mRNA_E_fasciculatus_S2_contig8488.16613.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: ABC (transporter, ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB1_ECTSI) HSP 1 Score: 580 bits (1494), Expect = 1.470e-202 Identity = 307/327 (93.88%), Postives = 310/327 (94.80%), Query Frame = 1
Query: 1 ATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMKLPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKFLDRPPRASDWEHDAEGQGWKGGDAESKKELTPAEKKAQKALRAAADKERKRKVNAPGRIKKIEV 981
ATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKM+LPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQ DLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKFLDRPPRASDWEHDAEGQGWKGGDAESKKELTPAEKKAQKALRAAA+KERK+KVNAPGRI KIE
Sbjct: 303 ATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMRLPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQ---------------DLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKFLDRPPRASDWEHDAEGQGWKGGDAESKKELTPAEKKAQKALRAAAEKERKKKVNAPGRISKIEA 614
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: ABC (transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Z5_9STRA) HSP 1 Score: 304 bits (778), Expect = 9.550e-95 Identity = 165/283 (58.30%), Postives = 201/283 (71.02%), Query Frame = 1
Query: 28 RVKMLQKMEANAT--PLPEGKSSFRAKMKLPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQT---------LAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDA-------ETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKFLDRPPRASDWE 822
R K L KM A A+ P + +A+M+LP PP+CH +QI LK A++GWG PT GV+LKL KGQ L ILGPNGAGKST L+A+AG+LPL +G R EGEGL +GVFTQ DLAQDLPQDA+ALE VL +VRE+DTT+SDEQAR +LG LGL GPKALR IG LSGGEKARVALAIF MIP+NLL+LDEPSNHLD +TL SLV+A+KGW+GTVVVVSHN++FV + THT++V+GG +++ +R P DWE
Sbjct: 377 RQKKLDKMAAAASDDPTELKRKVMKARMRLPAPPSCHKDQITLKDAAYGWGGDAPTVAGVDLKLLKGQVALALCLPGRLVILGPNGAGKSTTLRAIAGLLPLQSGSRVEGEGLNMGVFTQ---------------DLAQDLPQDAVALEHVLHKVREYDTTISDEQARNVLGGLGLTGPKALRPIGWLSGGEKARVALAIFSMIPHNLLLLDEPSNHLDTGAWNALRKTLESLVEAVKGWEGTVVVVSHNREFVESIEATHTAVVKGGGMEYHNRAPAPQDWE 644
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: Hypothetical (protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E8K4_9CRYP) HSP 1 Score: 249 bits (637), Expect = 3.310e-77 Identity = 137/277 (49.46%), Postives = 187/277 (67.51%), Query Frame = 1
Query: 1 ATKASAAQSRVKMLQKMEANATP--LPEGKSSFRAKMKLPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEG-GEVKFLDRPPRASDWE 822
A+KAS+AQSR K L+KM+ P L G+ R K+ LP PP C + + +KGA GW P ++L + +G + ILGPNG GKSTLL ALAG LPLS G R +GL +G+FTQ DLAQ+L + AL++V++ V+E D T++ E+AR +G+LGL G KAL++IG LSGGEKARVAL++FV++P+NLL+LDEPSNHLD T+++L +A++G++GTV VV+HN+ F R S TH + V G G+V F +RP R SDWE
Sbjct: 5 ASKASSAQSRKKQLEKMDIIEAPESLQTGR---RPKLVLPEPPKCRMDMVVMKGAEVGWSTEKPLYRDLSLSITRGMRIVILGPNGCGKSTLLWALAGRLPLSKGSRTTTDGLSLGLFTQ---------------DLAQELDPSSTALDVVMESVQEVDPTINTERARAAMGALGLTGEKALQQIGTLSGGEKARVALSMFVLVPHNLLLLDEPSNHLDIPTIDALTEALRGYEGTVAVVTHNRAFCDRFSPTHVAFVRGDGQVSFEERPVRESDWE 263
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: Atp-binding (cassette superfamily n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQL6_9STRA) HSP 1 Score: 242 bits (618), Expect = 1.370e-70 Identity = 140/282 (49.65%), Postives = 181/282 (64.18%), Query Frame = 1
Query: 1 ATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMKLPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAG---ERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKFLDRPPRASDWEHDAEG 837
AT ASAA SR K L+KM PL GK R ++ P PP ++L+ ASFG+ A P V+ L +G + +LGPNG GKST+LKAL G LP G ER GEGL++GVFTQ DLAQDLPQ+ IAL+ VL VR+ D +VSD+QAR LG+LGL G KA+R I LSGGEKARVAL++F ++P+NLL+LDEPSNHLD T+ +L +A+ ++GT+VV+SHNK FV RL TH +++ + +R R SDW DA+G
Sbjct: 347 ATMASAANSRKKTLEKMAIIEAPLAAGK---RPHLRFPPPPKVMPELVKLQNASFGYPPAQPLVKEVDFTLTRGTRMVLLGPNGCGKSTVLKALTGSLPALNGASSERILGEGLEMGVFTQ---------------DLAQDLPQEHIALDYVLSTVRQKDLSVSDQQARGALGALGLTGEKAMRPISALSGGEKARVALSVFALLPHNLLVLDEPSNHLDVATMETLSEALAEYRGTLVVISHNKAFVERLKVTHVGLIKNRRLVVEERMLRPSDWSFDAQG 610
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: Hypothetical (protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JYL6_GUITH) HSP 1 Score: 240 bits (613), Expect = 5.460e-70 Identity = 145/330 (43.94%), Postives = 204/330 (61.82%), Query Frame = 1
Query: 1 ATKASAAQSRVKMLQKMEANATP--LPEGKSSFRAKMKLPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEG-GEVKFLDRPPRASDWEHDAEGQGWKG-GDAESKKELTPAEKKAQKALRAAADKERKRKVNAPGRIKKIE 978
A+KAS R K L+KME P L G+ R K+ LP PP C + +K A GW + P ++L + +G + ILGPNG GKSTLL ALAG LPL G R +GL +G+FTQ DLAQ+L + AL++V++ V+E D +++ E+AR +G+LGL G K+L++IG LSGGEKARVAL++FV++P+NLL+LDEPSNHLD T+++L +A++ ++GTV VV+HN+ F R + TH + V G G+V F +RP R SDWE A + G A +K+A++A A K++ NAP RI+KIE
Sbjct: 360 ASKASXXXXRKKQLEKMEVIDAPESLQTGR---RPKLVLPEPPKCRMEMVVMKDAEIGWSEEKPLYRDLSLSITRGMRVVILGPNGCGKSTLLWALAGRLPLIKGSRTTTDGLSLGLFTQ---------------DLAQELDPSSTALDVVMETVQEVDPSINTEKARAAMGALGLTGEKSLQQIGTLSGGEKARVALSMFVLVPHNLLLLDEPSNHLDIPTIDALTEALRDYEGTVAVVTHNRAFCDRFNPTHVAFVRGDGQVSFEERPVRESDWEEVARAESAMAEGMAAEXXXXAAVDKEAKRAAYEA----NKKRGNAPKRIEKIE 667
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LZZ7_9CRYP) HSP 1 Score: 230 bits (586), Expect = 1.390e-68 Identity = 128/277 (46.21%), Postives = 183/277 (66.06%), Query Frame = 1
Query: 10 ASAAQSRVKMLQKMEANATPLPE--GKSSFRAKMKLPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGE----VKFLDRPPRASDWE 822
A++AQS+ KML+++EA LP + R ++ P P C + L GA++GW + P +G ++++E+G LAILGPNG GKSTLL AL+G LPL G+R+ E L++GVFTQ DLAQ+LP DA+AL++VL + D T++ E+ R ++G+LGL G KAL+KIG +SGGEKARVAL++FV++P+NLL+LDEPSNHLD T+ L +A++ ++GT++VV+HN+ F L+ TH + V G V RP R SDWE
Sbjct: 155 AASAQSKRKMLERIEAGRVDLPTELDTQADRPSLRFPRPQFCEQRMVALAGAAWGW-NGRPLYSGCSVEVERGMRLAILGPNGCGKSTLLAALSGRLPLLEGKRETAEHLEMGVFTQ---------------DLAQELPLDAVALDVVLKHAQAKDMTINAERCRNVMGALGLSGSKALQKIGTMSGGEKARVALSMFVLVPHNLLLLDEPSNHLDVGTVEVLTEALQEYQGTIIVVTHNRHFCELLAPTHVARVLGEPGRQTVAIEARPLRPSDWE 415
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: Uncharacterized (protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WD87_9CHLO) HSP 1 Score: 229 bits (583), Expect = 5.440e-65 Identity = 135/287 (47.04%), Postives = 181/287 (63.07%), Query Frame = 1
Query: 1 ATKASAAQSRVKMLQKMEANATPLPEGKSSFRA------KMKLPTPPACHTNQIELKGASFGWGD-----APPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKFLDRPP-RASDWEH 825
A+KAS AQS+ KML+K++A T +P ++ A +KLP P C+T I+LK A+ GWG + P GVN+ + +GQ + +LGPNGAGKSTLLKA+AG LPL AGER G+G+++ VF+Q DLAQDLP D ALE V R +D ++ E+ R LG+LGL G AL+KIGVLSGGEKARVALA F ++P N+L+LDE SNHLDA+T+ L A+K ++G ++ ++HN+ F L+ TH V G K D ASD+EH
Sbjct: 418 ASKASQAQSKAKMLEKLKAQQTVIPAAAAAAGAGDARKVALKLPRAPPCYTEAIKLKNAAVGWGTPGEPGSKPLINGVNVVIRRGQRVLVLGPNGAGKSTLLKAVAGNLPLWAGERVLGDGVRLAVFSQ---------------DLAQDLPLDMPALEYVEAVARANDPGITLEKCRQALGALGLTGTMALQKIGVLSGGEKARVALAAFALVPANVLLLDEASNHLDAQTIEVLTGALKDFEGVIIAITHNQAFAASLNATHILRVANGAAKLSDNLGLSASDFEH 689
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: Uncharacterized (protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XCU8_9CHLO) HSP 1 Score: 226 bits (575), Expect = 6.090e-64 Identity = 131/283 (46.29%), Postives = 171/283 (60.42%), Query Frame = 1
Query: 1 ATKASAAQSRVKMLQKMEANATPLPEGKS------SFRAKMKLPTPPACHTNQIELKGASFGWGDA----PPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGV----------LSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKF 789
A+KAS AQSR K L+K+++N P + + + +KLP P CH + ++ AS GWG+ P TGV LK+EKGQ + +LGPNGAGK+TLLK LAG +P+ G R GEG KI VF+Q DLAQDLP D ALE VL++ R D ++ EQ R LG+LGL G AL +IG+ LSGGEKARVALA F ++P NLL+LDE SNHLDA T+N+L A++ + G +V ++HNK F L TH V+GG+ K
Sbjct: 384 ASKASQAQSRAKQLEKIKSNMVAAPAASAGDGPGDARKVALKLPKAPPCHQEVLIMEDASIGWGEPNGLKDPLLTGVKLKVEKGQRVLVLGPNGAGKTTLLKVLAGAVPIWGGMRHLGEGAKISVFSQ---------------DLAQDLPMDRKALEYVLEKARVDDVNITQEQGRRSLGALGLSGEMALARIGMSLHYAAVVCDLSGGEKARVALAAFALVPCNLLLLDEASNHLDAATINALTTALQAFDGAIVAITHNKAFADSLHATHVLRVQGGKAKL 651
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RWN8_9CHLO) HSP 1 Score: 224 bits (570), Expect = 8.460e-64 Identity = 128/270 (47.41%), Postives = 170/270 (62.96%), Query Frame = 1
Query: 1 ATKASAAQSRVKMLQKMEANATPLPEGKSSF------RAKMKLPTPPACHTNQIELKGASFGWGDA---PPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEV 783
A+KAS AQS+ K+ +K+ +P S+ + +KLP P C T+ + LKGAS GWG PP T V+L ++KGQ + +LGPNGAGKSTLLKAL G L L +G RKEGEG+K+ VF+Q DLAQDLP AL+ V D R +D ++ E+ R LG+LGL G AL++IGVLSGGEKARVALA F ++P N+L+LDE SNHLDA T+N L A++ ++G +V ++HN F L+ TH V GG+
Sbjct: 386 ASKASQAQSKAKLAEKLRDEMVEVPTAASALGGGDLIKVALKLPRAPPCFTDVLMLKGASVGWGTPGVLPPLLTNVDLTIKKGQRVLVLGPNGAGKSTLLKALGGQLALWSGSRKEGEGVKMAVFSQ---------------DLAQDLPLHKTALQYVEDTARAYDPNITLEKCRAALGALGLVGSMALQEIGVLSGGEKARVALAAFALVPSNVLLLDEASNHLDAATINVLTGALQEFEGAIVAITHNPAFAASLNATHVLRVAGGKA 640
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Match: Uncharacterized (protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YFM3_9CHLO) HSP 1 Score: 225 bits (574), Expect = 1.230e-63 Identity = 134/296 (45.27%), Postives = 184/296 (62.16%), Query Frame = 1
Query: 1 ATKASAAQSRVKMLQKMEANATPLPEGKSSFRA------KMKLPTPPACHTNQIELKGASFGWG---------DAP-PTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTITNCKQHETRDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKFLDRPP-RASDWEHDAEG 837
A+KAS AQS+ KML+K++A T +P ++ A ++LP P C T I+L GAS GWG DAP P +G+NL + +GQ + +LGPNGAGKSTLLKA+ G +PL G R+ GEG+++ VF+Q DLAQDLP + AL+ V R +D ++ E+ R LG+LGL G AL+KIGVLSGGEKARVALA F ++P N+L+LDE SNHLDA+T++ L A+ ++G ++ ++HN+ F T+L TH V G K D A+D+EH A G
Sbjct: 411 ASKASQAQSKAKMLEKLKAQQTVVPAAAAAAGAGDARKVALRLPRAPPCFTEAIKLTGASVGWGQPPADPAAPDAPQPLISGINLVIRRGQRVLVLGPNGAGKSTLLKAIGGSIPLWGGARQLGEGVRLAVFSQ---------------DLAQDLPLEMPALDYVQAVARANDPGITLEKCRQALGALGLTGTMALQKIGVLSGGEKARVALAAFALVPANVLLLDEASNHLDAQTIDVLTGALNDFEGVIIAITHNQAFATQLKATHILRVNNGTAKLGDNMGLSAADFEHGAPG 691 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8488.16613.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8488.16613.1 >prot_E_fasciculatus_S2_contig8488.16613.1 ID=prot_E_fasciculatus_S2_contig8488.16613.1|Name=mRNA_E_fasciculatus_S2_contig8488.16613.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=331bp ATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMKLPTPPACHTNQIELback to top mRNA from alignment at E_fasciculatus_S2_contig8488:313..5731- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8488.16613.1 ID=mRNA_E_fasciculatus_S2_contig8488.16613.1|Name=mRNA_E_fasciculatus_S2_contig8488.16613.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5419bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8488:313..5731- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8488:313..5731- >mRNA_E_fasciculatus_S2_contig8488.16613.1 ID=mRNA_E_fasciculatus_S2_contig8488.16613.1|Name=mRNA_E_fasciculatus_S2_contig8488.16613.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=993bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8488:313..5731- (Ectocarpus fasciculatus EfasUO2)back to top |