mRNA_E_fasciculatus_S2_contig8398.16530.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8398.16530.1
Unique NamemRNA_E_fasciculatus_S2_contig8398.16530.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: J (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNL6_ECTSI)

HSP 1 Score: 1026 bits (2652), Expect = 0.000e+0
Identity = 672/755 (89.01%), Postives = 688/755 (91.13%), Query Frame = 1
Query:  427 VEHSVQSKRKPQXXXXXXXXXXXXXXXXXLDLLPQNLPLGAAVGLXXXXXXXXXXXXTNARDQLRNGPDITVKXXXXXXXXXXXXXFRRSALATALSTDERVGLCIGARTDAPARCAGQVRDRRISPPNXXXXXXXXXXXXXXXXLASTPPSLSAEDRVALCQGAAEESPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAAPAHCAKAAFRAGADRHLAAVXXXXXXXXXXXXXXAAAPRQIPADVRVETCIGALSTSPALCLAASGPLELQAQPDGGAICPLDPEAGRRPRRGVDHRLAARLCRDAIDDKPARCARAAPFRMSDADVEVLCAAGGRPGGEETADCAAAGLMIGFSGASAASLCRGASSGAPVACAETAAHRIGEAGRLAXXXXXXXXXXXXXXNSLSGAGAPSASEVEECQEAVPRPSRLHIMDLGHEGETLFPDQPMHATLEVRDQWGGKILSDSSTVVRASIALRGSNGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGSDNKHAGPANVPLAAARVTVEETEHGAIIRRCRAVFSRLACPWPVKGEGTSGEWVSDVGVETGAPQQLRPSSSVATEAVSAVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPPWERLGVDRDTSGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELIGDAYEWMVSSSKVL 2691
            VEHSVQSKRKP                  LDLLPQNLPL AAVG XXXXXXXXXXXXTNARDQLRNGPDITV+XXXXXXXXXXXXXFRRSALATALSTDERV LC+GARTDAPARCAGQVRDRRISPPN XXXXXXXXXXXXXXXLASTPPSLSAEDRV LCQGAAEESPT   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SSAAPAHCAKAAFRAGADR LAAVXXXXXXXXXXXXXX AAPRQIPADVRVETC             ASGP ELQ QPD  A+CPLDPEAGRRPRRGVDHRLAAR+CRDA+DDKPA CARAAP RMSD+DVEVLCAA G+PGGEETADCAAAGLMIGFSGASAASLCRGASSGAPVACAETAAHRIGEAGRLAXXXXXXXXXXXXXXNS+SGAGAPSASEVEEC+EAVPRPSRLHI DLGHEGETLFPDQPMHATLEV DQWGGKI  DSSTVVRAS+ALRGSNGAVANAHGRFNTSD GVVHFSHLSFSGSGNLTLQFFIDG+D+K  G ANVPLAAARV VEETEHGAI+RRCRAVFSRLACPWPVKGEG SGEWVSDVG+ TGAP Q+RPSSSVATEAVS VSGGAGAAWYVMTCQQVLEENGINVAYV SPSTEPL ALLWYHPGIETLETGAGLPTRDQP WERLGVDRD SGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFEL+GDAYEWMVSSSK L
Sbjct:   12 VEHSVQSKRKPHLVVDVCKGASNVAPAECLDLLPQNLPLEAAVGXXXXXXXXXXXXXTNARDQLRNGPDITVRXXXXXXXXXXXXXFRRSALATALSTDERVELCVGARTDAPARCAGQVRDRRISPPNKXXXXXXXXXXXXXXXLASTPPSLSAEDRVGLCQGAAEESPTTPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSAAPAHCAKAAFRAGADRRLAAVXXXXXXXXXXXXXXXAAPRQIPADVRVETCXXXXXXXXXXXXXASGPRELQGQPDWEAVCPLDPEAGRRPRRGVDHRLAARVCRDALDDKPALCARAAPLRMSDSDVEVLCAADGQPGGEETADCAAAGLMIGFSGASAASLCRGASSGAPVACAETAAHRIGEAGRLAXXXXXXXXXXXXXXNSVSGAGAPSASEVEECREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWGGKIHKDSSTVVRASVALRGSNGAVANAHGRFNTSDVGVVHFSHLSFSGSGNLTLQFFIDGNDSKDVGAANVPLAAARVIVEETEHGAILRRCRAVFSRLACPWPVKGEGASGEWVSDVGMGTGAPHQVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVYSPSTEPLLALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELVGDAYEWMVSSSKAL 766          
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: J (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJW3_9STRA)

HSP 1 Score: 191 bits (486), Expect = 3.160e-47
Identity = 123/327 (37.61%), Postives = 167/327 (51.07%), Query Frame = 1
Query: 1741 GAGAPSASEVEECQEAVPRPSRLHIMDLGHEGE--TLFPDQPMHATLEVRDQWGGKILSDSSTVVRASIALRGSNGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGSDNKHAGPANVPLAAARVTVEETEHGAIIRRCRAVFSRLACPWPVKGEGTSGEWVSDVGV-ETGAPQQLRPSSSVATEAVSAVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPPWERLGVDRDTSGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELIGDAYEWMVSSSKVLGENNQGV 2712
            G GA +A ++E+C+ A P  + + + +L H GE   L+    + A LEV+DQWG  +  DS T VRAS+A RGSNGA     GR N + DGVV FSHL+FS  GNLTL+F + G+           LA+A + V ET+  A  R C AV   L CP             SD       A  +L  +  +       +S      W  + C   L   G  VA    P     +A +WY P +E L TG G+PT      ERLG+    SG ++RRAYYR+SL WHPDRW R+   + RAQ VFEL+ +AY  + + +K+     +  
Sbjct:  469 GGGA-TARQIEDCRGAAPVHTSIGVRELKHAGEGGVLYTGARVEAVLEVKDQWGRFMEWDSGTYVRASLAPRGSNGAFIGGAGRVNATVDGVVRFSHLTFSAPGNLTLRFDVGGAH----------LASALLRVVETKEAAFARACGAVVRALRCP-------------SDAAAARRAAAAELNAADEIFALVPPPLS------WNAIVCGGALRNQGFRVA----PGWRR-AAWVWYTPAVEALATGRGVPTPLMTALERLGLGEGASGGDVRRAYYRESLRWHPDRWARHPALAERAQAVFELVSEAYAELRAGAKLAATGQESA 760          
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUI0_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.580e-35
Identity = 106/315 (33.65%), Postives = 152/315 (48.25%), Query Frame = 1
Query: 1762 SEVEECQEAVPRPSRLHIMDLGHE---GETLFPDQPMHATLEVRDQWGGKILSDSSTVVRASIALRGSNGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGSDNKHAGPANVPLAAARVTVEETEHGAIIRRC-RAVFSRLACPWPVKGEGTS----GEWVSDVGVETGAPQQLRPSSSVATEAVSAVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPPWERLGVDRDTSGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELIGDAYEWMVSSS 2682
            S VE C+ A   PS + I+ +  +   G+ +F    +H TL+V DQ+G  +L D+ T+V A++    S GA+     R N S  GVV   +L FS  G   L F I G+         V +    V+  E +      +C +  F++L    P     +S    G+    + V+        PSS    EA+S             +C ++LEE G+ V      S       +WY P +E L+TG GLPT     W RLG+    S R++R+AYYRQSL+WHPDRW  Y +H   AQD FE+I +AY  +VS S
Sbjct:    7 SLVEYCRTATATPSGVQILRMWWDTDRGDGIFAKSNVHITLQVLDQFGTPMLGDNETIVSATLDSTTSQGAMLEGI-RSNVSVAGVVELHYLRFSQDGEFDLHFGIGGN--------RVQMMRVVVSPHEDDRFGPTGKCGQEFFAKLNSFAPSFAVNSSQLVAGQDHDPLRVQEKVSYMTWPSS---LEAMS-------------SCSRILEEAGVRVT-----SGWGGDLWVWYRPAMEALDTGVGLPTASMDFWTRLGLSSTASARDVRKAYYRQSLVWHPDRWASYPLHRRLAQDAFEVISEAYRQLVSLS 291          
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUF7_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.120e-33
Identity = 132/434 (30.41%), Postives = 190/434 (43.78%), Query Frame = 1
Query: 1450 PARCARAAPFRMSDADVEVLCAAGGRPGGEETADCAAAGLMIGFSGASAASLCRGASSGAPVACAETAAHRIGEAGRLAXXXXXXXXXXXXXXNSLSGAGAPS---------------ASEVEECQEAVPRPSRLHIMDLGHE---GETLFPDQPMHATLEVRDQWGGKILSDSSTVVRASIALRGSNGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGSDNKHAGPANVPLAAARVTVEETEHGAIIRRC-RAVFSRLACPWPVKGEGTS----GEWVSDVGVETGAPQQLRPSSSVATEAVSAVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPPWERLGVDRDTSGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELIGDAYEWMVSSS 2682
            P  CA  AP+  SD+D+  LC    R      +DCA +        +  A LC  ++S AP  CA  +   +     +A               S + A  P                 S VE C+ A   PS + I+ +  +   G+ +F    +H TL+V DQ+G  +L D+ T+V A++    S GA+     R N S  GVV   +L FS  G   L F I G+         V +    V+  E +      +C +  F++L    P     +S    G+    + V+        PSS    EA+S             +C ++LEE G+ V      S       +WY P +E L+TG GLPT     W RLG+    S R++R+AYYRQSL+WHPDRW  Y +H   AQD FE+I +AY  +VS S
Sbjct:  255 PMDCALTAPYGFSDSDIIALC----RHADPRASDCARS-APPSLPASIRARLCARSTSTAPARCAVASPFSMHRP--MANAQAHKAEEPVVALCSQAAAPTPGHCASFLARQQGRELVPSLVEYCRTATATPSGVQILRMWWDTDRGDGIFAKSNVHITLQVLDQFGTPMLGDNETIVSATLDSTTSQGAMLEGI-RSNVSVAGVVELHYLRFSQDGEFDLHFGIGGN--------RVQMMRVVVSPHEDDRFGPTGKCGQEFFAKLNSFAPSFAVNSSQLVAGQDHDPLRVQEKVSYMTWPSS---LEAMS-------------SCSRILEEAGVRVT-----SGWGGDLWVWYRPAMEALDTGVGLPTASMDFWTRLGLSSTASARDVRKAYYRQSLVWHPDRWASYPLHRRLAQDAFEVISEAYRQLVSLS 651          
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: J (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XN52_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.040e-10
Identity = 88/328 (26.83%), Postives = 140/328 (42.68%), Query Frame = 1
Query: 1747 GAPSASEVEECQEAVPRPSRLHIMDLGHEGETLFPDQPMHATLEVRDQWGGKILSDSSTVVRASIALRGSNGAVANAHGRFNTSDDGVVHF-SHLSF-SGSGNLTLQFFID-GSDNKHAGPANVPLA------AARVTV-EETEHGAIIRRCRAVFSRLACPWPVKGEGTSGEWVSDVGVETGAPQQLRPSSSVATEAVSAVSG--GAGAAWY--VMTCQQVLEENGINVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPPWERLGVDRDTSGRELRRAYYRQSLLWHPDRWVRYAIHS--ARAQDVFELIGDAYEWMVSSS 2682
            GA + S V EC+  VP P+ L I  + +    L P   +   L V DQ+G ++ S +   +R S+             G    + D V+H  +H    +GS   T  FFI+ G      GPA  P         AR+ + E+ +     RRCRA+F++L C                     GA +  +P  S A + V  V       +  Y  V+ C+    E+   +  + + ST  + A+  +H     L T A +P+     W  LG+D   +  ++R AY+R+SL WHPD+W   +  S   RA  V+  +  AY  ++  +
Sbjct:  575 GAVTRSLVLECRAVVPVPASLEIAQVSYRCRQLVPKCRLSVQLRVHDQFGVEMQSWTGGYLRVSVTP---------TEGTAPEAGDRVLHGPTHAPIINGSAAFTDIFFIEPGEFVVTFGPAAAPTLLSITEKVARIRIHEDAQERLRSRRCRALFAQLEC---------------------GADRTEQPGPS-ANDTVGEVFHLFELPSRHYLDVLGCEGFWLEHSGGMRVLGATSTRFVLAI--HHASYRFL-TNARVPSAGMSAWACLGLDEGANRSQIRHAYHRKSLEWHPDKWSGASTRSLQGRAAQVYARVTLAYNELLQDA 868          
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: J (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQH3_GLOUD)

HSP 1 Score: 69.3 bits (168), Expect = 2.520e-8
Identity = 69/317 (21.77%), Postives = 130/317 (41.01%), Query Frame = 1
Query: 1768 VEECQEAVPRPSRLHIMDLGHEGETLFPDQPMHATLEVRDQWGGKILSDSSTVVR--ASIALRGSNGAVANAHGRFNTSD------DGVVHFSHLSFSGSGNLTLQFFIDGSDNKHAGPANVPLAAARVTVEETEHGAI-IRRCRAVFSRLACPWPVKGEGTSGEWVSDVGVETGAPQQLRPSSSVATEAVSAVSGGAGAAWYV--MTCQQVLEENGINVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPPWERLGVDRDTSGRELRRAYYRQSLLWHPDRW--VRYAIHSARAQDVFELIGDAYEWMVSS 2679
            ++EC+ AV  P+   I  + ++   L P+  +  +L V DQ+G ++ + +   V   A+     SN     + GR           +G   F  +SF+ +G   + F    + +       +     R+ + E +   +  +RC+A+F+R  C                   +T  P  +   S+                +Y+  M+C+    E+   + +  + S   L  +   H       T A +P  +  PW  LG+    +  ++RRAY+R+SL WHPD+W      +  A+A+ ++ LI  AY  + +S
Sbjct:  404 IQECRYAVATPASTEIAQVSYQCRELIPNCLITISLRVLDQFGEEMPAWTGGYVHIAATPTTDTSNTEHMTSEGRILVGQSHALIVNGTAVFKDISFAEAGEFIITFRPPSASSSSLIGVFLEEKIVRIRIHEDKLAQLRTKRCKALFARFQCSRD----------------DTADPFHVLDLSN---------------RFYLDAMSCEAFWHEHTGGLRFQGTTSQRLLYVI---HRASYHFLTDASIPHAEMSPWACLGLASSANRSQIRRAYHRKSLEWHPDKWSSADTIMLRAQAEKIYALITHAYHVLFNS 686          
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: Hypothetical (protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAI0_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.760e-8
Identity = 84/372 (22.58%), Postives = 132/372 (35.48%), Query Frame = 1
Query: 1756 SASEVEECQEAVPRPSRLHIMDLGHE--GETLFPDQPMHATLEVRDQWGGKILSDSSTVV-RASIALRGSNGAV--ANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFID-------------GSDNKHAGPANVPLAAARVTVEETEHGAIIRRCRAVFSRLACPWPVKGEGTSGEWVSDVGVETGAPQQLRPSSSVATEAVSAVSGGAGAAWYVMTCQQVLEENGINVAYVSSPSTEPLSALLW--YHPGIETLETGAGLPTRDQPPWERLGVDRDTSG------------------------------------------RELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELIGDAYEWMVSSSK 2685
            S  +V +C         + +  +  E  G  +   +      E+ DQ+G   L      +  AS+      GAV         N    G++  + L  S SG +  + FI+             G  N  +GP  V L   R+TV E    +    C  +  +  CP       T  EW S+         ++R  S V+    + +            C + +    +N       S   +   LW  Y  G+++L TG G+P  +  P ERLG+  +  G                                          +E+RRAYYR+SL WHPDRW    +++   Q  FELI +AY  + +  K
Sbjct:   23 SVDDVNKCVHTKQEIKTIRVKKILTEDNGIEIMAGKRFSLHFELLDQYGRTFLDPHQEFLFSASLNNNNPQGAVLWGIRSNYTNPKIPGMLELNSLVISQSGEVDFKIFINMRTGTSGTSSGGSGKGNAVSGPKLVDLF--RLTVLEDPVVSSALPCIYLLQQTTCPL---NSNTVSEWESEF-------PRIRSYSPVSNYLRNVL------------CAEAMTGMHVN-------SFVGVQGDLWAEYRLGVDSLWTGVGMPRLEMSPMERLGLSTNAEGLIVSDHPDNDKXXXXXXXXXXXXXXXXSNALGNTRKRERAMQKEIRRAYYRKSLQWHPDRWAGMGMYALPVQAAFELINEAYNSLTNEEK 363          
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: DnaJ (family protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI11_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.210e-7
Identity = 39/109 (35.78%), Postives = 58/109 (53.21%), Query Frame = 1
Query: 2341 AWYVMT--CQQVLEENGINVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPPWERLGVDRDTSGRELRRAYYRQSLLWHPDRWVRYAIH-SARAQDVFELIGDA 2658
            AW+++   C+  L + G+ +  + SP        L    G   L  G G+PT +    E LGV+ + +  +LR+AYYR SL WHPDRWV +     ++A DVF+ I  A
Sbjct: 1092 AWWLLARGCEDELADIGVQL--LRSPQPIAHGVFLHIKSGPAKLLAGIGVPTEEMSAEEILGVEANATSSQLRKAYYRASLEWHPDRWVSFHPDLQSQAADVFQRIATA 1198          
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Match: J (domain-containing protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YAI0_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 8.930e-5
Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 2506 WERLGVDRDTSGRELRRAYYRQSLLWHPDRWVRYAIH---SARAQDVFELIGDAYE 2664
            +ERLGV R+ + R++R AY R +L WHPDRW   + +    A A+D+F+L+ ++YE
Sbjct:    4 YERLGVPRNATDRQIRSAYKRLALKWHPDRWTNNSANPQEQASAEDIFKLLAESYE 59          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8398.16530.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
J0.000e+089.01domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
J3.160e-4737.61domain-containing protein n=1 Tax=Tribonema minus ... [more]
Hypothetical2.580e-3533.65protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical1.120e-3330.41protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
J1.040e-1026.83domain-containing protein n=1 Tax=Pythium brassicu... [more]
J2.520e-821.77domain-containing protein n=1 Tax=Globisporangium ... [more]
Hypothetical2.760e-822.58protein n=2 Tax=Spumella elongata TaxID=89044 RepI... [more]
DnaJ2.210e-735.78family protein n=1 Tax=Hondaea fermentalgiana TaxI... [more]
J8.930e-544.64domain-containing protein (Fragment) n=1 Tax=Phyto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8398contigE_fasciculatus_S2_contig8398:1510..5334 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1031.6
Seed ortholog evalue2.3e-298
Seed eggNOG ortholog2880.D7FNL6
Model size2721
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.DnaJ molecular chaperone homology domain
EggNOG OGs29M4M@1,2RUDY@2759
Ec32 ortholog descriptionDnaJ domain
Ec32 orthologEc-01_005020.1
Cds size2721
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842498.4067376-CDS-E_fasciculatus_S2_contig8398:1509..34601696842498.4067376-CDS-E_fasciculatus_S2_contig8398:1509..3460Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8398 1510..3460 -
1696842498.419581-CDS-E_fasciculatus_S2_contig8398:4016..43751696842498.419581-CDS-E_fasciculatus_S2_contig8398:4016..4375Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8398 4017..4375 -
1696842498.4330308-CDS-E_fasciculatus_S2_contig8398:4923..53341696842498.4330308-CDS-E_fasciculatus_S2_contig8398:4923..5334Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8398 4924..5334 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8398.16530.1prot_E_fasciculatus_S2_contig8398.16530.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8398 1510..5334 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8398.16530.1

>prot_E_fasciculatus_S2_contig8398.16530.1 ID=prot_E_fasciculatus_S2_contig8398.16530.1|Name=mRNA_E_fasciculatus_S2_contig8398.16530.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=907bp
MGSIPKQVRPRPGQKSRPLSKHSQRLYYYCLLACAVVVPCSCQGSLSAVK
ECSRLAPYFLTADQRVTLCGQATTTAPALCARKAHAAPRMSGSHILELCS
GAISDLPGLCVAGLSQSTARNLSPDLRVELCRGALSDAPAHCVEHSVQSK
RKPQLVVDVCKGASSVAPAECLDLLPQNLPLGAAVGLCSGAEGVGPAVCT
NARDQLRNGPDITVKLCRGASGEGPADCFRRSALATALSTDERVGLCIGA
RTDAPARCAGQVRDRRISPPNKVALCHGASSIAPATCLASTPPSLSAEDR
VALCQGAAEESPTAPTACLKTVPQDLPSASAVALCRGAADKKAAAECAKV
ARHTVGESSDALMALCQGASSAAPAHCAKAAFRAGADRHLAAVLCAESTS
LAPASCFAAAPRQIPADVRVETCIGALSTSPALCLAASGPLELQAQPDGG
AICPLDPEAGRRPRRGVDHRLAARLCRDAIDDKPARCARAAPFRMSDADV
EVLCAAGGRPGGEETADCAAAGLMIGFSGASAASLCRGASSGAPVACAET
AAHRIGEAGRLAICKGASSTAPARCANSLSGAGAPSASEVEECQEAVPRP
SRLHIMDLGHEGETLFPDQPMHATLEVRDQWGGKILSDSSTVVRASIALR
GSNGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGSDNKHAGP
ANVPLAAARVTVEETEHGAIIRRCRAVFSRLACPWPVKGEGTSGEWVSDV
GVETGAPQQLRPSSSVATEAVSAVSGGAGAAWYVMTCQQVLEENGINVAY
VSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPPWERLGVDRDTSGREL
RRAYYRQSLLWHPDRWVRYAIHSARAQDVFELIGDAYEWMVSSSKVLGEN
NQGVTS*
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mRNA from alignment at E_fasciculatus_S2_contig8398:1510..5334-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8398.16530.1 ID=mRNA_E_fasciculatus_S2_contig8398.16530.1|Name=mRNA_E_fasciculatus_S2_contig8398.16530.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3825bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8398:1510..5334- (Ectocarpus fasciculatus EfasUO2)
ATGGGGTCTATCCCGAAACAGGTACGGCCGAGGCCAGGTCAGAAGAGCAG ACCCTTGTCTAAACATAGCCAACGACTCTACTATTATTGCTTGCTGGCGT GCGCTGTTGTAGTACCATGTTCATGTCAAGGGTCGCTGAGTGCCGTCAAG GAATGTTCTCGACTTGCGCCATACTTTCTGACCGCGGATCAGAGGGTAAC TCTGTGCGGGCAGGCCACAACGACCGCCCCAGCACTTTGCGCAAGGAAGG CTCACGCGGCACCGAGAATGTCAGGCTCTCATATCCTTGAGTTATGCTCT GGGGCGATCTCCGACCTTCCAGGGCTGTGCGTGGCGGGACTGTCCCAGAG CACGGCGAGGAATCTTTCTCCAGATCTCAGGGTTGAGCTTTGCAGGGGTG CTCTTTCGGATGTAAGTCTAGGTATTGCGATGATTTGATGGTTCTGTGGC TGTACCGGATTTTCTGGGCGCAATGCTGTCGTCCCCTATGCACAACGAGC GCTACCGCACTATCTATTGTAGGTGCATAGGCGCCCGTCGATCAGAAATG TCTACGAGTCCAGGGTCATCCTCTTACTTCGTTGTTGCTACCGTCGGCAT ACGCATGCAATATGGTATTGTGTAGGATGCACTGACGTCTGTTTCGTAGC ACCCAATTGTCTTGTCACGTGCTCACGTACTTCTCGTAGAGAAATGAGCC TCGGTAATGACAACCGATGGCAACCCTTTGTTTCTGTTTGCAACCCAAAG GTAGATAGCTCTCTGTGCGCGTTCTGTTTGCAGGAGAGATGAAGCAACCG ACTTGAAAGCGCTACATAACGCCGTCATGACCGTGTCCCGCAGTCCCGCT GTTCGTGCGACGTTTCTTTTCTCCGGGCCCGTGTGTGCCACTGACATTCA TCCGCCGTTGACGCCTTCGTTCACAACTATTCCCGCCGCTCATGTCCACT TGCTCTCAGGCACCGGCGCACTGTGTAGAGCATTCTGTCCAATCCAAACG AAAGCCTCAACTGGTGGTGGACGTGTGCAAAGGAGCGTCGAGCGTAGCGC CAGCCGAGTGCCTCGATCTGTTACCGCAGAACCTTCCTCTTGGAGCAGCG GTTGGCCTTTGCAGTGGAGCTGAAGGCGTAGGGCCAGCCGTTTGTACTAA TGCTAGAGACCAACTTAGAAATGGACCAGACATCACGGTGAAGTTGTGCC GGGGTGCCAGCGGTGAAGGTCCCGCGGACTGCTTTCGTCGGTCCGCCCTC GCCACAGCGCTCTCGACAGATGAACGCGTGGGGTTGTGTATAGGAGCAAG AACGGATGCTCCGGCAAGGTGCGATCTTACGGCAGTATGCGGATACCAAG TATTGGAAACGTGAGGTTCATGCGTATGTCTAGAACCCTGAAAACATCCC AGCCAGCGTCGGAAGTCGGAATACCACTCTGTATGGCTATTCTGTATGTC ACTTGCTGACATGGAGGACCCTATTTGACACGCTACCCAACCTACCATTC TTGGCGTCTCTCATAGCTGACAAAAACTATGGCGAACTTGGAACCCTACA GCCACATCGTCTATGGCAGGAGCTAACGTCACCCTTGGCGTCGATGAAAC TGTGTGCAGCTCTGCGTAGTTTATACGCAATTCTGTCCGTATCGCGTCCA AGACAGTAATTTAGTCCTTGTCATCGACCCCATCAGTGTCACCACGAAGC TGTTTTTGCTCATCTGATCATCGCTCATACGATTCTGCGAAACAAAAAAC TCGTGCATGCCGACCCCAACAGCTGTACTCCGTTTTTCATGAACGATTCA GCTGAGCGTTCTCACGTACCACCTTCGACGAACCTTCGCCGCTATATGTA CTTATCAATGCACCCGGTTCCCAGATGCGCTGGACAAGTACGAGATCGTC GCATCAGCCCTCCCAACAAGGTAGCACTGTGTCATGGAGCTTCTAGCATT GCCCCTGCGACATGTCTTGCGTCCACGCCCCCCTCACTATCTGCGGAAGA TCGCGTGGCTCTGTGCCAGGGGGCCGCCGAGGAGAGCCCGACCGCTCCAA CCGCTTGCCTGAAAACAGTGCCGCAGGACCTTCCGTCGGCCTCTGCGGTT GCCCTTTGCCGTGGGGCCGCCGACAAGAAGGCCGCCGCCGAGTGCGCGAA GGTGGCCCGCCACACCGTCGGAGAATCTTCCGATGCGCTGATGGCACTGT GTCAGGGCGCATCATCCGCGGCCCCCGCTCACTGCGCGAAGGCGGCCTTC CGGGCGGGCGCCGACCGACACTTGGCCGCCGTGCTGTGCGCCGAATCGAC GTCGCTAGCGCCGGCGTCTTGCTTTGCTGCCGCGCCCCGCCAAATTCCGG CGGACGTCCGAGTTGAGACATGTATCGGCGCGCTGTCCACCAGCCCGGCG CTCTGCCTCGCGGCTTCCGGGCCTCTCGAGCTTCAAGCGCAGCCGGATGG GGGAGCCATATGCCCACTAGACCCTGAGGCTGGCAGACGTCCTCGGAGAG GCGTTGACCACCGGTTAGCTGCTCGGTTATGTCGAGACGCAATAGACGAC AAACCGGCACGATGCGCGCGAGCGGCGCCGTTCCGAATGAGCGACGCCGA TGTGGAGGTCCTCTGTGCGGCCGGCGGCCGGCCTGGCGGGGAAGAGACCG CAGATTGCGCAGCAGCCGGTTTGATGATCGGGTTCAGCGGCGCCAGTGCC GCCTCTCTCTGCCGCGGGGCAAGCTCGGGCGCGCCTGTCGCCTGCGCCGA GACGGCGGCGCACCGGATAGGGGAAGCCGGAAGGCTCGCGATCTGCAAGG GCGCGTCGAGCACTGCCCCCGCGCGATGTGCCAATTCTTTGTCAGGTGCG GGAGCCCCTTCCGCCTCCGAAGTTGAGGAGTGCCAGGAAGCCGTTCCCCG TCCATCGAGGCTCCACATCATGGACCTCGGGCACGAGGGCGAAACTCTGT TTCCCGACCAGCCCATGCACGCCACACTCGAGGTCCGGGATCAATGGGGG GGGAAGATCCTGTCGGACAGCTCAACGGTGGTGCGCGCTTCTATCGCCTT GCGCGGATCCAACGGTGCCGTCGCGAACGCTCATGGGCGCTTCAACACTT CAGACGACGGCGTCGTTCATTTCTCCCACCTGTCGTTCAGTGGTTCCGGA AACTTGACGCTCCAGTTCTTCATAGACGGTAGTGACAACAAGCATGCGGG ACCCGCGAACGTCCCCTTGGCTGCTGCACGAGTTACCGTGGAGGAGACGG AGCATGGCGCCATCATTCGCCGATGTAGGGCGGTGTTCAGCCGGCTTGCT TGTCCCTGGCCCGTGAAAGGCGAAGGAACGAGTGGTGAATGGGTGAGCGA CGTGGGGGTGGAAACAGGCGCGCCGCAGCAGCTGCGGCCGTCGTCGTCGG TTGCGACTGAGGCTGTTTCTGCCGTTTCAGGGGGAGCTGGCGCGGCGTGG TACGTGATGACCTGCCAGCAAGTACTGGAGGAGAACGGGATTAACGTAGC TTACGTCTCCTCCCCGAGCACAGAGCCGCTCTCGGCTTTGCTCTGGTATC ACCCCGGCATCGAGACTTTGGAAACGGGCGCAGGGTTGCCGACTCGAGAC CAACCTCCGTGGGAGCGATTAGGGGTGGATCGGGACACGAGCGGTCGCGA ACTGCGTCGAGCTTACTACCGCCAGTCGCTGCTCTGGCATCCAGACCGCT GGGTGCGGTACGCTATACACTCTGCGCGCGCTCAGGACGTGTTCGAGCTT ATAGGCGACGCGTACGAGTGGATGGTTTCTAGCTCTAAAGTTCTTGGAGA GAACAACCAAGGCGTGACGAGTTAA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8398:1510..5334-

>mRNA_E_fasciculatus_S2_contig8398.16530.1 ID=mRNA_E_fasciculatus_S2_contig8398.16530.1|Name=mRNA_E_fasciculatus_S2_contig8398.16530.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2721bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8398:1510..5334- (Ectocarpus fasciculatus EfasUO2)
ATGGGGTCTATCCCGAAACAGGTACGGCCGAGGCCAGGTCAGAAGAGCAG
ACCCTTGTCTAAACATAGCCAACGACTCTACTATTATTGCTTGCTGGCGT
GCGCTGTTGTAGTACCATGTTCATGTCAAGGGTCGCTGAGTGCCGTCAAG
GAATGTTCTCGACTTGCGCCATACTTTCTGACCGCGGATCAGAGGGTAAC
TCTGTGCGGGCAGGCCACAACGACCGCCCCAGCACTTTGCGCAAGGAAGG
CTCACGCGGCACCGAGAATGTCAGGCTCTCATATCCTTGAGTTATGCTCT
GGGGCGATCTCCGACCTTCCAGGGCTGTGCGTGGCGGGACTGTCCCAGAG
CACGGCGAGGAATCTTTCTCCAGATCTCAGGGTTGAGCTTTGCAGGGGTG
CTCTTTCGGATGCACCGGCGCACTGTGTAGAGCATTCTGTCCAATCCAAA
CGAAAGCCTCAACTGGTGGTGGACGTGTGCAAAGGAGCGTCGAGCGTAGC
GCCAGCCGAGTGCCTCGATCTGTTACCGCAGAACCTTCCTCTTGGAGCAG
CGGTTGGCCTTTGCAGTGGAGCTGAAGGCGTAGGGCCAGCCGTTTGTACT
AATGCTAGAGACCAACTTAGAAATGGACCAGACATCACGGTGAAGTTGTG
CCGGGGTGCCAGCGGTGAAGGTCCCGCGGACTGCTTTCGTCGGTCCGCCC
TCGCCACAGCGCTCTCGACAGATGAACGCGTGGGGTTGTGTATAGGAGCA
AGAACGGATGCTCCGGCAAGATGCGCTGGACAAGTACGAGATCGTCGCAT
CAGCCCTCCCAACAAGGTAGCACTGTGTCATGGAGCTTCTAGCATTGCCC
CTGCGACATGTCTTGCGTCCACGCCCCCCTCACTATCTGCGGAAGATCGC
GTGGCTCTGTGCCAGGGGGCCGCCGAGGAGAGCCCGACCGCTCCAACCGC
TTGCCTGAAAACAGTGCCGCAGGACCTTCCGTCGGCCTCTGCGGTTGCCC
TTTGCCGTGGGGCCGCCGACAAGAAGGCCGCCGCCGAGTGCGCGAAGGTG
GCCCGCCACACCGTCGGAGAATCTTCCGATGCGCTGATGGCACTGTGTCA
GGGCGCATCATCCGCGGCCCCCGCTCACTGCGCGAAGGCGGCCTTCCGGG
CGGGCGCCGACCGACACTTGGCCGCCGTGCTGTGCGCCGAATCGACGTCG
CTAGCGCCGGCGTCTTGCTTTGCTGCCGCGCCCCGCCAAATTCCGGCGGA
CGTCCGAGTTGAGACATGTATCGGCGCGCTGTCCACCAGCCCGGCGCTCT
GCCTCGCGGCTTCCGGGCCTCTCGAGCTTCAAGCGCAGCCGGATGGGGGA
GCCATATGCCCACTAGACCCTGAGGCTGGCAGACGTCCTCGGAGAGGCGT
TGACCACCGGTTAGCTGCTCGGTTATGTCGAGACGCAATAGACGACAAAC
CGGCACGATGCGCGCGAGCGGCGCCGTTCCGAATGAGCGACGCCGATGTG
GAGGTCCTCTGTGCGGCCGGCGGCCGGCCTGGCGGGGAAGAGACCGCAGA
TTGCGCAGCAGCCGGTTTGATGATCGGGTTCAGCGGCGCCAGTGCCGCCT
CTCTCTGCCGCGGGGCAAGCTCGGGCGCGCCTGTCGCCTGCGCCGAGACG
GCGGCGCACCGGATAGGGGAAGCCGGAAGGCTCGCGATCTGCAAGGGCGC
GTCGAGCACTGCCCCCGCGCGATGTGCCAATTCTTTGTCAGGTGCGGGAG
CCCCTTCCGCCTCCGAAGTTGAGGAGTGCCAGGAAGCCGTTCCCCGTCCA
TCGAGGCTCCACATCATGGACCTCGGGCACGAGGGCGAAACTCTGTTTCC
CGACCAGCCCATGCACGCCACACTCGAGGTCCGGGATCAATGGGGGGGGA
AGATCCTGTCGGACAGCTCAACGGTGGTGCGCGCTTCTATCGCCTTGCGC
GGATCCAACGGTGCCGTCGCGAACGCTCATGGGCGCTTCAACACTTCAGA
CGACGGCGTCGTTCATTTCTCCCACCTGTCGTTCAGTGGTTCCGGAAACT
TGACGCTCCAGTTCTTCATAGACGGTAGTGACAACAAGCATGCGGGACCC
GCGAACGTCCCCTTGGCTGCTGCACGAGTTACCGTGGAGGAGACGGAGCA
TGGCGCCATCATTCGCCGATGTAGGGCGGTGTTCAGCCGGCTTGCTTGTC
CCTGGCCCGTGAAAGGCGAAGGAACGAGTGGTGAATGGGTGAGCGACGTG
GGGGTGGAAACAGGCGCGCCGCAGCAGCTGCGGCCGTCGTCGTCGGTTGC
GACTGAGGCTGTTTCTGCCGTTTCAGGGGGAGCTGGCGCGGCGTGGTACG
TGATGACCTGCCAGCAAGTACTGGAGGAGAACGGGATTAACGTAGCTTAC
GTCTCCTCCCCGAGCACAGAGCCGCTCTCGGCTTTGCTCTGGTATCACCC
CGGCATCGAGACTTTGGAAACGGGCGCAGGGTTGCCGACTCGAGACCAAC
CTCCGTGGGAGCGATTAGGGGTGGATCGGGACACGAGCGGTCGCGAACTG
CGTCGAGCTTACTACCGCCAGTCGCTGCTCTGGCATCCAGACCGCTGGGT
GCGGTACGCTATACACTCTGCGCGCGCTCAGGACGTGTTCGAGCTTATAG
GCGACGCGTACGAGTGGATGGTTTCTAGCTCTAAAGTTCTTGGAGAGAAC
AACCAAGGCGTGACGAGTTAA
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