prot_E_fasciculatus_S2_contig8326.16467.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8326.16467.1
Unique Nameprot_E_fasciculatus_S2_contig8326.16467.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length253
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8326.16467.1 vs. uniprot
Match: A0A6H5KJS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJS4_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 5.510e-46
Identity = 176/227 (77.53%), Postives = 180/227 (79.30%), Query Frame = 0 
Query:   25 QGKSYLRVYPLSGETPGVTHFIGVLENLDTAQAAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGENSSGLEAGASEXXXXXXXXXXTAKGRVKFHDGSSGSGXXXXXXXXDDGTGARHHNHTGARSSRLTSNNSMSMTTGSDGGFSSSSHSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGASSPAAQSGGRVPKRGR 251
            +GKSYLRVYPLSGET GVTHFIGVLENLDTAQAA+ XXXXXXXXXX                      KGGE+SSGLEAGASE           AKGRVKFHDGSSGS   XXXXXX      RHH HTGARS+RLTSNNSMSMTTGSDGGFSSSSHS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGASSPAAQSGGR PKRGR
Sbjct:    3 KGKSYLRVYPLSGETLGVTHFIGVLENLDTAQAARQXXXXXXXXXXGPSSIGEGPISSSAASSPTAAAKGGEHSSGLEAGASEGETSSDSASSAAKGRVKFHDGSSGSSGSXXXXXXX--XXXRHHTHTGARSARLTSNNSMSMTTGSDGGFSSSSHS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGASSPAAQSGGRPPKRGR 226
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8326.16467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJS4_9PHAE5.510e-4677.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8326contigE_fasciculatus_S2_contig8326:4189..6785 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8326.16467.1mRNA_E_fasciculatus_S2_contig8326.16467.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8326 4189..6785 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8326.16467.1 ID=prot_E_fasciculatus_S2_contig8326.16467.1|Name=mRNA_E_fasciculatus_S2_contig8326.16467.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=253bp
GVLHSVLQDIREWRVSSTVVDDPSQGKSYLRVYPLSGETPGVTHFIGVLE
NLDTAQAAQQQQQQQQQQPGPSSAAEGPISSSSSSSSPTAAAKGGENSSG
LEAGASEGETSSDSASSTAKGRVKFHDGSSGSGGSSGSGGSDDGTGARHH
NHTGARSSRLTSNNSMSMTTGSDGGFSSSSHSNSGSGSGSGSGSHSGCET
RRSSRRSSSGNGNGNAGGGGRSGGKSADKSSGAGASSPAAQSGGRVPKRG
RS*
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