prot_E_fasciculatus_S2_contig834.16474.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig834.16474.1
Unique Name	prot_E_fasciculatus_S2_contig834.16474.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	178

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig834.16474.1 vs. uniprot
Match: A0A6H5L022_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L022_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 9.150e-84
Identity = 149/177 (84.18%), Postives = 159/177 (89.83%), Query Frame = 0

Query:    1 MNLLLHTLLLTVLLCLRACQAFVPSLKTPPASSQNALARAPTRSTTAHVGRRSRGQSRDASTGLTRLDMMFGRGKKKTPTLSEEDLATMAKSREEANKKIAIFLEKRRSDREARKEAEQAEQREKVANRVKAEKEEAEHNKVYIPQRLEEIEKEQAVLKDRMSAFNTKIKDKDIKDL 177
            MNLLLHTLLL+VLLCLRACQAF P LKT PASSQ+ALARAPTRS T   G RSRGQSRDA+T LTRL MMFGRG+   PTLSEEDLATMAKSREEAN+KI  FLEKRR+DR+ARKEAEQA  REKVANR+KAEKEEAEH+KVYIPQRLEEIE+EQAVLKDRMSAFNTKIKDKDI DL
Sbjct:    1 MNLLLHTLLLSVLLCLRACQAFAPLLKTFPASSQSALARAPTRSATVPAGSRSRGQSRDATTVLTRLGMMFGRGRNPPPTLSEEDLATMAKSREEANQKIENFLEKRRADRKARKEAEQAXXREKVANRMKAEKEEAEHSKVYIPQRLEEIEREQAVLKDRMSAFNTKIKDKDIGDL 177

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BLAST of mRNA_E_fasciculatus_S2_contig834.16474.1 vs. uniprot
Match: D7FRI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRI6_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 7.970e-40
Identity = 80/89 (89.89%), Postives = 86/89 (96.63%), Query Frame = 0

Query:   89 MAKSREEANKKIAIFLEKRRSDREARKEAEQAEQREKVANRVKAEKEEAEHNKVYIPQRLEEIEKEQAVLKDRMSAFNTKIKDKDIKDL 177
            MAKSREEAN KI  FLEKRR++REARKEAEQAEQREKVANR+KA+KEEAEHNKVYIPQRLEEIE+EQAVLKDRMSAFNTKIKDKDI+DL
Sbjct:    1 MAKSREEANHKIDNFLEKRRAEREARKEAEQAEQREKVANRMKAKKEEAEHNKVYIPQRLEEIEREQAVLKDRMSAFNTKIKDKDIEDL 89

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig834.16474.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig834.16474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L022_9PHAE	9.150e-84	84.18	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FRI6_ECTSI	7.970e-40	89.89	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 117..140
None	No IPR available	COILS	Coil	Coil	coord: 148..168
None	No IPR available	COILS	Coil	Coil	coord: 174..177
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..177
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..21
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..21 score: 0.937

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig834	contig	E_fasciculatus_S2_contig834:5321..9062 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig834.16474.1	mRNA_E_fasciculatus_S2_contig834.16474.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig834 4641..9062 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig834.16474.1 ID=prot_E_fasciculatus_S2_contig834.16474.1|Name=mRNA_E_fasciculatus_S2_contig834.16474.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=178bp
MNLLLHTLLLTVLLCLRACQAFVPSLKTPPASSQNALARAPTRSTTAHVG
RRSRGQSRDASTGLTRLDMMFGRGKKKTPTLSEEDLATMAKSREEANKKI
AIFLEKRRSDREARKEAEQAEQREKVANRVKAEKEEAEHNKVYIPQRLEE
IEKEQAVLKDRMSAFNTKIKDKDIKDL*