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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 364 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 363 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842510.6682935-CDS-E_fasciculatus_S2_contig8515:3457..3503 | 1696842510.6682935-CDS-E_fasciculatus_S2_contig8515:3457..3503 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8515 3458..3503 + |
| 1696842510.6813703-CDS-E_fasciculatus_S2_contig8515:4274..4391 | 1696842510.6813703-CDS-E_fasciculatus_S2_contig8515:4274..4391 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8515 4275..4391 + |
| 1696842510.6992536-CDS-E_fasciculatus_S2_contig8515:5213..5321 | 1696842510.6992536-CDS-E_fasciculatus_S2_contig8515:5213..5321 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8515 5214..5321 + |
| 1696842510.7176228-CDS-E_fasciculatus_S2_contig8515:5945..6037 | 1696842510.7176228-CDS-E_fasciculatus_S2_contig8515:5945..6037 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8515 5946..6037 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8515.16648.1 >prot_E_fasciculatus_S2_contig8515.16648.1 ID=prot_E_fasciculatus_S2_contig8515.16648.1|Name=mRNA_E_fasciculatus_S2_contig8515.16648.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=121bp
ELCADGPDDDDDDGNVSRGYCAVSYSAASCPTGTTWLYSGFCDGTCTATD
CCESNGGCAAFPSTDCPTGTSWVSTGTCNDDCTETDCCSAGCSDYSCPDG
WRYTGGYCGYGRFCYTTDCCA back to topmRNA from alignment at E_fasciculatus_S2_contig8515:3458..6038+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig8515.16648.1 ID=mRNA_E_fasciculatus_S2_contig8515.16648.1|Name=mRNA_E_fasciculatus_S2_contig8515.16648.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2581bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8515:3458..6038+ (Ectocarpus fasciculatus EfasUO2)
GAGCTATGCGCGGACGGCCCTGACGACGACGATGACGACGGCAACGGTAT
GGATGACGCGTAGAGCCTACGTCGTATGTGATTGATTTGTTCGTTCGGAA
GTTCTGTACGCAGCAATTTAGCATACGAACTTTTCGTGCTGTATGCATAC
GATGGTAAGTTCTAAGATAGGTTTCGGACCGATCACCTATCTGCAGTACT
ACATAGCTATTGTTTCAATGCCCTCCGACAGTATCAAAGAGATTCAACCA
CACAAATATGACGTTCAACAATCAATGCGTTCACCGATCCATCCACGTAA
AACACAATAGGCCCAGCTGTTCGAACGAGCTCCCTAATCCCTAAGCTGGT
GCACAATGACGTAGAGGCGCGAGGCAAGATCCAACCCATATCATCGACCC
ACACAAAATTGGGCCACGTTTGCTGGGGGGAAACGAGTCGTTGTTTTGCT
GCTACTCGGGCAGAGAACAAGCTGATACCGTCCGACACCACGTACATGGA
TGACCGGGGGTAGAATTTGTACTGTTTCCCATAGGAGCAGCGAGTGGAAG
TACCTTTACTTTGCGAGGGCGCTCCGAAACCACTTGTGGCTCACAAATAG
ACTGCATTCCCGCGTGCCAGCGGCACGAAGCGGCAACCGAGAACGTTGCT
TTGCGAGCATGCGCACTCCTTCACAGGGATACAGGTACTAATGACGTGAA
GCAAGAATGGGTGCTAAAGAAGTATCCGCGTTTTGGATCCCAACATGTAC
CCGCTGTCAACGGTCTTCGTCGTGCTCTGTGGTCCTCGTTCTTCGCCCAT
CACGTGTTATCGGCCAGTGTCGCGTGGCTATTGCGCAGTGTCGTACTCTG
CGGCTAGCTGCCCTACTGGCACCACGTGGTTGTACTCCGGGTTCTGCGAC
GGCACTTGCACCGCGACTGACTGCTGCGAGTCGAGTGAGTAGTGCTGCCG
CGGTCAGAACCATACATGCGTGGGACAGGGAGTTGGCAGTGCCTTGAGTA
TTTCCGAGCACACGGTGTCCCAGGTTTGAAGAAGGACAAGTACATAGATG
GGGCGATGCTCTATTGCGTTTTTAGCAATCAATCCCTGCAGATAGCTTTG
ACCCCCCGACAGTGTGCTCGCCGTGAGCGTGCTTCGTTCTCGGTTGTGAC
CCTGGTCCTGTGCATGCGTGTACCTGCTTGTTTCCCATCGGCGTTGCGAT
CTAATCTGACGGGCGAGAGACTTGTGCCGACACATAATTGGCAGCACCAA
CGTCTGGTTGTAGCTATACTTGAACATTCGAGTGTCTGGTTCGTGATGAT
GCATACAGCTGGACGCCCGCGTGCATGTGTGGCGGAAATTTTCAACACGT
CGCAAATCGGTCGTTAGGTAATGTTTTGGACGGACATTTGGTGTGCGCGT
GAATGGGATACATATCTACCTAACGTCAGTCATGAGAGCGATTTCAGCTT
TCCTTTGCCACGGAGTGCTCCGATTTCACGATCTTATCATGCCCGCCGCA
TTCGTGCGAGAGAAATCCGGAACCTCGTGGCGCGCGAGATATAAATGAGT
GGGTATCTTCGCCGTGAAAGCGACACGGGGCGACAACGGAGGACGTGGCC
TTGCGAAGGATGCGCGCTTGATCACGACGATACCACCATTTGAACTCCCT
GATGAACACGCGCAAGCTTGCCCACGCACTCACTGTCAACAGTCCATGCT
TGATCGCTCACTGTTCTGCGGTCCTCGTGCTTCGCCTATCACGTGCTTTC
GGCCAGACGGCGGGTGCGCGGCATTCCCTTCGACTGACTGTCCCACTGGC
ACTTCATGGGTGTCTACCGGGACCTGCAACGACGATTGCACGGAGACTGA
CTGCTGTTCGGCGGGTGAGTCTTTCTGACTGTGGATGATGCCGGCGCCAG
AAGTTTCGTGTTTCACCTACAGCAATTGCCGAGAGGGAGGGGTACATACC
AACTCTGGACTCCAAAAGTACGAGTTCATGTTGGCTCCAGTGTGTTGTAT
CTGCTTTAGCGTTAACTCAAGGACAACTAAGGTGGGGCGATCTCTTGGTG
CATGACTTGGGCAAGTCCGTGCAGAGGATTTCGAACCCCGAGCAATGTGC
TCAAGCGGACGTGCTGCGTTCCAGTTTGTGACCGAAATCCTTGGCATGCG
TTCCTGGTTGTTTACGCCGGTTCTCAACCTCTGGCTGCGCTGCGATACCG
GGTTCGTGACACACTCAAACGTACGGACGTCAAACATTTCCGCATACAGA
CTAGGCGGTGTCGGGTTGCGCTGCGTTTCCACAGCGATGAAGGCATTTGT
GCGAAAATAACCCGAAAGCACTTGTGGCGTATGGAAATGAGCGGTATCCT
TGCCGTCCAACAAGTGTGCCAACACTCGAACAGTTGGCCCATAACTTTCA
CCTTATCGTGGTCTCGGCCGGTCCACGCTTGTCGCGCCGTCCTTGCCCCG
GTCGTTCGTCCGCGTTTTCGTTTTATTTGATTTGCCAGGTTGTTCGGACT
ACAGCTGCCCGGACGGGTGGCGGTACACGGGTGGGTACTGTGGCTACGGC
CGCTTTTGCTACACCACCGACTGCTGCGCAT back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig8515:3458..6038+ >mRNA_E_fasciculatus_S2_contig8515.16648.1 ID=mRNA_E_fasciculatus_S2_contig8515.16648.1|Name=mRNA_E_fasciculatus_S2_contig8515.16648.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=363bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8515:3458..6038+ (Ectocarpus fasciculatus EfasUO2)
GAGCTATGCGCGGACGGCCCTGACGACGACGATGACGACGGCAACGTGTC
GCGTGGCTATTGCGCAGTGTCGTACTCTGCGGCTAGCTGCCCTACTGGCA
CCACGTGGTTGTACTCCGGGTTCTGCGACGGCACTTGCACCGCGACTGAC
TGCTGCGAGTCGAACGGCGGGTGCGCGGCATTCCCTTCGACTGACTGTCC
CACTGGCACTTCATGGGTGTCTACCGGGACCTGCAACGACGATTGCACGG
AGACTGACTGCTGTTCGGCGGGTTGTTCGGACTACAGCTGCCCGGACGGG
TGGCGGTACACGGGTGGGTACTGTGGCTACGGCCGCTTTTGCTACACCAC
CGACTGCTGCGCA back to top
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