mRNA_E_fasciculatus_S2_contig8482.16609.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8482.16609.1
Unique NamemRNA_E_fasciculatus_S2_contig8482.16609.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8482.16609.1 vs.
Match: Haloacid (dehalogenase-like hydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G934_ECTSI)

HSP 1 Score: 527 bits (1357), Expect = 3.160e-180
Identity = 276/294 (93.88%), Postives = 282/294 (95.92%), Query Frame = 1
Query:    1 VFDCDGVLWGGSHAIEGSREYMRALRRAGKRTFFVTNNSSKSRRQYCVKLEGFGVHGVGVEDIVTSGSAIAAYVKLSHPDVRTVYMIGEDGLEEELEMVGLRVVKEEARPTPGMTEDEFRENVMDPEVGHVGAVVVGLDTSFGFRQLCVASSYIQSGAPFLGTNPDVADRVGSLLMPGTGPMLASIQTASGVAPVVVGKPNPLLIRQLMDQNGLAASKTLMVGDRLDTDIMFGNAGGVSTALVLTGVSEMSDVVGLQAGGDKTPTYLLERLGALLPAAAEAAEAATEASTVAKM 882
            VFDCDGVLWGGSHAIEGS + ++ALRRAGKRTFFVTNNSSKSRRQYCVKLEGFGVHGVGVEDIVTSGSAIAAYVKLSHPDV+TVYMIGE+GLEEELEMVGLRVVKEEARP PGMTEDEFRENV DPEVG   AVVVGLDTSFGFRQLCVASSYIQSGA FLGTNPDVADRVGSLLMPGTGPML SIQTASGVAPVVVGKPNPLLIRQLMDQNGLAASKTLMVGDRLDTDIMFGNAGGVS+ALVLTGVSEMSDVVGLQAGGDKTPTYLLERLGALLPAA EAAEAATE S VAKM
Sbjct:   34 VFDCDGVLWGGSHAIEGSLDTVKALRRAGKRTFFVTNNSSKSRRQYCVKLEGFGVHGVGVEDIVTSGSAIAAYVKLSHPDVQTVYMIGEEGLEEELEMVGLRVVKEEARPAPGMTEDEFRENVTDPEVG---AVVVGLDTSFGFRQLCVASSYIQSGAHFLGTNPDVADRVGSLLMPGTGPMLTSIQTASGVAPVVVGKPNPLLIRQLMDQNGLAASKTLMVGDRLDTDIMFGNAGGVSSALVLTGVSEMSDVVGLQAGGDKTPTYLLERLGALLPAATEAAEAATETSAVAKM 324          
BLAST of mRNA_E_fasciculatus_S2_contig8482.16609.1 vs.
Match: Haloacid (dehalogenase-like hydrolase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPG6_9STRA)

HSP 1 Score: 270 bits (689), Expect = 1.690e-80
Identity = 148/284 (52.11%), Postives = 192/284 (67.61%), Query Frame = 1
Query:    1 VFDCDGVLWGGSHAIEGSR------EYMRALRRAGKRTFFVTNNSSKSRRQYCVKLEGFGVHGVGVEDIVTSGSAIAAYVKLSHPDVRTVYMIGEDGLEEELEMVGLRVVKEEARPTPGMTEDEFRENVMDPEVGHVGAVVVGLDTSFGFRQLCVASSYIQSGAPFLGTNPDVADRVGSLLMPGTGPMLASIQTASGVAPVVVGKPNPLLIRQLMDQNGLAASKTLMVGDRLDTDIMFGNAGGVSTALVLTGVSEMSDVVGLQAG-GDKTPTYLLERLGALLPA 831
            + DCDGVLW GS A+ G        E + ALR AGKR  F+TNNSSKSRRQY  K   FGV  V   DIVTSGSA+A Y+K+    +   Y+IGEDGL EELE+ G+  +++     P M+E EF    +DP+V    AV VG D SFGFRQ+ +AS+Y+Q G  F+G NPD ADRVG LL PGTGP+LA+IQ+ASG  PV++GKPNP+LI+ ++ Q G+  ++T MVGDRLDTD+ F NAGG+S+ LV+TGVS  +D+  L A      P +++  L +L PA
Sbjct:   37 LLDCDGVLWAGSGALPGESASTGAVETLDALRAAGKRVLFITNNSSKSRRQYAAKFAAFGV-SVDPNDIVTSGSAMANYLKME--GITYAYVIGEDGLIEELELAGVTCIRDAKGAGPLMSESEFMALELDPKVQ---AVCVGWDRSFGFRQMSIASAYLQQGVGFIGANPDNADRVGPLLFPGTGPLLAAIQSASGAVPVIIGKPNPILIKGILAQFGMDQARTAMVGDRLDTDMAFANAGGISSVLVMTGVSTDADLAALSAERAHMAPAFVMAALASLRPA 314          
BLAST of mRNA_E_fasciculatus_S2_contig8482.16609.1 vs.
Match: Phosphoglycolate (phosphatase 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYA0_PORPP)

HSP 1 Score: 192 bits (489), Expect = 3.050e-51
Identity = 119/286 (41.61%), Postives = 166/286 (58.04%), Query Frame = 1
Query:    1 VFDCDGVLWGGSHAIEGSREYMRALRRAGKRTFFVTNNSSKSRRQYCVKLEGFGVHGVGVEDIVTSGSAIAAYVKLSHPDVRTVYMIGEDGLEEELEMVGLRVVKEEARPTPGMTEDEFRENVMD-------------PEVGHVGAVVVGLDTSFGFRQLCVASSYIQSGAPFLGTNPDVADRVGS-LLMPGTGPMLASIQTASG-VAPVVVGKPNPLLIRQLMDQNGLAASKTLMVGDRLDTDIMFGNAGGVSTALVLTGVSEMSDVVGLQAGGDKTPTYLLERL 813
            + D DGVLW G  ++EGS + ++ LR  G RT FVTNN   SRR Y  KL+  G+     +DIVTSGSA+A+YVK  H D++T Y+IGE GL EELE VG+R  + +A  +  M E  F  N+ D             PE      V +G D  F   ++  AS ++Q GA FL TN D  D+  S  LMPGTGPM+ +++ A+G  A  V+GKP+ LLI  ++ + G+  +  +MVGDRLDTDI+F   GG+ + LVLTG +   ++  L     + P ++   L
Sbjct:   73 LLDQDGVLWHGESSVEGSADAVKELRARGIRTIFVTNNVRFSRRGYAQKLKRNGIDA-RPDDIVTSGSALASYVKSKHSDIKTAYVIGEPGLVEELESVGIRCFRHDA--STEMDEALFA-NLSDMSKRTDEDKQMQLPE--RCDLVAIGWDLQFSMAKMSYASFFVQKGALFLATNLDAQDKSASGYLMPGTGPMVGALECATGRAADAVIGKPSALLIETILTEFGVERADAMMVGDRLDTDILFAKNGGIGSVLVLTGCTTEQELAELDPSDIRRPDHVFPSL 352          
BLAST of mRNA_E_fasciculatus_S2_contig8482.16609.1 vs.
Match: Phosphoglycolate (phosphatase (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1ECJ4_MICCC)

HSP 1 Score: 189 bits (480), Expect = 4.890e-51
Identity = 122/284 (42.96%), Postives = 173/284 (60.92%), Query Frame = 1
Query:    1 VFDCDGVLWGGSHAIEGSREYMRALRRAGKRTFFVTNNSSKSRRQYCVKLEGFGVHGVGVEDIVTSGSAIAAYVKLSHPDVRTVYMIGEDGLEEELEMVGLRVVKEEARPTPGM------TEDEFRENVMDPEVGHVGAVVVGLDTSFGFRQLCVASSYIQSGAPFLGTNPDVADRVGSLLMPGTGPMLASIQTASGVAP-VVVGKPNPLLIRQLMDQNGLAASKTLMVGDRLDTDIMFGNAGGV-STALVLTGVSEMSDV-VGLQAGGDKTPTYLLERLGALL 825
            V DCDGVLW G   + G RE ++ LR  GKR  FVTNNS+KSRRQY  K E  G+  V  E++ ++  A AAY+K +    +   +IG  G+ +EL  + L V        PG+      TE ++ E  +DP+ G   AV+VG DTSF + +L  AS  IQ GA F+ TNPD  D +G  LMPG G ++A+++ ASGV+P +  GKP+  L+ +L+  N +  ++TL+VGDRLDTDI FG AGG  +T L L+GV  + DV   ++ GGD  P ++++ L  +L
Sbjct:    5 VMDCDGVLWQGDTLLPGVRESIQLLREMGKRLVFVTNNSNKSRRQYVHKFEKLGIF-VEKEEVFSAAFAAAAYLK-TQKFAKKAMVIGGQGIVDELNEMYLEV-------DPGVFNAVQCTEMDWEELDIDPDCG---AVIVGQDTSFTYAKLAYASLAIQRGAVFVATNPDAGDAIGPGLMPGAGAIVAAVEKASGVSPEIYAGKPSAFLL-ELLKGNRVDMARTLVVGDRLDTDIAFGRAGGAGATVLTLSGVCGLEDVDAAMEEGGD-IPNHIVQSLPHML 274          
BLAST of mRNA_E_fasciculatus_S2_contig8482.16609.1 vs.
Match: Glycerol-3-phosphate (phosphatase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G460_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.700e-49
Identity = 120/279 (43.01%), Postives = 158/279 (56.63%), Query Frame = 1
Query:    1 VFDCDGVLWGGSHAIEGSREYMRALRRAGKRTFFVTNNSSKSRRQYCVKLEGFGVHGVGVEDIVTSGSAIAAYVKLSHPDVRTVYMIGEDGLEEELEMVGLRVVKEEARPTPGMTEDEFRENVMDPEVGHVGAVVVGLDTSFGFRQLCVASSYIQSGAPFLGTNPDVADRVGSLLMPGTGPMLASIQTA----SGVAPVVVGKPNPLLIRQLMDQNGLAASKTLMVGDRLDTDIMFGNAGGVSTALVLTGVSEMSDVVGLQAGGDKTPTYLLERLGALL 825
            V DCDGVLW  + AI GS E +  +R AGKR  FVTNNS+KSR+ Y  K E     GV VE I TSGSA A   KL     + V+ IGE GL EE + VG+  V+  +    GM E EF    ++  V    AVVVG D +F FR+LC+AS YIQ+GA  + T  D +D+VG   MPG G  + +IQ +     G    V GKPN  L+  ++++     S+TLMVGDRLDTDI F   G   + LVL+G + + +    ++  D  PT++   L   L
Sbjct:   14 VLDCDGVLWHSATAIAGSVEAVSRMRAAGKRVVFVTNNSTKSRQAYLDKFEALKFEGVEVEHINTSGSAAAELCKLGGH--KKVFAIGEPGLMEEFKAVGVETVEVSSDAKTGMDEAEFENAKLEEGVS---AVVVGWDRNFSFRKLCLASLYIQAGAKLIATGLDPSDKVGGKSMPGNGCNVNAIQYSVDDPQGEHTTVAGKPNSHLMENILNKYNFTGSETLMVGDRLDTDIKFAE-GQAKSLLVLSGCTPIEEY---ESRTDVKPTHVAADLATAL 283          
BLAST of mRNA_E_fasciculatus_S2_contig8482.16609.1 vs.
Match: Hypothetical (protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CUU7_MICPS)

HSP 1 Score: 186 bits (471), Expect = 6.890e-49
Identity = 117/290 (40.34%), Postives = 175/290 (60.34%), Query Frame = 1
Query:    1 VFDCDGVLWGGSHAIEGSREYMRALRRAGKRTFFVTNNSSKSRRQYCVKLEGFGVHGVGVEDIVTSGSAIAAYVKLSHPDVRTVYMIGEDGLEEELEMVGLRVVKEEARPTPGM------TEDEFRENVMDPEVGHVGAVVVGLDTSFGFRQLCVASSYIQSGAPFLGTNPDVADRVGSLLMPGTGPMLASIQTASGVAP-VVVGKPNPLLIRQLMDQNGLAASKTLMVGDRLDTDIMFGNAGGVS-TALVLTGVSEMSDV---VGLQAGGDK----TPTYLLERLGALL 825
            V DCDGV+W G   + G+RE +  LR  GKR  FVTNNS+KSR+QY  K E  G+  V  E+I ++  A AAY+K +    +  +++G  G+ +EL  + + V        PG+      TE ++ +  +D +VG   AV+VG D +F + +L  AS  IQ GA F+ TNPD AD +G  +MPG G ++A+++TASGV+P +  GKP+  L+ +L+  N +  S+TL+VGDRLDTD+ FG AGG   T L L+GVS + DV   +  Q  G++     P ++++ L  +L
Sbjct:   24 VMDCDGVIWQGDTLLPGARESIALLREQGKRLVFVTNNSNKSRKQYVYKFEQLGI-AVEKEEIFSAAFAAAAYLK-TRKFAKKAFVVGGRGIVDELNDMQIEV-------DPGVFNAVQCTETDWEDMFLDDDVG---AVIVGQDVAFTYAKLAYASLAIQRGAAFVATNPDAADALGPGMMPGAGAIVAAVETASGVSPEMYAGKPSAFLL-ELLKGNHVDMSRTLVVGDRLDTDVAFGKAGGAGVTVLTLSGVSTLDDVDEAIEAQRAGEEDAPPVPDFIVQGLPQML 300          
BLAST of mRNA_E_fasciculatus_S2_contig8482.16609.1 vs.
Match: 4-nitrophenylphosphatase (n=2 Tax=Malassezia restricta TaxID=76775 RepID=A0A3G2S2Q0_9BASI)

HSP 1 Score: 184 bits (467), Expect = 1.210e-48
Identity = 118/291 (40.55%), Postives = 160/291 (54.98%), Query Frame = 1
Query:    1 VFDCDGVLWGGSHAIEGSREYMRALRRAGKRTFFVTNNSSKSRRQYCVKLEGFGVHGVGVEDIVTSGSAIAAYVK--LSHPDVRTVYMIGEDGLEEELEMVGLRVVKEEARPTPGMTEDEF----RENVMDPEVGHVGAVVVGLDTSFGFRQLCVASSYI--------------QSGAPFLGTNPDVADRVGSLLMPGTGPMLASIQTASGVAPVVVGKPNPLLIRQLMDQNGLAASKTLMVGDRLDTDIMFGNAGGVSTALVLTGVSEMSDVVGLQAGGDKTPTYLLERL 813
            +FDCDGVLW G+ A+ G   ++R LR  GKR  FV+NN+SKSRR    K++  G+ G   E++ +S  A AAY+K  L  P  R VY+IG  GL +EL  VG+  V +    + G+   +F    +E V+DP V    AVV G+DT   +R++  A  Y+                G  F+ TN D        + PG G + A IQ ASG  PVVVGKPN  +I  +  +     S+T+MVGDRL+TDI FG +GG+ T LVLTGVS +  V    A     PTY++  L
Sbjct:   31 LFDCDGVLWSGNEALPGVASFLRKLRARGKRLLFVSNNASKSRRTLLEKIKAMGIEGTE-EEVFSSAYATAAYLKDVLHFPTDRKVYVIGMQGLRDELSHVGISHVGDADDDSVGLEGLDFAPLAQEGVVDPSVA---AVVCGIDTKINYRKMAKAHVYLTRPGAQGPVRSGEKNGGCHFVCTNGDATFPTSYGMFPGAGAIWAGIQYASGREPVVVGKPNQPMIDTIFTRFDFDKSRTIMVGDRLNTDIAFGQSGGIDTLLVLTGVSSLEHVHADDAAA--VPTYVVSGL 315          
BLAST of mRNA_E_fasciculatus_S2_contig8482.16609.1 vs.
Match: Hypothetical (protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0ANX3_9DINO)

HSP 1 Score: 184 bits (466), Expect = 3.160e-48
Identity = 114/277 (41.16%), Postives = 160/277 (57.76%), Query Frame = 1
Query:    1 VFDCDGVLWGGSHAIEGSREYMRALRRAGKRTFFVTNNSSKSRRQYCVKLEGFGVHGVGVEDIVTSGSAIAAYVKL--SHPDVRTVYMIGEDGLEEELEMVGLRVVKEEARPTPGMTEDEFRENVMDPEVGHVGAVVVGLDTSFGFRQLCVASSYIQSGAP---FLGTNPDVADR-VGSLLMPGTGPMLASIQTASGVAPVVVGKPNPLLIRQLMDQNGLAASKTLMVGDRLDTDIMFGNAGGVSTALVLTGVSEMSDVVGLQAGGDKTPTYLLERL 813
            + DCDGVLW G+ AI GS + +R L+R+GKR  FVTN S+++R     ++       V   D+VTSGS  AA V            ++IG +GL EEL + G+ VV+    P+  M  DE     +   +  V AVVVG D +F +  L  AS ++Q G      +GTNPDVA+R     L+P  G ++A+++ AS    +VVGKP+P +IRQL++++GL A + L+VGDRLDTD+ FG   G  T LVLTGVS   +   L       PTY+ +RL
Sbjct:   72 LLDCDGVLWRGAEAIPGSADAVRRLQRSGKRLAFVTNASARTRAAVAKRISSLLGTPVPASDVVTSGSVAAAAVAAHGGGAGAANAFVIGAEGLREELRLAGVFVVE----PSLPMPFDEVAFRSLASTLPPVTAVVVGHDEAFSYATLAAASLFLQRGGEECLLIGTNPDVANRDTAGYLVPEAGSLIAAVEAASSRNAIVVGKPSPEVIRQLLERHGLKAEEVLVVGDRLDTDVRFGAGAGARTCLVLTGVSTREEAEALPFSD--RPTYIRDRL 342          
BLAST of mRNA_E_fasciculatus_S2_contig8482.16609.1 vs.
Match: Hypothetical (protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SPZ5_9CHLO)

HSP 1 Score: 182 bits (463), Expect = 3.470e-47
Identity = 119/286 (41.61%), Postives = 171/286 (59.79%), Query Frame = 1
Query:    1 VFDCDGVLWGGSHAIEGSREYMRALRRAGKRTFFVTNNSSKSRRQYCVKLEGFGVHGVGVEDIVTSGSAIAAYVKLSHPDVRTVYMIGEDGLEEELEMVGLRVVKEEARPTPGM------TEDEFRENVMDPEVGHVGAVVVGLDTSFGFRQLCVASSYIQSGAPFLGTNPDVADRVGSLL--MPGTGPMLASIQTASGVAP-VVVGKPNPLLIRQLMDQNGLAASKTLMVGDRLDTDIMFGNAGGVS-TALVLTGVSEMSDV-VGLQAGGDKTPTYLLERLGALL 825
            V DCDGV+W G+  + G RE ++ LR  GKR  FVTNNS+KSR+QY  K E FG+  V  E++ ++  A AAY+K +      VY++G  G+ +EL  + + V        PG+      TED++ E +++ +V    AV+VG D  F F +LC AS  IQ GA F+ TNPD AD +G L   MPG G  +A+++ A G +P +  GKP+  L+ +L+  N +   +TL+VGDRLDTD+ FG AG    T LVLTGVS + DV   ++AG    P +++  L  +L
Sbjct:   93 VLDCDGVIWQGNTLLPGVRESIQLLRDMGKRLVFVTNNSNKSRKQYVHKFEQFGIT-VEKEEVFSAAFAAAAYLK-TQAVTGKVYVVGGQGIVDELNEMHIEV-------DPGVFGAVKCTEDDWTELIVEDDVK---AVIVGQDLEFTFAKLCYASLAIQQGAKFVATNPDHADVLGGLRVKMPGAGACVAAVEVACGESPEIYAGKPSAFLL-ELLKGNYVNMERTLVVGDRLDTDMAFGKAGDAGLTVLVLTGVSTLEDVDAAIEAGNPNVPDHVVMGLPQML 365          
BLAST of mRNA_E_fasciculatus_S2_contig8482.16609.1 vs.
Match: 2-phosphoglycolate (phosphatase, eukaryotic n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q00UU0_OSTTA)

HSP 1 Score: 182 bits (462), Expect = 7.900e-47
Identity = 120/282 (42.55%), Postives = 155/282 (54.96%), Query Frame = 1
Query:    1 VFDCDGVLWGGSHAIEGSREYMRALRRAGKRTFFVTNNSSKSRRQYCVKLEGFGVHGVGVEDIVTSGSAIAAYVK--------------------LSHPDVRTVYMIGEDGLEEELEMVGLRV-------VKEEARPTPGMTEDEFRENVMDPEVGHVGAVVVGLDTSFGFRQLCVASSYIQSGAPFLGTNPDVADRVGSLLMPGTGPMLASIQTASGVAP-VVVGKPNPLLIRQLMDQNGLAASKTLMVGDRLDTDIMFGNAGGVS-TALVLTGVSEMSDV 759
            V DCDGV+W G   I G+R  + +LR  GKR FFVTNNS+K+R  Y  KL   G+     E I TSG A A Y++                    L +   R+ Y+IGE GL +ELE  G+ V       VK   R    M  DE+ +        +VGAVVVG D+ F F +L  AS  IQ GA F+ TNPD  D VG  L PG G ++ ++ TA G  P +  GKP+  ++  L D   +  S+TL++GDRLDTDI FG AG  + TALVLTGV+E+ DV
Sbjct:   63 VLDCDGVIWHGDRLIPGARAAIESLRARGKRVFFVTNNSTKTREHYAQKLNALGIEASKYE-IYTSGYATACYLRSRGLAEIDEGEVERGEHGERLGNDAQRSAYVIGERGLMKELEEAGIDVEAGVYDSVKCSERDWEEM--DEWSDE-------NVGAVVVGSDSKFTFAKLAYASLQIQRGAMFVATNPDAGDLVGPGLYPGAGALVNAVATACGKQPEIYCGKPSSFMLELLKDHANIDLSRTLVIGDRLDTDIAFGKAGNAALTALVLTGVTEIDDV 334          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8482.16609.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Haloacid3.160e-18093.88dehalogenase-like hydrolase family protein n=2 Tax... [more]
Haloacid1.690e-8052.11dehalogenase-like hydrolase family protein n=1 Tax... [more]
Phosphoglycolate3.050e-5141.61phosphatase 2 n=1 Tax=Porphyridium purpureum TaxID... [more]
Phosphoglycolate4.890e-5142.96phosphatase (Fragment) n=1 Tax=Micromonas commoda ... [more]
Glycerol-3-phosphate1.700e-4943.01phosphatase n=1 Tax=Hondaea fermentalgiana TaxID=2... [more]
Hypothetical6.890e-4940.34protein n=1 Tax=Micromonas pusilla TaxID=38833 Rep... [more]
4-nitrophenylphosphatase1.210e-4840.55n=2 Tax=Malassezia restricta TaxID=76775 RepID=A0A... [more]
Hypothetical3.160e-4841.16protein n=1 Tax=Pyrodinium bahamense TaxID=73915 R... [more]
Hypothetical3.470e-4741.61protein n=1 Tax=Mantoniella antarctica TaxID=81844... [more]
2-phosphoglycolate7.900e-4742.55phosphatase, eukaryotic n=2 Tax=Ostreococcus tauri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8482contigE_fasciculatus_S2_contig8482:1740..5624 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score490.7
Seed ortholog evalue4.3e-136
Seed eggNOG ortholog2880.D7G934
Model size2304
KEGG rclassRC00017,RC00151
KEGG koko:K01101,ko:K19269
KEGG ReactionR01334,R03024
KEGG Pathwayko00627,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,map00627,map00630,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00532
Hectar predicted targeting categorymitochondrion
Exons5
EggNOG free text desc.phosphoglycolate phosphatase activity
EggNOG OGsCOG0647@1,KOG2882@2759
Ec32 ortholog descriptionHAD-superfamily hydrolase, subfamily IIA
Ec32 orthologEc-15_002020.1
EC3.1.3.18,3.1.3.41,3.1.3.48
Cds size822
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8482.16609.1prot_E_fasciculatus_S2_contig8482.16609.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8482 3159..5561 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842506.953051-UTR-E_fasciculatus_S2_contig8482:1739..31581696842506.953051-UTR-E_fasciculatus_S2_contig8482:1739..3158Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8482 1740..3158 -
1696842507.0508664-UTR-E_fasciculatus_S2_contig8482:5561..56241696842507.0508664-UTR-E_fasciculatus_S2_contig8482:5561..5624Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8482 5562..5624 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842506.973895-CDS-E_fasciculatus_S2_contig8482:3158..34701696842506.973895-CDS-E_fasciculatus_S2_contig8482:3158..3470Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8482 3159..3470 -
1696842506.9895163-CDS-E_fasciculatus_S2_contig8482:4067..42501696842506.9895163-CDS-E_fasciculatus_S2_contig8482:4067..4250Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8482 4068..4250 -
1696842507.0096314-CDS-E_fasciculatus_S2_contig8482:4576..47521696842507.0096314-CDS-E_fasciculatus_S2_contig8482:4576..4752Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8482 4577..4752 -
1696842507.0241144-CDS-E_fasciculatus_S2_contig8482:5052..51971696842507.0241144-CDS-E_fasciculatus_S2_contig8482:5052..5197Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8482 5053..5197 -
1696842507.0380254-CDS-E_fasciculatus_S2_contig8482:5555..55611696842507.0380254-CDS-E_fasciculatus_S2_contig8482:5555..5561Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8482 5556..5561 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8482.16609.1

>prot_E_fasciculatus_S2_contig8482.16609.1 ID=prot_E_fasciculatus_S2_contig8482.16609.1|Name=mRNA_E_fasciculatus_S2_contig8482.16609.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=274bp
MRALRRAGKRTFFVTNNSSKSRRQYCVKLEGFGVHGVGVEDIVTSGSAIA
AYVKLSHPDVRTVYMIGEDGLEEELEMVGLRVVKEEARPTPGMTEDEFRE
NVMDPEVGHVGAVVVGLDTSFGFRQLCVASSYIQSGAPFLGTNPDVADRV
GSLLMPGTGPMLASIQTASGVAPVVVGKPNPLLIRQLMDQNGLAASKTLM
VGDRLDTDIMFGNAGGVSTALVLTGVSEMSDVVGLQAGGDKTPTYLLERL
GALLPAAAEAAEAATEASTVAKM*
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mRNA from alignment at E_fasciculatus_S2_contig8482:1740..5624-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8482.16609.1 ID=mRNA_E_fasciculatus_S2_contig8482.16609.1|Name=mRNA_E_fasciculatus_S2_contig8482.16609.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3885bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8482:1740..5624- (Ectocarpus fasciculatus EfasUO2)
GTGTTCGATTGCGATGGCGTTTTATGGGGAGGCAGCCACGCCATCGAGGG TTCACGTGAGTACATGCGCGTCAAGCAAAAGGCACCCCTTCCCCTCTACC ACGATGACACGAGATGGAAGCTACGAGGCGTGATGCACGAAAAGTTGGTG TGTGTGTAGGATATGGGAAACAAACACCCAGGAATTCGAGTACGACGAGC TTGGGGGTGGCTCACGGCAGCTCCTCAGGTCCACCGTGAGAATTGGGCAA ACCTGGTTCAAACGGCGGCACAGCAGCAATATGAATGAGGGAACTGTCCT ACCTTGAGAACACCACCTCATCCCGACACATTCCTGTTTCTTTCCGGCTC TTCGCTGCCATATCCCGTCATTGCTGCCGTTTGTCATGATGTGGTCATGA CGTCAACCAATAGTGGACACGGTGAAGGCGCTGCGGCGCGCCGGCAAGCG CACCTTCTTCGTCACCAATAACTCGAGCAAGAGCCGAAGACAGTACTGTG TCAAGCTCGAGGGCTTCGGGGTGCACGGCGTGGGTGTCGAAGACATCGTC ACTTCTGGCTCGGCGATCGCTGGTAAGAACGTAATTCGTTTTCGCTGGTG GGGTCGCCGACAACCAATGCCTGTGTTGGCTCGGGCCCAAGAATTGTTTT GTAGCTTAGGCAACAGTATGCGTACTGTAGTCAATTCCTACTGTTGATGT GAGAAGCGCTCACCTAACCGACGCAACCTCTGTCTTCTTTTGGACACTTC TCGTGCCCAAGCGTTTTCGCGACTACTGCGGTATGTAGCAGAGTATTCCC TCACATTTCCTCGAATGCAAGAAGGCGCCCATTTCCTCCTCTTGATTGCT CTTGTCGCACGTTGTTGTTCAGCCTACGTCAAGCTCTCTCACCCGGATGT ACGGACCGTGTACATGATCGGGGAAGACGGGCTCGAAGAGGAGCTTGAGA TGGTTGGGCTGAGGGTCGTGAAGGAGGAGGCGAGGCCAACTCCGGGTATG ACGGAGGACGAGTTCCGTGAGAATGTCATGGACCCAGAGGTAGGGCATGT TTGAAACGTGGCACCATGTTTGAGCGTGCGGTGCTAAGTTGGTTGTCGCA GTTTGTGCTGTAGGTGTTGGTATTGGTGGTGACGATTGTGTTTGTAGAGG TGAGGCCGCTGGTGCTAGTGTTGGCTGGTATACCGGCGTTTGTATGAGGT GCTGCTCTTACTGCCGTCCGCCAACTCCCCAAAGAAAACGGAGTAGCCAG AGTACGCTGTCGTACACGAACCCATGCCTATCACGTTCAGCAAACTATTG ATAGCAGTTTTTAAAGCCCCGCTTATCTCTCCCAACCCACCCATATTGTT GGCGCTTTTCGTCGGCCAAACTAGGTTGGGGCTGTTGTCGTGGGACTGGA CACGTCCTTCGGGTTTCGCCAGCTGTGCGTTGCCTCGAGCTACATCCAGA GCGGGGCTCCCTTCTTGGGGACAAACCCGGACGTCGCCGACCGAGTGGGA AGCCTGCTCATGCCTGGAACAGGGCCTATGTTGGCCAGCATTCAAACAGC GTCAGGGGTGAGGCAACCCCTGCCTGCCCATCTGCAAAATTGTTGGTTAG GGGACGAGGAAAGGGATGACATTTCGCGTGATTCCCCGGGAGTTACGACC CATGGGCCTTTGTCTCTTGCCGTCGCGGCATGCATCGTGTTACCCGAAAC TTGCAGTTTTCAGAAAAAGCGTTGGTGCCGGTGTTAAGTGTATCTCGGCC GTCAATTTCTCTCTTTGAGTGTACTCTGTCGGCAGCTTCTCCACTCAAGC CTCTCGCGCACCTCGAACTCTTCTTCCACTGATGATTCCTGTCCCGTTAA GCACAAGCGTTGTGCAACTCTAGCCGGCGCGTGTTGCTACTATCATTGCG AGTGCTCCCCTTCGTGATAGCAGAACCCCAATGAAGAACCTCGTCGGCCT GTTGTACTTCTCTAGGTAATGGGGCACCACCGCGAGAAAAACTTGTACAC AAATGCACGCAAGTCTGCCCCTCCCCCCCCCGCCCCCCGTCGGGGGACTC CGAGGACTAGAAACGGACGTTTTTCCTTCAGTCACCCGGTTTACTTTGTC GATGCCAATTTAACAGAACAGTATTCGCACCACGCACGCTTGCACGCGCT ACAGGTGGCACCAGTGGTCGTCGGCAAGCCCAACCCTCTCCTCATCCGCC AACTGATGGACCAGAACGGCCTCGCAGCATCCAAGACGCTCATGGTCGGC GACCGGTTGGACACGGACATCATGTTCGGAAACGCCGGAGGGGTTTCAAC CGCGCTCGTGTTGACAGGGGTCAGCGAGATGTCCGATGTCGTGGGGCTGC AGGCCGGCGGCGACAAAACGCCCACATATCTCTTGGAAAGGTTGGGAGCT TTGTTGCCCGCAGCGGCCGAGGCAGCAGAGGCGGCGACAGAAGCTTCGAC CGTCGCAAAGATGTGAACGAGGCGTTTCGAGACTTTTTTTGGTTTGTGCT TCGCCCTGTGGTGGGAGGTGCGGGCGAGTGCCGCTCTCTGTAAGACCGCG GCTTTGCCATGTTTCTTGCCGATTGAGGGCACACGGCACACCCAGATTAT GAGCACACGACAACGAATACCTCGGTTTGATAGTTATTGTTGCTCCTGGT GAGAGAAAGTTCTTCTGCAAAAACGCCCGTGACGCCACATGAAAAGTTGA TACTCTCTGGCCATTGGAGGGTTCGACCCCTCGACCTCTTGCTACATGCT CTCCTGAAGCGGTGGTTGTGGGCTATTAGAGCCGTGTGTGTGCACGGATC ACGGTTATTTTTCTAGGAAGAGGCTACAGGTCTCGGAAGTGAGGGGGGGA GGTAAGAGTGGTGAGGAAGAGAGATGTGCACGGGGCTCTCCTTCGCACAG CGCTGAGCCACCCAGTGCAATGTCTCCCTGAGCTGGCACACCTAGGGAGG CGACAGCAAGCAAACGTCCCGCTCTGGGCCGAGCGGAACACACGTACGGA GTGTTTCGAGATCCGCTCACGCGAGAACGAAGTCACGCATTCCACTGAAC GAAGGGTTGTCCACGTAGGGGCCTTCCTCAGAGGTATCGTTCCACAGATT GTTTCGAGGCCATCCTGTGTACAACAGATATGCCGTTTTTGTGTGTTGCT CAGATAGTTTCTTTTCTGAAAGCCCTTTCTGGCGGTTGAGCGTCTTCTAC TGCGACTAAACCAACCGGCGAATCGGTTTTAGCTACACTACTGCAGCAGT TGTACGAAGAAACGTCTATGCGTTTCTCTGGGAAAGCAATTCCCATGTAC GGGTTCACTGTACCGTTCAGCCTTAAATGGAAACTTGCTTCCTCAGGGGT TCCGGGTTCGTCTCCAGCTGCCGCCACGGCGGCTTCGGTCCTTGATGCTC CCAAGATTTCGACCTACCCCCGGAGCAAGGGGAAAATACCGCGTCCAACC GTAGCATTTGGCTCCAACAACGAAGCATCGTCCTAATCGTCCACCAGTAA GTCTGTTTGGACTGGGGTGGGAGCCACGGCGATGTTGGCAGGGATTTGGC CGGACTGTCCGCATGCAACGCCTTGTTTAGAGGTCGAACGATTGTGTAGC CGAAGAAGCCCACGGGGCTCGCCTAGATGTTTTACGCTGTGTCCGGACTG CGGTTCAAATATCACCAGCGTGAATAGCACGTCTGATGTCATCTTTGCGA GCAGTGTGGGGAAAGACAGTAGACACGATGTGGTGTTGTTTCTCATAGGA GTGGTGTCAACCAACCCTCCTCGCCCCTGGACCGCGAGGATCGCAAGGCA GCCTTTACTTTGAAACAAAAGCGAACCTCTCCGCCTACTGGAAGACTTGC GCGTCGCAAGGCGGCATGGGGAACATGCAGTGAAC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8482:1740..5624-

>mRNA_E_fasciculatus_S2_contig8482.16609.1 ID=mRNA_E_fasciculatus_S2_contig8482.16609.1|Name=mRNA_E_fasciculatus_S2_contig8482.16609.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=822bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8482:1740..5624- (Ectocarpus fasciculatus EfasUO2)
ATGCGCGCGCTGCGGCGCGCCGGCAAGCGCACCTTCTTCGTCACCAATAA
CTCGAGCAAGAGCCGAAGACAGTACTGTGTCAAGCTCGAGGGCTTCGGGG
TGCACGGCGTGGGTGTCGAAGACATCGTCACTTCTGGCTCGGCGATCGCT
GCCTACGTCAAGCTCTCTCACCCGGATGTACGGACCGTGTACATGATCGG
GGAAGACGGGCTCGAAGAGGAGCTTGAGATGGTTGGGCTGAGGGTCGTGA
AGGAGGAGGCGAGGCCAACTCCGGGTATGACGGAGGACGAGTTCCGTGAG
AATGTCATGGACCCAGAGGTAGGGCATGTTGGGGCTGTTGTCGTGGGACT
GGACACGTCCTTCGGGTTTCGCCAGCTGTGCGTTGCCTCGAGCTACATCC
AGAGCGGGGCTCCCTTCTTGGGGACAAACCCGGACGTCGCCGACCGAGTG
GGAAGCCTGCTCATGCCTGGAACAGGGCCTATGTTGGCCAGCATTCAAAC
AGCGTCAGGGGTGGCACCAGTGGTCGTCGGCAAGCCCAACCCTCTCCTCA
TCCGCCAACTGATGGACCAGAACGGCCTCGCAGCATCCAAGACGCTCATG
GTCGGCGACCGGTTGGACACGGACATCATGTTCGGAAACGCCGGAGGGGT
TTCAACCGCGCTCGTGTTGACAGGGGTCAGCGAGATGTCCGATGTCGTGG
GGCTGCAGGCCGGCGGCGACAAAACGCCCACATATCTCTTGGAAAGGTTG
GGAGCTTTGTTGCCCGCAGCGGCCGAGGCAGCAGAGGCGGCGACAGAAGC
TTCGACCGTCGCAAAGATGTGA
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