mRNA_E_fasciculatus_S2_contig8558.16684.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8558.16684.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK29_ECTSI) HSP 1 Score: 446 bits (1148), Expect = 7.830e-149 Identity = 272/385 (70.65%), Postives = 288/385 (74.81%), Query Frame = 1
Query: 190 MAIPFFRSGDDDDDALSRWSHLNHKVEEYRQDLVTAVQSLDMIINTLESAAAPKANARAGDMPGEGMRRLAAKLRRKLNMMPPRWQVNADVLTCLLRPVPFVAGLPVPSPPRPPTPPATSNYDTDQDT----GGPVGKGIEYDSSDAIDIADADGDVSDAGGGKEGDARTKQHEAVRVDRGDDATGESFSAGSAGPA---------------AAEERRAMPVPIFQGMGGGDXXXXXXXXXDGKAGSKKRTGFHSYDDTHQIFTHILRDWTSEGDSVRAAVYAPLLQALDDHFGWQE--DGTAARHSAGGRDDSYCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPACGRTANVLVPGAGLGRLAAEVAARGYASVHANELSTT 1281
MAIPFFRSG+DDD ALSRWSHLNHKVEEY+QDLV AVQSLDMII TLESAAAPKAN RAGDMPGEGMRRLAAKLRRKLN MPPRWQVNADVL+ LLRPVPFVAGLPVP PPRPP PPATS YD+DQDT PVGK E DSS ID+ ADGDVSDAGGGKEG ARTKQ +A RV G DATGE FSAGS AAEERRA+PVPIFQG+G GDXXXXXXXX KAGSK RTGFHSYD+THQIFTHILRDWTSEGDSVRAAVY+PLL+ALDD FG QE T+ R ++ G D+ PACGRTANVLVPGAGLGRLA E+AARGYASVHANELSTT
Sbjct: 1 MAIPFFRSGNDDD-ALSRWSHLNHKVEEYKQDLVKAVQSLDMIITTLESAAAPKANVRAGDMPGEGMRRLAAKLRRKLNKMPPRWQVNADVLSWLLRPVPFVAGLPVPDPPRPPIPPATSKYDSDQDTTIDTSRPVGKDREDDSSTGIDVV-ADGDVSDAGGGKEGVARTKQQQAGRVAPGGDATGEDFSAGSXXXXXXXXXXXXXXXXXXXAAEERRAIPVPIFQGVGNGDXXXXXXXX---KAGSKTRTGFHSYDETHQIFTHILRDWTSEGDSVRAAVYSPLLKALDDRFGRQEAASSTSGRGNSDGLSDT----------DGDRGGGSRCGAQAGPPPATTPPACGRTANVLVPGAGLGRLATEIAARGYASVHANELSTT 370
BLAST of mRNA_E_fasciculatus_S2_contig8558.16684.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII3_9PHAE) HSP 1 Score: 367 bits (941), Expect = 1.470e-118 Identity = 214/306 (69.93%), Postives = 228/306 (74.51%), Query Frame = 1
Query: 916 IFTHILRDWTSEGDSVRAAVYAPLLQALDDHFGWQEDGTAARHSAGGRDDSYCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPACGRTANVLVPGAGLGRLAAEVAARGYASVHANELSTTMLSSCYWLMEALRGADFTGTAATPTSPLTRVGRKQHENGDASPSSXXXXXXXXXVPGRDD--VGDCGLGADEDGGTTHGEAGGGREGGGGPVASGKGFFKFYPFLNDATHNEMDGEARFRSVLFPDPEGRALLARASGRLSFQAGEFSETYGGVGGPYEAAFDAVVTSFFVDTAPNVVQYVATI 1827
IFTHILRDWTSEG +VRAAVY+PLL+ALDD F QE + SAGGR DSY +G PACGRTANVLVPGAGLGRLA E+AARGYASVHANELSTTMLSSCYWLMEALR ADFTGT TPTSPL R R+QH+ +S + XXXXX V RDD VGD GLGADED T +A GREGGGG KGF +FYPFLNDATHNEMDGEARFRSVLFPDPEGRALLA+ASGRLSFQAGEFSETYGGVGGPYE AFDAVVTSFFVDTAPNVVQ A +
Sbjct: 2 IFTHILRDWTSEGAAVRAAVYSPLLKALDDRFSRQEGAS----SAGGRGDSYSNGDGLSDTDGDRGGGGRCGGQADPPPATTPPACGRTANVLVPGAGLGRLATEIAARGYASVHANELSTTMLSSCYWLMEALRRADFTGTP-TPTSPLPRASREQHDASLSSSTPXXXXXAVCCVSDRDDDVVGDFGLGADEDEPATENDAEEGREGGGG-----KGFLEFYPFLNDATHNEMDGEARFRSVLFPDPEGRALLAQASGRLSFQAGEFSETYGGVGGPYEGAFDAVVTSFFVDTAPNVVQVRAAV 297
BLAST of mRNA_E_fasciculatus_S2_contig8558.16684.1 vs.
Match: N2227-like (protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIS5_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.880e-31 Identity = 151/401 (37.66%), Postives = 193/401 (48.13%), Query Frame = 1
Query: 898 YDDTHQIFTHILRDWTSEGDSVRAAVYAPLLQALDDHFGWQEDGTAARHSAGGRDDSYCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPACGRTANVLVPGAGLGRLAAEVAARGYASVHANELSTTMLSSCYWLME-ALR-----GADFTGTAATPTSPLTRVGRKQHENGDASPSSXXXXXXXXXVPGRDDVGDCGLGADEDGGTTHGEAGGGREGGGGPVASGKGFFKFYPFLNDATHNEMDGEARFRSVLFPDPEGRALLARASGRLSFQAGEFSETYG----GVGGPYE----AAFDAVVTSFFVDTAPNVVQYVATIRRALRPGGVWINCGPLHWHNHSALALSLDEMLVLVEGSGFRLEEGVLFGVRAGQRSGVDVRRLARPSTCGQPRGALL 2058
YDD + + H++RDW+ +G + RAA AP+L L ++ + T XXXXXXXXXXXXXXXXXXXXX +LVPGAGLGRLA E+AARG+ V ANE S M ++ + ++ ALR GAD XXXXXXXXX GG T YP+L+DA H+ + EARFR+V FPD GRA RA RLS+ G+F E YG G G AFD VVT FF+DTAP+V++YVA + ALR GGVW+N GPLH+H S + S DE+ ++ +GF + +RA Q + RR ST + LL
Sbjct: 166 YDDAYAVLCHVVRDWSDDGAAARAAALAPILACLREYLPLPQCATXXXXXX-----------------XXXXXXXXXXXXXXXXXXXXXXXXXXVPLILVPGAGLGRLAVELAARGW-RVRANERSACMCAAAHAIIGGALRDCRGGGADADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIT-----------------------VYPYLHDAPHDCVRSEARFRAVAFPDAAGRAAARRARRRLSWDCGDFLELYGPRRRGRSGSXXXXXXGAFDGVVTCFFLDTAPDVLEYVAALTHALRRGGVWVNLGPLHFHRESRVVASADELTAVLREAGFEV-------LRAAQLPPCEYRRGEPDSTATEQFRPLL 518
BLAST of mRNA_E_fasciculatus_S2_contig8558.16684.1 vs.
Match: Uncharacterized (protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPV2_FISSO) HSP 1 Score: 107 bits (266), Expect = 4.930e-21 Identity = 98/361 (27.15%), Postives = 136/361 (37.67%), Query Frame = 1
Query: 880 RTGFHSYDDTHQIFTHILRDWTSEGDSVRAAVYAPLLQALDDHFGWQEDGTAARHSAGGRDDSYCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPACGRTANVLVPGAGLGRLAAEVAARGYASVHANELSTTMLSSCYWLMEALRGADFTGTAATPTSPLTRVGRKQHENGDASPSSXXXXXXXXXVPGRDDVGDCGLGADEDGGTTHGEAGGGREGGGGPVASGKGFFKFYPFLNDATHNEMDGEARFRSVLFPDPEGRALLARASGRLSFQAGEFSETYGGVGGPYEAAFDAVVTSFFVDTAPNVVQYVATIRRALRP-GGVWINCGPLHWHNHSALALSLDEMLVLVEGSGFRLEE 1959
RT HSYDD HQ+ HI+RDWT+EG +R +Y L +D +G R ++VPGAG+GRLA E+A +A V A E S G AA S L R KQ SG +P+ +D NE++ R+ V +PD + L+ G LS+ +F G V ++ FD VVT FF+DTA NV++Y+ I + LRP GG+W+N GPL WH S + S DE+ ++E GF++ E
Sbjct: 167 RTADHSYDDPHQVVAHIVRDWTAEGKQIRRQLYDWCLSKID--------------KSGLR-------------------------------------------IMVPGAGMGRLAWELARNKHAWVEALESSV-------------------GMAAAAASILQR---KQ--------------------------------------------------------SGM----IHPYSSDQLSNEVNSSQRYLRVQYPDVDD---LSTKQGHLSYTVADFLSLNGVVNN--QSKFDVVVTCFFLDTASNVLEYITMITKLLRPKGGMWVNVGPLQWHQKSQIRFSADELYNIIEEVGFQIME 383
BLAST of mRNA_E_fasciculatus_S2_contig8558.16684.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YZ25_9STRA) HSP 1 Score: 108 bits (269), Expect = 5.930e-21 Identity = 106/371 (28.57%), Postives = 138/371 (37.20%), Query Frame = 1
Query: 856 DGKAGSKKRTGFHSYDDTHQIFTHILRDWTSEGDSVRAAVYAPLLQALDDHFGWQEDGTAARHSAGGRDDSYCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPACGRTANVLVPGAGLGRLAAEVA-ARGYASV-HANELSTTMLSSCYWLMEALRGADFTGTAATPTSPLTRVGRKQHENGDASPSSXXXXXXXXXVPGRDDVGDCGLGADEDGGTTHGEAGGGREGGGGPVASGKGFFKFYPFLNDATHNEMDGEARFRSVLFPDPEGRALLARASGRLSFQAGEFSETYGGVGGPYEAAFDAVVTSFFVDTAPNVVQYVATIRRALRP---GGVWINCGPLHWHNHSALALSLDEMLVLVEGSGFRL 1953
DG SK+ G YD Q+ TH+ RDWT G R LL+ L W E+ + + GG D S +LVPGAGLGRLA ++A A G V AN+ S M + A + + + + K + D SS TT YPF+ D NE+D RF SV+FPD R LS+ G+F TY FDA+ TSFFVDTA NV +YVA ++ LR G VWIN GP+ WH + L ++DE ++ SGF L
Sbjct: 206 DGDINSKESEG---YDSALQVITHVARDWTDGGHQCRQMTNGWLLKEL---LSWHENTFKRKINGGGVDQDGIS-------------------------------------ILVPGAGLGRLAFDIATATGLKGVVEANDSSAIMAVA----------------ARSMLANVLAMNDKSDNDSDKKTSSL---------------------------TT-----------------------IYPFVLDPKTNEVDSRLRFDSVVFPDDLAIEAARRTLPNLSYTVGDFIATYSSPA--KRGKFDAIATSFFVDTAANVYEYVAIMKHLLRSSPEGSVWINVGPIQWHPCALLRPTVDEFRDILTASGFEL 465
BLAST of mRNA_E_fasciculatus_S2_contig8558.16684.1 vs.
Match: Uncharacterized (protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JBY6_FISSO) HSP 1 Score: 105 bits (263), Expect = 1.180e-20 Identity = 98/357 (27.45%), Postives = 134/357 (37.54%), Query Frame = 1
Query: 892 HSYDDTHQIFTHILRDWTSEGDSVRAAVYAPLLQALDDHFGWQEDGTAARHSAGGRDDSYCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPACGRTANVLVPGAGLGRLAAEVAARGYASVHANELSTTMLSSCYWLMEALRGADFTGTAATPTSPLTRVGRKQHENGDASPSSXXXXXXXXXVPGRDDVGDCGLGADEDGGTTHGEAGGGREGGGGPVASGKGFFKFYPFLNDATHNEMDGEARFRSVLFPDPEGRALLARASGRLSFQAGEFSETYGGVGGPYEAAFDAVVTSFFVDTAPNVVQYVATIRRALRP-GGVWINCGPLHWHNHSALALSLDEMLVLVEGSGFRLEE 1959
HSYDD HQ+ HI+RDWT+EG +R +Y L +D P +LVPGAG+GRLA E+A +A V A E S G AA S L R KQ SG +PF +D NE++ R+ V +PD + + G LS+ +F + V G ++ DAVVT FF+DTA NV++Y+A I + L+P GG+W+N GPL WH S + LS DE+ L+E GF++ E
Sbjct: 169 HSYDDPHQVVAHIVRDWTAEGKQIRRQLYDWCLSKID-----------------------------------------------------KPGL----RILVPGAGMGRLAWELARNKHAWVEALESSV-------------------GMAAAAASILQR---KQ--------------------------------------------------------SGM----IHPFSSDQFSNEVNSSHRYLRVQYPDVDDVEIF---EGHLSYTVADFL-SLNSVLGNNQSQLDAVVTCFFLDTATNVLEYIAMITKLLKPKGGMWVNVGPLQWHQKSLIRLSADELYSLIEEVGFKIME 382
BLAST of mRNA_E_fasciculatus_S2_contig8558.16684.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WRG4_9CHLO) HSP 1 Score: 97.8 bits (242), Expect = 4.630e-19 Identity = 56/137 (40.88%), Postives = 80/137 (58.39%), Query Frame = 1
Query: 1570 FKFYPFLNDATHNEMDGEARFRSVLFPDPEGRALLARASGRLSFQAGEFSETYGGVGGPYEAAFDAVVTSFFVDTAPNVVQYVATIRRALRPGGVWINCGPL--HWHNHS-----ALALSLDEMLVLVEGSGFRLEE 1959
+ +P++ AT N++ E + R V PD +++ + G LS AG+F E YG +DAVVT FF+DTA NVVQY+ I AL+PGGVW+N GPL HW S ++ LSL E+ + + GFRL++
Sbjct: 55 YTIHPWVT-ATCNQLSDEEQLRGVTIPDVHPASIVTQG-GLLSMAAGDFVEVYGSA--EQAGQWDAVVTCFFIDTAHNVVQYLEVIHNALKPGGVWVNLGPLLYHWAESSGVDELSVELSLGEIRRVAQAMGFRLDQ 187
BLAST of mRNA_E_fasciculatus_S2_contig8558.16684.1 vs.
Match: Uncharacterized (protein n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9ZIR7_9FUNG) HSP 1 Score: 89.7 bits (221), Expect = 1.070e-17 Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = 1
Query: 1612 MDGEARFRSVLFPDPEGRALLARASGRLSFQAGEFSETYGGVGGPYEAAFDAVVTSFFVDTAPNVVQYVATIRRALRPGGVWINCGPLHWH-----NHSALALSLDEMLVLVEGSGFRLE 1956
M E + RSV PD LL+ G S +G+F ETY G + +A+V+ FF+DTA N + Y+ TI AL+PGG+WIN GPL WH N ++ L+ DE++++++ GF ++
Sbjct: 1 MSSEDQLRSVKVPDVAPVELLSSIQGNFSMTSGDFVETYQNDTGNW----NAIVSCFFLDTANNPLTYLETIYNALKPGGIWINIGPLLWHFENDPNKVSIELTFDELILIIKKIGFTID 116
BLAST of mRNA_E_fasciculatus_S2_contig8558.16684.1 vs.
Match: N2227-domain-containing (protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHI5_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.070e-17 Identity = 63/169 (37.28%), Postives = 88/169 (52.07%), Query Frame = 1
Query: 1579 YPFLNDATHNEMDGEARFRSVLFPDPEGRALLARASGRLSFQAGEF-SETYGGVGGPYEAAFDAVVTSFFVDTAPNVVQYVATIRRALRPG-GVWINCGPLHWHNHSALALSLDEMLVLVEGSGFRLEEGVLFGVRAGQRSGVDVRRLARPSTCGQPRGALLAFVCERS 2079
+P++ DA NE+D + RF SV FPD + G LS+ G F E FDAVVT FF+DTA N+ +Y+ TI++ L+P GVWIN GP+ WHN++ L S+DE+ L+E G+ + + R D AR ++ R L FV RS
Sbjct: 335 HPYVLDAMSNEVDSKRRFGSVSFPDTSINGIFD-VRGSLSYTVGSFVGENDDYYQRQRAGHFDAVVTCFFIDTATNIYEYLDTIKKLLKPETGVWINVGPVQWHNNAVLRPSVDELRDLIESYGWSIRVWSIDNTAIPYRDESDAHVAARTTSYEGYRP--LRFVAIRS 500
BLAST of mRNA_E_fasciculatus_S2_contig8558.16684.1 vs.
Match: N2227-domain-containing (protein n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316Z7L5_9BASI) HSP 1 Score: 96.7 bits (239), Expect = 2.070e-17 Identity = 98/365 (26.85%), Postives = 133/365 (36.44%), Query Frame = 1
Query: 874 KKRTGFHSYDDTHQIFTHILRDWTSEGDSVRAAVYAPLLQALDDHFGWQEDGTAARHSAGGRDDSYCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPACGRTA-NVLVPGAGLGRLAAEVAARGYASVHANELSTTMLSSCYWLMEALRGADFTGTAATPTSPLTRVGRKQHENGDASPSSXXXXXXXXXVPGRDDVGDCGLGADEDGGTTHGEAGGGREGGGGPVASGKGFFKFYPFLNDATHNEMDGEARFRSVLFPDPEGRALLARASGRLSFQAGEFSETYGGVGGPYEAAFDAVVTSFFVDTAPNVVQYVATIRRALRPGGVWINCGPLHWHNHS----ALALSLDEMLVLVEGSGFRL 1953
++R D ++RDW+ EG++ R A Y P+L ALD FG T A A R A VLVPGAGLGRLA EVA +GY S NE S ML + +W++ ++HE+ YP+++ ++ N + + V PD L S AGEF + Y AA+DAV T +FVDTA NVV+Y+ + L GG+WIN GPL WH + ++ L+L+EML LVE GF L
Sbjct: 197 RRRVADQDLDKIRSTIKQLVRDWSDEGNAEREAAYGPVLDALDARFG-----TIA-------------------------------------------AADRPAVRVLVPGAGLGRLAFEVAWQGY-SCQGNEYSFFMLLASHWILNK--------------------SARRHEH-----------------------------------------------------------TIYPYVHSSS-NWRSAQDLLQGVRIPDVNPSDLPPHVD--FSMVAGEFVDVYSKA--QEGAAWDAVATVYFVDTARNVVRYLEVLNHVLPVGGIWINAGPLLWHYENNGDLSIELTLEEMLGLVEQMGFEL 428 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8558.16684.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8558.16684.1 >prot_E_fasciculatus_S2_contig8558.16684.1 ID=prot_E_fasciculatus_S2_contig8558.16684.1|Name=mRNA_E_fasciculatus_S2_contig8558.16684.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=702bp MLLSSQRVVLLLTLVTTAVGVLLLCRNYQRAWQFQQQFQQHPGASGSSNGback to top mRNA from alignment at E_fasciculatus_S2_contig8558:675..5609+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8558.16684.1 ID=mRNA_E_fasciculatus_S2_contig8558.16684.1|Name=mRNA_E_fasciculatus_S2_contig8558.16684.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4935bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8558:675..5609+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8558:675..5609+ >mRNA_E_fasciculatus_S2_contig8558.16684.1 ID=mRNA_E_fasciculatus_S2_contig8558.16684.1|Name=mRNA_E_fasciculatus_S2_contig8558.16684.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2106bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8558:675..5609+ (Ectocarpus fasciculatus EfasUO2)back to top |