mRNA_E_fasciculatus_S2_contig8130.16284.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8130.16284.1
Unique NamemRNA_E_fasciculatus_S2_contig8130.16284.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8130.16284.1 vs.
Match: CCT-eta (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G400_ECTSI)

HSP 1 Score: 810 bits (2092), Expect = 4.640e-293
Identity = 426/432 (98.61%), Postives = 429/432 (99.31%), Query Frame = 1 
Query:    1 SQAKDVLIRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKTFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITPDVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 1296
            +QAKDVLIRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLL LSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPK+FDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEW+IIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGIT DVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHAR GDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA
Sbjct:  149 AQAKDVLIRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLDLSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWNIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITADVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARGGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 580
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8130.16284.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK9_9PHAE)

HSP 1 Score: 786 bits (2030), Expect = 3.430e-286
Identity = 415/425 (97.65%), Postives = 419/425 (98.59%), Query Frame = 1 
Query:   22 IRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKTFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITPDVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 1296
            +RCAGTALNSKLISSQK+LFAPMVVEAVSNLDQQLL LSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPK+FDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEW+IIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITPDVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHAR GDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQ    GAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA
Sbjct:    1 MRCAGTALNSKLISSQKNLFAPMVVEAVSNLDQQLLDLSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWNIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITPDVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARGGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQ----GAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 421
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8130.16284.1 vs.
Match: T-complex (protein 1 subunit eta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEV1_9STRA)

HSP 1 Score: 616 bits (1588), Expect = 2.080e-216
Identity = 315/434 (72.58%), Postives = 369/434 (85.02%), Query Frame = 1 
Query:    1 SQAKDVLIRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKTFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITPDVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGG-PISAGMGXXXXXXXXXXXGRGQRP-GVKMMKGRGGA 1296
            + A+ VL +CAGTALNSKLI+SQ+ LFAPM+VEAVS LD +L  + ++G+KKV GGSVTDSFLV+GVAFKKTFSYAGFEQQPK F+NP +LLL+VELELKSEKE+AEVRISDPD YQ IVDAEWSIIY+KL+ CVA+GA+IILSKLP+GDLATQ+FADR LFCAGRV  +DMER+++ATGG+VQ++  GI   V+G CE+FEE QLG ER+NLFTGCP+ARTATIVLRGGSEQF+EES RS+HD+LM+VKR LK  EVVAGGGAIEMELSKALR+ S+ I GK+QL+M + AKALEI+PRQL++NAG D+TD+LNRLR  HA+ GD G+W GV VD E VCDT   GVWEPTINKRN+LRSA EAACLILSIDETV+NPQSE+ GAPSQGVGLGRGG PISAGMG           GRG+ P GV+ MKGR GA
Sbjct:  149 ASARAVLEKCAGTALNSKLIASQRGLFAPMIVEAVSLLDARLADVKMVGIKKVPGGSVTDSFLVRGVAFKKTFSYAGFEQQPKHFENPKILLLSVELELKSEKENAEVRISDPDAYQAIVDAEWSIIYEKLDACVAAGAQIILSKLPIGDLATQYFADRQLFCAGRVEPEDMERISRATGGRVQSTTSGIEASVLGTCEKFEEVQLGEERFNLFTGCPKARTATIVLRGGSEQFLEESQRSMHDALMVVKRSLKACEVVAGGGAIEMELSKALREASRAISGKEQLVMGAVAKALEIVPRQLSENAGLDSTDVLNRLRHAHAQPGDGGRWIGVSVDEEDVCDTMAKGVWEPTINKRNALRSAIEAACLILSIDETVRNPQSEQPGAPSQGVGLGRGGQPISAGMGGMGMAGMMGA-GRGKLPRGVRAMKGRAGA 581
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8130.16284.1 vs.
Match: CCT-eta (n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFR0_9STRA)

HSP 1 Score: 580 bits (1495), Expect = 2.900e-202
Identity = 295/435 (67.82%), Postives = 356/435 (81.84%), Query Frame = 1 
Query:    4 QAKDVLIRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKTFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITPDVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAP-SQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQR---PGVKMMKGRGGA 1296
            +A+ +L+ CAGTALNSKLIS+ KD+FAPMVV+AVS LD QLL L L+G+KKV GGSV  SFLV+GVAFKKTFSYAGFEQQPK F +P +LLLNVELELKSEKE+AE+RI+DPD YQ IVDAEW IIYDKLE CVASGAKIILSKLP+GDLATQ+FADR+LFCAGRV  +DM RVAKATGG VQ + H I    +GHC+ FEE Q+G+ER+NLFTGCP +RTATIVLRGGSEQF++E+HRSIHD+L IVKR +++ EVVAGGGAIEME+SK +R+ ++ I+GK+QLIM+S A+ALE+IPRQLADNAGFDAT++LN LR KHA+D + G+W+GV+VD EG+ DTF+S VWEP  NK NS  +A+EAACLILSIDETV+NP++E+ GA  + GVGLG GG    G             G G+R    GV+  KGRGGA
Sbjct:  150 EARQLLVTCAGTALNSKLISNHKDMFAPMVVDAVSMLDPQLLDLDLVGIKKVSGGSVRQSFLVEGVAFKKTFSYAGFEQQPKKFSDPDILLLNVELELKSEKENAEIRITDPDQYQSIVDAEWRIIYDKLEACVASGAKIILSKLPIGDLATQYFADRDLFCAGRVTNEDMMRVAKATGGVVQCTCHDIQTSALGHCQHFEERQVGDERYNLFTGCPRSRTATIVLRGGSEQFIDETHRSIHDALCIVKRAMRSGEVVAGGGAIEMEVSKFVREEARKIEGKEQLIMNSMARALEVIPRQLADNAGFDATEVLNNLRMKHAKD-EKGRWYGVNVDVEGITDTFQSNVWEPAPNKVNSFAAASEAACLILSIDETVRNPRTEQPGAADANGVGLGPGGGGMGGRRGKAPGGMPPMGGGGRRGMPKGVRAFKGRGGA 583
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8130.16284.1 vs.
Match: CCT-eta (n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8Z7_9STRA)

HSP 1 Score: 577 bits (1488), Expect = 1.140e-200
Identity = 297/441 (67.35%), Postives = 362/441 (82.09%), Query Frame = 1 
Query:    4 QAKDVLIRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKTFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITPDVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAP-SQGVGLG---------RGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 1296
            +A+ +L  CAGTALNSKLIS  +DLFAPMVV+AVS LD +LL L+L+G+KKV GGSV  SFLV+GVAFKKTFSYAGFEQQPK+F NP +LLLNVELELK+EKE+AEVRI+DPD YQ IVD EW IIYDKLE CVASGAKIILSKLP+GDLATQ+FADR++FCAGRVA +D+ RV KATG  +Q + H I    +G C+RFEE Q+G+ER+NLFTGCP +RTATIVLRGGSEQF++E+HRS+HD+L IVKR +++ EVVAGGGAIEME+SK +R+ +++I+GK+QLIM+  A+ALE+IPRQL+DNAGFDAT++LN+LR KHA+ G AGKW+GVDVD EG+ DTFESGVWEP  NK NS  +A+EAAC+ILSIDETV+NP+SE+ GA  + GVGLG         RG P+SA MG        XXX RG   GV+  +GRGGA
Sbjct:  180 EARKLLETCAGTALNSKLISHHQDLFAPMVVDAVSMLDPELLDLNLVGIKKVPGGSVRQSFLVEGVAFKKTFSYAGFEQQPKSFSNPEILLLNVELELKAEKENAEVRITDPDQYQSIVDTEWRIIYDKLEACVASGAKIILSKLPIGDLATQYFADRDIFCAGRVANEDVLRVQKATGAVMQCTCHDINKSDLGRCDRFEERQVGDERYNLFTGCPRSRTATIVLRGGSEQFIDETHRSVHDALCIVKRAMRSGEVVAGGGAIEMEVSKFVREQARSIEGKEQLIMNGMARALEVIPRQLSDNAGFDATEVLNQLRMKHAK-GTAGKWYGVDVDVEGITDTFESGVWEPAANKMNSFAAASEAACVILSIDETVRNPRSEQPGAADANGVGLGAGAGGRGGRRGKPVSAAMGGGGMAGMMXXXRRGGPRGVRAFRGRGGA 619
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8130.16284.1 vs.
Match: T-complex (protein 1 subunit eta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V255_9STRA)

HSP 1 Score: 570 bits (1470), Expect = 1.680e-198
Identity = 293/438 (66.89%), Postives = 357/438 (81.51%), Query Frame = 1 
Query:    1 SQAKDVLIRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKTFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITPD-VVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAP-SQGVGLGRGGPISAGMGXXXXXXXXXXX-GRGQRP---GVKMMKGRGGA 1296
            + A  +L++CAGTALNSKLI++QK LFAPMVVE +  LD QLL LSL+G+KKV GGSVTDSFLV+GVAF+KTFSYAGFEQQPK+F +P +LLLNVELELKSEKE+AEVRI+DPD YQ IVDAEW+IIY+KLE CV SGA+IILS+LP+GDLATQ+FADR LFCAGRV Q+DMERVAKATG  +QTS+ G++ + V G C  FEE Q+G +R N+F  CP ARTAT++LRGG+EQF+EE+ RSIHD+LMIVKR L    VV GGGA+E ELSK L+  + TI+GKQQL+ +++AKALE++P QLA NAGFD+TDLLN+LRQ HA+   AGKW GVDV+TEG+ DTFE+G+WEPTINKRN+L +A EAACL+LS+DETV+NP+S+  GAP SQGVGL    P+SAGMG            GRG+R    GVK  +GRGGA
Sbjct:  148 ADADQMLLKCAGTALNSKLIAAQKGLFAPMVVECIKYLDPQLLDLSLVGIKKVQGGSVTDSFLVQGVAFQKTFSYAGFEQQPKSFTDPKILLLNVELELKSEKENAEVRITDPDQYQSIVDAEWTIIYEKLENCVESGAQIILSRLPIGDLATQYFADRGLFCAGRVPQEDMERVAKATGAVMQTSVFGLSEEGVTGTCGIFEEVQVGGDRMNIFKDCPSARTATMILRGGAEQFLEETERSIHDALMIVKRSLAVGSVVGGGGAVECELSKLLKQKANTIQGKQQLVFTAFAKALEVVPYQLASNAGFDSTDLLNKLRQAHAKSS-AGKWMGVDVETEGITDTFEAGIWEPTINKRNALMAAAEAACLVLSVDETVRNPRSQAPGAPDSQGVGLA---PVSAGMGGQGMAGMVSRGRGRGRRGMPRGVKAFRGRGGA 581
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8130.16284.1 vs.
Match: CCT-eta (n=17 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KV81_9STRA)

HSP 1 Score: 570 bits (1469), Expect = 4.550e-198
Identity = 292/430 (67.91%), Postives = 358/430 (83.26%), Query Frame = 1 
Query:   10 KDVLIRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKTFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITPDVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGG-PISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 1296
            +++L R AGTALNSKLISSQK  F+PMVV+A+ +LD  +  +S++GVKKV GGSVTDSFLVKGVAFKKTFSYAGFEQ PK F NP +LLLNVELELKSEKE+AEVRI DP  YQ IVDAEW+IIYDKLEKCV SGA+IILSKLP+GDLATQ+FADR LFCAGRVAQDDMER  +ATGG +QTS+  +T  ++G C +FEE Q GNER+NLFT CP++++ TIVLRGG+EQF+EE+HRS+HD+LM+VKR +    VVAGGGAIEME+S+ LR++S+T++GK QL++++YAKA EIIPRQL+DNAG D+TD+LNRLRQKH +D + GKWFGVD++T G+CDTFES VWEP  NK NS+ +ATEAACLILS+DETV+NP+SE+   P  G+G G GG P+SA MG     XXXXXX  G   GV+  +G+GGA
Sbjct:  175 RNMLERVAGTALNSKLISSQKKFFSPMVVDAILSLDTDM-DISMVGVKKVPGGSVTDSFLVKGVAFKKTFSYAGFEQMPKYFKNPKILLLNVELELKSEKENAEVRIDDPSQYQSIVDAEWNIIYDKLEKCVKSGAQIILSKLPIGDLATQYFADRGLFCAGRVAQDDMERTMRATGGAIQTSVQDMTDKILGTCGKFEEQQCGNERYNLFTDCPKSKSTTIVLRGGAEQFIEEAHRSVHDALMVVKRTVATSTVVAGGGAIEMEISRHLREYSRTVEGKAQLLINAYAKAFEIIPRQLSDNAGHDSTDILNRLRQKHFKDPETGKWFGVDINTGGICDTFESHVWEPAANKINSVAAATEAACLILSVDETVRNPKSEQ---PQGGMGGGPGGAPMSAAMGGQGMKXXXXXXXGGLGKGVRAFRGKGGA 600
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8130.16284.1 vs.
Match: T-complex (protein 1 subunit eta (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YMJ2_HETAK)

HSP 1 Score: 561 bits (1446), Expect = 2.380e-196
Identity = 279/403 (69.23%), Postives = 343/403 (85.11%), Query Frame = 1 
Query:    1 SQAKDVLIRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKTFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITPDVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGM 1209
            ++ + +L + AGTALNSKLI++ K LFAPMVV+A+ +LD Q L L+L+GVKKV GGSVTDS LV+GVAFKKTF+YAG+EQQ K F +P +LLLNVELELKSEKE+AEVR++DPD YQ IVDAEW IIY+KLE CVA+GAK+ILSKLP+GDLATQ+FADR L C GRV  DDMERVA+ATG  +QTS+ GI   V+G C ++EE Q+GNER+ +F+GCP ARTAT+VLRGG++QF+EESHRS HD+LM+VKR L ++EVVAGGGAIEMEL + LR  +  + GK+Q I+ ++A ALE+IP QLA NAGFD+TDLLNRLRQ+HA+D  AG+WFG+DV  EG+ DTFE+G+WEPTINKRN+L +ATEAACL+LSIDETV+NPQSEK GAPSQGVGLG G P+SAGM
Sbjct:   82 AEGRAMLEKVAGTALNSKLIATNKALFAPMVVDAIQSLDPQQLDLALVGVKKVPGGSVTDSHLVQGVAFKKTFAYAGYEQQSKMFADPRILLLNVELELKSEKENAEVRLTDPDDYQSIVDAEWQIIYEKLEACVAAGAKVILSKLPIGDLATQYFADRGLSCHGRVPSDDMERVAQATGAVMQTSVFGIEDKVLGTCAKYEEVQVGNERFEVFSGCPAARTATLVLRGGADQFLEESHRSAHDALMVVKRALAHQEVVAGGGAIEMELHRRLRQDALAVVGKEQPIVEAFADALEVIPHQLAVNAGFDSTDLLNRLRQRHAQDR-AGRWFGIDVQEEGIFDTFEAGIWEPTINKRNALEAATEAACLLLSIDETVRNPQSEKPGAPSQGVGLGSG-PVSAGM 482
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8130.16284.1 vs.
Match: CCT-eta (n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQ58_9STRA)

HSP 1 Score: 557 bits (1436), Expect = 2.100e-193
Identity = 292/430 (67.91%), Postives = 359/430 (83.49%), Query Frame = 1 
Query:   10 KDVLIRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKTFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITPDVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRP-GVKMMKGRGGA 1296
            + +L R AGTALNSKLIS  K  F+PM+V+AV +LD+    ++++GVKKV GGSVTDSFLV GVAFKKTFSYAGFEQQ KTF +P +LLLNVELELKSEKE+AEVRI DPD YQ IVDAEW+IIY+KLE CV SGA+IILSKLP+GDLATQ+FADR LFCAGRVAQDDMER  +ATGG VQTS+H +TP V+G C RFEE Q+G ER+N+F  C +A++ATIVLRGG+EQF+EE+HRS+HD+LM+VKR + +  VVAGGGAIEME+S+ LR +++TI+GK QL++++YAKA E+IPRQ+ADNAG D+TD+LNRLRQKH +D D GKWFGVD+++ G+CDT+E+ VWEP  NK NS+ +ATEAACLILS+DETV+NP+SE+   P  G G G G P+SA MGXXXXXXXXXXX  G    GV+  +GRGGA
Sbjct:  152 RQMLERVAGTALNSKLISRHKAFFSPMIVDAVLSLDEDQ-DITMVGVKKVQGGSVTDSFLVNGVAFKKTFSYAGFEQQQKTFTSPKILLLNVELELKSEKENAEVRIEDPDQYQSIVDAEWNIIYEKLELCVQSGAQIILSKLPIGDLATQYFADRGLFCAGRVAQDDMERTQRATGGVVQTSVHDMTPSVLGTCGRFEERQVGGERFNIFMDCSQAKSATIVLRGGAEQFIEEAHRSVHDALMVVKRTVASAAVVAGGGAIEMEVSRHLRQYARTIEGKAQLLVNAYAKAFEVIPRQIADNAGHDSTDILNRLRQKHFKDPDEGKWFGVDINSGGICDTYEAHVWEPAANKINSIAAATEAACLILSVDETVRNPKSEQ---PQGGPGQGGGAPMSAAMGXXXXXXXXXXXXXGGLGRGVRAFRGRGGA 577
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8130.16284.1 vs.
Match: CCT-eta (n=2 Tax=Guillardia theta TaxID=55529 RepID=L1I8P8_GUITC)

HSP 1 Score: 546 bits (1407), Expect = 2.480e-189
Identity = 260/384 (67.71%), Postives = 328/384 (85.42%), Query Frame = 1 
Query:    4 QAKDVLIRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKTFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITPDVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQG 1155
            + +D+LIRCA T+LNSKLIS QKD FAP+VV+AV +LD+ L  L +IG+KKV GG++ DSFLVKGVAFKKTFSYAGFEQQPK FD+P V +LNVELELKSEKE+AE+R++DP+ YQ IVDAEW+IIY+KL+K V SGAK++LS+L +GDLATQ+FADRN+FCAGRV  +DM RV KA GG VQTSIH ++PDV+G C +FEE Q+G+ER+N+F+ CPE +T TIVLRGG+EQF+ E+ RSIHDS+MIV+R LKN ++V GGGAIEMELSK LR H++ I GK QL+++SYAKA E+IPRQL+DNAGFD+TD+LNRLRQKH   G+ G+WFGVDVD +G+CD +E  VWEP   K +++ +ATEAACLILS+DET+KNPQ+E+QG
Sbjct:  151 EKRDLLIRCAATSLNSKLISHQKDFFAPIVVDAVLSLDEDL-PLDMIGIKKVPGGTLEDSFLVKGVAFKKTFSYAGFEQQPKIFDHPKVCMLNVELELKSEKENAEIRLTDPEQYQSIVDAEWNIIYEKLDKIVKSGAKVVLSRLAIGDLATQYFADRNIFCAGRVPDEDMRRVVKACGGAVQTSIHNLSPDVIGSCGKFEEVQIGDERYNIFSDCPEGKTTTIVLRGGAEQFIAETERSIHDSVMIVRRALKNSKIVPGGGAIEMELSKFLRMHARQIYGKAQLVINSYAKAFEVIPRQLSDNAGFDSTDILNRLRQKHVAAGEQGRWFGVDVDNDGICDCYEKFVWEPLQVKLSAIGAATEAACLILSVDETIKNPQAEEQG 533
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8130.16284.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
CCT-eta4.640e-29398.61n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Uncharacterized3.430e-28697.65protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
T-complex2.080e-21672.58protein 1 subunit eta n=1 Tax=Tribonema minus TaxI... [more]
CCT-eta2.900e-20267.82n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 Re... [more]
CCT-eta1.140e-20067.35n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1... [more]
T-complex1.680e-19866.89protein 1 subunit eta n=1 Tax=Fibrocapsa japonica ... [more]
CCT-eta4.550e-19867.91n=17 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KV... [more]
T-complex2.380e-19669.23protein 1 subunit eta (Fragment) n=1 Tax=Heterosig... [more]
CCT-eta2.100e-19367.91n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5... [more]
CCT-eta2.480e-18967.71n=2 Tax=Guillardia theta TaxID=55529 RepID=L1I8P8_... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8130contigE_fasciculatus_S2_contig8130:1344..6769 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score811.6
Seed ortholog evalue1.8e-232
Seed eggNOG ortholog2880.D7G400
Preferred nameCCT7
Model size1299
KEGG koko:K09499
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0002199,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005832,GO:0005856,GO:0005874,GO:0005886,GO:0006457,GO:0006458,GO:0006810,GO:0007338,GO:0007339,GO:0008037,GO:0008150,GO:0009566,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009988,GO:0010035,GO:0010038,GO:0010556,GO:0010557,GO:0010604,GO:0010638,GO:0015630,GO:0016020,GO:0016043,GO:0019219,GO:0019222,GO:0019953,GO:0022414,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031647,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032879,GO:0032880,GO:0032991,GO:0033043,GO:0033044,GO:0035036,GO:0042221,GO:0042802,GO:0043209,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044183,GO:0044297,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044703,GO:0045935,GO:0046686,GO:0046931,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051052,GO:0051054,GO:0051082,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051704,GO:0060255,GO:0060341,GO:0061077,GO:0065003,GO:0065007,GO:0065008,GO:0070201,GO:0070202,GO:0070203,GO:0071840,GO:0071944,GO:0080090,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0101031,GO:1901998,GO:1903827,GO:1903829,GO:1904356,GO:1904358,GO:1904814,GO:1904816,GO:1904851,GO:1904951,GO:2000112,GO:2000278,GO:2000573,GO:2001252
Exons10
EggNOG free text desc.protein binding involved in protein folding
EggNOG OGsCOG0459@1,KOG0361@2759
Ec32 ortholog descriptionChaperone
Ec32 orthologEc-19_000640.1
Cds size1299
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03110,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8130.16284.1prot_E_fasciculatus_S2_contig8130.16284.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8130 1344..6769 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842474.9070032-CDS-E_fasciculatus_S2_contig8130:1343..15021696842474.9070032-CDS-E_fasciculatus_S2_contig8130:1343..1502Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8130 1344..1502 -
1696842474.92255-CDS-E_fasciculatus_S2_contig8130:1969..20941696842474.92255-CDS-E_fasciculatus_S2_contig8130:1969..2094Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8130 1970..2094 -
1696842474.9319725-CDS-E_fasciculatus_S2_contig8130:2383..24921696842474.9319725-CDS-E_fasciculatus_S2_contig8130:2383..2492Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8130 2384..2492 -
1696842474.9483721-CDS-E_fasciculatus_S2_contig8130:3119..32541696842474.9483721-CDS-E_fasciculatus_S2_contig8130:3119..3254Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8130 3120..3254 -
1696842474.9606032-CDS-E_fasciculatus_S2_contig8130:3654..37261696842474.9606032-CDS-E_fasciculatus_S2_contig8130:3654..3726Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8130 3655..3726 -
1696842474.9699342-CDS-E_fasciculatus_S2_contig8130:4151..43191696842474.9699342-CDS-E_fasciculatus_S2_contig8130:4151..4319Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8130 4152..4319 -
1696842474.9784777-CDS-E_fasciculatus_S2_contig8130:4702..48351696842474.9784777-CDS-E_fasciculatus_S2_contig8130:4702..4835Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8130 4703..4835 -
1696842474.9870162-CDS-E_fasciculatus_S2_contig8130:5597..56861696842474.9870162-CDS-E_fasciculatus_S2_contig8130:5597..5686Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8130 5598..5686 -
1696842474.9959667-CDS-E_fasciculatus_S2_contig8130:5935..61031696842474.9959667-CDS-E_fasciculatus_S2_contig8130:5935..6103Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8130 5936..6103 -
1696842475.0057511-CDS-E_fasciculatus_S2_contig8130:6628..67691696842475.0057511-CDS-E_fasciculatus_S2_contig8130:6628..6769Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8130 6629..6769 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8130.16284.1

>prot_E_fasciculatus_S2_contig8130.16284.1 ID=prot_E_fasciculatus_S2_contig8130.16284.1|Name=mRNA_E_fasciculatus_S2_contig8130.16284.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=433bp
SQAKDVLIRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGV
KKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKTFDNPGVLLLNVELELK
SEKESAEVRISDPDMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPVGD
LATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITPDVVGHCER
FEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVK
RCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPR
QLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWE
PTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPIS
AGMGGQGMAGMMGGGGRGQRPGVKMMKGRGGA*
back to top

mRNA from alignment at E_fasciculatus_S2_contig8130:1344..6769-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8130.16284.1 ID=mRNA_E_fasciculatus_S2_contig8130.16284.1|Name=mRNA_E_fasciculatus_S2_contig8130.16284.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5426bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8130:1344..6769- (Ectocarpus fasciculatus EfasUO2)
TCGCAGGCTAAGGACGTGCTGATCAGGTGTGCGGGCACGGCGCTGAACTC
GAAGCTCATCTCATCGCAGAAGGACCTGTTCGCACCTATGGTGGTCGAAG
CCGTGTCCAACCTGGACCAGCAGCTGTTGGCTCTTAGCCTCGTGAGTAGA
GCTCGCGCTTTGTGTCTCTAGAGACAACGGGTGGGAAGCGTCGGTACCTC
ACCTGCGTGGCTGCTGCTTCGCCTGGAGCAGTTTTCTAGACACGGGAGGT
AGCTGATCCCCTCGTTTTGTCGGTAACTTTTTTGCGTGCGTGTTTTTTCT
TGCGTCCACCCATGTTTTGCTCGTCTGGGTCACCGTATGCATGCAACGTT
CCCCCTCCCATGTGCTGTGTGGTTTTGATGGATCTGAATCCTTGGGCTCG
GTGTTTGTATTTGTGCCTGGCGTTAGCCTAACCAGATTGTGGCGTGTGAA
GTCCCCGTTCATGCCTGGTTGGACCTGCCTGAGCCCACACCGTCGGTGTC
CCATGTATGTTTGGGGGGTGGGGGGGGGGGTACTCTTATGTTTTGCATGC
CTTAGTCGTTACACCATTGACCACGCGTCCTCGAGAGGACGGAGCATGGT
TCGAACAGGACCGATCACCAATGGCTTATCGGTCCATGTATGTTGGGGGG
CGTTTTTGTTGCTCAGATCGGCGTGAAGAAGGTCGGCGGCGGCAGCGTCA
CCGACAGTTTCCTGGTGAAGGGGGTCGCGTTCAAGAAGACCTTCAGCTAC
GCAGGGTTCGAGCAGCAGCCCAAGACCTTCGACAACCCGGGCGTGTTGCT
GCTCAACGTCGAGCTCGAGCTCAAGAGCGAGAAGGTGTGTTTCTTACTGC
TGCTGCCGCTTCTGCTACTGCTGCTACTGCAGTTGTTGCGATTGTTGTTG
TTTTTGCCGCTGCTGCTGCTGCTGCTGCTCTGCAGTTGCTGGCAGTTGTT
GTTTTTCTGCCGACGAGCTTGCCCCTAACATGTCACATTTTATTTCATTT
TCGTTTTTCGGTCCTACCGGCCATCCGTACCCAACTACTCGAAACAAACC
CTATGGAACCTTCTCTCATTACCCTTGCTGCAGGAATCGGCGGAGGTGCG
CATCTCCGACCCGGACATGTACCAGGAGATCGTGGACGCCGAGTGGAGCA
TTATCTACGACAAGCTCGAGAAGTGAGAAGGGTGTTTTTTATTTGTTTGT
CATGACGTACTCACCACCACTACCACTGTTGTTGTAGGGGGCTGTGAGAG
CTGGGTGCACGACGTTCGCTGCAGTCACTGCCTGGGCGTGTGTGCCCGGA
AGGACCACACAGATAGGATCCCTGTGATAATTGGCTTGTTTGAACAAACT
CCAGGAAAACGCTTCTCCTGGATTCTTCTGCCGCCTTGAGTTAACTGAAG
GTCCTTCTACGGGACCTTTCTTTTTCGTGTTGCTTCGATTGGTAGCTCAC
GTTCGGTCTACGGAGTTGATCCACATTGCTGTGCGTTTGGCGCACTGGGA
TAGGACGTGTTCTTGAACCCGACTCAACGGCGAAAATACGTCCCAACACA
AGCGGTTGAAGTGGTCCCTGTCTAACGCTGCAGAATTACGGCCAGTTGCC
CGGCGTAAGGCCAGTGAAATCGCAATGACACAGATGGCACACACAAGTCA
TGTCTCATGTCTGATGTTCGGAATAGTGCGGGTGAGCGGTCCATGGTCAG
CTCTTGACGCTACGACAGGTAGGCAGTCTTGTACAGGGGCCGCTACCCCT
TTGTACCGGTGTGGGAGAGTATCGCGCTACAAGGGTGTCCTTGCCTATTT
CGGCGTACCCTCGCATTCCGGACAGAATGCCCACACACGGTGCCCGCGCC
CGCCCCGCCGCCTACTGCCACGGTGCCACCTCGCCGCTGCCGACGTTATG
TCGTACGTACGTGATGGATCGATCGATTGTGCAGGTGCGTGGCGAGCGGG
GCGAAGATCATCCTCTCCAAGCTCCCGGTGGGAGACTTGGCCACACAGTT
CTTCGCGGACCGTAACCTCTTCTGTGCCGGCCGCGTGGCGCAGGACGACA
TGGAGAGGGTGGCTAAGGTGAGAGAGGAGGGCAGTGAGTCTGGTGGTGAG
AAGTGGTTGGTTTCTTGAGAAGGAGTGTGCGAGTCAAACAGCACAGACGG
CCTGTTGGTTCAGCAGTAGCAGTGGTGCGGCCGCTACGCGAACCAAAGGT
GCCTGTTTCTGTCCTTTGTTTTGATTGACCGTTGGGTCCTAGAATGGTCG
TTTTGTTTGTTTGGCCGTATCTTGACGTTCTACCTTCACCCAGGACCGTC
AGATAACACGCTTAGCCTGTGGCCGCTATCTTCGGGTAGTACTGTTTACC
TACAATTATAGTGCCAGCCGGGAAGGATACCCGGAATAGCCCTACAAATG
TAGGAGACATGCTTTGGCTTACTACTTTTTTTGCGCTTGTCTGGACGCAG
GCCACGGGAGGCAAGGTGCAAACGTCTATCCACGGCATCACGCCCGACGT
GGTGGGGCACTGCGAGAGGTTCGAGGAGACGCAGCTCGGAAACGAGCGGT
GGAACCTCTTCACCGGCTGCCCCGAGGCGCGAACGGCAACCATCGTCCTC
AGGGGTGGCTCGGAACAGGTGCGAAACCTCTCCGCCGTTTGATGCTGCTG
GTGTTGTTGTTGTCGCTGTTGCCATGACTGTTTTTGCTTTCGGTGTTGAT
GTTGGTGGTGGTGGTGGTGATGGTAGCGCTGCCGTTGTTTGGTTATCTTG
CAGCGCAGGTCAATCGAAAACACAACGAGGTTGGCGTCGGTGTCCTTGCA
GCATGTTTGTTCAGTGTCGAAGACGCCCCCCCCATTCGCGTACGAGGTTT
TCCCTGCTGTATCCGCTCCACACTGCCTGCCTGGTGGGCAGCCTACGTTG
CTGGATCCCCGGTGTTCATTTCGCTGATCGTCTCTATCCCTTGTTGTCCT
TCATTAGGCCTCTCTTCTTGATCCCTGCTCGCTCTTAACGCTCTCCTTGT
CTGTGACCTCCCTTGTTGGTTTTTGCCAATGGACATCAAACAGTTCATGG
AGGAGTCTCACAGAAGCATCCACGACTCGCTCATGATCGTCAAGCGCTGC
CTCAAGAACCGCGAGGTACGGTACGGTATGGTATGGTATGGTATGGTATG
GTATGGTATGGTATGGTACGGTGTGTTCTTGTGGTGACTAGATACCATGG
TAGCGAAGCCGTGCGTTCTCCCTTGAGGTTGAGAACCGTGGTTGGAATTA
TGACGTTCCGTTTTCTCGAAATCGGCGACCACCCGACAAGTAGACGTCAA
CGACATGTACAGCGTTGATTCAAGTATCGTAGGTGCCTCGTCGGCTGCGT
GGCCATATTTGTCATGAAGGTCTTCTCGGCCATGCAGATCTTTTGTACTG
ACGCCGGGTTGTATACTGCATCCCGTTCGGTTCCGTCCTGTCCCCGTTTC
GTGTTGTGTCGTTCCGTCCCGCCGTCACGTTTCCGTCCCATGCTGGTTTT
CGTGCCATGCCGTAGGTGGTGGCCGGAGGGGGTGCGATCGAGATGGAGCT
TTCCAAGGCTCTCCGCGATCACTCCAAGACCATCAAGGGGAAGCAGCAGC
TCATCATGAGCTCCTACGCGAAGGCGTTGGAGATCATCCCCAGGCAGCTG
GTGAGCGTTAGGAGAGCTTCCGCGAAAATAAGTCAAGGAGAAATCAAACT
TAGGCACTGTCATTACGGCCGATGCGCCCTGCTGTCCCGGTGCTGTTATG
ATCAGAACTTTGGCTGCATGCATCTGTATCGGAAGAAAGGTGTGCGTGTT
GGTGGTTCGAGAGAGAGAGAGCACGGCGTCGTACACATGATGAACTTCGA
GATGCGGCGAGATACGTAGTGTCTCTGAGCACTTCCGTGATTGGTTACGC
CGGATGGATGTAGATGACACCCTTCGTGTTCGTCGCATCATTTGTAGACG
CCGGGTTTTCGAGGCCATTCCCAGGTTGTGAGATCGGGTAGGAGGGACTC
CGCGCATTCGCCGGGTTGAAGGACACCGATATTTCGTTGTCATGTCGGCA
GGTGCCGTATTGTGCTGTTGGTGCGGTTTGCGGTATGCTATGAAATGCTA
CATCCATTCCGTTTAAAGAAACAGCACTTTTGTCCCAGACATTTTACTTG
TAGCTTCGTTCATCCGACTGAAAAGCTGCTTTTTATCCCGGAGCAGTGAC
ACTCTTTTCTTCTTCTGTCTCACCGCCTCTCCCATTCTTGATGTCCTTTT
TTCTTTCTTTTTTTTTTCTCTCTCCAGGCGGACAATGCCGGGTTCGACGC
GACGGACTTGTTGAACCGTCTCCGACAGAAGCACGCCAGGGATGGCGATG
CGGGCAAGTGGTTCGGAGTCGACGTCGACACAGAAGGTGAGCTCAAAACC
AAAGCATAACAGATGATTATGTTCTCCTGCCCCCGTTTTGTTGTCGTCGT
TTCGTCATTCTGTAGTTTCATTTGTCATTTGTCCTGTTACATCCCTTGCC
GCTGGTCTGGTCGTGTTTCTTCTAAACAGTGTTGTTGATTTTGTTGTTGT
TCGTGAATTTTGGATGATTTTCAGGTGTTTCGAACATAGCAATCTACACG
TTTCTCGTGATTTCACCTGCGGGACCGGCCTTCCTATCGCACCATATCTC
ATCGTTTTTTCTTCTTTGGCGGCAGGTGTGTGCGACACCTTTGAGTCTGG
CGTGTGGGAGCCGACGATCAACAAGCGAAACTCTCTTCGGTCGGCAACGG
AGGCTGCCTGCCTCATACTATCCATCGATGAAACGGTCAAGAACCCCCAG
GTTTGTTACATATCCCTTCTTGTTTTTTTGACGTGCTGTTGTTTCGCTCA
TGGTTTCCCCAGTTAATGTTCTGAATCATGTTCCACCGTGGGTGCGTGTT
GAAGTTACCGTTAAGTGTGGGCTCTCCCCCTCTGCTGGTCGTGCGCGTCT
CTGTACAATAGCTGCGCGTATCTGGTTGTTTGTTTGTACGCGAAGCGGTA
GACCACCCTGGGGGATTCTAGCCCTTACACTAGCCACGCATGAACAATCC
ATCAGTTCAACGGACAAAGTGACAGAGGATGTGCTGGAAGATCGTAGTTT
AGTTTACATGGGACACGCTTGGCTTGTTGTCCTCGCCAACAACCACCCGG
CTCCGACACACACACCCTTCCTCTGGCGACACGTCTCCTTCTATCTCTTC
CCGCCGCCCCTAACGCCGCTCCCATTCCCTTCCCTTGCTTGGTCCACCAA
ACCTGTTCAACACGCAGAGCGAAAAGCAGGGGGCTCCGAGCCAGGGCGTA
GGCCTAGGCAGGGGAGGGCCGATCAGCGCCGGCATGGGGGGACAGGGGAT
GGCGGGAATGATGGGGGGTGGGGGCCGCGGCCAGAGGCCCGGAGTAAAGA
TGATGAAGGGTAGGGGAGGCGCGTAA
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8130:1344..6769-

>mRNA_E_fasciculatus_S2_contig8130.16284.1 ID=mRNA_E_fasciculatus_S2_contig8130.16284.1|Name=mRNA_E_fasciculatus_S2_contig8130.16284.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1299bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8130:1344..6769- (Ectocarpus fasciculatus EfasUO2)
TCGCAGGCTAAGGACGTGCTGATCAGGTGTGCGGGCACGGCGCTGAACTC
GAAGCTCATCTCATCGCAGAAGGACCTGTTCGCACCTATGGTGGTCGAAG
CCGTGTCCAACCTGGACCAGCAGCTGTTGGCTCTTAGCCTCATCGGCGTG
AAGAAGGTCGGCGGCGGCAGCGTCACCGACAGTTTCCTGGTGAAGGGGGT
CGCGTTCAAGAAGACCTTCAGCTACGCAGGGTTCGAGCAGCAGCCCAAGA
CCTTCGACAACCCGGGCGTGTTGCTGCTCAACGTCGAGCTCGAGCTCAAG
AGCGAGAAGGAATCGGCGGAGGTGCGCATCTCCGACCCGGACATGTACCA
GGAGATCGTGGACGCCGAGTGGAGCATTATCTACGACAAGCTCGAGAAGT
GCGTGGCGAGCGGGGCGAAGATCATCCTCTCCAAGCTCCCGGTGGGAGAC
TTGGCCACACAGTTCTTCGCGGACCGTAACCTCTTCTGTGCCGGCCGCGT
GGCGCAGGACGACATGGAGAGGGTGGCTAAGGCCACGGGAGGCAAGGTGC
AAACGTCTATCCACGGCATCACGCCCGACGTGGTGGGGCACTGCGAGAGG
TTCGAGGAGACGCAGCTCGGAAACGAGCGGTGGAACCTCTTCACCGGCTG
CCCCGAGGCGCGAACGGCAACCATCGTCCTCAGGGGTGGCTCGGAACAGT
TCATGGAGGAGTCTCACAGAAGCATCCACGACTCGCTCATGATCGTCAAG
CGCTGCCTCAAGAACCGCGAGGTGGTGGCCGGAGGGGGTGCGATCGAGAT
GGAGCTTTCCAAGGCTCTCCGCGATCACTCCAAGACCATCAAGGGGAAGC
AGCAGCTCATCATGAGCTCCTACGCGAAGGCGTTGGAGATCATCCCCAGG
CAGCTGGCGGACAATGCCGGGTTCGACGCGACGGACTTGTTGAACCGTCT
CCGACAGAAGCACGCCAGGGATGGCGATGCGGGCAAGTGGTTCGGAGTCG
ACGTCGACACAGAAGGTGTGTGCGACACCTTTGAGTCTGGCGTGTGGGAG
CCGACGATCAACAAGCGAAACTCTCTTCGGTCGGCAACGGAGGCTGCCTG
CCTCATACTATCCATCGATGAAACGGTCAAGAACCCCCAGAGCGAAAAGC
AGGGGGCTCCGAGCCAGGGCGTAGGCCTAGGCAGGGGAGGGCCGATCAGC
GCCGGCATGGGGGGACAGGGGATGGCGGGAATGATGGGGGGTGGGGGCCG
CGGCCAGAGGCCCGGAGTAAAGATGATGAAGGGTAGGGGAGGCGCGTAA
back to top