prot_E_fasciculatus_S2_contig8548.16674.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8548.16674.1
Unique Nameprot_E_fasciculatus_S2_contig8548.16674.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length192
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8548.16674.1 vs. uniprot
Match: D7G1C0_ECTSI (Lissencephaly-1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C0_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 9.770e-76
Identity = 130/159 (81.76%), Postives = 131/159 (82.39%), Query Frame = 0
Query:   31 VVESVAFAPESAERTLATAVGSAGGSAQPGAAANKPRANGAGGGGGVTAWGEEGAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWE 189
            VVES+AFAPESAER LATAVGS GG                  GGG      EGAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGH VTALAMHKTSPIVVSGGVD ELHVWE
Sbjct:  288 VVESIAFAPESAERALATAVGSEGG------------------GGG------EGAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHLVTALAMHKTSPIVVSGGVDGELHVWE 422          
BLAST of mRNA_E_fasciculatus_S2_contig8548.16674.1 vs. uniprot
Match: A0A5D6Y4C8_9STRA (Lissencephaly-1 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4C8_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.400e-47
Identity = 89/192 (46.35%), Postives = 123/192 (64.06%), Query Frame = 0
Query:    2 LASCGNDHSVKVWSVHGGQCLHDLREHTHVVESVAFAPESAERTLATAVGSAGGSAQPGAAANKPRANGAGGGGGVTA-WGEEGAVRRR--FVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 190
            LASCGND S+  W +   + L  +REH HVVESVAFA   A+        +   +A      N   A G G G  V A  G+ GA  RR  F+ SGSRD+TV+LW A  G  LM F+ HENWVRCV  HP G +V+S ++DR++R +D++TGRC R L++AH HF+T+  +H + P++V+GG+D+ ++VWEC
Sbjct:  264 LASCGNDRSILFWDLQHMRVLQAIREHEHVVESVAFARSGAQEQAVERAHAKKLAAVGAVLGNGDAAAGGGTGPHVAADVGDVGAGSRRVKFLVSGSRDRTVRLWEAFSGALLMNFASHENWVRCVRFHPCGKYVISVAEDRTLRVYDIETGRCVRTLDEAHAHFLTSADVHPSLPLIVTGGIDKVINVWEC 455          
BLAST of mRNA_E_fasciculatus_S2_contig8548.16674.1 vs. uniprot
Match: A0A8K1CCN7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCN7_PYTOL)

HSP 1 Score: 166 bits (421), Expect = 2.330e-46
Identity = 86/194 (44.33%), Postives = 123/194 (63.40%), Query Frame = 0
Query:    2 LASCGNDHSVKVWSVHGGQCLHDLREHTHVVESVAFAP-----ESAERTLATAVGSAGGSAQPGAAANKPRANGAGGGGGVTAWGEEGAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 190
            LASCGND ++  W +   + L  LREH HVVESV FA      ++ E+ LA  + S  G       A    ANG       +A    G  + +F+ SGSRD+TV+LW A  G  LM F+ HENWVRCV  HP G +V+S ++D+++R FD++TGRC R +++AHGHF+T+L +H T P++V+G +D+ ++VWEC
Sbjct:  247 LASCGNDRAILFWDLQHHRVLQALREHDHVVESVVFAKSGPQEQAIEKFLAPKLASVVG-------APLDAANG-------SAELSAGPRKVKFILSGSRDRTVRLWEAFSGTMLMNFASHENWVRCVRFHPCGKYVVSVAEDKTIRVFDIETGRCVRTVDEAHGHFLTSLDVHPTLPLMVTGSIDKLINVWEC 426          
BLAST of mRNA_E_fasciculatus_S2_contig8548.16674.1 vs. uniprot
Match: A0A2D4CDK0_PYTIN (Lissencephaly-1 homolog n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDK0_PYTIN)

HSP 1 Score: 162 bits (409), Expect = 2.020e-44
Identity = 83/191 (43.46%), Postives = 116/191 (60.73%), Query Frame = 0
Query:    2 LASCGNDHSVKVWSVHGGQCLHDLREHTHVVESVAFAPESAERTLATAVGSAGGSAQPGAAANKPRANGAGGGGGVTAWGEEGAVRRR--FVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 190
            LASCGND S+  W +   + L  LREH HVVESV FA   A+             AQ     + P +  A  G G T      A  R+  F+ SGSRD+TV+LW A     LM+FS HENWVRCV  HP G + +S ++DR++R  D++TGRC R ++ AH HF+T+L +H + P++++GG+D+ ++VWEC
Sbjct:  261 LASCGNDRSILFWDLQHHRVLQSLREHEHVVESVVFAKSGAQEQAIEKF-----HAQKLVTVSSPSSETALNGSGSTTDAAHVASPRKIKFLLSGSRDRTVRLWEAFSATMLMSFSSHENWVRCVRFHPCGRYAVSVAEDRTIRVHDIETGRCVRTVDQAHEHFLTSLDIHASLPLMITGGIDKHINVWEC 446          
BLAST of mRNA_E_fasciculatus_S2_contig8548.16674.1 vs. uniprot
Match: A0A484E3V1_BRELC (Lissencephaly-1 homolog n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3V1_BRELC)

HSP 1 Score: 160 bits (406), Expect = 6.830e-44
Identity = 85/198 (42.93%), Postives = 119/198 (60.10%), Query Frame = 0
Query:    2 LASCGNDHSVKVWSVHGGQCLHDLREHTHVVESVAFAPESAERTL---------ATAVGSAGGSAQPGAAANKPRANGAGGGGGVTAWGEEGAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 190
            LASCGND S+  W +   + L  +REH HVVESV FA    E+ +         AT   S    +      N+   + AG   GV    +    R + + SGSRD+TV+LW A  G  L+ F+ HENWVR V  HPSG + LSA +D+++R FD+++GRC R L++AH HFVT L +H + P++VSGG+D+ ++VWEC
Sbjct:  260 LASCGNDRSILFWDLPHMRILQSIREHEHVVESVVFAKAGQEQVIEKIYAKKLAATGHFSPANGSSFAEVNNRVTDSTAGEPSGVAVVSKPTIRRMKILLSGSRDRTVRLWEAFTGTQLIVFASHENWVREVRFHPSGKYALSAGEDKTIRVFDIESGRCVRTLDEAHSHFVTCLDVHPSLPLIVSGGIDKIINVWEC 457          
BLAST of mRNA_E_fasciculatus_S2_contig8548.16674.1 vs. uniprot
Match: W7TVA4_9STRA (Platelet-activating factor acetylhydrolase ib subunit alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVA4_9STRA)

HSP 1 Score: 159 bits (403), Expect = 1.270e-43
Identity = 86/197 (43.65%), Postives = 113/197 (57.36%), Query Frame = 0
Query:    1 MLASCGNDHSVKVWSVHGGQCLHDLREHTHVVESVAFAPESAERTL------ATAVGSAGGSAQPGAAANKPRANGAGGGGGVTAWGEEGAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWECR 191
            +LAS G+D  V VW++     +  LREH+HVVE+VAF P      +      +T +GS  G A  G  +                   +G+    ++ SGSRDKT+ LWNA  G CL+  + HENWVR V  HPSG F+LS SDDRS+R FD+   RC R L DAH  FV+ALA H T P + +G V+RE+ +WECR
Sbjct:  260 LLASGGSDRLVAVWALDTCAPVAVLREHSHVVEAVAFPPPGVAVKIDGNKGGSTGLGSENGEASAGLQS-------------------QGSAEEAYLVSGSRDKTIMLWNARTGQCLLRLADHENWVRSVRFHPSGQFLLSVSDDRSLRVFDIAKARCIRSLPDAHEQFVSALAQHPTLPYLATGSVNREIKLWECR 437          
BLAST of mRNA_E_fasciculatus_S2_contig8548.16674.1 vs. uniprot
Match: K3WAC5_GLOUD (Lissencephaly-1 homolog n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAC5_GLOUD)

HSP 1 Score: 159 bits (401), Expect = 4.180e-43
Identity = 86/206 (41.75%), Postives = 125/206 (60.68%), Query Frame = 0
Query:    2 LASCGNDHSVKVWSVHGGQCLHDLREHTHVVESVAFAPESA-----ERTLATAVGSAGGSAQPG---AAANKPR--------ANGAGGGGGVTAWGEEGAVRR-RFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 190
            LA+CGND S+ +W +   + L  +REH HVVESV FA   A     E+  A  + +AG     G   A A  P          +       VT      +VRR +F+ SGSRD+TV+LW A  G  LM F+ HENWVRCV  HP G + +SA++D+++R +D++TGRC R L++AH HF+T++ +H T P+++SG +D+ ++VWEC
Sbjct:  266 LATCGNDRSILLWDLQHMRVLQSIREHEHVVESVTFAKSGAQELAIEKAHAKKLVAAGAVVAIGNGEAVARSPEDALTTDMVVD-------VTNASTSSSVRRVKFLLSGSRDRTVRLWEAFSGTLLMNFASHENWVRCVRFHPCGKYAISAAEDKTIRVYDLETGRCVRTLDEAHSHFLTSVDVHPTLPLMISGSIDKLINVWEC 464          
BLAST of mRNA_E_fasciculatus_S2_contig8548.16674.1 vs. uniprot
Match: A0A7S2MUP0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MUP0_9STRA)

HSP 1 Score: 150 bits (380), Expect = 6.480e-43
Identity = 79/193 (40.93%), Postives = 114/193 (59.07%), Query Frame = 0
Query:    1 MLASCGNDHSVKVWSVHGGQCLHDLREHTHVVESVAFAPESAERTLATAVGSAGGSAQPGAAANKPRANGAGGGGGVTAWGEEGAVR----RRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWE 189
            +LA+ GND  + V+     + L +LR H HV+ES+AF   +A                  +AA+ P++         T    E   R    R ++ASGSRD+TVKLW+     CLM+F  HENWVR VL+HP+G F++S  DD+S+R +D+K  RC R ++ AH HFVT++AMH T P++VSGGVD+ +  W+
Sbjct:   14 LLATSGNDRVIMVYDAESRKKLCELRGHDHVIESLAFLTCAAT-----------------SAADAPKS--------ATKLTPEERRRKEEIRDYLASGSRDRTVKLWSIKAASCLMSFESHENWVRGVLIHPNGKFLISCGDDKSIRVYDIKANRCLRTIDGAHSHFVTSIAMHHTLPVLVSGGVDQSVKCWQ 181          
BLAST of mRNA_E_fasciculatus_S2_contig8548.16674.1 vs. uniprot
Match: B8C7T8_THAPS (Platelet-activating factor acetylhydrolase beta subunit-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7T8_THAPS)

HSP 1 Score: 147 bits (370), Expect = 1.030e-38
Identity = 79/167 (47.31%), Postives = 104/167 (62.28%), Query Frame = 0
Query:   24 DLREHTHVVESVAFAPESAERTLATAVGSAGGSAQPGAAANKPRANGAGGGGGVTAWGEEGAVRRRFVASGSRDKTVKLWN-ASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWE 189
            +LR H HVVES++F   S                + G+AA++P           T+  E  +    ++ASGSRD+TV+LW  A+ G CLMTF  HENWVR VL+HPSG  +LS  DDRS+R FD+K+ RC R +EDAH HFVT++AMH T PI+VSGGVD  +  W+
Sbjct:  302 ELRGHDHVVESLSFLCSSLLP-------------KKGSAASRP----------TTSAAEGASSSWEYLASGSRDRTVRLWTVANGGSCLMTFRAHENWVRGVLIHPSGNHILSCGDDRSIRVFDIKSNRCLRTIEDAHPHFVTSMAMHYTLPILVSGGVDHAVKCWQ 445          
BLAST of mRNA_E_fasciculatus_S2_contig8548.16674.1 vs. uniprot
Match: A0A329RP37_9STRA (Lissencephaly-1 homolog n=16 Tax=Peronosporaceae TaxID=4777 RepID=A0A329RP37_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.270e-38
Identity = 88/200 (44.00%), Postives = 113/200 (56.50%), Query Frame = 0
Query:    2 LASCGNDHSVKVWSVHGGQCLHDLREHTHVVESVAFAPESAERTL---------AT-AVGSAGGSAQPGAAANKPRANGAGGGGGVTAWGEEGAVRR-RFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 190
            LASCGND S+  W +   + L  +REH HVVESV FA    E+ +         AT A+  A GS  P +  +   A+ AG   G  A      VRR +F+ SGSRD+TV+LW A  G  LM F+ HENWVR V  HPSG + LSA +D+++R FDV TGRC R L++AH HFVT L +               ++VWEC
Sbjct:  260 LASCGNDRSILFWDLQHMRVLQSIREHEHVVESVVFAKTGQEQVIEKIHSKKLAATGALAPANGSVSPKSNNHDMTASSAGEPTGAVAVASVPTVRRMKFLLSGSRDRTVRLWEAFSGMQLMMFASHENWVREVRFHPSGKYALSAGEDKTIRVFDVDTGRCVRTLDEAHSHFVTCLDVXXXXXXXXXXXXXXIINVWEC 459          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8548.16674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1C0_ECTSI9.770e-7681.76Lissencephaly-1 homolog n=1 Tax=Ectocarpus silicul... [more]
A0A5D6Y4C8_9STRA1.400e-4746.35Lissencephaly-1 homolog n=1 Tax=Pythium brassicum ... [more]
A0A8K1CCN7_PYTOL2.330e-4644.33Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4CDK0_PYTIN2.020e-4443.46Lissencephaly-1 homolog n=2 Tax=Pythium insidiosum... [more]
A0A484E3V1_BRELC6.830e-4442.93Lissencephaly-1 homolog n=1 Tax=Bremia lactucae Ta... [more]
W7TVA4_9STRA1.270e-4343.65Platelet-activating factor acetylhydrolase ib subu... [more]
K3WAC5_GLOUD4.180e-4341.75Lissencephaly-1 homolog n=1 Tax=Globisporangium ul... [more]
A0A7S2MUP0_9STRA6.480e-4340.93Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B8C7T8_THAPS1.030e-3847.31Platelet-activating factor acetylhydrolase beta su... [more]
A0A329RP37_9STRA1.270e-3844.00Lissencephaly-1 homolog n=16 Tax=Peronosporaceae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 2..16
score: 32.66
coord: 91..105
score: 43.7
coord: 176..190
score: 29.65
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 107..146
e-value: 3.4E-7
score: 39.9
coord: 18..104
e-value: 7.2E-6
score: 35.5
coord: 149..189
e-value: 7.5E-5
score: 32.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 89..104
e-value: 0.01
score: 16.7
coord: 151..188
e-value: 3.5E-4
score: 21.3
coord: 108..145
e-value: 1.7E-7
score: 31.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 89..113
score: 9.305
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..24
score: 9.773
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 114..155
score: 11.678
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 157..191
score: 11.611
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..191
e-value: 3.0E-47
score: 162.9
NoneNo IPR availablePANTHERPTHR44129:SF1LISSENCEPHALY-1 HOMOLOGcoord: 1..191
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 1..191
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 91..105
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 176..190
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..191
score: 27.737
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 2..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8548contigE_fasciculatus_S2_contig8548:249..3815 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8548.16674.1mRNA_E_fasciculatus_S2_contig8548.16674.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8548 165..4400 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8548.16674.1 ID=prot_E_fasciculatus_S2_contig8548.16674.1|Name=mRNA_E_fasciculatus_S2_contig8548.16674.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=192bp
MLASCGNDHSVKVWSVHGGQCLHDLREHTHVVESVAFAPESAERTLATAV
GSAGGSAQPGAAANKPRANGAGGGGGVTAWGEEGAVRRRFVASGSRDKTV
KLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTG
RCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWECR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011047Quinoprotein_ADH-like_supfam
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep