prot_E_fasciculatus_S2_contig8570.16697.1 (polypeptide) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8570.16697.1 vs. uniprot
Match: A0A6H5JKX1_9PHAE (RNB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKX1_9PHAE) HSP 1 Score: 804 bits (2077), Expect = 5.000e-284 Identity = 457/553 (82.64%), Postives = 475/553 (85.90%), Query Frame = 0
Query: 1 MTAENGQSSSSGKGANSNQLRLLPGTVVLQPGDPIEFWHAQGLVLGNYESPVPGRQSLVVRTEAGEPLTIDAGQIVGVWREDEMTGRLPLGSVTGAGGADGDE------SXXXXXXXASVVAGWVEVREETRALLQGTPARGLDLGAFWRAASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPFRFRSPGETFRPSAVERAAAAQVLAGERSRFKRVVSKRLGQAGVSPGGGSXXXXXXXXXXXTGVGAEGEVLPADVGDGAVGIREEGGREGTVDAQGRSERKIEEXXXXXXXXXLREPVLISVGGFKAMDQSVAVTREVADFCRVVGEVKRAAAAAAEGVAAGYGDAAAAEEGGAGSALARAGLFEPAFLLILHSLEAFAIGGDEQSLIPEAKRVMVEITGKANPTAAKSILVDVGLWTSRRQREEEEGGRPGEEGGEAGRDEAGEEGGVIPWSAEALAAAAALGGERARRGANYGKRRPLEEVGAPAPFGRHIMNEKHRHDFRGASFGVYCIDGAGTSFLDDAFSVDPETREVFIHITDVQGMVPTG 547
MTAEN QSSS+G NQLRLLPGTV+LQPGDPIEFWHAQGLVLGNYESPVPGRQSL+VRTEAGEPLTIDAGQIVGVWREDEM+G LPLG VT GADGD+ S XXXXXA+VVAGW EVRE+ RALLQG PARGLD+GAFWRAASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPF+FRSPGE FRPSAVERAAAAQVLAGERSRFKRVVSKRLG AGVSP G G GAEGEVL ADVGDGAVG+R GGR GTV+AQ R ERK EE L +PVLISVGGFKA+DQSVAVTREVADFCRVVGEVKRAAAA GVAAGYGDAAAAEEGGAGSALARA LFEPAFLLILHSLEAFAIGGDEQSLIPEAKRVMV+ITGKAN TAAK ILVDVGLWTSRRQ EE GG+PGEE GE GRDEAGEEGGVIPWSAEAL AA ALGGERARR NYGKRRPLEEVGAPAPFGRH++ HDFRGASFGVYCIDGAGT FLDDAFSVDPETREVFIHITDVQG+VPTG
Sbjct: 1 MTAENDQSSSTGN----NQLRLLPGTVILQPGDPIEFWHAQGLVLGNYESPVPGRQSLLVRTEAGEPLTIDAGQIVGVWREDEMSGHLPLGRVTA--GADGDDGGDXXSSAAXXXXXAAVVAGWAEVREKIRALLQGMPARGLDVGAFWRAASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPFQFRSPGEAFRPSAVERAAAAQVLAGERSRFKRVVSKRLGPAGVSPDGRGGRRKQRARGAGKGGGAEGEVLVADVGDGAVGVRGGGGRGGTVNAQCRDERKQEEEED------LSQPVLISVGGFKAVDQSVAVTREVADFCRVVGEVKRAAAA---GVAAGYGDAAAAEEGGAGSALARARLFEPAFLLILHSLEAFAIGGDEQSLIPEAKRVMVDITGKANSTAAKCILVDVGLWTSRRQPEEG-GGKPGEEVGEVGRDEAGEEGGVIPWSAEALEAATALGGERARRRVNYGKRRPLEEVGAPAPFGRHVL-----HDFRGASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTG 532
BLAST of mRNA_E_fasciculatus_S2_contig8570.16697.1 vs. uniprot
Match: A0A835Z4W4_9STRA (RNB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W4_9STRA) HSP 1 Score: 106 bits (265), Expect = 2.600e-20 Identity = 131/492 (26.63%), Postives = 180/492 (36.59%), Query Frame = 0
Query: 118 WVEVREETRALLQGTPARGLDLGAFWRAASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPFRFRSPG---------------ETFRPSAVERAAAAQVLAGERSRFKRVVSKRLGQAGVSPGGGSXXXXXXXXXXXTGVGAEGEVLPADVGDGAVGIREEGGREGTVDAQGRSERKIEEXXXXXXXXXLREPVL-ISVGGFKAMDQSVAVTREVADFCRVVGEVKRAAAAAAEGVAAGYGDAAAAEEGGAGSALARAG----------------------------LFEPAFLLILHSLEAFAIGGDEQSLIPEAKRVMVEITGKANPTAAKSILVDVGLWTSRRQREEEEGGRPGEEGGEAGRDEAGEEGGV---------------IPWSAEALAAAAALGGERARRGANYGK---RRPLEEVGAPAPFGRHIMNEKHRHDFRGASFGVYCIDGAGTSFLDDAFSVDPETREVFIHITDVQGMVPTG 547
W +++E R LL P R LDL W+ A +GKG V++ A +LFG + + G + F+ S + PSA ER AA VLA + RFKRV VL +PV+ + GGFK +DQSV T + F +V + A A A DAAAA +A L + + I+HSLE A+GG L+P+AK + ++ + AA ++LV +G WT R ++ G A +PWSAEAL AAA + R RR A Y + P +GAP P GR D+RGA+F VYC+D +F DDA S DP+ RE+ IH+ D Q +V G
Sbjct: 12 WPLLQQEARRLLSRMPPRSLDLHDLWKLARGKGKGVVLSTCDVARWLFGGGA-RRGGKQHAQSFQLTSQQGHASSDFELQQQQQQPVWAPSAAERVAAGLVLAADLQRFKRVPC---------------------------------VLRHS-----------------------------------------DPVVSVCEGGFKPVDQSVVATNQAMSFATMVKDQFSTAQPPAPASDA-TSDAAAAXXPAPKVPAPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLSDASRRQIVHSLEMLALGGSADGLLPQAKAALRQMGHEPTAAAAHAVLVQMGAWTERARKPS---------AGTAXXXXXXXXXXXXXXXXXXXXXXXXXXVPWSAEALRAAADVAALRRRREAQYARGPLAAPRTPLGAPLPNGR--------RDYRGAAFSVYCVDAPSANFYDDAVSWDPDARELLIHVVDAQLLVEDG 410
BLAST of mRNA_E_fasciculatus_S2_contig8570.16697.1 vs. uniprot
Match: A0A0M0LQR4_9EUKA (Weakly cyanobacterial exoribonuclease (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LQR4_9EUKA) HSP 1 Score: 66.2 bits (160), Expect = 6.380e-8 Identity = 56/202 (27.72%), Postives = 80/202 (39.60%), Query Frame = 0
Query: 28 VLQPGDPIEFWHAQGLVLGNYESPVPGRQSLVVRTEAGEPLTIDAGQIVGVWREDEMTGRLPLGSVTGAGGADGDESXXXXXXXASVVAGWVEVREETRALLQGTPARGLDLGAFWRAASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPFRFRSP---GETFRPSAVERAAAAQVLAGERSRFKRVVSKRLGQAGVSP 226
+L G +E WH GL +GN+ S G +L+V +G + +D GQ+V VW D P GW ++ E LL P LDL W+ + A A E + + +L F SP G + R V+R AA Q+LA ER+ FKRV + +G +P
Sbjct: 54 LLCSGAAVELWHEGGLAVGNFRSRAEGSNALIVELSSGRSIKVDGGQLVDVWAADAGYPSTP--------------------------DGWTSLQAEAAGLLAELPPHMLDLRPLWQR-------LLTEKAAARERVDSSRVAQEL---------FTSPHRQGPSARQRLVQRLAAGQLLAAERTLFKRVPIELAQWSGDAP 213 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8570.16697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E_fasciculatus_S2_contig8570.16697.1 ID=prot_E_fasciculatus_S2_contig8570.16697.1|Name=mRNA_E_fasciculatus_S2_contig8570.16697.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=547bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|