prot_E_fasciculatus_S2_contig8343.16480.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8343.16480.1
Unique Nameprot_E_fasciculatus_S2_contig8343.16480.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length324
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8343.16480.1 vs. uniprot
Match: D7FZN1_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN1_ECTSI)

HSP 1 Score: 419 bits (1076), Expect = 3.230e-138
Identity = 225/257 (87.55%), Postives = 228/257 (88.72%), Query Frame = 0
Query:   94 RPVVSTRTLAVGDESAAPGKTEGASAEGL-GVEDAREALRSLFGHDDFRDGQ--------------------------EEVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALIAAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFVSTLKGVKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAARANARLALTATATPKVAVDIANRLDIPPSNVNR 323
            R +VSTRTLAVGDESAAPGKTEGASAEGL G+EDAREALRSLFGHDDFRDGQ                          EEVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALIAAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFV TLKG+KVALFVVDEAHCISEWGHNFRPDYLRLADFAKAARANARLALTATATPKVAVDIANRLDIPPSNVNR
Sbjct:   11 RLIVSTRTLAVGDESAAPGKTEGASAEGLLGMEDAREALRSLFGHDDFRDGQAKDQHSRRWYALVYKPGLSFQTSTKEEEVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALIAAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFVRTLKGIKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAARANARLALTATATPKVAVDIANRLDIPPSNVNR 267          
BLAST of mRNA_E_fasciculatus_S2_contig8343.16480.1 vs. uniprot
Match: A0A6H5JUW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUW0_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 4.340e-79
Identity = 160/269 (59.48%), Postives = 168/269 (62.45%), Query Frame = 0
Query:  131 LRSLFGHDDFRDGQEEVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQT-------------------------------------------DALIAAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFVSTLKGVKVALFVVDEAHCISE---------------------------------WGHNFRPDYLRLADFAKAARANARLALTATATPKVAVDIANRLDIPPSNVNR 323
            L +     +     + V+  LL  ++C   FPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQ                                            D L  AGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFV TL+GVKVALFVVDEAHCISE                                 WGHNFRPDYLRLADFAKAARANARLALTA ATP+VAVDIANRLDIPPSNVNR
Sbjct:   13 LTTAMTDGNIAKNDDTVIDALL--KAC--FFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQVWYMLLNHNLFSLLSARQDIALCRGQLTVLVLLWMGLGTIAGVKDKLGPAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFVRTLQGVKVALFVVDEAHCISEGRVCCGAQRQMPLPVEAKRTSTEPVLHLLVSPQWGHNFRPDYLRLADFAKAARANARLALTAAATPQVAVDIANRLDIPPSNVNR 277          
BLAST of mRNA_E_fasciculatus_S2_contig8343.16480.1 vs. uniprot
Match: A0A835Z8G9_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G9_9STRA)

HSP 1 Score: 240 bits (613), Expect = 2.420e-69
Identity = 132/234 (56.41%), Postives = 151/234 (64.53%), Query Frame = 0
Query:  126 DAREALRSLFGHDDFRDGQEEVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALIAAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFVSTLKGV------------------------------------KVALFVVDEAHCISEWGHNFRPDYLRLADFAKAARANARLALTATATPKVAVDIANRLDIPPSNVNR 323
            D   AL+  FG+D+FRDGQEEVV  LL   S A + PTGAGKS+CYQLPG ++AR G G T+VVSPLIALMKDQ  AL A G+PCA+LDS+L+A    D Y+ +R G   LLYVSPERFNNERF S  KG                                     +VALFVVDEAHCISEWGHNFRPDYLRLA FA+AA A A LALTATATP+VA D+  RL I   +V R
Sbjct:   50 DVHAALKYYFGYDEFRDGQEEVVRLLLQQRSAAAILPTGAGKSLCYQLPGLVLARAGRGTTVVVSPLIALMKDQAQALAARGLPCARLDSSLDAAVARDAYDMVRRGRAGLLYVSPERFNNERFASAFKGALVHFARWAQLRTVERRGAAARARISSEAGLGALSKARVALFVVDEAHCISEWGHNFRPDYLRLAAFARAAGAAATLALTATATPRVAADMCARLAIAQHDVVR 283          
BLAST of mRNA_E_fasciculatus_S2_contig8343.16480.1 vs. uniprot
Match: X0SQ01_9ZZZZ (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0SQ01_9ZZZZ)

HSP 1 Score: 218 bits (555), Expect = 5.490e-66
Identity = 111/197 (56.35%), Postives = 140/197 (71.07%), Query Frame = 0
Query:  125 EDAREALRSLFGHDDFRDGQEEVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALIAAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFVSTLKGVKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAARANARLALTATATPKVAVDIANRLDIPPSNV 321
            E AR+ L+ +FG + FRDGQE VV +LL+G S   +FPTG GKS+CYQLP  ++     GLTLV+SPLIALMKDQ D L++ G P A+LDS+L   E   +++ + AG + LLYVSPER  NERF+ +L   K+AL  VDEAHCISEWGHNFRPDYL++A+ A+       LALTATATP+VA DIA    I P +V
Sbjct:   14 EHARKTLKEVFGFEGFRDGQEAVVMRLLSGRSVLAIFPTGGGKSLCYQLPSLVLD----GLTLVISPLIALMKDQLDFLVSRGAPAARLDSSLSREETLAVHDAMNAGRLKLLYVSPERLGNERFLRSLARRKIALLAVDEAHCISEWGHNFRPDYLKIAEIARQLGVERVLALTATATPQVAGDIAQGFGIAPGDV 206          
BLAST of mRNA_E_fasciculatus_S2_contig8343.16480.1 vs. uniprot
Match: A0A2E9MGE8_9BACT (RecQ family ATP-dependent DNA helicase n=3 Tax=root TaxID=1 RepID=A0A2E9MGE8_9BACT)

HSP 1 Score: 226 bits (575), Expect = 3.360e-65
Identity = 118/198 (59.60%), Postives = 139/198 (70.20%), Query Frame = 0
Query:  126 DAREALRSLFGHDDFRDGQEEVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALIAAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFVSTLKGVKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAARANARLALTATATPKVAVDIANRLDIPPSNVNR 323
            DAR AL+  F  DDFR GQ E V  LLAG S A VFPTG GKS+CYQLP  L+     GLTLVVSPLIALMKDQ DAL   G+  A+LDS+L   E   + + +R+G + LLYV+PERFNNERF   + G++++LF VDEAHCISEWGHNFRPDYL+LA FA+   A   LALTATATP+V  DI    DI P +  R
Sbjct:    4 DARAALKQHFDFDDFRPGQGEAVGHLLAGHSTAAVFPTGGGKSLCYQLPALLLP----GLTLVVSPLIALMKDQIDALQRRGIEAARLDSSLSLDEYRSVMDGVRSGQLRLLYVAPERFNNERFREAISGIRISLFAVDEAHCISEWGHNFRPDYLKLAGFARQYEAERVLALTATATPRVLDDICAGFDIRPEHAVR 197          
BLAST of mRNA_E_fasciculatus_S2_contig8343.16480.1 vs. uniprot
Match: A0A4Q6AZ83_9PROT (ATP-dependent DNA helicase RecQ n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6AZ83_9PROT)

HSP 1 Score: 217 bits (552), Expect = 6.220e-65
Identity = 108/193 (55.96%), Postives = 139/193 (72.02%), Query Frame = 0
Query:  124 VEDAREALRSLFGHDDFRDGQEEVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALIAAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFVSTLKGVKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAARANARLALTATATPKVAVDIANRLDI 316
            V  A+E L++ FGH++FR GQ +V+ ++L G+S A VFPTG+GKS+CYQLP  L+     GLTLVVSPL+ALMKDQ D+L+A G+  A+LDSTL   E       +R G + +LYV+PERF NERF   + G+ ++LF VDEAHCISEWGHNFRPDYL+L  FAK   A   LALTATATP+V +DI    ++
Sbjct:    5 VSKAQELLKTYFGHENFRAGQAQVIEQILNGKSSAAVFPTGSGKSLCYQLPALLLP----GLTLVVSPLLALMKDQIDSLLAKGIKAARLDSTLTNDEYQQTMRDVRNGVIKILYVAPERFMNERFRGAMAGINISLFAVDEAHCISEWGHNFRPDYLKLPIFAKTLGAKVVLALTATATPQVLLDIQKSFEV 193          
BLAST of mRNA_E_fasciculatus_S2_contig8343.16480.1 vs. uniprot
Match: A0A833IRD6_9GAMM (RecQ family ATP-dependent DNA helicase n=1 Tax=Alkalilimnicola sp. S0819 TaxID=2613922 RepID=A0A833IRD6_9GAMM)

HSP 1 Score: 224 bits (570), Expect = 1.900e-64
Identity = 114/191 (59.69%), Postives = 140/191 (73.30%), Query Frame = 0
Query:  128 REALRSLFGHDDFRDGQEEVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALIAAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFVSTLKGVKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAARANARLALTATATPKVAVDIANRLDIPP 318
            R+AL+  FG D FR GQ  VV  LLAG+S A VFPTG GKS+CYQLP  L+     G+TLVVSPLIALMKDQ DAL A G+   +LDS+L A E   + +++RAG++ +LYV+PERFNNERF + +   ++ALF VDEAHCISEWGHNFRPDYL+LA +A+  +A   LALTATATP+V  DI    DI P
Sbjct:    6 RDALQQYFGFDQFRPGQAPVVDHLLAGQSAAAVFPTGGGKSLCYQLPALLLP----GVTLVVSPLIALMKDQIDALAARGIAARRLDSSLSAEEYRAVMDEVRAGTLRILYVAPERFNNERFRAAIARTRIALFAVDEAHCISEWGHNFRPDYLKLAGYARELQAERVLALTATATPQVLEDICRLFDIRP 192          
BLAST of mRNA_E_fasciculatus_S2_contig8343.16480.1 vs. uniprot
Match: UPI0003A27C71 (RecQ family ATP-dependent DNA helicase n=1 Tax=Marinobacterium rhizophilum TaxID=420402 RepID=UPI0003A27C71)

HSP 1 Score: 223 bits (569), Expect = 2.390e-64
Identity = 117/194 (60.31%), Postives = 140/194 (72.16%), Query Frame = 0
Query:  127 AREALRSLFGHDDFRDGQEEVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALIAAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFVSTLKGVKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAARANARLALTATATPKVAVDIANRLDIPPSN 320
            A E L++ FG + FRDGQ+  + KLLAGES   VFPTG GKS+CYQLP  L+     GLTLVVSPLIALM+DQ  AL A G+  A+LDS+    EV +IY Q+R G + LLYV+PER  NERF+S LK +++AL  VDEAHCISEWGHNFRPDYL+LA  A+  RA   LALTATATP VA DI  +  IP +N
Sbjct:    4 ALEILKTTFGLEAFRDGQQAAIDKLLAGESVLTVFPTGGGKSLCYQLPALLIE----GLTLVVSPLIALMQDQVAALHARGIAAARLDSSRTGDEVREIYRQLRRGELKLLYVAPERLQNERFLSLLKDLRIALLAVDEAHCISEWGHNFRPDYLKLAQLAQTLRAQRVLALTATATPSVAEDICRQFGIPAAN 193          
BLAST of mRNA_E_fasciculatus_S2_contig8343.16480.1 vs. uniprot
Match: A0A3D2Z062_9BACT (RecQ family ATP-dependent DNA helicase n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A3D2Z062_9BACT)

HSP 1 Score: 223 bits (567), Expect = 5.030e-64
Identity = 115/198 (58.08%), Postives = 141/198 (71.21%), Query Frame = 0
Query:  126 DAREALRSLFGHDDFRDGQEEVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALIAAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFVSTLKGVKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAARANARLALTATATPKVAVDIANRLDIPPSNVNR 323
            D R  L+  FG DDF  GQ +VV +LLAG S A VFPTG GKS+CYQLP  ++     GLTLVVSPLIALMKDQ DAL   G+  A+LDS+L+  +   + + IR+G + LLYV+PERFNNERF   ++G+ ++LF VDEAHCISEWGHNFRPDYL+LA FA+  +A   LALTATATP+V  DI    DI P +  R
Sbjct:    4 DPRMTLKQQFGFDDFLPGQADVVERLLAGHSTAAVFPTGGGKSLCYQLPSLMLP----GLTLVVSPLIALMKDQIDALQRRGITAARLDSSLDKDQYRSVMDGIRSGQLRLLYVAPERFNNERFRQAIEGIAISLFAVDEAHCISEWGHNFRPDYLKLAGFARQFQAERILALTATATPRVLDDICAGFDIHPEHAVR 197          
BLAST of mRNA_E_fasciculatus_S2_contig8343.16480.1 vs. uniprot
Match: A0A4U0ZQ34_9DELT (ATP-dependent DNA helicase RecQ n=1 Tax=Desulforhopalus sp. IMCC35007 TaxID=2569543 RepID=A0A4U0ZQ34_9DELT)

HSP 1 Score: 212 bits (539), Expect = 6.110e-64
Identity = 108/196 (55.10%), Postives = 137/196 (69.90%), Query Frame = 0
Query:  126 DAREALRSLFGHDDFRDGQEEVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALIAAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFVSTLKGVKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAARANARLALTATATPKVAVDIANRLDIPPSNV 321
            D  + L+S FG D FR GQEEV+  LL GES A +FPTG+GKS+CYQLP  L+     GLTLV+SPLIALMKDQ D+L   G+   +LDS+L+     +    IR+G + +L+V+PER +NERF+S +KG +++L  VDEAHCIS WGHNFRPDYL+LA  AK       LALTATATP+V+ D+A   DI   NV
Sbjct:   14 DIYQTLKSHFGFDSFRSGQEEVITTLLGGESAAAIFPTGSGKSLCYQLPALLLP----GLTLVISPLIALMKDQIDSLKKQGIAAERLDSSLDEENYRNAINNIRSGQLKILFVAPERMSNERFLSIIKGQQLSLLAVDEAHCISAWGHNFRPDYLKLARVAKELCVERVLALTATATPQVSADMAEAFDIKKKNV 205          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8343.16480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZN1_ECTSI3.230e-13887.55DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JUW0_9PHAE4.340e-7959.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z8G9_9STRA2.420e-6956.41DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
X0SQ01_9ZZZZ5.490e-6656.35Helicase ATP-binding domain-containing protein (Fr... [more]
A0A2E9MGE8_9BACT3.360e-6559.60RecQ family ATP-dependent DNA helicase n=3 Tax=roo... [more]
A0A4Q6AZ83_9PROT6.220e-6555.96ATP-dependent DNA helicase RecQ n=1 Tax=Proteobact... [more]
A0A833IRD6_9GAMM1.900e-6459.69RecQ family ATP-dependent DNA helicase n=1 Tax=Alk... [more]
UPI0003A27C712.390e-6460.31RecQ family ATP-dependent DNA helicase n=1 Tax=Mar... [more]
A0A3D2Z062_9BACT5.030e-6458.08RecQ family ATP-dependent DNA helicase n=1 Tax=Can... [more]
A0A4U0ZQ34_9DELT6.110e-6455.10ATP-dependent DNA helicase RecQ n=1 Tax=Desulforho... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 136..322
e-value: 5.0E-18
score: 75.9
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 148..320
score: 19.588
NoneNo IPR availableGENE3D3.40.50.300coord: 119..322
e-value: 7.3E-68
score: 229.7
NoneNo IPR availablePANTHERPTHR13710:SF108ATP-DEPENDENT DNA HELICASE Q4coord: 95..321
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 95..321
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..323
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 142..305
e-value: 2.8E-17
score: 63.1
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 259..268
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 128..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8343contigE_fasciculatus_S2_contig8343:2496..6511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8343.16480.1mRNA_E_fasciculatus_S2_contig8343.16480.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8343 2466..6511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8343.16480.1 ID=prot_E_fasciculatus_S2_contig8343.16480.1|Name=mRNA_E_fasciculatus_S2_contig8343.16480.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=324bp
MVTHRLRIMMTLVPILSRLEGRVVAFAARYPRLNSALPTASNSARGAGTG
SSRSSSSSSSSSSSSSSSSSSSSSPFLQRRRPRPYSLAGNTGARPVVSTR
TLAVGDESAAPGKTEGASAEGLGVEDAREALRSLFGHDDFRDGQEEVVAK
LLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQT
DALIAAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFV
STLKGVKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAARANARLALTA
TATPKVAVDIANRLDIPPSNVNR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR002464DNA/RNA_helicase_DEAH_CS
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd