mRNA_E_fasciculatus_S2_contig8459.16587.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8459.16587.1
Unique NamemRNA_E_fasciculatus_S2_contig8459.16587.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8459.16587.1 vs.
Match: Similar (to sodium channel, voltage-gated, type IX, alpha isoform 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI93_ECTSI)

HSP 1 Score: 1039 bits (2686), Expect = 0.000e+0
Identity = 527/629 (83.78%), Postives = 553/629 (87.92%), Query Frame = 1
Query:    4 MVKRFPGLKIVLEALIGSVQGVLNVAAVCFVFYIIFAILCVNYFKGALMSCQGDAFDALPGEVASFLEVPVSWSEMSSGQREWFGPLSNVSDAFSGDGFSGSSSTTIGGNLSTSGVEYCDAITGGLWPDAAGCCTAWPTSAEEAPTSFEVCECLGLTWAETIPQQFDNVAVSLLALFEISTTEAWTAVTYAAVDAAGLDMQPIRDHVVARVWLFILFMLVGAYLVMNLFVGVIVDNFKKMKARAEEGGLLVTGHQRLWIKTQLIMRRLRPMKRPQPPPDRLGLLCFRLINLPWFDPAVMVCIVLNTVVLAMDYFGQSDLYTRVLGVLNYLFYALFTLEALAKILALRWAYFKDPWNRFDFFIVLGSTAGLVSLLFLGSNYGSIITVIRTFRVGRVLRLVRGLGPMAQLFQTLLMTLPSLVNVGALLFLLFFIFAAMGVQLYAKVGLEGALNAQANFRSFWDTMVLLLRFSTGENWNGFMYDVAAERDGCRSDPEYDPDVCGFTSHDNCIAIDGCGSWTIYPYMISFTFLITFVFLNLFIGVILDGFDTAKEESEDFITEEDFARFAEHWSSFDPHATCLISVRDLHSFLQTLFEPWGFGAHHQASNRELRHKVRRLDLFVFDNNKVHFK 1890
            +VKRFPGLKIVLEALIGSVQGV NVAAVCF+FYIIFAILCVNYFKG LMSCQGDAFDALPGEV SFLE P+ WSEMSSGQREWFGPLSNVS+AFSGDGFS S    IGGNLSTS VEYCD ITGGLWPDAA CC+AWPTSAEEAPTS+EVCECLGL+WAETIPQQFDNVAVSLL LFEISTTEAWT+VTYAAVDA G+ MQPIRDHV+ARVWLFILFML+GAYLVMNLFVGVIVDNFKKMKARAEEGGLLVT HQRLWIKTQLIMRRLRPMKRPQPPP RLG  CFRLINLPWFDPAVMVCIVLNTVVLAMDYFGQS+LYT VL +L Y+ YALFTLEALAKILALRWAYFKDPWNRFDFFIVLGSTAGL+SLLFL SNYG++IT                                               FAAMGVQLYAKVGLEGALNAQANFRSFWDTMVLLLRFSTGENWNGFMYDVAAERDGCRSDPEYDPDVCGFTSHDNCI IDGCGSWTIYPYMISFTFLITFVFLNLFIGVILDGFD+AKEES+DFITEED  RFAEHWS+FDPHATCL+SV+DLHSFLQ+LF+PWGFG H+QAS+RELRHKVRRLDLFVFDNNKVHFK
Sbjct:  746 IVKRFPGLKIVLEALIGSVQGVFNVAAVCFLFYIIFAILCVNYFKGLLMSCQGDAFDALPGEVVSFLEDPLPWSEMSSGQREWFGPLSNVSEAFSGDGFSSS----IGGNLSTSRVEYCDVITGGLWPDAAACCSAWPTSAEEAPTSYEVCECLGLSWAETIPQQFDNVAVSLLTLFEISTTEAWTSVTYAAVDATGVGMQPIRDHVIARVWLFILFMLLGAYLVMNLFVGVIVDNFKKMKARAEEGGLLVTEHQRLWIKTQLIMRRLRPMKRPQPPPGRLGSSCFRLINLPWFDPAVMVCIVLNTVVLAMDYFGQSNLYTSVLELLLYVLYALFTLEALAKILALRWAYFKDPWNRFDFFIVLGSTAGLLSLLFLDSNYGTVITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAMGVQLYAKVGLEGALNAQANFRSFWDTMVLLLRFSTGENWNGFMYDVAAERDGCRSDPEYDPDVCGFTSHDNCIPIDGCGSWTIYPYMISFTFLITFVFLNLFIGVILDGFDSAKEESDDFITEEDLTRFAEHWSNFDPHATCLMSVQDLHSFLQSLFKPWGFGVHYQASSRELRHKVRRLDLFVFDNNKVHFK 1370          
BLAST of mRNA_E_fasciculatus_S2_contig8459.16587.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIB7_9PHAE)

HSP 1 Score: 797 bits (2059), Expect = 1.160e-272
Identity = 406/650 (62.46%), Postives = 489/650 (75.23%), Query Frame = 1
Query:    4 MVKRFPGLKIVLEALIGSVQGVLNVAAVCFVFYIIFAILCVNYFKGALMSCQGDAFDALPGEVASFLEVPVSWSEMSSGQREWFGPLSNVSDAFSGDGFSGSSSTTIGGNLSTSGVEYCDAITGGLWPDAAGCCTAWPTSAEEAPTSFEVCECLGLTWAETIPQQFDNVAVSLLALFEISTTEAWTAVTYAAVDAAGLDMQPIRDHVVARVWLFILFMLVGAYLVMNLFVGVIVDNFKKMKARAEEGGLLVTGHQRLWIKTQLIMRRLRPMKRPQPPPDRLGLLCFRLINLPWFDPAVMVCIVLNTVVLAMDYFGQSDLYTRVLGVLNYLFYALFTLEALAKILALRWAYFKDPWNRFDFFIVLGSTAGLVSLLFLGSNYGSIITVIRTFRVGRVLRLVRGLGPMAQLFQTLLMTLPSLVNVGALLFLLFFIFAAMGVQLYAKV---------------------GLEGALNAQANFRSFWDTMVLLLRFSTGENWNGFMYDVAAERDGCRSDPEYDPDVCGFTSHDNCIAIDGCGSWTIYPYMISFTFLITFVFLNLFIGVILDGFDTAKEESEDFITEEDFARFAEHWSSFDPHATCLISVRDLHSFLQTLFEPWGFGAHHQASNRELRHKVRRLDLFVFDNNKVHFK 1890
            M+ R PGLKIVL AL  ++  VLNVAAVCF+F+IIFAIL VNYFKG LMSCQG+ FDALP  VA F+E P SW  MS+ Q+ WFGPLSN+S AFS +G  G ++ +  G++S              WPD+ GCCT WP+SA   PTS++VCECLGL W +T+PQQFDNVA +LL  FEISTTEAWT+V YAAVDA  +DMQPIRD+ V  VW F+LFML+G+YLVMNLFVGVI+DNF KMK+RAE  G+LVT  Q+ WIKTQ +  RLRP+KR   P D +G  C+++ +  WFD +VM+CIVLNT+V+AM +FGQ  +YTR +   NY F  +FT+EA+ KILA R AYF DPWNRFD FIV+G+  GL  L   G +YGSI T+IRTFR+GRVLRLVRGL  MAQLF TLL+TLPSL NVGALLFL FFI+A MGVQL+A V                     GL GA++ QANF++FW +MVLLLRFSTGENWNGFMYD+ AER+ C S+P YDPD+CGFTSH NC  ++GCGSW+I+PYMISFT  IT+VF+NLFIGVILDGFD A     D I +EDFARFA HW+ FDP ATCLISV+DLH FLQTLF PWGFG  +QAS+RE+R  +RRL L +F++NKVHFK
Sbjct:  510 MINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKGILMSCQGEEFDALPESVALFIEEPTSWDAMSADQQSWFGPLSNISAAFSINGTGGFTTASACGSISAG------------WPDSGGCCTEWPSSASSVPTSYQVCECLGLDWDQTVPQQFDNVAQALLTFFEISTTEAWTSVMYAAVDATDVDMQPIRDNRVMIVWFFMLFMLIGSYLVMNLFVGVIIDNFNKMKSRAEGDGVLVTEEQQSWIKTQHMTHRLRPLKRVTLPGDPVGDWCYKVSHHKWFDASVMICIVLNTIVMAMQFFGQGTVYTRCIEGANYSFSFIFTVEAIIKILAFRRAYFIDPWNRFDIFIVMGTNLGLAMLWMTGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVSEPGHLFSSLWTHNGYALIMVGLRGAVDEQANFQTFWGSMVLLLRFSTGENWNGFMYDMVAEREDCVSNPVYDPDMCGFTSHANCTPLNGCGSWSIFPYMISFTLTITYVFMNLFIGVILDGFDAASASDHDVIKQEDFARFASHWAEFDPRATCLISVQDLHDFLQTLFAPWGFGKDYQASDREVRAHIRRLKLRIFNDNKVHFK 1147          
BLAST of mRNA_E_fasciculatus_S2_contig8459.16587.1 vs.
Match: Voltage (Gated Calcium/Sodium Channel subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE6_ECTSI)

HSP 1 Score: 806 bits (2083), Expect = 3.020e-270
Identity = 404/629 (64.23%), Postives = 490/629 (77.90%), Query Frame = 1
Query:    4 MVKRFPGLKIVLEALIGSVQGVLNVAAVCFVFYIIFAILCVNYFKGALMSCQGDAFDALPGEVASFLEVPVSWSEMSSGQREWFGPLSNVSDAFSGDGFSGSSSTTIGGNLSTSGVEYCDAITGGLWPDAAGCCTAWPTSAEEAPTSFEVCECLGLTWAETIPQQFDNVAVSLLALFEISTTEAWTAVTYAAVDAAGLDMQPIRDHVVARVWLFILFMLVGAYLVMNLFVGVIVDNFKKMKARAEEGGLLVTGHQRLWIKTQLIMRRLRPMKRPQPPPDRLGLLCFRLINLPWFDPAVMVCIVLNTVVLAMDYFGQSDLYTRVLGVLNYLFYALFTLEALAKILALRWAYFKDPWNRFDFFIVLGSTAGLVSLLFLGSNYGSIITVIRTFRVGRVLRLVRGLGPMAQLFQTLLMTLPSLVNVGALLFLLFFIFAAMGVQLYAKVGLEGALNAQANFRSFWDTMVLLLRFSTGENWNGFMYDVAAERDGCRSDPEYDPDVCGFTSHDNCIAIDGCGSWTIYPYMISFTFLITFVFLNLFIGVILDGFDTAKEESEDFITEEDFARFAEHWSSFDPHATCLISVRDLHSFLQTLFEPWGFGAHHQASNRELRHKVRRLDLFVFDNNKVHFK 1890
            M+ R PGLKIVL AL  ++  VLNVAAVCF+F+IIFAIL VNYFKG LMSCQG+ FDALP  +A F++ P SW  MS+ Q+ WFGPLSNVS AFS +G  G ++ +            C +I  G WPD+ GCCT WP+SA   PTS+++CECLGL W +T+PQQFDNVA +LL  FEISTTEAWT+V YAAVDA  +DMQPIRD+ V  VW F+LFML+G+YLVMNLFVGVI+DNF KMK++AE  G+LVT  Q+ WIKTQ +  RLRP+KR   P D +G  C+++ +  WFD +VM+CIVLNT+V+AM +FGQ ++YTR +   NY F  +FT+EA+ KILA R AYF DPWNRFD FIV+G+  GL  L   G +YGSI T+IRTFR+GRVLRLVRGL  MAQLF TLL+TLPSL NVGALLFL FFI+A MGVQL+A VGL GA++ QANF++FW +MVLLLRFSTGENWNGFMYD+ AER+ C S+P YDPD+CGFTSH NC  ++GCGSW+I+PYMISFT  IT+VF+NLFIGVILDGFD A     D I +EDFARFA HW+ FDP ATCLISV+DLH FLQTLF PWGFG  +QAS+RE+R  +RRL L +F++NKVHFK
Sbjct: 1008 MINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKGILMSCQGEEFDALPESIALFIQEPTSWDAMSADQQSWFGPLSNVSAAFSMNGTGGFTTASA-----------CGSINAG-WPDSGGCCTEWPSSASSVPTSYQLCECLGLDWDQTVPQQFDNVAQALLTFFEISTTEAWTSVMYAAVDATDVDMQPIRDNRVMIVWFFMLFMLIGSYLVMNLFVGVIIDNFNKMKSKAEGDGVLVTEEQQSWIKTQHMTHRLRPLKRVTLPGDPVGNWCYKVSHHKWFDASVMICIVLNTIVMAMQFFGQGNVYTRCIEGANYSFSFIFTVEAIIKILAFRRAYFIDPWNRFDIFIVIGTNLGLAMLWMTGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVGLRGAVDEQANFQTFWGSMVLLLRFSTGENWNGFMYDMVAEREDCVSNPVYDPDMCGFTSHANCTPLNGCGSWSIFPYMISFTLTITYVFMNLFIGVILDGFDAASASDHDVIKQEDFARFASHWAEFDPRATCLISVQDLHDFLQTLFAPWGFGKDYQASDREVRAHIRRLKLRIFNDNKVHFK 1624          
BLAST of mRNA_E_fasciculatus_S2_contig8459.16587.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD7_9PHAE)

HSP 1 Score: 574 bits (1480), Expect = 1.940e-185
Identity = 289/322 (89.75%), Postives = 304/322 (94.41%), Query Frame = 1
Query:    4 MVKRFPGLKIVLEALIGSVQGVLNVAAVCFVFYIIFAILCVNYFKGALMSCQGDAFDALPGEVASFLEVPVSWSEMSSGQREWFGPLSNVSDAFSGDGFSGSSSTTIGGNLSTSGVEYCDAITGGLWPDAAGCCTAWPTSAEEAPTSFEVCECLGLTWAETIPQQFDNVAVSLLALFEISTTEAWTAVTYAAVDAAGLDMQPIRDHVVARVWLFILFMLVGAYLVMNLFVGVIVDNFKKMKARAEEGGLLVTGHQRLWIKTQLIMRRLRPMKRPQPPPDRLGLLCFRLINLPWFDPAVMVCIVLNTVVLAMDYFGQSDLYTR 969
            +VKRFPGLK+VLEALIGSVQGV NVAAVCF+FYIIFAILCVNYFKG LMSCQGDAFDALPGEV SFLE P+ WS+MSSGQREWFGPLSNVS+AFSGDGFS S    IGGNLSTSGVEYCD ITGGLWPDAAGCC+AWPTSAEEAPTS+EVCECLGL+WAETIPQQFDNVAVSLL LFEISTTEAWT+VTYAAVDA+G+ MQPIRDHV+ARVWLFILFML+GAYLVMNLFVGVIVDNFKKMKARAEEGGLLVTGHQRLWIKTQLIMRRLRPMKR QPPPDRLG LCFRLIN PWFD AVMVCIVLNTVVLAM YFGQS+LYTR
Sbjct: 1225 IVKRFPGLKLVLEALIGSVQGVFNVAAVCFLFYIIFAILCVNYFKGLLMSCQGDAFDALPGEVVSFLEDPLPWSDMSSGQREWFGPLSNVSEAFSGDGFSSS----IGGNLSTSGVEYCDVITGGLWPDAAGCCSAWPTSAEEAPTSYEVCECLGLSWAETIPQQFDNVAVSLLTLFEISTTEAWTSVTYAAVDASGVGMQPIRDHVMARVWLFILFMLLGAYLVMNLFVGVIVDNFKKMKARAEEGGLLVTGHQRLWIKTQLIMRRLRPMKRIQPPPDRLGSLCFRLINFPWFDSAVMVCIVLNTVVLAMKYFGQSNLYTR 1542          
BLAST of mRNA_E_fasciculatus_S2_contig8459.16587.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QWF6_9STRA)

HSP 1 Score: 465 bits (1196), Expect = 5.630e-143
Identity = 280/674 (41.54%), Postives = 387/674 (57.42%), Query Frame = 1
Query:    1 RMVKRFPGLKIVLEALIGSVQGVLNVAAVCFVFYIIFAILCVNYFKGALMSCQGDAFDAL--------PGEVASFLEVPVSWSEMSSGQREWFGPLSNVSDAFSGDGFSGSSSTTIGGNLSTSGVEYCD-----------AITGGLWPDAAGCCTAWPTSAEEA--PTSFEVCECLGLTWA-------ETIPQQFDNVAVSLLALFEISTTEAWTAVTYAAVDAAGLDMQPIRDHVVARVWLFILFMLVGAYLVMNLFVGVIVDNFKKMKARAEEGGLLVTGHQRLWIKTQLIMRRLRPMKRPQPPPDRLGLLCFRLINLPWFDPAVMVCIVLNTVVLAMDYFGQSDLYTRVLGVLNYLFYALFTLEALAKILALRWAYFKDPWNRFDFFIVLGSTAGLVSLLFLGSNYGS--IITVIRTFRVGRVLRLVRGLGPMAQLFQTLLMTLPSLVNVGALLFLLFFIFAAMGVQLYAKVGLEGALNAQANFRSFWDTMVLLLRFSTGENWNGFMYDVA--AERDGCRSDPEYDPDVCGFTSHDNC------------IAIDGCGSWTIYPYMISFTFLITFVFLNLFIGVILDGFDTAKEESEDFITEEDFARFAEHWSSFDPHATCLISVRDLHSFLQTLFEPWGFGAHHQASNRELRHKVRRLDLFVFDNNKVHFK 1890
            RM+ R PGLK+++ A+  S+  VLNV AVC +F++IF+I+ V   KG L SCQGD F  +        P E + FL  P  W   +           N++ AF+ +      ST    ++ +  +E  D           A  G   PD        P S  +   PTS +VCECLG TW          + Q FDNV  S+LA FEIS+TE W  + Y A D  G+ MQP  +        F++FMLVG YLVMNLFVGVI+D+F +M+  AE     +T  Q+ W+KTQ I  R++P K+   P D  G  C  ++    F+  +M  IVLNT+V+ M  FG S  +   L   N  F  +FT+E + K  A+ W YF D WNRFDF IV+G+  GL++    G   G+  I TVIRTFR+GR+ RLV G   + QLF TLL+T+P LVN+G LL LL+FIF+ M VQL+A VG  G  +  ANFR FW   + LLRFSTGENWNGFM+D+A   + + C  +P Y+  VCG+ S D              + + GCG+  + P+++ F  ++ +VFLNLFIG+IL+GFDTA +E++  I  EDF +F+ HW+ +DP AT  I++  L+ F+QTL+ PWGFG +  A+++E+R K+  LDL    +  VHFK
Sbjct: 1041 RMINRAPGLKLIVNAMFASIPDVLNVGAVCTLFFLIFSIVGVTLLKGQLRSCQGDHFSNVIDGADFIYPDEYSGFLYEPFKWDPSNK----------NLTAAFNRN------STLFPSDIDSKKLECLDQEGNTRCCVPNAFAGD--PDELESYHRVPHSKWDTVKPTSRDVCECLGGTWDWVGCDDDSCLQQLFDNVGFSMLAFFEISSTEGWVDLMYYAQDTRGIGMQPATNENKYMSIFFLVFMLVGCYLVMNLFVGVIIDHFNEMRKEAEGDLTYLTEEQQAWVKTQQIAIRMKPKKKIFKPGDFFGDFCHGIVLHKSFEHIIMSAIVLNTLVMMMSSFGDSTSWATFLESANMFFAVVFTIEMIMKQAAMHWLYFDDSWNRFDFLIVMGTLVGLIAKAASGGEGGAQGITTVIRTFRIGRIFRLVNGAESLNQLFNTLLLTIPGLVNIGMLLMLLYFIFSVMAVQLFATVGYNGDYSPDANFRDFWTAFMTLLRFSTGENWNGFMHDLADGPDPETCNPNPTYNSTVCGYASRDESRCNAAFEGEDWSVDVGGCGNKVVIPFLVIFQLMVGYVFLNLFIGIILEGFDTA-DETKRSIKPEDFEKFSAHWADYDPQATYYINISTLNEFVQTLYAPWGFGDY-VATDQEVRAKISELDLKTTKDGMVHFK 1694          
BLAST of mRNA_E_fasciculatus_S2_contig8459.16587.1 vs.
Match: Hypothetical (protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CSS8_9STRA)

HSP 1 Score: 442 bits (1138), Expect = 6.300e-141
Identity = 248/634 (39.12%), Postives = 357/634 (56.31%), Query Frame = 1
Query:    4 MVKRFPGLKIVLEALIGSVQGVLNVAAVCFVFYIIFAILCVNYFKGALMSCQGDAFDALPGEVASFLEVPVSWSEMSSGQREWFGPLSNVSDAFSGDGFSGSSSTTIGGNLSTSGVEYCDAITGGLWPDAAGCCTAWPTSAEEAPTSFEVCECLGLTWAETIPQQFDNVAVSLLALFEISTTEAWTAVTYAAVDAAGLDMQPIRDHVVARVWLFILFMLVGAYLVMNLFVGVIVDNFKKMKARAEEGGLLVTGHQRLWIKTQLIMRRLRPMKRPQPPPDRLGLLCFRL-INLPWFDPAVMVCIVLNTVVLAMDYFGQSDLYTRVLGVLNYLFYALFTLEALAKILALRWAYFKDPWNRFDFFIVLGSTAGLVSLLFLGSNYGSIITVIRTFRVGRVLRLVRGLGPMAQLFQTLLMTLPSLVNVGALLFLLFFIFAAMGVQLYAKVGLEGALNAQANFRSFWDTMVLLLRFSTGENWNGFMYDVAAER----DGCRSDPEYDPDVCGFTSHDNCIAIDGCGSWTIYPYMISFTFLITFVFLNLFIGVILDGFDTAKEESEDFITEEDFARFAEHWSSFDPHATCLISVRDLHSFLQTLFEPWGFGAHHQASNRELRHKVRRLDLFVFDNNKVHFK 1890
            ++ R PGL++V+ AL  S++ ++NV  VC +F++IF I+ VNYFKG  ++CQGD FD L       +E PV W+ + S  + WF       D F  D            N+    ++Y                      + + PTS  VC   G  W E +PQ F+N+  ++  LFE+STTE W  + YA VDA  LDMQPIRD        F++FM+VG++ VMNLFVGV++DNF  MK R  +  +L+T  Q+ W+KT+ IM +++PM++ + P  ++   C+RL +N   F+  +M CI+LNTV++AM YFG+   Y+  + V NY+F  +FT+EA  K++AL W YF D WN FDF IV+G+ AGL+  +    N GS+ T++RTFR+G                                       +A MGVQLYA V L   LN  A+F+ FW   V L+R  TGE+WN  MYD+A E     D    D  +  ++CGF+  ++C+ + GCG+   +P+ ISFT  +TFVFLNLFI VIL+GF  + +E    ++E+ F  FA  WS FDP ATC I    L SF+Q L EP GFG    AS  +L+ ++ +L L +++ N+VHFK
Sbjct:  252 VISRRPGLRLVVNALFSSMKAIMNVLFVCVLFFMIFGIVGVNYFKGRFLACQGDVFDGLETAQQQLVEAPVKWTALPSEHQAWFTGSQTYRDEFYNDD-----------NVGEYELKY----------------------SLKRPTSKVVCAYFGADWEEVVPQNFNNIMAAMGTLFEMSTTEGWVDIMYAGVDATDLDMQPIRDIGFGWTLFFMVFMVVGSFFVMNLFVGVVIDNFNTMKERLGDN-VLLTDAQKEWVKTREIMLKIKPMRKKEVPHGQVREFCYRLCVNNQPFEVVIMACIILNTVIMAMTYFGEPAEYSFGIEVANYVFAGVFTIEAAIKLIALHWEYFHDGWNVFDFLIVIGTNAGLLVKVAFQINIGSMATIVRTFRIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAVMGVQLYAPVKLGEFLNEHAHFQDFWTAFVTLMRSCTGESWNMIMYDLADETNCDPDLSDKDWSHKANMCGFSDAEDCVPLTGCGAAHAFPFFISFTLFVTFVFLNLFIAVILEGFGESGDEESMRLSEDHFRAFATKWSEFDPKATCFIKTSQLFSFIQVLDEPMGFGEDFVASTEQLQFRIAKLGLPIYEGNRVHFK 851          
BLAST of mRNA_E_fasciculatus_S2_contig8459.16587.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRX9_PYTOL)

HSP 1 Score: 455 bits (1171), Expect = 4.110e-140
Identity = 266/629 (42.29%), Postives = 359/629 (57.07%), Query Frame = 1
Query:    1 RMVKRFPGLKIVLEALIGSVQGVLNVAAVCFVFYIIFAILCVNYFKGALMSCQGDAFDALPGEVASFLEVPVSWSEMSSGQREWFGPLSNVSDAFSGDGFSGSSSTTIGGNLSTSGVEYCDAITGGLWPDAAGCCTAWPTSAEEAPTSFEVCECLGLTWAETIPQQFDNVAVSLLALFEISTTEAWTAVTYAAVDAAGLDMQPIRDHVVARVWLFILFMLVGAYLVMNLFVGVIVDNFKKMKARAEEGGLLVTGHQRLWIKTQLIMRRLRPMKRPQPPPDRLGLLCFRLINLPWFDPAVMVCIVLNTVVLAMDYFGQSDLYTRVLGVLNYLFYALFTLEALAKILALRWAYFKDPWNRFDFFIVLGSTAGLVSLLFLGSNYGSIITVIRTFRVGRVLRLVRGLGPMAQLFQTLLMTLPSLVNVGALLFLLFFIFAAMGVQLYAKVGLEGALNAQANFRSFWDTMVLLLRFSTGENWNGFMYDVAAERDGCRSDPEYDPDVCGFTSHDNCIAIDGCGSWTIYPYMISFTFLITFVFLNLFIGVILDGFDTAKEESEDFITEEDFARFAEHWSSFDPHATCLISVRDLHSFLQTLFEPWGFGAHHQASNRELRHKVRRLDLFVFDNNKVHF 1887
            RM++R PGLK+V+ +LI S+  +LNV  VC + ++IF+I+ VN  KG L SC+G+AFDAL G     +  P  W +M   +  WF    N S A                       E   +IT                  +E  TS  +CE LG  W  TI Q FDNV       FE++TTE W  +  A VDA  +DMQPI ++     + FI F+LVG + VM LFVGV+++NF KMK + + G  L++  QR W+     M  LRP+++ + P +      FRL   P F+  +  CIVLNTV +AM YFG+ DLY + +   NY+F  +FT EA  KI  L   Y+KD WNRFDF IVLGS  GL+     GS+ G++ T  R FRVGR+ RL++    + QLF TLL+TLPSLVN+G LLFL+FFI+AAMGVQL+AKV     +    NF++    MV L+R +TGE WN  MY++A+  D C  DP YDP +CGF +  NC+A++GCGS   + Y+ SFT L+TF+ LN+FI V+L+GF   K+  +  +    +  F   WS FDP AT  I    L +FL+ L  P GF    + S +E+   V  LDL VF  NKV F
Sbjct:  924 RMIQRNPGLKLVVSSLIASIPQILNVIMVCVLVFLIFSIVAVNNLKGRLYSCRGEAFDALSGTQQDLITYPRLWDDMRKTEHTWF----NFSSA-----------------------EILQSITN-----------------QEDLTSRLMCELLGAQWGNTISQSFDNVLRGCQTFFEMTTTEGWVTIMLAGVDATEVDMQPIPNYREGWAFFFIAFILVGTFFVMQLFVGVVIENFNKMKEKLD-GTYLLSAAQREWLIINECMLNLRPIRKMKTPQNHFRRKMFRLARNPNFEIGIAGCIVLNTVFMAMHYFGEEDLYRKTIEFSNYVFALIFTCEAAIKITGLGHYYWKDAWNRFDFVIVLGSFIGLLYQWAGGSSVGALATSFRGFRVGRLFRLIQSAPSLRQLFNTLLITLPSLVNIGGLLFLVFFIYAAMGVQLFAKVKFRDLITPTTNFQTIERAMVTLIRCATGERWNDVMYELASTED-CVEDPTYDPTMCGFNNSPNCVALNGCGSPVAFIYLYSFTLLVTFILLNIFIAVVLEGFANEKDRMDGILLPHHYESFVNTWSLFDPEATGFIDWYVLPNFLEALDPPMGFDKSTKPSTKEIMTFVELLDLPVFRKNKVFF 1506          
BLAST of mRNA_E_fasciculatus_S2_contig8459.16587.1 vs.
Match: Uncharacterized (protein n=7 Tax=Phytophthora TaxID=4783 RepID=G4YKH5_PHYSP)

HSP 1 Score: 451 bits (1160), Expect = 2.470e-139
Identity = 256/631 (40.57%), Postives = 363/631 (57.53%), Query Frame = 1
Query:    1 RMVKRFPGLKIVLEALIGSVQGVLNVAAVCFVFYIIFAILCVNYFKGALMSCQGDAFDALPGEVASFLEVPVSWSEMSSGQREWF--GPLSNVSDAFSGDGFSGSSSTTIGGNLSTSGVEYCDAITGGLWPDAAGCCTAWPTSAEEAPTSFEVCECLGLTWAETIPQQFDNVAVSLLALFEISTTEAWTAVTYAAVDAAGLDMQPIRDHVVARVWLFILFMLVGAYLVMNLFVGVIVDNFKKMKARAEEGGLLVTGHQRLWIKTQLIMRRLRPMKRPQPPPDRLGLLCFRLINLPWFDPAVMVCIVLNTVVLAMDYFGQSDLYTRVLGVLNYLFYALFTLEALAKILALRWAYFKDPWNRFDFFIVLGSTAGLVSLLFLGSNYGSIITVIRTFRVGRVLRLVRGLGPMAQLFQTLLMTLPSLVNVGALLFLLFFIFAAMGVQLYAKVGLEGALNAQANFRSFWDTMVLLLRFSTGENWNGFMYDVAAERDGCRSDPEYDPDVCGFTSHDNCIAIDGCGSWTIYPYMISFTFLITFVFLNLFIGVILDGFDTAKEESEDFITEEDFARFAEHWSSFDPHATCLISVRDLHSFLQTLFEPWGFGAHHQASNRELRHKVRRLDLFVFDNNKVHF 1887
            RM+ R PGLK+V+ +LI S+  ++NV  VC + + IF+IL V+  KG   SCQGD FDAL      F+  P +W+ ++  ++ WF   P   V   F                                             S+ E  TS ++C+ LG TW +TIPQ FDNV   +   FE++TTE W  +   +VDA  +DMQPI +H     + FI F+LVG + VM LFVGV+++NF KMK + + G  L++  QR W+     M  LRP++R + P +      FR+   P  +  +  C++LNT  +AMDYFG+ DLY   L  LNY F A+F LEA+ KI+ L   Y+KD WN FDF +VLG+  G++  +F GS+ G+  + +R+FRVGR+ RLV     + QLF TLL+TLPSL N+G LLFL+FFI+AAMGVQL+AKV     +   ANF+S    M+ L+R +TGE WN  MY++A + D C SDP YDP+ CG +S  +CI ++GCGS   + Y+ SFT L+TF+ LN+FI VIL+GF   K+  +  +  + +  F  +WS  DP AT  +    L  FL TL  P G G   + ++ E++  V  LD+ ++  NKV F
Sbjct:  821 RMINRNPGLKLVVSSLIASIPQIVNVIMVCLLVFXIFSILAVSNLKGTFYSCQGDVFDALTTAQQEFIVSPRAWTNLTIAEQNWFDNSPAEIVQRVF---------------------------------------------SSGERLTSRDMCQLLGATWTKTIPQNFDNVIHGIQTFFEMTTTEGWVTIMLTSVDATQIDMQPIPNHHERWSFFFISFILVGTFFVMQLFVGVVIENFNKMKEKLD-GTYLLSHIQREWLNINEAMLNLRPVRRLKAPLNLTRRTLFRIALSPTLELMITGCVLLNTAFMAMDYFGEEDLYEAGLNYLNYFFSAVFALEAVLKIIGLGKYYWKDRWNVFDFIVVLGALFGVIYQMFGGSSVGAAASTVRSFRVGRLFRLVHSAPSLRQLFNTLLITLPSLANIGGLLFLVFFIYAAMGVQLFAKVKFGELITPTANFQSLLKAMITLVRCATGERWNDMMYELANQED-CISDPPYDPNSCGISSDADCIPLNGCGSPVAFVYLYSFTLLVTFILLNIFIAVILEGFAKEKDREDGVLLPQHYEAFVNNWSKLDPEATGFLEWHVLPYFLTTLEPPMGLGTMLRPTSNEIQDFVAYLDVPIYRGNKVFF 1404          
BLAST of mRNA_E_fasciculatus_S2_contig8459.16587.1 vs.
Match: Voltage-gated (Ion Channel (VIC) Superfamily n=15 Tax=Phytophthora TaxID=4783 RepID=D0MY98_PHYIT)

HSP 1 Score: 445 bits (1145), Expect = 3.810e-137
Identity = 248/629 (39.43%), Postives = 367/629 (58.35%), Query Frame = 1
Query:    1 RMVKRFPGLKIVLEALIGSVQGVLNVAAVCFVFYIIFAILCVNYFKGALMSCQGDAFDALPGEVASFLEVPVSWSEMSSGQREWFGPLSNVSDAFSGDGFSGSSSTTIGGNLSTSGVEYCDAITGGLWPDAAGCCTAWPTSAEEAPTSFEVCECLGLTWAETIPQQFDNVAVSLLALFEISTTEAWTAVTYAAVDAAGLDMQPIRDHVVARVWLFILFMLVGAYLVMNLFVGVIVDNFKKMKARAEEGGLLVTGHQRLWIKTQLIMRRLRPMKRPQPPPDRLGLLCFRLINLPWFDPAVMVCIVLNTVVLAMDYFGQSDLYTRVLGVLNYLFYALFTLEALAKILALRWAYFKDPWNRFDFFIVLGSTAGLVSLLFLGSNYGSIITVIRTFRVGRVLRLVRGLGPMAQLFQTLLMTLPSLVNVGALLFLLFFIFAAMGVQLYAKVGLEGALNAQANFRSFWDTMVLLLRFSTGENWNGFMYDVAAERDGCRSDPEYDPDVCGFTSHDNCIAIDGCGSWTIYPYMISFTFLITFVFLNLFIGVILDGFDTAKEESEDFITEEDFARFAEHWSSFDPHATCLISVRDLHSFLQTLFEPWGFGAHHQASNRELRHKVRRLDLFVFDNNKVHF 1887
            RM+ R PGLK+V+ +LI S+  ++NV  VC + ++IF+IL VN  KG   SCQG+ F AL     +F+  P  W+ ++  ++ WF                  S+  +  NLS+ G                              TS  +C   G  W +TIPQ FDNV   +   FE++TTE W  +   +VDA  +DMQPI +H  +  + FI F+LVG + VM LFVGV+++NF  MK + + G   ++  QR W+     M  LRP+++ + P        FR+   P  +  ++ C++LNTV +AMDYFG+ DLY   L  LNY F  +F LEA+ KI+ L   Y+K+PWN FDF +VLG+  G++  +F GS+ G+  + +R+FRVGR+ RLV     + QLF TLL+TLPSL N+G LLFL+FFI+AAMGVQL+AK+     + + ANF+S    M+ L+R +TGE WN  MY++A ++D C  DP YDP+ CG +S  +C+ ++GCGS   + Y+ SFT L+TF+ LN+FI VIL+GF   K+  +  +  + +  F + W  FDP AT  +    L SF+ TL  P G G + ++S+++++  V  LD+ +F +NKV F
Sbjct:  825 RMINRNPGLKLVVSSLIASIPQIVNVIMVCLLVFMIFSILAVNNLKGKFYSCQGNVFAALSSAQQAFIASPRPWTNLTVAEQTWFNH----------------STAEVISNLSSDGPL----------------------------TSRAICNLFGAAWDKTIPQNFDNVIHGIQTFFEMTTTEGWVTIMLTSVDATEIDMQPIPNHHESWAFFFICFILVGTFFVMQLFVGVVIENFNNMKEKLD-GTFHLSQIQREWLTINDAMLNLRPVRKLKTPRHTTRRALFRIALSPTLELLIIGCVLLNTVFMAMDYFGEEDLYETGLNYLNYFFSGIFALEAVVKIIGLGKYYWKEPWNIFDFIVVLGTLFGVIYQMFGGSSIGTAASTVRSFRVGRLFRLVHSAPSLRQLFNTLLITLPSLANIGGLLFLVFFIYAAMGVQLFAKIKFGDLITSTANFQSLLAAMITLVRCATGERWNDVMYELANQKD-CVPDPPYDPNSCGISSAVDCVPLNGCGSPVAFVYLYSFTLLVTFILLNIFIAVILEGFAKEKDRQDGVLLPQHYETFVKKWCQFDPEATGFLEWHLLPSFVATLDPPMGVGTNLRSSSKDIQVFVAYLDVPIFRDNKVFF 1407          
BLAST of mRNA_E_fasciculatus_S2_contig8459.16587.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6S1_PYTIN)

HSP 1 Score: 445 bits (1144), Expect = 5.890e-136
Identity = 254/629 (40.38%), Postives = 362/629 (57.55%), Query Frame = 1
Query:    1 RMVKRFPGLKIVLEALIGSVQGVLNVAAVCFVFYIIFAILCVNYFKGALMSCQGDAFDALPGEVASFLEVPVSWSEMSSGQREWFGPLSNVSDAFSGDGFSGSSSTTIGGNLSTSGVEYCDAITGGLWPDAAGCCTAWPTSAEEAPTSFEVCECLGLTWAETIPQQFDNVAVSLLALFEISTTEAWTAVTYAAVDAAGLDMQPIRDHVVARVWLFILFMLVGAYLVMNLFVGVIVDNFKKMKARAEEGGLLVTGHQRLWIKTQLIMRRLRPMKRPQPPPDRLGLLCFRLINLPWFDPAVMVCIVLNTVVLAMDYFGQSDLYTRVLGVLNYLFYALFTLEALAKILALRWAYFKDPWNRFDFFIVLGSTAGLVSLLFLGSNYGSIITVIRTFRVGRVLRLVRGLGPMAQLFQTLLMTLPSLVNVGALLFLLFFIFAAMGVQLYAKVGLEGALNAQANFRSFWDTMVLLLRFSTGENWNGFMYDVAAERDGCRSDPEYDPDVCGFTSHDNCIAIDGCGSWTIYPYMISFTFLITFVFLNLFIGVILDGFDTAKEESEDFITEEDFARFAEHWSSFDPHATCLISVRDLHSFLQTLFEPWGFGAHHQASNRELRHKVRRLDLFVFDNNKVHF 1887
            RM+ R PGL++V+ +LI S+  ++NV  VC + + +F+IL VN  KG L SCQGDAFDAL       +  P  W++++  ++ WF   ++V+ A+S                                             A+   TS  +C   G +W +TIPQ FDNV       FE++TTE W  +  A VDA  +DMQPI ++     + FI F+LVG + VM LFVGV++DNF +MK + E G  L++  QR W+     M  LRPM++ + P +R   + F L     F+  ++ CIVLNT ++A+ YFG+ DLY + +   NY F  +F LEA  K+  L   Y+KD WN FDF +VLGS  G++     GS+ G++ T IR+FRVGR+ RLV+    + QLF TLL+TLPSLVN+G LLFL+FFI+AAMGVQL+AKV     +   ANF+S    MV L+R +TGE WN  MY++A + D C  DP+YDP +CGF +   C+ ++GCGS   + YM SFT +++F+ LN+FI VIL+GF   K+ +E  +  + +  F   WS FDP AT  I    L  FL+ L  P GF    + S +++ +  + LDL +F   KV F
Sbjct:  996 RMINRNPGLRLVVSSLIASIPQLINVIMVCLLVFFVFSILAVNNLKGKLYSCQGDAFDALSTAQQHLITYPRLWADLAPDEKTWFN--TSVAAAYSS------------------------------------------ILAQTDVTSRVLCGFFGASWGKTIPQSFDNVLYGCQTFFELTTTEGWVTIMLAGVDATKIDMQPIPNYREEWAFFFITFILVGTFFVMQLFVGVVIDNFNRMKEKLE-GTHLLSVTQREWLLINEAMLNLRPMRKLKIPQERFRRMMFSLARNSTFELVIVGCIVLNTTIMALHYFGEDDLYGKAIEFTNYFFALVFALEAAIKVYGLGHYYWKDRWNIFDFVLVLGSFLGMLYQWVGGSSVGTVATSIRSFRVGRLFRLVQSAPSLRQLFNTLLITLPSLVNIGGLLFLVFFIYAAMGVQLFAKVKFGELITRTANFQSITRAMVTLVRCATGERWNDMMYELATQSD-CTPDPDYDPHMCGFNNTLGCVDLNGCGSPVAFIYMYSFTLIVSFILLNIFIAVILEGFSNEKDRTEGILLPQHYENFVTTWSMFDPEATGFIDWHVLPRFLEALEPPLGFHPSCKPSRKQIEYFAQGLDLPIFRGTKVFF 1578          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8459.16587.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Similar0.000e+083.78to sodium channel, voltage-gated, type IX, alpha i... [more]
Uncharacterized1.160e-27262.46protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Voltage3.020e-27064.23Gated Calcium/Sodium Channel subunit alpha n=1 Tax... [more]
Uncharacterized1.940e-18589.75protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Hypothetical5.630e-14341.54protein (Fragment) n=1 Tax=Triparma pacifica TaxID... [more]
Hypothetical6.300e-14139.12protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486... [more]
Uncharacterized4.110e-14042.29protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Uncharacterized2.470e-13940.57protein n=7 Tax=Phytophthora TaxID=4783 RepID=G4YK... [more]
Voltage-gated3.810e-13739.43Ion Channel (VIC) Superfamily n=15 Tax=Phytophthor... [more]
Uncharacterized5.890e-13640.38protein n=1 Tax=Pythium insidiosum TaxID=114742 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8459contigE_fasciculatus_S2_contig8459:356..6083 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score1042.3
Seed ortholog evalue8.9e-302
Seed eggNOG ortholog2880.D8LI93
Model size1890
KEGG koko:K04851,ko:K04857
KEGG TC1.A.1.11.1,1.A.1.11.2,1.A.1.11.20,1.A.1.11.21
KEGG Pathwayko04010,ko04020,ko04022,ko04024,ko04218,ko04260,ko04261,ko04270,ko04530,ko04713,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04911,ko04912,ko04921,ko04924,ko04925,ko04927,ko04930,ko04934,ko04973,ko05010,ko05031,ko05410,ko05412,ko05414,map04010,map04020,map04022,map04024,map04218,map04260,map04261,map04270,map04530,map04713,map04723,map04724,map04725,map04726,map04727,map04728,map04911,map04912,map04921,map04924,map04925,map04927,map04930,map04934,map04973,map05010,map05031,map05410,map05412,map05414
Hectar predicted targeting categorysignal anchor
Exons8
EggNOG free text desc.membrane depolarization during action potential
EggNOG OGsKOG2301@1,KOG2301@2759
Cds size1887
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04040
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8459.16587.1prot_E_fasciculatus_S2_contig8459.16587.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8459 356..6080 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842504.6825798-CDS-E_fasciculatus_S2_contig8459:355..4931696842504.6825798-CDS-E_fasciculatus_S2_contig8459:355..493Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8459 356..493 -
1696842504.6939883-CDS-E_fasciculatus_S2_contig8459:1094..12691696842504.6939883-CDS-E_fasciculatus_S2_contig8459:1094..1269Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8459 1095..1269 -
1696842504.7053266-CDS-E_fasciculatus_S2_contig8459:1846..20911696842504.7053266-CDS-E_fasciculatus_S2_contig8459:1846..2091Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8459 1847..2091 -
1696842504.7143703-CDS-E_fasciculatus_S2_contig8459:2611..29141696842504.7143703-CDS-E_fasciculatus_S2_contig8459:2611..2914Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8459 2612..2914 -
1696842504.7236853-CDS-E_fasciculatus_S2_contig8459:3155..32161696842504.7236853-CDS-E_fasciculatus_S2_contig8459:3155..3216Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8459 3156..3216 -
1696842504.7341807-CDS-E_fasciculatus_S2_contig8459:4335..45831696842504.7341807-CDS-E_fasciculatus_S2_contig8459:4335..4583Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8459 4336..4583 -
1696842504.7461421-CDS-E_fasciculatus_S2_contig8459:4900..51701696842504.7461421-CDS-E_fasciculatus_S2_contig8459:4900..5170Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8459 4901..5170 -
1696842504.7582886-CDS-E_fasciculatus_S2_contig8459:5633..60801696842504.7582886-CDS-E_fasciculatus_S2_contig8459:5633..6080Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8459 5634..6080 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842504.7682025-UTR-E_fasciculatus_S2_contig8459:6080..60831696842504.7682025-UTR-E_fasciculatus_S2_contig8459:6080..6083Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8459 6081..6083 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8459.16587.1

>prot_E_fasciculatus_S2_contig8459.16587.1 ID=prot_E_fasciculatus_S2_contig8459.16587.1|Name=mRNA_E_fasciculatus_S2_contig8459.16587.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=629bp
MVKRFPGLKIVLEALIGSVQGVLNVAAVCFVFYIIFAILCVNYFKGALMS
CQGDAFDALPGEVASFLEVPVSWSEMSSGQREWFGPLSNVSDAFSGDGFS
GSSSTTIGGNLSTSGVEYCDAITGGLWPDAAGCCTAWPTSAEEAPTSFEV
CECLGLTWAETIPQQFDNVAVSLLALFEISTTEAWTAVTYAAVDAAGLDM
QPIRDHVVARVWLFILFMLVGAYLVMNLFVGVIVDNFKKMKARAEEGGLL
VTGHQRLWIKTQLIMRRLRPMKRPQPPPDRLGLLCFRLINLPWFDPAVMV
CIVLNTVVLAMDYFGQSDLYTRVLGVLNYLFYALFTLEALAKILALRWAY
FKDPWNRFDFFIVLGSTAGLVSLLFLGSNYGSIITVIRTFRVGRVLRLVR
GLGPMAQLFQTLLMTLPSLVNVGALLFLLFFIFAAMGVQLYAKVGLEGAL
NAQANFRSFWDTMVLLLRFSTGENWNGFMYDVAAERDGCRSDPEYDPDVC
GFTSHDNCIAIDGCGSWTIYPYMISFTFLITFVFLNLFIGVILDGFDTAK
EESEDFITEEDFARFAEHWSSFDPHATCLISVRDLHSFLQTLFEPWGFGA
HHQASNRELRHKVRRLDLFVFDNNKVHFK
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mRNA from alignment at E_fasciculatus_S2_contig8459:356..6083-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8459.16587.1 ID=mRNA_E_fasciculatus_S2_contig8459.16587.1|Name=mRNA_E_fasciculatus_S2_contig8459.16587.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5728bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8459:356..6083- (Ectocarpus fasciculatus EfasUO2)
AGGATGGTCAAGCGGTTTCCTGGGCTCAAGATCGTCCTCGAGGCCCTCAT CGGGTCGGTCCAGGGCGTGCTGAACGTGGCGGCGGTGTGCTTCGTGTTCT ACATCATCTTCGCCATCCTGTGCGTGAACTACTTCAAGGGCGCCCTCATG TCCTGCCAGGGGGACGCCTTCGACGCTCTCCCCGGGGAGGTGGCGTCCTT CCTCGAGGTCCCGGTGTCCTGGTCCGAGATGTCATCCGGGCAGCGGGAGT GGTTCGGCCCCCTGAGCAACGTCTCGGACGCCTTCTCTGGGGACGGTTTT AGCGGCAGCAGCAGCACCACCATCGGCGGTAACCTTTCGACCTCGGGGGT AGAGTACTGCGACGCGATCACCGGCGGCTTGTGGCCGGATGCCGCGGGCT GCTGCACCGCGTGGCCGACGTCGGCTGAAGAAGCCCCGACCAGCTTTGAG GTATCTACTGTTCTGTGAGGGGTGTTCGGCGCAGGGCGGACTATAGCGTC GGCGTGACGTGTGTGTGCTTTGAAAGCCCTTCTTGGAGGTGTTTGTTGCA CTGGTACAAGGTGCCCCCGTAGACAGTGGTGGTTGATTATTGCCTTGGCT GCATCACCCTAACCTGGAAATGCCTCAAGAGCATTTACTCGAGAGGGGTG GGCGGCCCGTCCCTATGAGACATGATGGCACTCGAAAGATCGCGAGCGAC AAGCTTTGAACGCCGGTCGTGTCACCAAAAAAAGGCAATGCTGTGACAAG TCGAAGACGGTAGAGACTCATCACACGCCAACCAACGGAACAACGTCGCG GTTGCGGGGTAGGTACTCCCTCGCAACACCAACACCCGGCACGCACGCCA CGTTCCACGAAGAAAAAGAAGTTTGGTTTGCCGCGCACGCCTCTTTTTTC TTCCTTGTTGCAGGTCTGCGAGTGCCTCGGACTGACGTGGGCGGAGACCA TCCCGCAGCAGTTCGACAACGTCGCAGTGTCCCTCCTGGCGCTGTTCGAG ATCTCCACGACTGAGGCGTGGACGGCGGTGACGTACGCGGCGGTGGACGC GGCGGGGCTGGACATGCAGCCGATCCGAGACCACGTGGTAGCAAGGGTGT GGTTGTTCATCCTCTTTATGCTGGTCGGCGCGTACCTCGTCATGAACCTC TTTGTCGGGGTTATCGTCGACAACTTCAAGAAGGTGGAGGCTGGCAACAG GCAGCGTGCGCCGTGTACAGTAGGAACTCGAAGAGCCAGAAACAAAAACA AGCAGCGCGTGGTGTCTCGTGTGTGTTCCATGTCGCGCTGTTTTTCAAGT CCCTCTCTGTTTCTTTTTCTCTCCCTCGCCCCCCCTCTGTCTCCTGTCTT ACGTGTGTTTGTCTCGCGAAAGGACACGACCGTCAAAGCCCACGTCGCCC AATTTCTCAGCTAGGTGCCCCGCTCCGCATCCGCCGCGTCGCACATCCTC TGTCTGACCGTATCTCTGATCGCTGCAACTATTGCATTGCCGCTATTTAG ATGAAAGCGCGAGCGGAGGAGGGCGGCCTGCTGGTGACGGGACACCAGCG CTTGTGGATCAAGACGCAGCTGATCATGCGCCGCCTGAGGCCGATGAAGC GCCCGCAGCCCCCTCCAGACCGTCTCGGATTGCTGTGCTTCCGGCTGATA AACTTGCCGTGGTTCGACCCGGCGGTGATGGTGTGCATCGTCCTGAACAC CGTAGTCTTGGCCATGGACTACTTCGGCCAGAGCGACCTGTACACAAGGT GGGGAAGCGCCGCGGTAGTCCGTCTGTCGTTTTTTTTTTTGTCATCTCCG TTTGCCTTTTTGAGGCAATTTTTCCGTGTGTAACTAGCTAGTGTTGCAGT GTGTGGCAGCAGGTCTACCAGTGTTGCTCTTTGTTTGTTTTTTTGTTTCG TCTCTACTATTATAAATAGTTGAGCTCTTGTGCCAGTAGTCCTGGGTGGA CACACACGCGCGCGCGAGACGCGATGATGCGGTGTGTGCGCGTGGCGTAT CTGAGTTGTCGCCAACAAAATCACCCCCGGCCAACCAACTACTTGGTTCA TTCTGATTCCCTGGTAGAATAGCACCAAACAAGACGTGCTGTTTGAAAGC AAGCTCAGGCTTGGTTGGTAGGGTTTGGGCGGCGCGTTTTTCGCGGAAAT TTGGAGCGCGACCTCGGCAAGTTGGGTGCAGGTTTGTGAAGACCTGCCAC CGCAGTTCTGTCGGGCTTTCATCCTTCTTTGGAAAATATTGGTGAGACGA AAGAGCGCGCCGGCCAGGAGTGCGCGCCGGATGTGCAAACGTGTTGCGAC GAGTGAGCCTTTTCCACGGCGCGCCAATCAAGAACGTGTCCGTGTGATTT TTGGCGGTTTGTTTTGTTTTGATACGCAGGGTGCGGGTAAGCAGGCAGGC AGGCAAGCAAGCAAGTAGACCGTTGAGAGAGAGTCCGCGGTATCTTTATT ATCACTTTGGAAATGTCCATCGATAGCAACTTTTTCACCGTTTCAACCAA CGTAGCTTTTCACCATGTCAACGTTTGAGATCGAGTGAGTCTTCCTTCAC ATGCGCTGACCATTATTTTCGTTACGAATACCCCCCCCCCCCCCCCCCCC CCCCCCCCAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCTCGTTTGG GCCCCCCCCCCCCCCACCCCCCTGCTGCTTTTCTTTTTTTTNNNNNNNNN NGTTCTCCCTCCCTGGCGCTGACCATTTTTTTCTCTAAGAACCCCCCCCT CCCCCCCCCCCCTTCCAACAACAACCCACCCCCTCCGCCCACCACCCGGT ACGTTGCGTTGGACACGCACCTCACAACGCCCGTTGCTGCTGTTCTGTTT ACTGCTCCGTCCTTCAGGGTCCTGGGGGTATTGAACTACCTGTTTTACGC CCTGTTCACCTTGGAGGCTCTCGCGAAGGTGCGGACATAGACCAAACGGC GGTGCGTACGTGCTGTTGTTGCCCAACGAGGGGCCAAGAATGTAGTATCT TCGCTGGTGCCGCTCGTCCTCCTCCTCCTCCTCCTCCAATTGTACCAATC CTTCGCGGAGAGATATCTCAAAGATGGGGCGATCAGGTCAAAACCCTCCC ACACTTTGTATTATTTTCGCGCCACAACCGGCCCGGAACGCCTGCCTACT CCCCGTCTCGTCTCGTCAGATCCTAGCACTCCGGTGGGCGTACTTTAAAG ACCCGTGGAACCGGTTCGACTTCTTCATCGTGCTGGGCAGCACCGCGGGC TTAGTGTCGCTCTTGTTTCTCGGCTCAAACTACGGGAGCATCATCACCGT GATCCGCACCTTCAGGGTAGGCCGCGTCCTCCGGCTCGTTCGGGGGCTGG GGCCGATGGCCCAGCTGTTCCAGACGCTGCTCATGACGCTGCCCAGCCTG GTCAACGTGGGGGCTCTGCTCTTCTTGCTCTTCTTCATCTTTGCGGCCAT GGGCGTTCAGCTCTACGCCAAGGTTTGTTTGTGTGTGTGCGTGAGAGAGA GTGGGGAAGGAGGAGAACGGGGCGGCGAGCCGTTCCCACGAGGGATCCTG CCGTACCGGACCCGGTCTCAAACGCGATTGAGTCGTTTCGCGGATCGAGT TCTTGCTGCTCTCTGCTTCCGCTGCTGTGGTTCTGGCCGGGAAAAAGAAA GATAGACAGAGGCCGAGAGAGAGAGAGAGAAAGAGAGAGGGAGAAGGGGG GGCCATGTTCCTTGTTGTGGTTGTTTTATTGCGCGGCCGGTTCAGCATAG GTGCGCGCCAGCACCAGCCCAACAACATGCTGCTCGAGTTGAAATGCGCG CGGGGCAAGGGCACGAGGGTCAAACAGCGTAGGTAGGTAGGGTAGGTAGG TAGGAAGGTGGGTGGCCTGTAGCCTGTTGTGGCACAGCAGTAAGTGACGC CCTACGTTCACCTCCCAACTCACCCGCTTGCCCGAGCCCATCACCACAAA AAAATATAATTTTGCACCTGAACAAAAAAAATATACCACCAGGTGGGACT CGAGGGGGCCCTGAACGCGCAGGCCAACTTCCGCTCATTCTGGGACACGA TGGTCTTGCTGCTACGGTTTAGCACGGGCGAGAACTGGAACGGCTTCATG TACGACGTAGCTGCGGAGAGGGACGGGTGCCGGTCTGATCCCGAGTATGA CCCCGACGTATGCGGGTTCACGAGCCACGATAACTGCATCGCGATCGACG GGTGCGGCAGCTGGACCATCTACCCATACATGATCAGGTGCGTGTGTGTG TGTGTGTGTGTGTAAGTGTCTCTGTGCTTTGCCCGCGAAAGAGGCATGTT TGTATCGATGTGCTGTGCCTGAGTTAAAATGAGTACTGACTGGCGCCTTT GTACATGTTGTTGCGGTACAGAGCACGGCTTTTTCTTCAACACAATGACG GGATGTCCGTGAAGCCTTTCGTACGGTACGGGCCAGAACGTGTGGTCGTA GGTGGAACTAGGCAACCACCACACCAGCAATATCAACCCGGCCCAACAAC TATAGCTACATGGTCTCCTGTGGCAATGGGGACGGCCACCTCCCATGTCT CTCGTGTTGCTTTCGCCGTCATGCTCAGGTACACATGGACTTCGTGGAAG AACGGGTACCGTTGGCCTAACCCGGCCCTGGTTACCCCGCTCTACCCCGC CTCAACCAGCCAACACCTGTCACTCAAGCTGTGTGGCTGGTTCCCTGTAG ATACCACCTTTTGCATCAGAATTCGTCCCGCTCACCCCCACGGCCTCGCT CAGCGGTTTCGCTCACGTCGGTATCGCTGCCGCCCCCTCCCCGCCCTCTT CCTCTTCCGTGCAGCTTCACGTTTTTGATTACCTTCGTGTTCCTGAACCT GTTCATCGGGGTGATCCTGGACGGCTTCGACACCGCCAAGGAGGAGTCGG AGGACTTCATCACGGAGGAGGACTTCGCGAGGTTCGCGGAGCACTGGTCC AGCTTTGACCCCCACGCGACCTGCCTCATCTCCGTGCGGGTGGGATGTCG TTTAGCTTTGCTGTCTCGGGGGCTGGCATGTTTGCTCTCGTTGTGGTGGT GGTGGTGGTGTTGTAGTGACGTGGTGGTGGGCACAGTGATATTGGTGTAG ACTTTTGTTTCGGCTTTTTAAAATATCCCGCCTCCCTCAAGCGGGTACAA TGTTGTACTTTCCCGCATTTTTTCAAGTACCGTTACTCTTCTTGTGACAA ACGACTGGTATTGTCAGACGGGTGGAGGTATGGCACGAAGTTTGTTTTCC CGCCAATTTGGAACGATCCGAACAAATCCCTTGGGGTCATGACGTATGGC GAACGGACTGAGCAAACAGGCGGACGGACAGACAGACAGACAGACAGACA GACGGGTAAGACACGATGGTGAGGACGTCGTGACTGGCAGGAGAGCGCCC CGTATTTTTTTGTTTGTCGTTTTTTTTCTATTTAGGTGAACTGTTCTTCG GATCTAGGTACCACGTCGATTGCCGAAACCACACACACAACCTCGATGCC ACGCGCGTTTCCCACGAACGGAATCTTGGTTTATTTGTGTGTGTGCGCGT TTGTTTGGTTCGTTTCGTCTCTCCCGAAACCGTCGCACAGGACCTGCACT CATTTTTGCAGACGCTGTTCGAGCCGTGGGGGTTCGGGGCGCACCACCAG GCCAGCAACAGAGAGCTACGGCACAAGGTCAGGCGGTTGGATCTGTTCGT CTTCGACAACAACAAGGTTCACTTCAAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8459:356..6083-

>mRNA_E_fasciculatus_S2_contig8459.16587.1 ID=mRNA_E_fasciculatus_S2_contig8459.16587.1|Name=mRNA_E_fasciculatus_S2_contig8459.16587.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1887bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8459:356..6083- (Ectocarpus fasciculatus EfasUO2)
ATGGTCAAGCGGTTTCCTGGGCTCAAGATCGTCCTCGAGGCCCTCATCGG
GTCGGTCCAGGGCGTGCTGAACGTGGCGGCGGTGTGCTTCGTGTTCTACA
TCATCTTCGCCATCCTGTGCGTGAACTACTTCAAGGGCGCCCTCATGTCC
TGCCAGGGGGACGCCTTCGACGCTCTCCCCGGGGAGGTGGCGTCCTTCCT
CGAGGTCCCGGTGTCCTGGTCCGAGATGTCATCCGGGCAGCGGGAGTGGT
TCGGCCCCCTGAGCAACGTCTCGGACGCCTTCTCTGGGGACGGTTTTAGC
GGCAGCAGCAGCACCACCATCGGCGGTAACCTTTCGACCTCGGGGGTAGA
GTACTGCGACGCGATCACCGGCGGCTTGTGGCCGGATGCCGCGGGCTGCT
GCACCGCGTGGCCGACGTCGGCTGAAGAAGCCCCGACCAGCTTTGAGGTC
TGCGAGTGCCTCGGACTGACGTGGGCGGAGACCATCCCGCAGCAGTTCGA
CAACGTCGCAGTGTCCCTCCTGGCGCTGTTCGAGATCTCCACGACTGAGG
CGTGGACGGCGGTGACGTACGCGGCGGTGGACGCGGCGGGGCTGGACATG
CAGCCGATCCGAGACCACGTGGTAGCAAGGGTGTGGTTGTTCATCCTCTT
TATGCTGGTCGGCGCGTACCTCGTCATGAACCTCTTTGTCGGGGTTATCG
TCGACAACTTCAAGAAGATGAAAGCGCGAGCGGAGGAGGGCGGCCTGCTG
GTGACGGGACACCAGCGCTTGTGGATCAAGACGCAGCTGATCATGCGCCG
CCTGAGGCCGATGAAGCGCCCGCAGCCCCCTCCAGACCGTCTCGGATTGC
TGTGCTTCCGGCTGATAAACTTGCCGTGGTTCGACCCGGCGGTGATGGTG
TGCATCGTCCTGAACACCGTAGTCTTGGCCATGGACTACTTCGGCCAGAG
CGACCTGTACACAAGGGTCCTGGGGGTATTGAACTACCTGTTTTACGCCC
TGTTCACCTTGGAGGCTCTCGCGAAGATCCTAGCACTCCGGTGGGCGTAC
TTTAAAGACCCGTGGAACCGGTTCGACTTCTTCATCGTGCTGGGCAGCAC
CGCGGGCTTAGTGTCGCTCTTGTTTCTCGGCTCAAACTACGGGAGCATCA
TCACCGTGATCCGCACCTTCAGGGTAGGCCGCGTCCTCCGGCTCGTTCGG
GGGCTGGGGCCGATGGCCCAGCTGTTCCAGACGCTGCTCATGACGCTGCC
CAGCCTGGTCAACGTGGGGGCTCTGCTCTTCTTGCTCTTCTTCATCTTTG
CGGCCATGGGCGTTCAGCTCTACGCCAAGGTGGGACTCGAGGGGGCCCTG
AACGCGCAGGCCAACTTCCGCTCATTCTGGGACACGATGGTCTTGCTGCT
ACGGTTTAGCACGGGCGAGAACTGGAACGGCTTCATGTACGACGTAGCTG
CGGAGAGGGACGGGTGCCGGTCTGATCCCGAGTATGACCCCGACGTATGC
GGGTTCACGAGCCACGATAACTGCATCGCGATCGACGGGTGCGGCAGCTG
GACCATCTACCCATACATGATCAGCTTCACGTTTTTGATTACCTTCGTGT
TCCTGAACCTGTTCATCGGGGTGATCCTGGACGGCTTCGACACCGCCAAG
GAGGAGTCGGAGGACTTCATCACGGAGGAGGACTTCGCGAGGTTCGCGGA
GCACTGGTCCAGCTTTGACCCCCACGCGACCTGCCTCATCTCCGTGCGGG
ACCTGCACTCATTTTTGCAGACGCTGTTCGAGCCGTGGGGGTTCGGGGCG
CACCACCAGGCCAGCAACAGAGAGCTACGGCACAAGGTCAGGCGGTTGGA
TCTGTTCGTCTTCGACAACAACAAGGTTCACTTCAAG
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