_E_fasciculatus_S2_contig8837.16932.1|Name=mRNA_E_fasciculatus_S2_contig8837.16932.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=150bp
MKEAEEEEGDDWDGSDRQDGDGRSGEKEHQQRRRRQRQGLDKHGDGAQGS
PPPPPVAASEVTALASSRSSLAAAAAATTLRVALVGRGFSKNQQEVFRKN
GSKLGMEVLVRPEAKVGKPPNLFEPPPGATPGKGKKRRRSSCNERHHRTS
back to top