mRNA_E_fasciculatus_S2_contig8520.16656.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8520.16656.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K566_9PHAE) HSP 1 Score: 426 bits (1095), Expect = 1.350e-143 Identity = 212/253 (83.79%), Postives = 222/253 (87.75%), Query Frame = 1
Query: 1 CLCGDELVGSPTDDVYGDGGSVCGIDITLGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADDQNNRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGTTESSTACTMGCSGNTDETCGGFDALSLYEIVSA--PTPAPFTXXXXXXXXXXXXPASPVVPSGDYDLVGCVADSQAARVMPVGPLAEDAMSAEICFGICSGQDASYTHFGTQYGEE 753
CLCGDELVGSPTDDVYGDGGSVCGIDIT GGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVAD Q++RVM+EGPMSA TMSAEICLGICS MD+SYTHFGTQYG ECWCTGSLGTTE+STACT C+GN ETCGGFDAL+LYEI+S PTPAP T PASPVVPSGDYD V CVADSQ++RVMPVGPLAE MSAEICFGICS QD SYTHFGTQYGEE
Sbjct: 275 CLCGDELVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDRVMSEGPMSAATMSAEICLGICSEMDSSYTHFGTQYGEECWCTGSLGTTETSTACTYPCAGNAGETCGGFDALTLYEIISEAPPTPAPLTPPGPMPA-----PASPVVPSGDYDFVDCVADSQSSRVMPVGPLAEAVMSAEICFGICSAQDDSYTHFGTQYGEE 522
BLAST of mRNA_E_fasciculatus_S2_contig8520.16656.1 vs.
Match: WSC (domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F7_ECTSI) HSP 1 Score: 395 bits (1015), Expect = 1.700e-136 Identity = 202/231 (87.45%), Postives = 212/231 (91.77%), Query Frame = 1
Query: 1 CLCGDELVGSPTDDVYGDGGSVCGIDITLGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADDQNNRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGTTESSTACTMGCSGNTDETCGGFDALSLYEIVSA--PTPAPFTXXXXXXXXXXXXPASPVVPSGDYDLVGCVADSQAARVMPVGPLAEDAMSAEI 687
CLCGD+LVGSPTDDVYGDGGSVCGIDIT GGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSE IGCVAD Q++RVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLG+TE+STACTM C+GNT ETCGGFDAL+LYEIVS PTPAPFT XXXXXX SPVVPSGDYD VGCVADSQ++RVMPVGPL ED MSAE+
Sbjct: 50 CLCGDDLVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSEFIGCVADSQDDRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGSTETSTACTMDCAGNTAETCGGFDALTLYEIVSEAPPTPAPFTPPGXXXXXX-----SPVVPSGDYDFVGCVADSQSSRVMPVGPLTEDVMSAEV 275
BLAST of mRNA_E_fasciculatus_S2_contig8520.16656.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6V8_9PHAE) HSP 1 Score: 309 bits (791), Expect = 1.890e-100 Identity = 147/162 (90.74%), Postives = 153/162 (94.44%), Query Frame = 1
Query: 1 CLCGDELVGSPTDDVYGDGGSVCGIDITLGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADDQNNRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGTTESSTACTMGCSGNTDETCGGFDAL 486
CLCGDELVGSPTDDVYGDGGSVCGIDIT GGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVAD Q++RVM+EGPMSA TMSAEICLGICS MD+SYTHFGTQYG ECWCTGSLGTTE+STACT C+GN ETCGGFDAL
Sbjct: 275 CLCGDELVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDRVMSEGPMSAATMSAEICLGICSEMDSSYTHFGTQYGEECWCTGSLGTTETSTACTYPCAGNAGETCGGFDAL 436
BLAST of mRNA_E_fasciculatus_S2_contig8520.16656.1 vs.
Match: WSC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K384_9PHAE) HSP 1 Score: 277 bits (709), Expect = 1.690e-87 Identity = 165/267 (61.80%), Postives = 180/267 (67.42%), Query Frame = 1
Query: 1 CLCGDELVGSPTDDVYGDGGSVCGIDITLGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADDQNNR-------------------------------VMAEGPMSADTMSAEIC-----LGICSGMDASYTHFGTQYGN---------ECWCTGSLGTTESSTACTMGCSGNTDETCGGFDALSLYEIVSA--PTPAPFTXXXXXXXXXXXXPASPVVPSGDYDLVGCVADSQAARVMPVGPL 660
CLCGDELVGSPTDDVYGDGGSVCGIDIT GGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVAD Q++R VM+EGPMSA TMSAE+ + + + F + +CWCTGSLGTTE+STACT C+GN ETCGGFDAL+LYEI+S PTPAP T XXXXXXX PVVPSGDYD V CVADSQ+ RV G +
Sbjct: 215 CLCGDELVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDRDGYTELHVRRIATALQVNPAGSRASPFFDSQVMSEGPMSAATMSAEVGAIPFQVNFLVSLTKALLFFPLRMLPSSSPKSRLVQCWCTGSLGTTETSTACTYPCAGNAGETCGGFDALTLYEIISEAPPTPAPLTPPGXXXXXXX-----PVVPSGDYDFVDCVADSQSPRVRQRGEI 476
BLAST of mRNA_E_fasciculatus_S2_contig8520.16656.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN6_9PHAE) HSP 1 Score: 237 bits (605), Expect = 5.190e-71 Identity = 156/274 (56.93%), Postives = 179/274 (65.33%), Query Frame = 1
Query: 1 CLCGDELVGSPTDDVYGDGGSVCGIDITLGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDP---PVGS---ELIGCVADDQNNRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGTTESSTACTMGCSGNTDETCGGFDALSLYEIVSAPT-PAPFTXXXXXXXXXXXXPASPVVPSGDYDLVGCVADSQAARVMPVGPLAEDAMSAEICFGICSGQDASYTHFGTQYGEECWCTGSLGTTESSTAC 801
CLCGDELVGSP DDVYG GGSVCGIDIT GGDVPEYKYLCSGDSRV CGTDDHISVYS+ GSTGGG++D +P PVGS EL GCVADDQ+NRVM P++ + MSAE D+ G+ +GSLG T+SSTAC C+GN +E C GF+A+S+YEI S T P + XXXXXXXXX VVPS D +LVGCVAD ARVMPVGPL+ +AM+AE G GSLG T+SSTAC
Sbjct: 182 CLCGDELVGSPIDDVYGIGGSVCGIDITFGGDVPEYKYLCSGDSRVRCGTDDHISVYSIGGSTGGGNEDEEEPNPAPVGSDDFELTGCVADDQSNRVMPVEPIAENAMSAEDAAH--PSRDSPNISRRFALGDVRAWSGSLGATQSSTACDYDCAGNAEEICSGFNAMSVYEIASVTTSPTDYPTXXXXXXXXX------VVPSDDSELVGCVADFNGARVMPVGPLSSNAMTAEDDDG-----------------------GSLGATQSSTAC 424
BLAST of mRNA_E_fasciculatus_S2_contig8520.16656.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ76_9PHAE) HSP 1 Score: 227 bits (579), Expect = 3.670e-67 Identity = 128/255 (50.20%), Postives = 157/255 (61.57%), Query Frame = 1
Query: 1 CLCGDELVGSPTDDVYGDGGSVCGIDITLGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADDQNNRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGTTESSTACTMGCSGNTDETCGGFDALSLYEIVSAPTPAPFTXXXXXXXXXXXXPASPVVPSGD-YDLVGCVADSQAARVMPVGPLAEDAMSAEICFGICSGQDASYTHFGTQYGEECWC 762
CLCGDEL GSP DDV G+ SVCG+D T ++PEYK+LCSG+S VLCGTD H+SVYSL+ G +D GD ELIGC DD+ RVM+ GP+ D MSAEIC IC + + THFGTQYGNEC+CT LG + ST CT C GN DETCGGFD ++ Y I + A GD Y +GC+AD R+M + MSAEIC+GIC +D + THFGTQ+G+EC+C
Sbjct: 238 CLCGDELDGSPYDDVRGE--SVCGVDYTDDVNIPEYKFLCSGESTVLCGTDTHMSVYSLNEDRGANND--GD----YELIGCRVDDREARVMSVGPIEGDAMSAEICFDICRELHPTSTHFGTQYGNECFCTDVLGESAVSTDCTYDCIGNPDETCGGFDRITAYRIAGSEPSA-----------------------GDGYVSIGCLADKNGDRIMDRRMVTSIPMSAEICYGIC--KDGTNTHFGTQWGKECFC 459
BLAST of mRNA_E_fasciculatus_S2_contig8520.16656.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV1_ECTSI) HSP 1 Score: 223 bits (569), Expect = 3.940e-65 Identity = 127/256 (49.61%), Postives = 155/256 (60.55%), Query Frame = 1
Query: 1 CLCGDELVGSPTDDVYGDGGSVCGIDITLGGDVPEYKYLCSGDSRVLCGTDDHISVYSL-DGSTGGGDDDSGDPPVGSELIGCVADDQNNRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGTTESSTACTMGCSGNTDETCGGFDALSLYEIVSAPTPAPFTXXXXXXXXXXXXPASPVVPSGD-YDLVGCVADSQAARVMPVGPLAEDAMSAEICFGICSGQDASYTHFGTQYGEECWC 762
CLCGDEL GSP DDV G+ SVCG+D T ++PEYK+LCSG+S VLCGTD H+SVYSL +G D GD ELIGC DD+ RVM+ GP+ D MSAEIC IC + + THFGTQYGNEC+CT L + ST CT C GN DETCGGFD ++ Y I + A GD Y +GC+AD R+M + MSAEIC+GIC +D + THFGTQ+G+EC+C
Sbjct: 289 CLCGDELDGSPYDDVRGE--SVCGVDYTDDVNIPEYKFLCSGESTVLCGTDTHMSVYSLNEGREVSETSDDGD----YELIGCRVDDREARVMSAGPIEGDAMSAEICFDICRELHPTSTHFGTQYGNECFCTDVLRESAVSTGCTYECRGNPDETCGGFDMITAYRIAGSEPSA-----------------------GDGYVSIGCLADKNGDRIMDGRMVTSIPMSAEICYGIC--KDGTNTHFGTQWGKECFC 513
BLAST of mRNA_E_fasciculatus_S2_contig8520.16656.1 vs.
Match: WSC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYR3_9PHAE) HSP 1 Score: 200 bits (508), Expect = 5.900e-60 Identity = 93/106 (87.74%), Postives = 100/106 (94.34%), Query Frame = 1
Query: 1 CLCGDELVGSPTDDVYGDGGSVCGIDITLGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADDQNNRVMAEGPMSADTMSAEI 318
CLCGDEL GSPTDDVYG+GGSVCGIDIT GGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSE IGCVAD Q++RVM+ GP++ DTMSAE+
Sbjct: 153 CLCGDELAGSPTDDVYGEGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSEFIGCVADSQDDRVMSVGPIAEDTMSAEM 258
BLAST of mRNA_E_fasciculatus_S2_contig8520.16656.1 vs.
Match: WSC (domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL81_ECTSI) HSP 1 Score: 195 bits (496), Expect = 4.660e-59 Identity = 114/206 (55.34%), Postives = 138/206 (66.99%), Query Frame = 1
Query: 118 CSGDSRVLCGTDDHISVYSLDGSTG---------GGDDDSGDPPVGS---ELIGCVADDQNNRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGTTESSTACTMGCSGNTDETCGGFDALSLYEIV----SAPTPAPFTXXXXXXXXXXXXPASPVVPSGDYDLVGCVADSQAARVMPVGPLAEDAMSAEI 687
C+G++ CG D +++Y + G P V S + +GCVAD Q++RVM GP++ D MSAEIC GICS D S THFGTQYG ECWCTGSLGTTE+S+ACTM C+GN+ ETCGGFDALS+YEIV S PTPAP XXXXXX + S DY+++GCVAD+QAARVMPVGPLAED MSAE+
Sbjct: 3 CAGNTAETCGGFDALTLYEIASEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSNTHFGTQYGEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXXAS-------IVSDDYEVIGCVADNQAARVMPVGPLAEDTMSAEV 201
BLAST of mRNA_E_fasciculatus_S2_contig8520.16656.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIW9_9PHAE) HSP 1 Score: 114 bits (286), Expect = 1.610e-27 Identity = 53/61 (86.89%), Postives = 55/61 (90.16%), Query Frame = 1
Query: 73 IDITLGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVAD 255
IDIT GGD P+YK LCSGDSRVLCGTDDHISVYSLDG TGGGDDDSG+PPV SE IGCVAD
Sbjct: 148 IDITFGGDAPDYKCLCSGDSRVLCGTDDHISVYSLDGRTGGGDDDSGNPPVDSEFIGCVAD 208 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8520.16656.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8520.16656.1 >prot_E_fasciculatus_S2_contig8520.16656.1 ID=prot_E_fasciculatus_S2_contig8520.16656.1|Name=mRNA_E_fasciculatus_S2_contig8520.16656.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=268bp CLCGDELVGSPTDDVYGDGGSVCGIDITLGGDVPEYKYLCSGDSRVLCGTback to top mRNA from alignment at E_fasciculatus_S2_contig8520:3187..6625+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8520.16656.1 ID=mRNA_E_fasciculatus_S2_contig8520.16656.1|Name=mRNA_E_fasciculatus_S2_contig8520.16656.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3439bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8520:3187..6625+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8520:3187..6625+ >mRNA_E_fasciculatus_S2_contig8520.16656.1 ID=mRNA_E_fasciculatus_S2_contig8520.16656.1|Name=mRNA_E_fasciculatus_S2_contig8520.16656.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=804bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8520:3187..6625+ (Ectocarpus fasciculatus EfasUO2)back to top |