prot_E_fasciculatus_S2_contig8592.16713.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8592.16713.1
Unique Nameprot_E_fasciculatus_S2_contig8592.16713.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length923
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8592.16713.1 vs. uniprot
Match: D7G7E5_ECTSI (VHL domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E5_ECTSI)

HSP 1 Score: 1540 bits (3988), Expect = 0.000e+0
Identity = 801/922 (86.88%), Postives = 831/922 (90.13%), Query Frame = 0
Query:    1 MENLLPVVAGIDVTSNHFRETSLPYQQWQTTRTHHTPTTPSDVGHLLPPIGGRKTRRDDSGGSLPPVPPYVEPSLPRPAPVDRNRSGLYDPALDPSPIGKEERGRVQPVRISRIVPRQDSGLGAQELQGAARSAEGPPIPTVVTVLNGYRTQHRRDRTSAPGGDLTSAADVLSEDEESCIDVFVEGFSRGIDHETLLPSEMFCRALQNGSQGPPKSSSLISEDSRHLLDVREGYLGLTVLLARTSEWSGTVDGDVQGEKQDERIEPGIGDESDRDSEEFAAETAITRTIFQREDGTPAPSRNAFRVQFEPGPLGVELEEYPGERGIVRVRRVLQAGQAELDGRLSAGCLIVAVGGWDKSSPNSTLRPNTAAGAGAGVVALDGVDIYGNLDVPALRSSAMDGGSGAKAHKSAIIRSLVDFEEAVSCREPDRLFVLWALDRHAPEAVAALGPPQANGVSTVPRGWSPASLYARRSNEGGGRGRGAFPPGSERQRKFEASKSPKSQRPEDTAVPEGAPGWETATNLARGRDSLGYSLSSDGPNMTSFAXXXXXXXXXXXXXXXXXXXPEADLAMSAFGSPKEVTGSEILTAGIDRLGWPSREGEGGAQRFGEGGARSAKGWEFETGGGIFDDDDQGLAARKHPARSQATLAPAAAPADETEEKPPTFPLGLESSAVDDIAVFIWFCNNHESAVMKVSWIDYDGRRVPRRSLAPGACYFERSFATHPWVIQHSDSNQHGGSDESLHAGGQQEEECESSGRGAPAPLHPFPPREAGDDDXDEEFCVVRLGDAMALAQFTGSLIWNPTGRTLSITKQARVGVPGMSAAARAAVGAGVEDGGGLNPGMKRLCMAGQRREAEEARARAARAVVREEKARILEEMRAWRTHPLGGGGLGAGGXXXXXXXXKLGQGVPNLRVVMMGSSGWSE 922
            MENLLPVVAGIDVTSNHFRETSLPYQQW+T RTHHTPTTPS+VGHLLPPIGGRK RRD+SG SLPP+ PYVEPSLP PAPVDRNRSGLYDPALDPSPIGKEERG+VQPVRISRIVPRQDSGLGA ELQGAARSAEGP IPT VTVLNG+RTQH RDRTSAP GD  SAADVLSEDEE CIDVFVEGFSRGIDHETLLPSEMFCRALQ+GSQGPPK SSLI EDSRH LDVREGYLGLTV LARTSEWSGT+DG VQGEKQDE IEPGIGDESDRD  + A ET IT  IFQREDGTPAPSRNAFRVQFEPGPLGVELEEYPGERGIVRVRRVLQAGQAELDGRLSAGCLIVAVGGWD++S N  LRPNTA+GAGAG VALDGVDIYGNLDVPALRSSAMDGGSGAK+H+SAIIRSL DFEEAVSCREPDRLFVLWALDRHAPEAVAALGPPQANGV TVPRGWSPASLY+RR NEGGGR RGAFPPGSERQR FEAS SPK Q  E+T VP GAPGWETAT+LARGRDSLGYSLSSD P + S                 XXXX EADLA SAFGSPKEVTGSE L AGIDRLGWPSRE EGGA RFGEGGARSA+GWEFETGGGIFDD DQGLAARKHP RSQATLAPAAAPADETE+K PTFPLGLESSAVDD+AVFIWFCNNHESAVMKVSWI+YDGRRVPRRSLAPGACYFERSFATHPWVI+HSDSN +G  + SLHAGGQQEE+ ES+G GAPAPL P PPREAGDDD D E CVVRLGDAMALAQFTGSLIWNPTGRTLSITKQARVGVPGMSAAARAAVGAGVEDGGGL+PGMKR CMAGQRREAEEARARAARAVVREEKAR+LEEM+AWRTHPLGGGGLGAGG        KLGQGVPNLRVVMMG SGWSE
Sbjct:    1 MENLLPVVAGIDVTSNHFRETSLPYQQWETKRTHHTPTTPSEVGHLLPPIGGRKPRRDESGSSLPPISPYVEPSLPCPAPVDRNRSGLYDPALDPSPIGKEERGKVQPVRISRIVPRQDSGLGALELQGAARSAEGPHIPTAVTVLNGHRTQHMRDRTSAPAGDCASAADVLSEDEERCIDVFVEGFSRGIDHETLLPSEMFCRALQHGSQGPPKPSSLIPEDSRHYLDVREGYLGLTVFLARTSEWSGTIDGGVQGEKQDEPIEPGIGDESDRDDRKLATETEITHMIFQREDGTPAPSRNAFRVQFEPGPLGVELEEYPGERGIVRVRRVLQAGQAELDGRLSAGCLIVAVGGWDEASANGALRPNTASGAGAGHVALDGVDIYGNLDVPALRSSAMDGGSGAKSHESAIIRSLADFEEAVSCREPDRLFVLWALDRHAPEAVAALGPPQANGVCTVPRGWSPASLYSRRRNEGGGRARGAFPPGSERQRPFEASTSPKWQGYEET-VPAGAPGWETATSLARGRDSLGYSLSSDRPKLASSPRNQASHAAGGGQLQAXXXXREADLATSAFGSPKEVTGSERLAAGIDRLGWPSRESEGGAPRFGEGGARSAQGWEFETGGGIFDDSDQGLAARKHPGRSQATLAPAAAPADETEKKLPTFPLGLESSAVDDLAVFIWFCNNHESAVMKVSWINYDGRRVPRRSLAPGACYFERSFATHPWVIEHSDSNHYG--NRSLHAGGQQEEKRESTGSGAPAPLQPSPPREAGDDD-DAELCVVRLGDAMALAQFTGSLIWNPTGRTLSITKQARVGVPGMSAAARAAVGAGVEDGGGLDPGMKRQCMAGQRREAEEARARAARAVVREEKARVLEEMKAWRTHPLGGGGLGAGGGVAEGLGGKLGQGVPNLRVVMMGLSGWSE 918          
BLAST of mRNA_E_fasciculatus_S2_contig8592.16713.1 vs. uniprot
Match: A0A6H5JVY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVY5_9PHAE)

HSP 1 Score: 1441 bits (3731), Expect = 0.000e+0
Identity = 762/936 (81.41%), Postives = 791/936 (84.51%), Query Frame = 0
Query:   29 QTTRTHHTPTTPSDVGHLLPPIGGRKTRRDDSGGSLPPVPPYVEPSLPRPAPVDRNRSGLYDPALDPSPIGKEERGRVQPVRISRIVPRQDSGLGAQELQGAARSAEGPPIPTVVTVLNGYRTQHRRDRTSAPGGDLTSAADVLSEDEESCIDVFVEGFSRGIDHETLLPSEMFCRALQNGSQGPPKSSSLISEDSRHLLDVREGYLGLTVLLARTSEWSGTVDGDVQGEKQDERIEPGIGDESDRDSEEFAAETAITRTIFQREDGTPAPSRNAFRVQFEPGPLGVELEEYPGERGIVRVRRVLQAGQAELDGRLSAGCLIVAVGGWDKSSPNSTLRPNTAAGAGAGVVALDGVDIYGNLDVPALRSSAMDGGSGAKAHKSAIIRSLVDFEEAVSCREPDRLFVLWALDRHAPEAVAALGPPQANGVSTVPRGWSPASLYARRSNEGGGRGRGAFPPGSERQRKFEASKSPKSQRPEDTAVPEGAPGWETATNLARGRDSLGYSLSSDGPNMTSFAXXXXXXXXXXXXXXXXXXXPEADLAMSAFGSPKEVTGSEILTAGIDRLGWPSREGEGGAQRFGEGGARSAKGWEFETGGGIFDDDDQGLAARKHPARSQATLAPAAAPADETEEKPPTFPLGLESSAVDDIAVFIWFCNNHESAVMKV------------------------------------------SWIDYDGRRVPRRSLAPGACYFERSFATHPWVIQHSDSNQHGGSDESLHAGGQQEEECESSGRGAPAPLHPFPPREAGDDDXDEEFCVVRLGDAMALAQFTGSLIWNPTGRTLSITKQARVGVPGMSAAARAAVGAGVEDGGGLNPGMKRLCMAGQRREAEEARARAARAVVREEKARILEEMRAWRTHPLGGGGLGAGGXXXXXXXXKLGQGVPNLRVVMMGSSGWSE 922
            QT RTHHTPTTPSDVGHLLPPIGGRK RRD SG SLPP+PP VEPSLP PAPVDRNRSGLYDPALDPSPIGKEERG+VQPVRISR+VPRQDSGLGAQELQG ARSAEG PIPTVVTVLNGY TQHRRDRTSAP GD  SA  VLSEDEESCIDVFVEGFSRG+DHETLLPSEMFCRALQ+GSQGPPK SSLISEDSRH LDVREGYLGLTV LARTSEWSGT+DG VQGEKQDE IEPGIGD         AAE AITR IFQREDGTPAPSRNAFRVQFEPGPLGVELEEYPG+RGIVRVRRVLQAGQAELDGRLSAGCLIVAVGGWD+SS N TLRP+TA+GAG G V LDGVDIYGNLDVPALRSSAMDGGSGA+AHKSAIIRSL DFEEAVSCREPDRLFVLWALDRHAPEAVAALGPPQANGV TVPRGWSPAS+Y+RR NEG GR RG FP GSERQR FEASKSPKSQ  E++  PEGA G ET T LAR RDSL YSLSSD P + SFA                   PEADLAMSAFGSPKEVTGSE L AGI+RLGWPSREG+GGA RFGEGGAR+A GWEFETGGGIFDDDDQGLAARKHPAR QATLAPAA PADE EEKPPTFPLGLESSAVDD+AVFIWFCNNHESAVMKV                                          SWIDYDGRRVPRRSLAPGACYFERSFATHPWVIQHSDSNQ G +D SLHAGGQQEE+CE +G GAP PL P PPREAGDDD D E CVVRLGD MA+AQFTGSLIWNPTGRTLSITKQARVGVPGMSAAARAAVGAGVE+GGGL+PGMKRLCMAGQRREAEEARARAARAVVREEKAR+LEE++AWRTHPLGGGGLGAGG        KLGQGVPNLRVVMMGS GWSE
Sbjct:   23 QTKRTHHTPTTPSDVGHLLPPIGGRKPRRDGSGSSLPPIPPCVEPSLPCPAPVDRNRSGLYDPALDPSPIGKEERGKVQPVRISRVVPRQDSGLGAQELQGEARSAEGLPIPTVVTVLNGYNTQHRRDRTSAPAGDYASATHVLSEDEESCIDVFVEGFSRGVDHETLLPSEMFCRALQHGSQGPPKPSSLISEDSRHYLDVREGYLGLTVFLARTSEWSGTIDGGVQGEKQDECIEPGIGDGK------LAAEMAITRMIFQREDGTPAPSRNAFRVQFEPGPLGVELEEYPGDRGIVRVRRVLQAGQAELDGRLSAGCLIVAVGGWDESSANGTLRPSTASGAGTGHVVLDGVDIYGNLDVPALRSSAMDGGSGAEAHKSAIIRSLADFEEAVSCREPDRLFVLWALDRHAPEAVAALGPPQANGVCTVPRGWSPASVYSRRRNEGRGRVRGTFPSGSERQRPFEASKSPKSQGYEESE-PEGALGRETTTILARSRDSLRYSLSSDRPKLASFARNQASHAAGGGQLQTGGGQPEADLAMSAFGSPKEVTGSERLAAGINRLGWPSREGKGGAPRFGEGGARNAIGWEFETGGGIFDDDDQGLAARKHPARRQATLAPAATPADEAEEKPPTFPLGLESSAVDDLAVFIWFCNNHESAVMKVEQPHEGVGNPVRGFGFCWEKEHFVLTPRDTHGVPLIQRWHVVSWIDYDGRRVPRRSLAPGACYFERSFATHPWVIQHSDSNQAGSNDRSLHAGGQQEEKCEPTGSGAPVPLKPSPPREAGDDD-DAELCVVRLGDTMAVAQFTGSLIWNPTGRTLSITKQARVGVPGMSAAARAAVGAGVEEGGGLDPGMKRLCMAGQRREAEEARARAARAVVREEKARVLEEIKAWRTHPLGGGGLGAGGGVAEGLGGKLGQGVPNLRVVMMGS-GWSE 949          
BLAST of mRNA_E_fasciculatus_S2_contig8592.16713.1 vs. uniprot
Match: A0A835ZGW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW3_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.120e-26
Identity = 174/704 (24.72%), Postives = 261/704 (37.07%), Query Frame = 0
Query:   66 PVPPYVEPSLPRPAPVDRNRSGLYDPALDPSPIGKEERGRVQPVRISRIVPRQDSGLGAQELQGAARSAEGPPIPTVVTVLNGYRTQHRRDRTSAPGGDLTSAADVLSEDEESCIDVFVEGFSRGIDHETLL--PSEMFCRALQNGSQGPPKSSSLISEDSRHLLDVREGYLGLTVLLARTSEWSGTVDGDVQGEKQDERIEPGIGDESDRDSEEFAAETAITRTIFQREDGTPAPSRNAFRVQFEPGPLGVELEEYPGERGIV--------------------RVRRVLQAGQAELDGRLSAGCLIVAVGGWDKSSPNSTLRPNTAAGAGAGVVALDGVDIYGNLDVPALRSSAMDGGSGAKAHKSAIIRSLVDFEEAVSCREPDRLFVLWALDRHAPEAVAALGPPQANGVSTVPRGWSPASLYARRSNEGGGRGRGAFPPGSERQRKFEASKSPKSQRPEDTAVPEGAPGWETATNLARGRDSLGYSLSSDGPNMTSFAXXXXXXXXXXXXXXXXXXXPEADLAMSAFGSPKEVTGSEILTAGIDRLGWPSREGEGGAQRFGEGGARSAKGWEFETGGGIFD--------------------DDDQGLAARKHPARSQATLAPAAAPADETEEKPPTFPLGLESSAVDDIAVFIWFCNNHESAVMKVSWIDYDGRRVPRRSLAPGACYFERSFATHPWVIQ 727
            P P  V+ +LP P P  R ++G    A   SP+G ++RG    V++++  P+++S       + AA         TVVT +N +        + A G D  S    +   +        E + +G D E+ +  P E   R ++N +      +   +  + +L   R G         R     G++     G      I       +   +++      ++  +F  EDGT    R+ +RV F  GP+G+EL+     RG+V                    + R VL+ GQA  +GR+ AG LI+A GGW  S                                             A+     ++RSL DFE     R+PD    ++ LD  +PEAV A               W   +L+     EGG R        ++RQR  EA  +  S R  D+ +             AR RD +    S DG                               A SA G    V+            G     G+G  +   E  A    GW F TGGGI +                    DDD  +AAR    RS+  +  ++           + PL + +S  D   VF+ F N H +  ++V W+DY G+ VPRR L PG  YFERSFA+HPW++Q
Sbjct:   39 PAPKPVQRTLPLPPPNARRKAGGGG-ADAASPLGVQQRGDAPQVQLAQ--PQRESATAEAAQEAAA---------TVVTFINAHGESAGAGPSEASGQDSHSGLSGMGAFD-------AEIYWKGKDFESFILGPQESTYRCIRNAAAAARNGAFPANFKAVNLNFNRAGTGAAAATTVRDGGEVGSLSAMTGG------ITAAAVWATGSSAQQLEQRGGLSG-LFPSEDGTIPIPRSVYRVDFAAGPMGMELQ-CDAHRGLVSQCLMPTYLPVLLLIVIGRTQQRGVLRGGQAAANGRVRAGHLILAAGGWRAS---------------------------------------------ARPANRVVVRSLADFEGIAVGRDPDVPLSIFFLDPDSPEAVQAF--------------WEEDALHC----EGGYR--------AQRQRSAEAVAA--SMRRADSMI---------VRRHARARDIM---RSDDGS------------------------------AASAGGCDSSVSXXXXXDG---NCGSXEAXGDGFNEEHEED-AEQGNGWGFATGGGILESHDAVLSPPPRDAPAGDIDSDDDGQVAARVR--RSEGAVPASSQSPXXXXXXXLSLPLSMGASKADVAPVFLCFSNAHATMKLRVGWLDYGGQNVPRRVLLPGQTYFERSFASHPWLLQ 594          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8592.16713.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G7E5_ECTSI0.000e+086.88VHL domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JVY5_9PHAE0.000e+081.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZGW3_9STRA2.120e-2624.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 850..871
IPR024053von Hippel-Lindau disease tumour suppressor, beta domainPFAMPF01847VHLcoord: 674..732
e-value: 2.1E-6
score: 27.6
IPR037140von Hippel-Lindau disease tumour suppressor, beta domain superfamilyGENE3D2.60.40.780coord: 661..740
e-value: 1.0E-11
score: 46.8
IPR036208VHL superfamilySUPERFAMILY49468VHLcoord: 670..732
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 305..357

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8592contigE_fasciculatus_S2_contig8592:2247..5777 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8592.16713.1mRNA_E_fasciculatus_S2_contig8592.16713.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8592 2247..5777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8592.16713.1 ID=prot_E_fasciculatus_S2_contig8592.16713.1|Name=mRNA_E_fasciculatus_S2_contig8592.16713.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=923bp
MENLLPVVAGIDVTSNHFRETSLPYQQWQTTRTHHTPTTPSDVGHLLPPI
GGRKTRRDDSGGSLPPVPPYVEPSLPRPAPVDRNRSGLYDPALDPSPIGK
EERGRVQPVRISRIVPRQDSGLGAQELQGAARSAEGPPIPTVVTVLNGYR
TQHRRDRTSAPGGDLTSAADVLSEDEESCIDVFVEGFSRGIDHETLLPSE
MFCRALQNGSQGPPKSSSLISEDSRHLLDVREGYLGLTVLLARTSEWSGT
VDGDVQGEKQDERIEPGIGDESDRDSEEFAAETAITRTIFQREDGTPAPS
RNAFRVQFEPGPLGVELEEYPGERGIVRVRRVLQAGQAELDGRLSAGCLI
VAVGGWDKSSPNSTLRPNTAAGAGAGVVALDGVDIYGNLDVPALRSSAMD
GGSGAKAHKSAIIRSLVDFEEAVSCREPDRLFVLWALDRHAPEAVAALGP
PQANGVSTVPRGWSPASLYARRSNEGGGRGRGAFPPGSERQRKFEASKSP
KSQRPEDTAVPEGAPGWETATNLARGRDSLGYSLSSDGPNMTSFARNQAS
NAAGGGQLQAGGGQPEADLAMSAFGSPKEVTGSEILTAGIDRLGWPSREG
EGGAQRFGEGGARSAKGWEFETGGGIFDDDDQGLAARKHPARSQATLAPA
AAPADETEEKPPTFPLGLESSAVDDIAVFIWFCNNHESAVMKVSWIDYDG
RRVPRRSLAPGACYFERSFATHPWVIQHSDSNQHGGSDESLHAGGQQEEE
CESSGRGAPAPLHPFPPREAGDDDDDEEFCVVRLGDAMALAQFTGSLIWN
PTGRTLSITKQARVGVPGMSAAARAAVGAGVEDGGGLNPGMKRLCMAGQR
REAEEARARAARAVVREEKARILEEMRAWRTHPLGGGGLGAGGGVAGGLG
GKLGQGVPNLRVVMMGSSGWSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf
IPR036208VHL_sf
IPR037140VHL_beta_dom_sf
IPR024053VHL_beta_dom