mRNA_E_fasciculatus_S2_contig8553.16681.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8553.16681.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9W6_9PHAE) HSP 1 Score: 615 bits (1587), Expect = 2.680e-222 Identity = 294/317 (92.74%), Postives = 304/317 (95.90%), Query Frame = 1
Query: 1 MWAPPVVDMESPEAPDVLAKACKDFGFFYVENHGVSKDMMREVFRQSKAFFSLGIDDKMAVKADRHNRGYTPMHEEILDPSKQVKGDTKEGYYIFRELPPPTDEEEDAARPLKGPNQWPSEDLVPGWRATMQRYFITMHAVGVRLSGLLSVGLGLDPSLFERCTSEMAHALRLLHYSAEVSDPGKGVMGAGAHSDYGLLTLLATDDVPGLQVKLDGEWLDVPPREGAFICNLGDMLQRWRVVTNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCFPQFCSEENPAKHPPVTAGRYLLQKYSQTHQDFDGNQQ 951
MW PPVVDMESPEAP VLAKACK+FGFFYVENHGVSKD+MREVFRQSKAFFSLGIDDKMA+KADRHNRG+TPMHEEILDPSKQVKGDTKEGYYIFRELP P+D EED ARPLKGPNQWPSEDLVPGWRATMQRYF TMHAVGVRLSGLLSVGLGLDPS FE CTSEMAHALRLLHYSAEVSDP KGVMGAGAHSDYGLLTLLATD+VPGLQV+L+GEWLDVPPREGAFICNLGDMLQRWRVVTNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVC PQ CSEENPAK+PPVTAG Y+L KYSQTHQDFDGNQQ
Sbjct: 1 MWEPPVVDMESPEAPKVLAKACKEFGFFYVENHGVSKDVMREVFRQSKAFFSLGIDDKMALKADRHNRGFTPMHEEILDPSKQVKGDTKEGYYIFRELPTPSDGEEDDARPLKGPNQWPSEDLVPGWRATMQRYFTTMHAVGVRLSGLLSVGLGLDPSFFESCTSEMAHALRLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQVRLNGEWLDVPPREGAFICNLGDMLQRWRVVTNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCLPQCCSEENPAKYPPVTAGSYILNKYSQTHQDFDGNQQ 317
BLAST of mRNA_E_fasciculatus_S2_contig8553.16681.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW9_ECTSI) HSP 1 Score: 525 bits (1351), Expect = 2.530e-186 Identity = 248/318 (77.99%), Postives = 280/318 (88.05%), Query Frame = 1
Query: 1 MWAPPVVDMESPEAPDVLAKACKDFGFFYVENHGVSKDMMREVFRQSKAFFSLGIDDKMAVKADRHNRGYTPMHEEILDPSKQVKGDTKEGYYIFRE--LPPPTDEEEDAARPLKGPNQWPSEDLVPGWRATMQRYFITMHAVGVRLSGLLSVGLGLDPSLFERCTSEMAHALRLLHYSAEVSDPGKGVMGAGAHSDYGLLTLLATDDVPGLQVKLDGEWLDVPPREGAFICNLGDMLQRWRVVTNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCFPQFCSEENPAKHPPVTAGRYLLQKYSQTHQDFDGNQ 948
MWAPPVVDM+S AP VLAKAC+DFGFFYVENHGVS+++MREVFRQSK FFSLG+DDKM+V+AD++NRGYTPMHE++LD Q KGDTKEGYYIFRE D E D ARPL GPNQWPSE+LVPGW+ TMQ +F+ MHAVG RL+GLLSVGLGLDP++F C SE AH LRLLHYSAEVSDPGKGVMGAGAH+D+GL+TLLATD+VPGLQV+L+G+WLD+PPR+GAFICNLGDMLQRW TND+LRSTVHRVVNKLG ERYSIPFFFE NFDTEV CFPQFCSEENPA++PPV AG YL+ KYSQTHQDFDG Q
Sbjct: 1 MWAPPVVDMDSSSAPAVLAKACRDFGFFYVENHGVSEEVMREVFRQSKLFFSLGMDDKMSVRADKNNRGYTPMHEQVLDLENQTKGDTKEGYYIFREGSAGAAADGEHDDARPLSGPNQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVFGTCFSEFAHTLRLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQVRLNGKWLDIPPRKGAFICNLGDMLQRW---TNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVACFPQFCSEENPARYPPVKAGAYLMGKYSQTHQDFDGYQ 315
BLAST of mRNA_E_fasciculatus_S2_contig8553.16681.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QM00_9CHLO) HSP 1 Score: 335 bits (860), Expect = 1.130e-111 Identity = 170/313 (54.31%), Postives = 216/313 (69.01%), Query Frame = 1
Query: 13 PVVDMESPEAPDV--LAKACKDFGFFYVENHGVSKDMMREVFRQSKAFFSLGIDDKMAVKADRHNRGYTPMHEEILDPSKQVKGDTKEGYYIFRELPPPTDEEEDAARPLKGPNQWPSEDLVPGWRATMQRYFITMHAVGVRLSGLLSVGLGLDPSLFERCTSEMAHALRLLHYSAEVSDPGKGVMGAGAHSDYGLLTLLATDDVPGLQVKLDGEWLDVPPREGAFICNLGDMLQRWRVVTNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCFPQFCSEENPAKHPPVTAGRYLLQKYSQTHQDFDGN 945
P+VD+ EA + AC GFFY NHG+ ++++ EVFRQ +A F++ + KMA+ AD +NRGYTP EE LDP++Q +GDTKEG+Y RE+ + + E+ PL GPNQWP E LVPG+R T+ YF + A+G+RL LL++ LGL P F + ALR LHY+AEVS PG+GV GAGAHSDYG+LTLLATD+VPGLQV L+G W +V P GAFI NLGDML+RW TN +ST+HRV+N G+ERYSIPFFFE NF +V C P SE PA +PP TAG +LL Y+QTH +D N
Sbjct: 10 PLVDLSQDEAAAAQQVYAACSGPGFFYAANHGIPQELLSEVFRQMRAAFAMPDEAKMAMLADENNRGYTPYAEETLDPAQQARGDTKEGFYFGREV---SADSEEGKLPLHGPNQWPPEQLVPGFRLTVTAYFDALAALGMRLLRLLALSLGLPPDYFAPHFTHPMVALRPLHYTAEVSAPGQGVFGAGAHSDYGMLTLLATDEVPGLQVHLNGSWQEVAPLPGAFIVNLGDMLERW---TNGLFKSTLHRVINTTGQERYSIPFFFEPNFTAKVECLPCCVSEARPAAYPPTTAGEHLLAMYAQTHAGYDVN 316
BLAST of mRNA_E_fasciculatus_S2_contig8553.16681.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WWS1_9CHLO) HSP 1 Score: 330 bits (847), Expect = 2.500e-109 Identity = 163/316 (51.58%), Postives = 214/316 (67.72%), Query Frame = 1
Query: 1 MWAPPVVDMESPE--APDVLAKACKDFGFFYVENHGVSKDMMREVFRQSKAFFSLGIDDKMAVKADRHNRGYTPMHEEILDPSKQVKGDTKEGYYIFRELPPPTDEEEDAARPLKGPNQWPSEDLVPGWRATMQRYFITMHAVGVRLSGLLSVGLGLDPSLFERCTSEMAHALRLLHYSAEVSDPGKGVMGAGAHSDYGLLTLLATDDVPGLQVKLDGEWLDVPPREGAFICNLGDMLQRWRVVTNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCFPQFCSEENPAKHPPVTAGRYLLQKYSQTHQDFDG 942
M A PV++M E A ++ AC GFFYVENHGV ++ E F Q+K FSL +++K + AD++NRG+TP EE LDP+ Q +GDTKEG+Y RE+P + E A +PL GPNQWP E L+PG R T Q+YF + A+G+RL LL++ L L P F LR LHYS +SDPG+G+ GAGAH+DYG+LT+LATD+VPGLQ++ +G+W V PR GAFI NLGDM++RW TN +ST+HRV+N G ERYSI +FFE FD V C PQ C +NP ++PP TAG++LL KY+ TH + G
Sbjct: 33 MEAVPVINMALAEGDAAKLVRDACMGPGFFYVENHGVDSQLINETFSQTKKLFSLPLEEKKRLLADKNNRGWTPYQEETLDPAVQKQGDTKEGFYFGREVPADSPE---ALKPLHGPNQWPEESLMPGLRDTYQQYFEELRALGMRLLRLLALALDLPPLYFHPYFEPPMIMLRPLHYSGVISDPGEGIFGAGAHTDYGMLTILATDEVPGLQIRQNGKWTHVSPRNGAFIINLGDMVERW---TNGSFKSTLHRVINTTGSERYSIAYFFEPCFDAVVECLPQCCGGDNPPRYPPTTAGQHLLDKYAATHAGYTG 342
BLAST of mRNA_E_fasciculatus_S2_contig8553.16681.1 vs.
Match: Hypothetical (protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YQ36_9CHLO) HSP 1 Score: 316 bits (809), Expect = 4.490e-104 Identity = 157/312 (50.32%), Postives = 204/312 (65.38%), Query Frame = 1
Query: 13 PVVDME--SPEAPDVLAKACKDFGFFYVENHGVSKDMMREVFRQSKAFFSLGIDDKMAVKADRHNRGYTPMHEEILDPSKQVKGDTKEGYYIFRELPPPTDEEEDAARPLKGPNQWPSEDLVPGWRATMQRYFITMHAVGVRLSGLLSVGLGLDPSLFERCTSEMAHALRLLHYSAEVSDPGKGVMGAGAHSDYGLLTLLATDDVPGLQVKLDGEWLDVPPREGAFICNLGDMLQRWRVVTNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCFPQFCSEENPAKHPPVTAGRYLLQKYSQTHQDFDG 942
PV+DM PEA + AC GFFYV NHGV +++ F ++++ F+L +++K + D++NRG+TP EE LDP+ Q GDTKEG+Y RE+ + E A++PL GPNQWP E LVPG R RYF + A+G +L L+++ L L P F+ + +LR LHYS S PG GV GAGAH+DYG+LT+L TD+VPGLQ+ G W DVPP GAFI NLGDML+RW TN ST+HRVVN G+ERYSI FFFE NF+ V C PQ C + P K+PP TAG++LL KY+ TH + G
Sbjct: 7 PVIDMSLPEPEAAAAMRAACVGPGFFYVSNHGVDGELVDLTFDRTRSLFALPLEEKQRLLQDKNNRGWTPFQEETLDPANQTCGDTKEGFYFGREIAADSPE---ASKPLHGPNQWPDEALVPGLRDAYTRYFNALWALGTKLLRLVALALDLPPDHFDPHFQQPIVSLRPLHYSGTKSAPGDGVFGAGAHTDYGMLTILKTDEVPGLQIHTSGAWRDVPPMPGAFIINLGDMLERW---TNGMFHSTLHRVVNTTGQERYSIAFFFEPNFEAIVECLPQCCGPDRPPKYPPTTAGQHLLDKYAATHAGYSG 312
BLAST of mRNA_E_fasciculatus_S2_contig8553.16681.1 vs.
Match: Hypothetical (protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S1L0_9CHLO) HSP 1 Score: 317 bits (811), Expect = 4.940e-104 Identity = 157/312 (50.32%), Postives = 204/312 (65.38%), Query Frame = 1
Query: 13 PVVDMESPE--APDVLAKACKDFGFFYVENHGVSKDMMREVFRQSKAFFSLGIDDKMAVKADRHNRGYTPMHEEILDPSKQVKGDTKEGYYIFRELPPPTDEEEDAARPLKGPNQWPSEDLVPGWRATMQRYFITMHAVGVRLSGLLSVGLGLDPSLFERCTSEMAHALRLLHYSAEVSDPGKGVMGAGAHSDYGLLTLLATDDVPGLQVKLDGEWLDVPPREGAFICNLGDMLQRWRVVTNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCFPQFCSEENPAKHPPVTAGRYLLQKYSQTHQDFDG 942
PV+D+ E L AC+ GFFY+ HGVS+++M +F ++A F L ++ K A+ AD +NRG+TP EE LDPS Q GDTKEG+Y R++P + E A+ PL GPNQWP E+LVPG+RAT + Y M A+G R+ +L++ LGL P+ FER + LR LHY A SDP GV GAGAH+DYGLLT LATD+VPGLQ+ G W DV PR G I NLGDML+RW TN RST+HRVV + G+ERYS+ F+E NF V C P C + P ++PP TAG+++L KY+ TH + G
Sbjct: 23 PVIDLSQGEEQVAAALKHACESVGFFYLAGHGVSEELMGRLFAANRALFGLPLEQKRAMTADANNRGWTPFREETLDPSVQTTGDTKEGFYFGRDIPADSPE---ASLPLHGPNQWPREELVPGYRATAEAYLAAMMALGARMLRVLALSLGLPPAHFERHFTSPMVFLRPLHYDATRSDPDAGVFGAGAHTDYGLLTFLATDEVPGLQIHAGGAWRDVAPRPGCLIVNLGDMLERW---TNGRYRSTLHRVVTRGGQERYSVACFYEPNFTARVECLPCCCGPDAPPRYPPTTAGQHILDKYASTHAGYTG 328
BLAST of mRNA_E_fasciculatus_S2_contig8553.16681.1 vs.
Match: Predicted (protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9T7R5_PHYPA) HSP 1 Score: 316 bits (809), Expect = 8.410e-104 Identity = 165/320 (51.56%), Postives = 216/320 (67.50%), Query Frame = 1
Query: 19 VDMESPEAPDVLA---KACKDFGFFYVENHGVSKDMMREVFRQSKAFFSLGIDDKMAVKADRHNRGYTPMHEEILDPSKQVKGDTKEGYYIFRELPPPTDEEEDAARPLKGPNQWPSEDLVPGWRATMQRYFITMHAVGVRLSGLLSVGLGLDPSLFER--CTSEMAHALRLLHYSAEVSDPGKGVMGAGAHSDYGLLTLLATDDVPGLQVKLDGE-----WLDVPPREGAFICNLGDMLQRWRVVTNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCFPQFCSEENPAKHPPVTAGRYLLQKYSQTHQDFDGNQ 948
+DM SP+ A KAC GFFY+ NHGV ++ EVF QSK FFSL +++KM V D+++RGYTP EEILDP Q KGD+KEGYY+ +P + + + +PL GPNQ+PS D++PGW+ TM Y + + R+S L+++ L L+ + FE+ T + +LRLLHYS E S+ G+ G GAHSDYGL+TLLATDDVPGLQ+ D W DVPP +GA+I NLGDML+RW +N RST+HRVV++ G ERYSIPFFFE N+D V C P CSE NP K+PP+T+G +LL KY QTH+ F +Q
Sbjct: 15 IDMASPDKHSNAARVRKACVTSGFFYIVNHGVDPVLLEEVFTQSKNFFSLPLEEKMKVIHDKNHRGYTPFEEEILDPDTQSKGDSKEGYYVGVPIP---ESDPRSRKPLHGPNQYPSPDVLPGWQETMDHYHSELIKLSKRVSRLIALALNLEETYFEKPGITDDPMASLRLLHYSDEKSNVELGIYGTGAHSDYGLITLLATDDVPGLQICRDKTAVPQVWEDVPPMKGAYIVNLGDMLERW---SNGLFRSTLHRVVSQ-GIERYSIPFFFEPNYDCLVECLPTCCSENNPPKYPPMTSGNHLLSKYKQTHKGFVSDQ 327
BLAST of mRNA_E_fasciculatus_S2_contig8553.16681.1 vs.
Match: Hypothetical (protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VI83_DUNTE) HSP 1 Score: 315 bits (806), Expect = 1.280e-103 Identity = 162/313 (51.76%), Postives = 207/313 (66.13%), Query Frame = 1
Query: 13 PVVDMESPEAPDVLA----KACKDFGFFYVENHGVSKDMMREVFRQSKAFFSLGIDDKMAVKADRHNRGYTPMHEEILDPSKQVKGDTKEGYYIFRELPPPTDEEEDAARPLKGPNQWPSEDLVPGWRATMQRYFITMHAVGVRLSGLLSVGLGLDPSLFERCTSEMAHALRLLHYSAEVSDPGKGVMGAGAHSDYGLLTLLATDDVPGLQVKLDGE-WLDVPPREGAFICNLGDMLQRWRVVTNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCFPQFCSEENPAKHPPVTAGRYLLQKYSQTHQDF 936
P +D+ E D LA AC GFFYV HG+ ++ ++ FSL ++ K A+ AD++NRG+TP EE LDPS Q +GDTKEG+Y RE+ P E +A PL GPNQWP+E LVPG+RA+M++Y M+ +G RL LL++GLGL P F+R LR LHY+ +VS P +GV GAGAHSDYG+LTLL TDDVPGLQ+ D W+DVPP+ FI NLGDML+RW TN +ST+HRVVN G+ERYS+ FFE NFDT V C PQ CS E P + PP T+G++LL KY+ TH +
Sbjct: 6 PTIDLTKSE--DELAVKIKDACMTSGFFYVGGHGIPSSLVDGTMDANRKLFSLPLEQKQALLADKNNRGWTPFGEETLDPSSQKQGDTKEGFYFGREISP---ESPEAKLPLHGPNQWPNEHLVPGYRASMEQYMRAMNELGHRLLRLLALGLGLPPDHFDRFFDRPMIFLRPLHYAPKVSAPSEGVFGAGAHSDYGMLTLLKTDDVPGLQIHTDATGWMDVPPKPECFIINLGDMLERW---TNGMYKSTLHRVVNTTGKERYSLACFFEPNFDTIVECLPQCCSPERPPQFPPTTSGQHLLDKYASTHAGY 310
BLAST of mRNA_E_fasciculatus_S2_contig8553.16681.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TU52_VOLCA) HSP 1 Score: 314 bits (805), Expect = 1.640e-103 Identity = 155/303 (51.16%), Postives = 200/303 (66.01%), Query Frame = 1
Query: 61 ACKDFGFFYVENHGVSKDMMREVFRQSKAFFSLGIDDKMAVKADRHNRGYTPMHEEILDPSKQVKGDTKEGYYIFRELPPPTDEEEDAARPLKGPNQWPSEDLVPGWRATMQRYFITMHAVGVRLSGLLSVGLGLDPSLFERCTSEMAHALRLLHYSAEVSDPGKGVMGAGAHSDYGLLTLLATDDVPGLQVKLDG---------EWLDVPPREGAFICNLGDMLQRWRVVTNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCFPQFCSEENPAKHPPVTAGRYLLQKYSQTHQDFDG 942
AC GFFYV NHGV++ ++ + F+Q +A F+L ++ KMA+ + +NRGYTP EE LDP+ Q GDTKEG+Y RE+P ++ E+ ++PL GPNQWP L+P +R +Y+ ++ +G+RL L+++ L L P F ALR LHYS E SDPG GV GAGAHSDYG+LT+LATDDVPGLQV G W DV P G FI NLGDML+RW TN RST+HRV+N GRERYSI FFFE NFD +VV P C +NP ++PP TAG++LL KY+ TH + G
Sbjct: 4 ACISSGFFYVSNHGVAESLVYDTFQQQRALFALPLESKMALLQNENNRGYTPFREETLDPAHQKHGDTKEGFYFGREIP---EDSEEVSKPLHGPNQWPDPQLLPRYREVTWQYYEALYGLGMRLLRLVALSLDLPPDYFAAAFDRPMVALRPLHYSGERSDPGAGVFGAGAHSDYGMLTILATDDVPGLQVGGAGGRGRAGGNRRWWDVEPIPGTFIINLGDMLERW---TNGRYRSTLHRVINTTGRERYSIAFFFEPNFDAQVVALPCCCGPDNPPRYPPTTAGQHLLDKYAATHAGYHG 300
BLAST of mRNA_E_fasciculatus_S2_contig8553.16681.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QMT0_SELML) HSP 1 Score: 314 bits (805), Expect = 4.410e-103 Identity = 162/319 (50.78%), Postives = 210/319 (65.83%), Query Frame = 1
Query: 19 VDMESPEAPDV---LAKACKDFGFFYVENHGVSKDMMREVFRQSKAFFSLGIDDKMAVKADRHNRGYTPMHEEILDPSKQVKGDTKEGYYIFRELPPPTDEEEDAARPLKGPNQWPSEDLVPGWRATMQRYFITMHAVGVRLSGLLSVGLGLDPSLFER--CTSEMAHALRLLHYSAEVSDPGKGVMGAGAHSDYGLLTLLATDDVPGLQVKLDGE-----WLDVPPREGAFICNLGDMLQRWRVVTNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCFPQFCSEENPAKHPPVTAGRYLLQKYSQTHQDFDGN 945
+D+ SP+ + L KAC + GFFYV NHG+ + M EVF Q++ FF L +++K V D+ NRGYTP EE LDP KQ+ GD+KEGYYI RE+P + + A P +GPNQWPS +L+PGWR TM++YF + + RL L+++ L LD + F++ LRLLHY A V++P KG GAGAHSDYG+LTLLATD VPGLQ+ + + W DV P +GAFI NLGDML+RW TN+ RST+HRV+N G ERYSIPFF E NFD V C P CS NP K+PP+ +G +L +Y TH+ D N
Sbjct: 21 IDISSPDVKSLALQLRKACLETGFFYVINHGIGEAFMEEVFNQTRKFFELPLEEKTKVLQDKRNRGYTPYSEEKLDPVKQIAGDSKEGYYIGREIP---ETDPRANEPYQGPNQWPSPELLPGWRQTMEKYFQEVENLSRRLIKLIAISLDLDKTFFDKPGMFDHPMALLRLLHYPAGVTNPEKGEFGAGAHSDYGMLTLLATDSVPGLQICKEKDAKKQVWEDVQPIKGAFIVNLGDMLERW---TNNLYRSTLHRVLNH-GEERYSIPFFMEPNFDCIVECLPTCCSPSNPPKYPPIKSGDHLTYRYQITHKGLDAN 332 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8553.16681.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8553.16681.1 >prot_E_fasciculatus_S2_contig8553.16681.1 ID=prot_E_fasciculatus_S2_contig8553.16681.1|Name=mRNA_E_fasciculatus_S2_contig8553.16681.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=317bp MWAPPVVDMESPEAPDVLAKACKDFGFFYVENHGVSKDMMREVFRQSKAFback to top mRNA from alignment at E_fasciculatus_S2_contig8553:2..4273- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8553.16681.1 ID=mRNA_E_fasciculatus_S2_contig8553.16681.1|Name=mRNA_E_fasciculatus_S2_contig8553.16681.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4272bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8553:2..4273- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8553:2..4273- >mRNA_E_fasciculatus_S2_contig8553.16681.1 ID=mRNA_E_fasciculatus_S2_contig8553.16681.1|Name=mRNA_E_fasciculatus_S2_contig8553.16681.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=951bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8553:2..4273- (Ectocarpus fasciculatus EfasUO2)back to top |