mRNA_E_fasciculatus_S2_contig815.16303.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig815.16303.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZM1_9PHAE) HSP 1 Score: 231 bits (590), Expect = 9.320e-73 Identity = 134/141 (95.04%), Postives = 138/141 (97.87%), Query Frame = 1
Query: 283 MMSDNRKIGMGLLALGGIFLLLGVMMLFNPXXXXXXXXXXXXXXTMTIGTRRTFVFFFKRKQVRGNLCFFGGVVLVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALRATPVVGNLLNLPVVSALVDKLAGSSSRGRRAPV 705
M+SDNR+IGMGLLALGGIFLLLGVMMLF+P XXXXXXXXXXXXXTMTIGTRRTFVFFFKRKQ RGNLCFFGGVVLVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALR TPVVGNLLNLPVVS+LVDKLAGSSSRGRRAPV
Sbjct: 1 MVSDNRQIGMGLLALGGIFLLLGVMMLFDPGXXXXXXXXXXXXXTMTIGTRRTFVFFFKRKQARGNLCFFGGVVLVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALRGTPVVGNLLNLPVVSSLVDKLAGSSSRGRRAPV 141
BLAST of mRNA_E_fasciculatus_S2_contig815.16303.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD56_ECTSI) HSP 1 Score: 186 bits (473), Expect = 9.100e-56 Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 1
Query: 418 MTIGTRRTFVFFFKRKQVRGNLCFFGGVVLVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALRATPVVGNLLNLPVVSALVDKLAGSSSRGRRAPV 705
MTIGTRRTFVFFFKRKQVRGNLCFFGGV LVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALRATPVVGNLLNLPVVSALVDKLAGSSSRGRRAPV
Sbjct: 1 MTIGTRRTFVFFFKRKQVRGNLCFFGGVALVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALRATPVVGNLLNLPVVSALVDKLAGSSSRGRRAPV 96
BLAST of mRNA_E_fasciculatus_S2_contig815.16303.1 vs.
Match: Putative (GOT1-membrane protein required for ER to Golgi transport n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGF0_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.340e-44 Identity = 79/139 (56.83%), Postives = 100/139 (71.94%), Query Frame = 1
Query: 286 MSDNRKIGMGLLALGGIFLLLGVMMLFNPXXXXXXXXXXXXXXTMTIGTRRTFVFFFKRKQVRGNLCFFGGVVLVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALRATPVVGNLLNLPVVSALVDKLAGSSSRGRRAP 702
+ DN+K+G GLL LG +FL +GV++ F+ TMTIG RRTFVFFFKRKQ+RGNL FFGG++LV + WA +GM QV+GFLNLFGPFIPIAV A+R PV+G++L LPV+S LVD++AGS R P
Sbjct: 3 LDDNKKMGTGLLILGFVFLFMGVILFFDANLLALGDVLFLTGITMTIGARRTFVFFFKRKQLRGNLFFFGGILLVLVRWAFVGMILQVLGFLNLFGPFIPIAVAAMRTLPVIGDILALPVISPLVDRIAGSQQNTDRRP 141
BLAST of mRNA_E_fasciculatus_S2_contig815.16303.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZN9_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.780e-34 Identity = 71/136 (52.21%), Postives = 91/136 (66.91%), Query Frame = 1
Query: 283 MMSDNRKIGMGLLALGGIFLLLGVMMLFNPXXXXXXXXXXXXXXTMTIGTRRTFVFFFKRKQVRGNLCFFGGVVLVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALRATPVVGNLLNLPVVSALVDKLAGSSSRG 690
M+ DNRKIG LL +G FLLLGV++ F+ +TIG RT FF +R++ RG +CF GG++LV L + +IGM Q GFLNLFG F P+AV LR TPVVGN+L+LPV+S +VD+LAGSS RG
Sbjct: 1 MLDDNRKIGTLLLGVGFAFLLLGVLLFFDAALLALGDVLFLCGLALTIGLSRTVRFFTRRERWRGIVCFLGGILLVLLRFPIIGMALQSFGFLNLFGSFFPVAVAFLRQTPVVGNVLSLPVISDVVDRLAGSSKRG 136
BLAST of mRNA_E_fasciculatus_S2_contig815.16303.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7C2_GLOUD) HSP 1 Score: 132 bits (333), Expect = 2.490e-34 Identity = 69/136 (50.74%), Postives = 92/136 (67.65%), Query Frame = 1
Query: 283 MMSDNRKIGMGLLALGGIFLLLGVMMLFNPXXXXXXXXXXXXXXTMTIGTRRTFVFFFKRKQVRGNLCFFGGVVLVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALRATPVVGNLLNLPVVSALVDKLAGSSSRG 690
M+ DNRKIG LL +G +F++LGV++ F+ +TIG RT FF ++++ RG +CF GG+VLV L + +IGM Q GFLNLFG F P+AV LR TPVVG++LNLPV+S +VD+LAGSS RG
Sbjct: 1 MLDDNRKIGTLLLGIGFVFIMLGVLLFFDAALLALGDVLFLCGLALTIGLTRTIRFFTRKERWRGIVCFLGGIVLVMLRYPIIGMIIQSFGFLNLFGSFFPVAVAFLRQTPVVGSVLNLPVISDVVDRLAGSSKRG 136
BLAST of mRNA_E_fasciculatus_S2_contig815.16303.1 vs.
Match: Uncharacterized (protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3G8V1_PHYRM) HSP 1 Score: 131 bits (330), Expect = 6.900e-34 Identity = 70/136 (51.47%), Postives = 90/136 (66.18%), Query Frame = 1
Query: 283 MMSDNRKIGMGLLALGGIFLLLGVMMLFNPXXXXXXXXXXXXXXTMTIGTRRTFVFFFKRKQVRGNLCFFGGVVLVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALRATPVVGNLLNLPVVSALVDKLAGSSSRG 690
M+ DNRKIG LL LG FLLLGV+M F+ +TIG RT FF ++++ RG +CF GG++LV L + +IGM Q GFLNLFG F P+AV LR TPV+GN+LNLPV+S +VD+LAG+ RG
Sbjct: 1 MLDDNRKIGTLLLGLGFAFLLLGVLMFFDAAMLALGDVLFLSGVALTIGLSRTVRFFTRKERWRGIVCFLGGILLVMLRYPMIGMIIQSFGFLNLFGSFFPVAVAFLRQTPVIGNVLNLPVISDIVDRLAGAQKRG 136
BLAST of mRNA_E_fasciculatus_S2_contig815.16303.1 vs.
Match: Vesicle (transport protein n=3 Tax=Gigaspora TaxID=4873 RepID=A0A397UFS2_9GLOM) HSP 1 Score: 130 bits (328), Expect = 1.280e-33 Identity = 63/131 (48.09%), Postives = 87/131 (66.41%), Query Frame = 1
Query: 286 MSDNRKIGMGLLALGGIFLLLGVMMLFNPXXXXXXXXXXXXXXTMTIGTRRTFVFFFKRKQVRGNLCFFGGVVLVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALRATPVVGNLLNLPVVSALVDKLAGS 678
+SD +KIG+GL A G F+LLGV++LF+ T+ IG +T +FF +R ++RG +CFFGG++LVFL W V+GM ++ GFLNLFG F P+ V LR PV+G+LLN P +S VDK+ GS
Sbjct: 3 LSDTQKIGVGLTAFGSFFMLLGVLLLFDGGLLAIGNILFLSGITLIIGFNKTLIFFARRNKIRGTICFFGGILLVFLKWPVLGMVIELFGFLNLFGDFFPVIVSFLRKLPVIGSLLNAPGISHAVDKITGS 133
BLAST of mRNA_E_fasciculatus_S2_contig815.16303.1 vs.
Match: Vesicle (transport protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HYQ9_9FUNG) HSP 1 Score: 129 bits (323), Expect = 7.610e-33 Identity = 63/135 (46.67%), Postives = 90/135 (66.67%), Query Frame = 1
Query: 274 TSRMMSDNRKIGMGLLALGGIFLLLGVMMLFNPXXXXXXXXXXXXXXTMTIGTRRTFVFFFKRKQVRGNLCFFGGVVLVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALRATPVVGNLLNLPVVSALVDKLAGS 678
+S +SD++KIG+GL A G +FLLLGV++ F+ TM IG +TF FF ++ ++RG LCFF G++LVF+ W +IGM +V GF+NLFG F P+ + LR PV+G LL+ P V+ LVD+LAG+
Sbjct: 2 SSAWLSDSQKIGVGLTAFGSLFLLLGVLLFFDGGLLAIGNVLFLGGVTMLIGLSKTFAFFARKNKLRGTLCFFAGILLVFMRWPIIGMMIEVFGFINLFGDFFPVVIAFLRRIPVIGPLLSAPGVTHLVDRLAGT 136
BLAST of mRNA_E_fasciculatus_S2_contig815.16303.1 vs.
Match: Uncharacterized (protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CE71_SAPPC) HSP 1 Score: 128 bits (321), Expect = 1.450e-32 Identity = 68/136 (50.00%), Postives = 86/136 (63.24%), Query Frame = 1
Query: 283 MMSDNRKIGMGLLALGGIFLLLGVMMLFNPXXXXXXXXXXXXXXTMTIGTRRTFVFFFKRKQVRGNLCFFGGVVLVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALRATPVVGNLLNLPVVSALVDKLAGSSSRG 690
MM DNRKIG LL +G +FL LGVM+ F+ MTIG RT FF ++ + RG +CF GG+ LV + + +IGM Q GFLNLFG F P+AV LR TPV+G +LNLPV+ +VDKLAG+ RG
Sbjct: 1 MMDDNRKIGTLLLGVGFLFLFLGVMLFFDAALLAIGDVLFLSGLAMTIGLSRTIKFFTRKDRWRGIVCFLGGIFLVMIRYPIIGMCVQSFGFLNLFGSFFPVAVAFLRQTPVLGTVLNLPVIGDIVDKLAGAQKRG 136
BLAST of mRNA_E_fasciculatus_S2_contig815.16303.1 vs.
Match: GTP_cyclohydro2 (domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GD71_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.790e-31 Identity = 71/137 (51.82%), Postives = 90/137 (65.69%), Query Frame = 1
Query: 280 RMMSDNRKIGMGLLALGGIFLLLGVMMLFNPXXXXXXXXXXXXXXTMTIGTRRTFVFFFKRKQVRGNLCFFGGVVLVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALRATPVVGNLLNLPVVSALVDKLAGSSSRG 690
+MM DNRKIG LL LG FLLLGV+M F+ +TIG RT FF ++++ RG +CF GG++LV L + +IGM Q GFLNLFG F P+AV LR TPV+GN+LNLPV+S VD+LAG+ RG
Sbjct: 259 KMMDDNRKIGTLLLGLGFGFLLLGVLMFFDSAMLALGDVLFLSGVALTIGLSRTVRFFTRKERWRGIVCFLGGILLVMLRYPIIGMIIQSFGFLNLFGSFFPVAVAFLRQTPVIGNVLNLPVISEAVDRLAGAQKRG 395 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig815.16303.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig815.16303.1 >prot_E_fasciculatus_S2_contig815.16303.1 ID=prot_E_fasciculatus_S2_contig815.16303.1|Name=mRNA_E_fasciculatus_S2_contig815.16303.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=142bp MMSDNRKIGMGLLALGGIFLLLGVMMLFNPGLLAIGDVLFLAGITMTIGTback to top mRNA from alignment at E_fasciculatus_S2_contig815:8897..12439+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig815.16303.1 ID=mRNA_E_fasciculatus_S2_contig815.16303.1|Name=mRNA_E_fasciculatus_S2_contig815.16303.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3543bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig815:8897..12439+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig815:8897..12439+ >mRNA_E_fasciculatus_S2_contig815.16303.1 ID=mRNA_E_fasciculatus_S2_contig815.16303.1|Name=mRNA_E_fasciculatus_S2_contig815.16303.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=426bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig815:8897..12439+ (Ectocarpus fasciculatus EfasUO2)back to top |