mRNA_E_fasciculatus_S2_contig8596.16717.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8596.16717.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6B0_9PHAE) HSP 1 Score: 521 bits (1343), Expect = 3.620e-181 Identity = 301/369 (81.57%), Postives = 315/369 (85.37%), Query Frame = 1
Query: 1 MRRSWLLCLLPLASRGGLAFVLPAAGPLHVAGGSTLLQ-VNAPCYWRSPMAVADPADAMRAIARPSAAHQQRSSPLRMMAKNTPPTGKTNYRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLEGFARPGMTVFQIVSKLLAGLAGVLLFGQALLDQQKERAFEVRREAIAAAPASAGGPGTDTAAGEGQVAFFDSVALGNDLEAKVMWAADIALQLTAACSFVMFSDGQVLARVGATGGELDASDTVAAAFKQATAAVVATAXAKTGEQDKGSXXXXXXXXXXXXXX-NDALMQLLPPACRQGVLCRVSCPSSGRGDGGGDVVVLLGSTVAGASVLAGMDGAWFERVCAFLALGPAAAGAGER 1101
MR S LL LLPLASRGGLAFVLPAAGPLHVAG STL Q VNAPC WR P+ ADPADA RAIARPSAAH+Q S+ LRMMAKNTPPTGKTNYRRPSAAIERGGGFFVPGLEGFKARFVL VVILGLL LEGFARPGMT+FQ++SKLLAGLAGVLLF QALLDQQKERAFE+RREAIAAAPASA GP TAAGEGQVAFFDS ALG+DLEAKVMWAADIALQLTAACSFVMFSDG+VLARVGATGGE DASDTVAAAFKQAT X XXXXXXX NDALMQLLP ACRQGVLC VS PSS G+GGGD+VVLLGST+AGA+VL+GMD AWFERVCAFLALGPAA GAGER
Sbjct: 1 MRPSSLLYLLPLASRGGLAFVLPAAGPLHVAGSSTLFQKVNAPCSWRPPIP-ADPADATRAIARPSAAHRQHSNTLRMMAKNTPPTGKTNYRRPSAAIERGGGFFVPGLEGFKARFVLGVVILGLLSLEGFARPGMTIFQLISKLLAGLAGVLLFAQALLDQQKERAFEMRREAIAAAPASAQGPAMGTAAGEGQVAFFDSAALGSDLEAKVMWAADIALQLTAACSFVMFSDGEVLARVGATGGESDASDTVAAAFKQATXXXXXXXXXXXXXXXXXXXXXXXXXKRSANGGDNDALMQLLPSACRQGVLCTVSFPSSRHGEGGGDLVVLLGSTLAGATVLSGMDAAWFERVCAFLALGPAAVGAGER 368
BLAST of mRNA_E_fasciculatus_S2_contig8596.16717.1 vs.
Match: Hypothetical (protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B697_CHRCT) HSP 1 Score: 71.6 bits (174), Expect = 6.770e-10 Identity = 61/181 (33.70%), Postives = 84/181 (46.41%), Query Frame = 1
Query: 190 PSAAHQQRSSPLRMMAKNTPPTGKTNYRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLEGFARPGMTVFQIVSKLLAGLAGVLLFGQALLDQQKERAFEVRREAIAAAPASAGGPGTDTAAGEGQVAFFDSVALGNDLEAKVM----WAADIALQLTAACSFVMFSDGQVLARVG 720
P+A RS P +AK P + Y+RP+AA+ERGGGF++PGLEG++ R ++ V+ L P +V Q VS+ L G + +LLF Q D+ E + RRE A S D L L+A+V W A L+L A VM DG+ L G
Sbjct: 82 PAAIRGVRSRPPLCLAK---PVKSSYYKRPAAALERGGGFYIPGLEGYRLRLLVGSVLSAALVANRITSPEPSVSQFVSEGLGGFSCLLLFIQVAADRAAEE--DDRRELARAIATSR---------------MEDRQQLAAQLDARVAEHAEWLARALLRLLPA-DVVMLLDGEALQTAG 241
BLAST of mRNA_E_fasciculatus_S2_contig8596.16717.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G9E4_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.250e-8 Identity = 56/181 (30.94%), Postives = 90/181 (49.72%), Query Frame = 1
Query: 268 YRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLE-GFARPGMTVFQIVSKLLAGLAGVLLFGQALLDQQKERAFEVRRE--AIAAAPASAGGPGTDTAAGEGQVAFFDSVALGNDLEAKVMWAADIALQLTAACSFVMFS-DGQVLARVGATGGELDASDTVAAAFKQATAAVVAT 798
Y RPSAAIE+G GF++PGLEG + R + ++ + L + A + Q +S+L+ + GVLL QAL++ KE F V + A++ G +D A+ G S + N + W A + LT A F+ D A++ + GG LD+ D+ K+A ++ + T
Sbjct: 8 YSRPSAAIEKGSGFYIPGLEGSRVRLLFGILAIALSYVNHNAATSAIGASQQLSELITSVFGVLLILQALIEFGKETGFGVSLDDGVRVNGIANSDGGASDKASTSGMAEII-SKDISNSETETLRWIAASYISLTPATHFLCLQRDDGSHAKIYSLGG-LDSGDSNNDGVKEAISSAITT 186
BLAST of mRNA_E_fasciculatus_S2_contig8596.16717.1 vs.
Match: Hypothetical (protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LMB5_9EUKA) HSP 1 Score: 67.4 bits (163), Expect = 1.300e-8 Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 1
Query: 229 MMAKNTPPTGKTNYRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLEGFARPGMTVFQIVSKLLAGLAGVLLFGQALLDQQKE 492
MMA+ P + Y+RP+AA+ERGGGF+VPGLEG + R A V+ L L A G+T Q+VS++L A LLF Q D+ E
Sbjct: 77 MMARQ-PKVKSSYYKRPAAALERGGGFYVPGLEGNRLRLAAACVLSLALLLNRIASQGVTSSQLVSEVLGAAACALLFIQVFSDRLAE 163
BLAST of mRNA_E_fasciculatus_S2_contig8596.16717.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RMV8_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 1.740e-8 Identity = 39/83 (46.99%), Postives = 48/83 (57.83%), Query Frame = 1
Query: 268 YRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLEGFARPGM---TVFQIVSKLLAGLAGVLLFGQALLDQQKERAFEV 507
Y RPSAAIERG GFFVPGLEG + R + +++L L + P T Q VS+ +A GVLL QA + KER F V
Sbjct: 38 YSRPSAAIERGSGFFVPGLEGSRVRILFGILVLILAFVNHVTAPLTELNTSGQSVSEAVAAFYGVLLLVQAFSEVGKERGFGV 120
BLAST of mRNA_E_fasciculatus_S2_contig8596.16717.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KLI9_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 2.280e-8 Identity = 57/154 (37.01%), Postives = 74/154 (48.05%), Query Frame = 1
Query: 268 YRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGL-----LGLEGFARPGMTVFQIVSKLLAGLAGVLLFGQALLDQQKERAFEVRREAIAAAPASAGGPG----TDTAAGE-GQVAFFDSVALGNDLEAKVMWAADIALQLTAACSFVMFSDG 699
Y RPSAAIERG GF++PGLEG++ R + V IL L L L+ + Q VS +A L G+LL QAL+D KE F A SA G ++ GE QV D + + WAA + LT A SF++ G
Sbjct: 68 YSRPSAAIERGSGFYIPGLEGYRVRILSGVSILALSFINTLFLDTPVSETASSLQ-VSVNVANLFGLLLLLQALVDFGKETIFSTDYAAAQTTVKSAAGSNAVAKSNKIIGELQQVVSEDLTSAEKTYVKSIQWAAATFISLTPATSFLVVKRG 220
BLAST of mRNA_E_fasciculatus_S2_contig8596.16717.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJU1_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 6.580e-8 Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 268 YRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLEGFARPGMT--VFQIVSKLLAGLAGVLLFGQALLDQ 483
Y+RPS AIE GGGFF+PGLEG+K R A+++L LL L + PG T Q+ S+ + A V+L QAL+++
Sbjct: 78 YKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRY--PGYTPAASQLTSEAIGAGAAVILLAQALIEK 149
BLAST of mRNA_E_fasciculatus_S2_contig8596.16717.1 vs.
Match: Hypothetical (protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NXR1_9EUKA) HSP 1 Score: 63.9 bits (154), Expect = 1.660e-7 Identity = 48/116 (41.38%), Postives = 65/116 (56.03%), Query Frame = 1
Query: 172 MRAIARPSAAHQQRSSPLRMMAKNTPPTGKTNY-RRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLEGFARPGMTVFQIVSKLLAGLAGVLLFGQALLDQQKERAFEVRRE 516
+RA A+P A R+ P +MA PP K Y +RP+AA+ERGGGF+VPGLEG + R +A V+ L + G+ Q+ S+ L A +L+F Q LD FE RRE
Sbjct: 44 VRAPAQPHA----RARPPVLMA--PPPKVKPGYYKRPAAAVERGGGFYVPGLEGSRLRLFVASVLSIALVVNHVFSAGVAPSQLGSEALGSCACLLIFVQVALDN-----FEERRE 148
BLAST of mRNA_E_fasciculatus_S2_contig8596.16717.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IK78_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.510e-7 Identity = 57/172 (33.14%), Postives = 86/172 (50.00%), Query Frame = 1
Query: 190 PSAAHQQRSSPLRMMAKNTPPTGKTN----YRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLEGFARPGMTVF---QIVSKLLAGLAGVLLFGQALLDQQKERAFEVRREAIAAAPASAGGPGTDTAAGEG----QVAFFDSVALGNDLEAKVMWAADIALQLTAA 672
P+ ++ RS LRM + + K+ Y RPSAAIERG GFF+PGLEG + R + ++L L + + + Q +S+ +A + G+LL QA ++ KE F V + AA+ GP TA+G Q+ D ++ +A V WAA + LT A
Sbjct: 80 PAVVYRPRSVALRMSSPSGDGKKKSKTSGVYARPSAAIERGSGFFIPGLEGSRVRLLFGAIVLVLTYVNRMSNEVGAMISEAQFLSETVAVVYGLLLLLQAAVEFGKELGFGVE-DPSAASMGVESGPAATTASGPSASVSQIISPDLASMDRVADA-VRWAAATFVALTPA 249
BLAST of mRNA_E_fasciculatus_S2_contig8596.16717.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZUJ8_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.900e-7 Identity = 39/83 (46.99%), Postives = 48/83 (57.83%), Query Frame = 1
Query: 268 YRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLEGFARPGM---TVFQIVSKLLAGLAGVLLFGQALLDQQKERAFEV 507
Y RPSAAIERG GFFVPGLEG + R + +++L L + P T Q VS+ +A GVLL QA + KER F V
Sbjct: 143 YSRPSAAIERGSGFFVPGLEGSRVRILFGILVLILAFVNHVTAPLTELNTSGQSVSEAVAAFYGVLLLVQAFSEVGKERGFGV 225 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8596.16717.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8596.16717.1 >prot_E_fasciculatus_S2_contig8596.16717.1 ID=prot_E_fasciculatus_S2_contig8596.16717.1|Name=mRNA_E_fasciculatus_S2_contig8596.16717.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=368bp MRRSWLLCLLPLASRGGLAFVLPAAGPLHVAGGSTLLQVNAPCYWRSPMAback to top mRNA from alignment at E_fasciculatus_S2_contig8596:1991..5357- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8596.16717.1 ID=mRNA_E_fasciculatus_S2_contig8596.16717.1|Name=mRNA_E_fasciculatus_S2_contig8596.16717.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3367bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8596:1991..5357- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8596:1991..5357- >mRNA_E_fasciculatus_S2_contig8596.16717.1 ID=mRNA_E_fasciculatus_S2_contig8596.16717.1|Name=mRNA_E_fasciculatus_S2_contig8596.16717.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1104bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8596:1991..5357- (Ectocarpus fasciculatus EfasUO2)back to top |