prot_E_fasciculatus_S2_contig8509.16643.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8509.16643.1
Unique Nameprot_E_fasciculatus_S2_contig8509.16643.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length309
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8509.16643.1 vs. uniprot
Match: D8LNW2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW2_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 3.600e-58
Identity = 174/221 (78.73%), Postives = 178/221 (80.54%), Query Frame = 0 
Query:   89 MSEKEQPPMMDQKLCVAGCGFFGSSQTSQMCSKCWKDSLSKSMLGAEGKKESGAGAGSSPSSLPSLSKPSPMEXXXXXXXXXXXXXXXXXXXXXXXSVEASAXXXXXXXXXXAPPLTPPPAVXXXXXXXDTSNVEMTPVLPPQPPSAATPMAVAAPAPSPLSFSATGGAAAAPAIXXXXXXXXXXXXXXXXXXXMEAAAEGPPARPVQKNRKRCFTCHKKV 309
            MSEKEQPPMMDQKLCVAGCGFFGSSQTSQMCSKCWKDS+SKSMLGAEGKKE+GAGAGSS SSLPSLS+PSPME XXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXX          XXXXXXX+T  VEMTPVLPPQPPSAATPMAVAAPAPSPLSF   G    APAI         XXXXXXXXXX     E P ARPVQKNRKRCFTCHKKV
Sbjct:    1 MSEKEQPPMMDQKLCVAGCGFFGSSQTSQMCSKCWKDSMSKSMLGAEGKKENGAGAGSSSSSLPSLSEPSPMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETPTVEMTPVLPPQPPSAATPMAVAAPAPSPLSFGVGG---TAPAIGGGAAAEGAXXXXXXXXXXXXXXXE-PAARPVQKNRKRCFTCHKKV 217
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8509.16643.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNW2_ECTSI3.600e-5878.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002653Zinc finger, A20-typeSMARTSM00259A20_3coord: 100..124
e-value: 3.0E-7
score: 40.1
IPR002653Zinc finger, A20-typePFAMPF01754zf-A20coord: 102..124
e-value: 3.3E-10
score: 39.7
IPR002653Zinc finger, A20-typePROSITEPS51036ZF_A20coord: 97..131
score: 9.095
NoneNo IPR availablePANTHERPTHR10634AN1-TYPE ZINC FINGER PROTEINcoord: 93..309
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 102..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8509contigE_fasciculatus_S2_contig8509:1006..5388 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8509.16643.1mRNA_E_fasciculatus_S2_contig8509.16643.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8509 1006..5388 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8509.16643.1 ID=prot_E_fasciculatus_S2_contig8509.16643.1|Name=mRNA_E_fasciculatus_S2_contig8509.16643.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=309bp
SNTPRLVSYSNQPVTTTQSSTTRAPGPVRTCSTASLARRQHYHQHKGRER
KKGKLERSSLFNSHTPSGGGSTSGGDQEAAREEGPAATMSEKEQPPMMDQ
KLCVAGCGFFGSSQTSQMCSKCWKDSLSKSMLGAEGKKESGAGAGSSPSS
LPSLSKPSPMEESSPTPPDAAAPAEGGEGSGVAVSVEASAASSSTAAAVA
APPLTPPPAVAATAAAADTSNVEMTPVLPPQPPSAATPMAVAAPAPSPLS
FSATGGAAAAPAIGGGAAAEGAAGAAVATAAAMEAAAEGPPARPVQKNRK
RCFTCHKKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002653Znf_A20