prot_E_fasciculatus_S2_contig8066.16223.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8066.16223.1
Unique Nameprot_E_fasciculatus_S2_contig8066.16223.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length109
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8066.16223.1 vs. uniprot
Match: D8LQ01_ECTSI (Structural maintenance of chromosomes protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ01_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 8.300e-59
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0
Query:    7 APARLLITKMEMENFKSYGGLREIGPFHKCFSSIVGPNGSGKSNVIDAMLFVFGKRAKKLRLNKLGELIHRSDTFPNLDYCRVSVHFVDILDVSGSEDDYEEV 109
            APARLLITKMEMENFKSYGGLREIGPFHKCFSSIVGPNGSGKSNVIDAMLFVFGKRAKKL LNKLGELIHRSDT+PNLD+CRVSVHFVDILDVSGSEDDYEEV
Sbjct:   82 APARLLITKMEMENFKSYGGLREIGPFHKCFSSIVGPNGSGKSNVIDAMLFVFGKRAKKLCLNKLGELIHRSDTYPNLDFCRVSVHFVDILDVSGSEDDYEEV 184          
BLAST of mRNA_E_fasciculatus_S2_contig8066.16223.1 vs. uniprot
Match: A0A835YML7_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YML7_9STRA)

HSP 1 Score: 176 bits (446), Expect = 5.670e-49
Identity = 85/101 (84.16%), Postives = 93/101 (92.08%), Query Frame = 0
Query:    9 ARLLITKMEMENFKSYGGLREIGPFHKCFSSIVGPNGSGKSNVIDAMLFVFGKRAKKLRLNKLGELIHRSDTFPNLDYCRVSVHFVDILDVSGSEDDYEEV 109
            +RLLITK+ MENFKSYGG+REIGPFHKCFSSIVGPNGSGKSNVIDAMLFVFGKRAKKLRLNK+ ELIHRS+T+PNLD  +VSVHFVDI+D   SEDDY EV
Sbjct:   39 SRLLITKLVMENFKSYGGVREIGPFHKCFSSIVGPNGSGKSNVIDAMLFVFGKRAKKLRLNKVSELIHRSETYPNLDAAKVSVHFVDIIDDQSSEDDYAEV 139          
BLAST of mRNA_E_fasciculatus_S2_contig8066.16223.1 vs. uniprot
Match: A0A813A1Q5_9DINO (SMC4 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A1Q5_9DINO)

HSP 1 Score: 157 bits (398), Expect = 2.830e-47
Identity = 73/99 (73.74%), Postives = 86/99 (86.87%), Query Frame = 0
Query:    8 PARLLITKMEMENFKSYGGLREIGPFHKCFSSIVGPNGSGKSNVIDAMLFVFGKRAKKLRLNKLGELIHRSDTFPNLDYCRVSVHFVDILDVSGSEDDY 106
            P RL+IT++E ENFKSYGG++ IGPFHK FS++VGPNGSGKSNVID MLFVFGKRAKKLRLNKL ELIH+SD +PNLD+ RVSV+F DI+D S  +D Y
Sbjct:    8 PPRLMITRLEFENFKSYGGVKSIGPFHKRFSAVVGPNGSGKSNVIDGMLFVFGKRAKKLRLNKLSELIHKSDQYPNLDFARVSVYFQDIIDTSDEDDGY 106          
BLAST of mRNA_E_fasciculatus_S2_contig8066.16223.1 vs. uniprot
Match: A0A7S3GXC7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXC7_9STRA)

HSP 1 Score: 154 bits (390), Expect = 9.870e-47
Identity = 74/99 (74.75%), Postives = 87/99 (87.88%), Query Frame = 0
Query:    9 ARLLITKMEMENFKSYGGLREIGPFHKCFSSIVGPNGSGKSNVIDAMLFVFGKRAKKLRLNKLGELIHRSDTFPNLDYCRVSVHFVDILDVSGSEDDYE 107
            ARL+ITKM +ENFKSY G +EIGPFHK FSSIVGPNGSGKSNVIDA+LFVFGK+AK+LRLNK+ ELIH+S T+PNLD+ RV+VHF  I D+  S+DDYE
Sbjct:    6 ARLMITKMVLENFKSYAGCQEIGPFHKRFSSIVGPNGSGKSNVIDALLFVFGKKAKQLRLNKVSELIHKSATYPNLDFTRVAVHFQLIYDIEESDDDYE 104          
BLAST of mRNA_E_fasciculatus_S2_contig8066.16223.1 vs. uniprot
Match: A0A8J2SP08_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SP08_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.400e-43
Identity = 79/100 (79.00%), Postives = 89/100 (89.00%), Query Frame = 0
Query:    7 APA-RLLITKMEMENFKSYGGLREIGPFHKCFSSIVGPNGSGKSNVIDAMLFVFGKRAKKLRLNKLGELIHRSDTFPNLDYCRVSVHFVDILDVSGSEDD 105
            APA RL+ITKM +ENFKSYGG+REIGPFHK FSS+VGPNGSGKSNVIDAMLFVFGKRAKKLRLNK+ ELIHRS+ +PNLD  RVSVHF D+LD  G++ D
Sbjct:   11 APASRLMITKMVLENFKSYGGVREIGPFHKRFSSVVGPNGSGKSNVIDAMLFVFGKRAKKLRLNKVSELIHRSEQYPNLDSARVSVHFADVLDEDGADPD 110          
BLAST of mRNA_E_fasciculatus_S2_contig8066.16223.1 vs. uniprot
Match: F0YFI0_AURAN (Structural maintenance of chromosomes protein 4 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFI0_AURAN)

HSP 1 Score: 159 bits (402), Expect = 4.890e-43
Identity = 77/103 (74.76%), Postives = 88/103 (85.44%), Query Frame = 0
Query:    7 APARLLITKMEMENFKSYGGLREIGPFHKCFSSIVGPNGSGKSNVIDAMLFVFGKRAKKLRLNKLGELIHRSDTFPNLDYCRVSVHFVDILDVSGSEDDYEEV 109
            A  RL+I KM +ENFKSYGG REIGPFHK FSSIVGPNGSGKSNVIDAMLFVFGKRAKKLRLNK+ ELIH+SDT+P+LD+ +VSVHF D++D+    D YE V
Sbjct:  845 ATPRLMIEKMVLENFKSYGGQREIGPFHKRFSSIVGPNGSGKSNVIDAMLFVFGKRAKKLRLNKVSELIHKSDTYPDLDWAKVSVHFADVIDLQDGTDAYEVV 947          
BLAST of mRNA_E_fasciculatus_S2_contig8066.16223.1 vs. uniprot
Match: A0A7S1HG93_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HG93_HEMAN)

HSP 1 Score: 144 bits (362), Expect = 5.650e-42
Identity = 68/102 (66.67%), Postives = 85/102 (83.33%), Query Frame = 0
Query:    8 PARLLITKMEMENFKSYGGLREIGPFHKCFSSIVGPNGSGKSNVIDAMLFVFGKRAKKLRLNKLGELIHRSDTFPNLDYCRVSVHFVDILDVSGSEDDYEEV 109
            P RL+IT M +ENFKSY G++ IGPFHK FSS+VGPNGSGKSNVIDAMLFVFGK+AK+LRLNK+ ELIH+S+   N+ +C+VSVHF +I+D +   +DYE V
Sbjct:   19 PTRLVITHMTLENFKSYAGVQHIGPFHKRFSSVVGPNGSGKSNVIDAMLFVFGKKAKQLRLNKVSELIHKSENKMNIPFCKVSVHFNEIIDKNVDGEDYEVV 120          
BLAST of mRNA_E_fasciculatus_S2_contig8066.16223.1 vs. uniprot
Match: A0A7S0KBD7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KBD7_9STRA)

HSP 1 Score: 144 bits (363), Expect = 6.650e-42
Identity = 73/106 (68.87%), Postives = 86/106 (81.13%), Query Frame = 0
Query:    8 PARLLITKMEMENFKSYGGLREIGPFHKCFSSIVGPNGSGKSNVIDAMLFVFGKRAKKLRLNKLGELIHRSDTFPNLDYCRVSVHFVDILDV-------SGSEDDY 106
            P+RL+IT ME+ENFKSYGG++ IGPFHKCFSS+VGPNGSGKSNVIDAMLFVFGKRAKKLRLNK+ ELIH S +   L Y RVSV   +I+DV       SG++DD+
Sbjct:   25 PSRLMITHMELENFKSYGGIKTIGPFHKCFSSVVGPNGSGKSNVIDAMLFVFGKRAKKLRLNKVSELIHNSSS-EKLPYARVSVFMQEIMDVDSNARLNSGADDDH 129          
BLAST of mRNA_E_fasciculatus_S2_contig8066.16223.1 vs. uniprot
Match: A0A7S4K7Y1_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K7Y1_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.470e-41
Identity = 75/104 (72.12%), Postives = 87/104 (83.65%), Query Frame = 0
Query:    8 PARLLITKMEMENFKSYGGLREIGPFHKCFSSIVGPNGSGKSNVIDAMLFVFGKRAKKLRLNKLGELIHRSDTFPN--LDYCRVSVHFVDILDVSGSEDDYEEV 109
            P+RL+ITKM +ENFKSY G++EIGPFHKCFSS+VGPNGSGKSNVIDAMLFVFGKRAKKLRLNK+ ELIH SD + +  L Y RVSVHF +I+D    +DDY  V
Sbjct:   64 PSRLMITKMVLENFKSYAGVKEIGPFHKCFSSVVGPNGSGKSNVIDAMLFVFGKRAKKLRLNKVSELIHSSDAYKDNPLQYARVSVHFQEIVDTGDGDDDYRVV 167          
BLAST of mRNA_E_fasciculatus_S2_contig8066.16223.1 vs. uniprot
Match: A0A7S2PWX0_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PWX0_9STRA)

HSP 1 Score: 154 bits (388), Expect = 3.720e-41
Identity = 75/104 (72.12%), Postives = 87/104 (83.65%), Query Frame = 0
Query:    8 PARLLITKMEMENFKSYGGLREIGPFHKCFSSIVGPNGSGKSNVIDAMLFVFGKRAKKLRLNKLGELIHRSDTFPN--LDYCRVSVHFVDILDVSGSEDDYEEV 109
            PARL+ITKM +ENFKSY G++ IGPFHKCFSS+VGPNGSGKSNVIDAMLFVFGKRAKKLRLNK+ ELIH SD +    L+Y RVSV+F +I+D    +DDYE V
Sbjct:   25 PARLMITKMVLENFKSYAGVKTIGPFHKCFSSVVGPNGSGKSNVIDAMLFVFGKRAKKLRLNKVSELIHSSDAYKERPLEYARVSVYFNEIIDTGDGDDDYEVV 128          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8066.16223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ01_ECTSI8.300e-5997.09Structural maintenance of chromosomes protein n=2 ... [more]
A0A835YML7_9STRA5.670e-4984.16Structural maintenance of chromosomes protein n=1 ... [more]
A0A813A1Q5_9DINO2.830e-4773.74SMC4 protein (Fragment) n=1 Tax=Symbiodinium sp. K... [more]
A0A7S3GXC7_9STRA9.870e-4774.75Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A8J2SP08_9STRA1.400e-4379.00Structural maintenance of chromosomes protein n=1 ... [more]
F0YFI0_AURAN4.890e-4374.76Structural maintenance of chromosomes protein 4 n=... [more]
A0A7S1HG93_HEMAN5.650e-4266.67Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0KBD7_9STRA6.650e-4268.87Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S4K7Y1_9STRA1.470e-4172.12Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S2PWX0_9STRA3.720e-4172.12Structural maintenance of chromosomes protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 12..109
e-value: 1.8E-24
score: 89.0
NoneNo IPR availablePANTHERPTHR43939:SF1STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 4coord: 4..100
NoneNo IPR availablePANTHERPTHR43939FAMILY NOT NAMEDcoord: 4..100
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 13..95
e-value: 4.7E-28
score: 98.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 13..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8066contigE_fasciculatus_S2_contig8066:1670..1996 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8066.16223.1mRNA_E_fasciculatus_S2_contig8066.16223.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8066 1670..1996 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8066.16223.1 ID=prot_E_fasciculatus_S2_contig8066.16223.1|Name=mRNA_E_fasciculatus_S2_contig8066.16223.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=109bp
QPEEPPAPARLLITKMEMENFKSYGGLREIGPFHKCFSSIVGPNGSGKSN
VIDAMLFVFGKRAKKLRLNKLGELIHRSDTFPNLDYCRVSVHFVDILDVS
GSEDDYEEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003395RecF/RecN/SMC_N