mRNA_E_fasciculatus_S2_contig8.16154.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8.16154.1
Unique NamemRNA_E_fasciculatus_S2_contig8.16154.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX9_ECTSI)

HSP 1 Score: 1051 bits (2718), Expect = 0.000e+0
Identity = 534/601 (88.85%), Postives = 561/601 (93.34%), Query Frame = 1
Query:   40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNPQSEETFWPFAPHSRDEKGDIADGKAMGWQQGPGMGLGLQNRAGEGWGQRLSAENDETADARHDGHKSEG--YPAVEELAHRKPDSLETNQNHAREADVRQGLLALTGELPVADQAKYVPASAQHFQSTQVSQGLETLQRRKRRLYPAGDPECLGLPNRGQQHQIQPGAADS-LQGSNLPVFGARVDSSTCESGVDLPADSNGLWMVQPQEARGISSVNPPAPVSSPGRLRAGSRVGTP---VLTASSRRWTLPVPSTAPPVNREGFPLLRLLDGKGKVAPERSWSVDGRIGGARVGQPSPKRTRGVEFWDNLLG 1824
            MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRE+ARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAF  MKALRQAGVEL+VAPYEADAQLAFLSR+GAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYI +SVKGLGIATAYKLVDRHRSLDKI+GAINSSRFVIPEGYW+QYKRARLTFRHHIIYNP++E           DEKG +ADGKAMGWQQGP +GL      GEGWGQRLS ++DETADARHDGHK+EG  YPA E  AHRKPDS ETNQ+HAREA+VRQGLLALTGE+PVADQAK+VPASAQHF+STQVSQGLETLQRRKRRLYPA DPECLGLP+RGQQHQ+QPGAAD  L GSNLPVFGARVD+ TC+SGVD PAD++GLWMVQPQEARG+SSVNPPAPVSSP RLRAGSR+G+P   VLTASSRRWTLPVPSTAPPVNREGFPLLRLLDGKGKVAPERSWSVD RIGGARVGQPSPKRTRGVEFWDNLLG
Sbjct:    1 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRETARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFLLMKALRQAGVELVVAPYEADAQLAFLSRTGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYIPSSVKGLGIATAYKLVDRHRSLDKIIGAINSSRFVIPEGYWEQYKRARLTFRHHIIYNPETE-----------DEKGHMADGKAMGWQQGPDIGL---RATGEGWGQRLSVKSDETADARHDGHKNEGCMYPAAEGSAHRKPDSRETNQDHAREANVRQGLLALTGEVPVADQAKFVPASAQHFRSTQVSQGLETLQRRKRRLYPAEDPECLGLPSRGQQHQVQPGAADRMLHGSNLPVFGARVDNPTCKSGVDRPADNSGLWMVQPQEARGMSSVNPPAPVSSPVRLRAGSRLGSPEARVLTASSRRWTLPVPSTAPPVNREGFPLLRLLDGKGKVAPERSWSVDRRIGGARVGQPSPKRTRGVEFWDNLLG 587          
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK90_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 4.070e-109
Identity = 171/182 (93.96%), Postives = 172/182 (94.51%), Query Frame = 1
Query:   40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKV 585
            MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKR I LERRRQRESARSKGEA       GAAAQHFSKAVGVTHDMAFH MKALRQAGVELIVAPYEADAQLAFLSR+GAVDVVLSEDSDCLPYGCKKV
Sbjct:    1 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRRITLERRRQRESARSKGEAXXXXXXXGAAAQHFSKAVGVTHDMAFHLMKALRQAGVELIVAPYEADAQLAFLSRTGAVDVVLSEDSDCLPYGCKKV 182          
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX1_9STRA)

HSP 1 Score: 333 bits (855), Expect = 1.400e-106
Identity = 159/307 (51.79%), Postives = 226/307 (73.62%), Query Frame = 1
Query:   40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSR-FVIPEGYWDQYKRARLTFRHHIIYNPQSE--ETFWPFAPHSRDEK 951
            MGI+GLL  LKS+T+P H+ +  GL  GVDAYCWLHRGA+SC  E+C G  TDK+V FCM+R+ LLL HG+ P +VFDGA LP+K  +N  RR  R +  +K EAA+AAGE  AA QH++++V +TH++A  F+++L + G++ +VAPYEADAQLAF+S+ G +D +++EDSDCLP+ CK++LFK++N+G  QEI+ R+L++N   SL+ W  SMFLD+CLL GCDY+   V GLGI TA+KLV RHRS   ++ A+ +SR F +P+ + D+++ ARLTFRH  +Y+P+S       P  P +R+ +
Sbjct:    1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPR-VHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQ 306          
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNX5_9STRA)

HSP 1 Score: 329 bits (843), Expect = 1.640e-104
Identity = 159/291 (54.64%), Postives = 207/291 (71.13%), Query Frame = 1
Query:   40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAI---NSSRFVIPEGYWDQYKRARLTFRHHIIYNPQ 903
            MGI GLLP LKSVT+  H+ EY+G+ AG+DA+CWLHRGAF+C  EL  G  TDKY+ FCM+RV +L  +GI P MVFDGAS+P KR ++L RR  R  AR+K  A    G+ G A   F KAV +TH+MA+  +K L++A V  +VAPYEADAQLA+L+R G VD+V+SEDSD LPYGC +VLFK+D EG  QEI+ RNLA N       W  +MFLD+CLL GCDY+  ++ GLGI TA+KLV +HR+  K++GA+         +P  Y +++ RARLTFRHH +Y+P+
Sbjct:    1 MGIAGLLPLLKSVTHTVHLREYQGMMAGIDAFCWLHRGAFTCCTELVLGKTTDKYIRFCMERVRILQENGITPFMVFDGASIPAKRDLHLSRRAARTEARAKALAVHEEGQIGQARTLFQKAVIITHEMAYELIKCLQEANVRYMVAPYEADAQLAYLARKGVVDLVISEDSDTLPYGCPRVLFKLDKEGRAQEIERRNLALNEDYDFEGWTENMFLDMCLLAGCDYLP-NLPGLGIKTAHKLVRQHRTYKKVLGALATPGGKEMAVPGDYMERFARARLTFRHHYVYDPE 290          
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RZD7_SELML)

HSP 1 Score: 277 bits (709), Expect = 6.300e-84
Identity = 134/291 (46.05%), Postives = 194/291 (66.67%), Query Frame = 1
Query:   40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNPQSEE 912
            MGI GLLP LKS+T  T++ EY G++  VD Y WLH+ AFSC  ++C G AT  ++ +CM RVNLL HHGI+P++VFDG SLP+K     +R R RE          A+G   AA  H+ KAV +T ++A   +  LR+  VE IV+PYEADAQ+AFL+  G VD V++EDSD + YGC K+LFKMD  G G E+Q  +L  N  L+L+++   M L++C+L GCDY+  S++G+G+  A+ L+ R RS +K++  +  S  +IP+ Y + +++A LTF HH++Y+P  +E
Sbjct:    1 MGIQGLLPALKSITTSTNVKEYSGMRVAVDTYSWLHKAAFSCSKDICDGRATASFLNYCMHRVNLLRHHGIKPLLVFDGGSLPMKAEQEEKRSRAREEHLKLARECEASGNHAAAYDHYQKAVDITPEVAHQLILVLRRENVEYIVSPYEADAQMAFLALRGVVDAVITEDSDLVAYGCPKILFKMDKNGQGFELQYADLVKNRDLNLTSFTKRMMLEMCILSGCDYLP-SLQGMGVKRAHNLIRRFRSYEKVIRHLKFSGVMIPKSYEEGFRKALLTFCHHLVYDPTQDE 290          
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QPV1_9CRYP)

HSP 1 Score: 273 bits (699), Expect = 5.840e-83
Identity = 140/313 (44.73%), Postives = 193/313 (61.66%), Query Frame = 1
Query:   40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRS--------LDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNPQSE--ETFWPFAPHSRDE 948
            MGI+GLLP L ++    H+S Y+G+K  VD Y WLHRGA+SC +ELCTG  TDKY+ +C+ RV LLLHHG+ PVM+FDGA LP K+     R+  RE  ++KG  AL +    AA ++F +AV +T  MA   +KALR+  VE IVAP+EADAQLA+L+  G V  V+SEDSD + +G   V+FKMD EGHG+E + + L A   L L+ W++  FL +C+  GCDY+  S+ GLGI  A+  +    S          K +  +     V+P  Y   ++RA LTFRH ++Y+P+       WP  P  + E
Sbjct:    1 MGISGLLPVLGNIMESKHVSVYKGMKVAVDTYGWLHRGAYSCSLELCTGAPTDKYITYCIDRVKLLLHHGVTPVMIFDGADLPSKKGTETNRKSSREEFKAKGLQALRSDNRAAAMEYFQRAVDITPRMAHRLIKALRKIKVECIVAPHEADAQLAYLNLKGYVQAVISEDSDIVAFGADTVMFKMDREGHGREYRRKLLGACDKLRLAGWEHERFLQMCIFAGCDYLK-SLNGLGIKRAHAAIQGDGSNRAAPEECYIKALTRLRLEGTVVPPTYQADFRRAYLTFRHQLVYDPEQACLLPIWPVPPELQGE 312          
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: exonuclease (1 n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C6787)

HSP 1 Score: 277 bits (709), Expect = 2.250e-81
Identity = 134/291 (46.05%), Postives = 194/291 (66.67%), Query Frame = 1
Query:   40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNPQSEE 912
            MGI GLLP LKS+T  T++ EY G++  VD Y WLH+ AFSC  ++C G AT  ++ +CM RVNLL HHGI+P++VFDG SLP+K     +R R RE          A+G   AA  H+ KAV +T ++A   +  LR+  VE IV+PYEADAQ+AFL+  G VD V++EDSD + YGC K+LFKMD  G G E+Q  +L  N  L+L+++   M L++C+L GCDY+  S++G+G+  A+ L+ R RS +K++  +  S  +IP+ Y + +++A LTF HH++Y+P  +E
Sbjct:    1 MGIQGLLPALKSITTSTNVKEYSGMRVAVDTYSWLHKAAFSCSKDICDGRATASFLNYCMHRVNLLRHHGIKPLLVFDGGSLPMKAEQEEKRSRAREEHLKLARECEASGNHAAAYDHYQKAVDITPEVAHQLILVLRRENVEYIVSPYEADAQMAFLALRGVVDAVITEDSDLVAYGCPKILFKMDKNGQGFELQYADLVKNRDLNLTSFTKRMMLEMCILSGCDYLP-SLQGMGVKRAHNLIRRFRSYEKVIRHLKFSGVMIPKSYEEGFRKALLTFCHHLVYDPTQDE 290          
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RHQ3_PHYPA)

HSP 1 Score: 266 bits (680), Expect = 8.530e-81
Identity = 129/287 (44.95%), Postives = 185/287 (64.46%), Query Frame = 1
Query:   40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNP 900
            MGI GLLP LKS+  P HI +Y G +  +D Y WLH+ AFSC  ELC G+  DKY+ +CM RVN+L H G+QPV+VFDG  LP+K    ++R R R+    +       G   AA Q + +AV +T  +AF  +K LRQ  VE +VAPYEADAQ+AFL+R+G VD+V++EDSD + YGC ++ FKMD  G G   Q  ++ AN  +  +N+   M L++C++ GCDY+  S+ G+G+  A+ L+ R ++  K+M  +  S  +I E Y   ++RA LTF+HH +Y+P
Sbjct:    1 MGIQGLLPTLKSIMNPRHIRDYAGKRVAIDTYSWLHKAAFSCSKELCLGLPNDKYIDYCMHRVNMLRHFGLQPVLVFDGGGLPMKSDQEMKRARSRKENLERALEHERLGNFTAAMQCYQRAVDITPAIAFRLIKVLRQENVEYVVAPYEADAQMAFLARNGHVDLVITEDSDLIAYGCPQIFFKMDKYGQGVGFQFSDITANKDIDFNNFSRQMILEMCIMSGCDYLP-SLPGMGVKKAHGLMKRFKTYIKVMKHLKFSGVLIDEQYEQGFRRAILTFQHHRVYDP 286          
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W9B0_MARPO)

HSP 1 Score: 278 bits (711), Expect = 2.410e-80
Identity = 143/307 (46.58%), Postives = 195/307 (63.52%), Query Frame = 1
Query:   40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNPQSEETFWPFAPHSRDEKGDI 960
            MGI+GLLP LKS+  P H+ EY GLK  +D Y WLH+ AFSC  +LC G  TDK V +CM RVNLL HHG+QPV+VFDG  LP+K      R R R+    + +    +G   AA Q + KAV +T  +A   +K L+Q GVE IVAPYEADAQ+A+L+ +  V VV++EDSD + YGC +VLFKMD  GHG+E Q  +L  N  L+ +N+   M L++C++ GCDY+  S+ G+G+  A+ L+ R +S +K++  +  S   IP  Y + + RA LTFRH  +Y+P SEE        S DE  D+
Sbjct:    1 MGISGLLPTLKSIITPIHVREYAGLKVAIDTYSWLHKAAFSCSKDLCEGRPTDKIVQYCMHRVNLLRHHGVQPVLVFDGGVLPMKMDQEQIRARSRKENLQRAQEHERSGNHTAAFQCYQKAVDITPVIALSLIKVLQQEGVEYIVAPYEADAQMAYLALNDLVQVVITEDSDLIAYGCPRVLFKMDKSGHGEEFQYSDLVRNKDLNFTNFTKQMVLEMCIMSGCDYLP-SLPGMGVKRAHGLMRRFKSYEKVIRHLRFSGITIPSDYEELFGRAILTFRHQRVYDPISEEMVHLTNVSSVDEFSDL 306          
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H3P1_9STRA)

HSP 1 Score: 270 bits (690), Expect = 1.350e-79
Identity = 145/291 (49.83%), Postives = 192/291 (65.98%), Query Frame = 1
Query:   40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAIN-SSRFVIPEGYWDQYKRARLTFRHHIIYNPQSE 909
            MGI+ LLP LKS+T  T +  Y+G    VD Y WLHRGA+SC  ELC G+ TD+YV + M+RV LL+  GI P +VFDG  LP+K+    ERR  RE  R  G A L A +   A Q F KAV V+  MA   ++ L++ GV+ IVAPYEADAQ+A+L R+GAVD V+SEDSDCLPYGC  VLFKMD  G+ + IQ  +LA NT LS   + + MFLD+C+L GCDY++ S+ GLG+  ++ L+ R+ S  K++ A+    +  I + Y     RARLTFRH  +Y+P S+
Sbjct:    1 MGISNLLPQLKSITKSTTLHAYKGKTVAVDGYVWLHRGAYSCSQELCLGLDTDRYVGYFMERVGLLIKCGIIPYIVFDGGYLPMKKLKEDERRLSREKHREAGLAYLKANKLDLARQSFVKAVDVSPSMAHRVIQRLQETGVKYIVAPYEADAQMAYLVRTGAVDAVISEDSDCLPYGCHHVLFKMDTPGNVEVIQAAHLALNTTLSFVGFTDDMFLDMCILSGCDYVA-SIPGLGVKKSHGLMLRYGSYQKVVRALRLEGKLPITKTYEADVARARLTFRHQRVYDPVSQ 290          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Exonuclease0.000e+088.851 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=... [more]
Exonuclease4.070e-10993.961 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726... [more]
Exonuclease1.400e-10651.791 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 ... [more]
Exonuclease1.640e-10454.641 n=1 Tax=Nannochloropsis gaditana TaxID=72520 Rep... [more]
Exonuclease6.300e-8446.051 n=1 Tax=Selaginella moellendorffii TaxID=88036 R... [more]
Exonuclease5.840e-8344.731 (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233... [more]
exonuclease2.250e-8146.051 n=5 Tax=Selaginella moellendorffii TaxID=88036 R... [more]
Exonuclease8.530e-8144.951 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9... [more]
Exonuclease2.410e-8046.581 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A... [more]
Exonuclease1.350e-7949.831 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8contigE_fasciculatus_S2_contig8:55253..62857 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score1055.8
Seed ortholog evalue7.5e-306
Seed eggNOG ortholog2880.D7FQX9
Model size1829
KEGG koko:K10746
KEGG Pathwayko03430,map03430
Hectar predicted targeting categoryother localisation
Exons11
EggNOG free text desc.5'-3' exodeoxyribonuclease activity
EggNOG OGsCOG0258@1,KOG2518@2759
Ec32 ortholog descriptionHelix-hairpin-helix motif, class 2
Ec32 orthologEc-09_003340.1
Cds size1827
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8.16154.1prot_E_fasciculatus_S2_contig8.16154.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8 55253..62857 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842460.3549545-CDS-E_fasciculatus_S2_contig8:55252..553921696842460.3549545-CDS-E_fasciculatus_S2_contig8:55252..55392Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8 55253..55392 +
1696842460.3689988-CDS-E_fasciculatus_S2_contig8:56107..561671696842460.3689988-CDS-E_fasciculatus_S2_contig8:56107..56167Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8 56108..56167 +
1696842460.3777797-CDS-E_fasciculatus_S2_contig8:56459..565791696842460.3777797-CDS-E_fasciculatus_S2_contig8:56459..56579Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8 56460..56579 +
1696842460.3862114-CDS-E_fasciculatus_S2_contig8:56932..570561696842460.3862114-CDS-E_fasciculatus_S2_contig8:56932..57056Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8 56933..57056 +
1696842460.3949766-CDS-E_fasciculatus_S2_contig8:57595..577331696842460.3949766-CDS-E_fasciculatus_S2_contig8:57595..57733Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8 57596..57733 +
1696842460.4035041-CDS-E_fasciculatus_S2_contig8:58022..581241696842460.4035041-CDS-E_fasciculatus_S2_contig8:58022..58124Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8 58023..58124 +
1696842460.4119394-CDS-E_fasciculatus_S2_contig8:58408..585191696842460.4119394-CDS-E_fasciculatus_S2_contig8:58408..58519Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8 58409..58519 +
1696842460.4202797-CDS-E_fasciculatus_S2_contig8:58878..589921696842460.4202797-CDS-E_fasciculatus_S2_contig8:58878..58992Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8 58879..58992 +
1696842460.4289076-CDS-E_fasciculatus_S2_contig8:61131..614011696842460.4289076-CDS-E_fasciculatus_S2_contig8:61131..61401Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8 61132..61401 +
1696842460.4400387-CDS-E_fasciculatus_S2_contig8:61579..616811696842460.4400387-CDS-E_fasciculatus_S2_contig8:61579..61681Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8 61580..61681 +
1696842460.4485998-CDS-E_fasciculatus_S2_contig8:62311..628571696842460.4485998-CDS-E_fasciculatus_S2_contig8:62311..62857Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8 62312..62857 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8.16154.1

>prot_E_fasciculatus_S2_contig8.16154.1 ID=prot_E_fasciculatus_S2_contig8.16154.1|Name=mRNA_E_fasciculatus_S2_contig8.16154.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=609bp
ASSPVCHRVRWARMGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHR
GAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRS
INLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKAL
RQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMD
NEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGI
ATAYKLVDRHRSLDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNP
QSEETFWPFAPHSRDEKGDIADGKAMGWQQGPGMGLGLQNRAGEGWGQRL
SAENDETADARHDGHKSEGYPAVEELAHRKPDSLETNQNHAREADVRQGL
LALTGELPVADQAKYVPASAQHFQSTQVSQGLETLQRRKRRLYPAGDPEC
LGLPNRGQQHQIQPGAADSLQGSNLPVFGARVDSSTCESGVDLPADSNGL
WMVQPQEARGISSVNPPAPVSSPGRLRAGSRVGTPVLTASSRRWTLPVPS
TAPPVNREGFPLLRLLDGKGKVAPERSWSVDGRIGGARVGQPSPKRTRGV
EFWDNLLG*
back to top

mRNA from alignment at E_fasciculatus_S2_contig8:55253..62857+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8.16154.1 ID=mRNA_E_fasciculatus_S2_contig8.16154.1|Name=mRNA_E_fasciculatus_S2_contig8.16154.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7605bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8:55253..62857+ (Ectocarpus fasciculatus EfasUO2)
GCGAGCTCTCCCGTGTGTCACCGTGTTCGCTGGGCGAGAATGGGGATCAC TGGCCTCCTTCCGTTTCTGAAGAGTGTCACCTACCCGACTCATATCAGCG AGTATCGTGGTCTCAAAGCTGGGGTGGATGCCTACTGCTGGTAAGAGGCA ACATCCAGACGCGCTGCGTAGACAGGTCTCCCACTGCATAGTCCACTGCG CGTTGCTTTAAACACTGCAGCAGGTTTCAAACTGGTTGTCCCATGCGTCT CGCGTAAACGTTAGGTTCCTGGCTGTCAAATCAGGATATTGAACATACGC ATATTTGACGGCGCATACGCAAATCCACCAACCGTATTTTTCAAATTTTT GAACCGACGCGGGTAGCCGTGTCCCTCCCTCTCCTGTTGTCGGAGCAAGT GTTCCGCCTCACCGGTGATAAGAAAGGGAGTGTCCATACAGGTTGCTGGT TCTACGGTTTTTACAATGCATATAATCGTAGCATAATTTGTTTTCATCTT CATTTTTGGGGACGTCATGTGATGCGCAACCTACCATAAGCATCGTGGTA TAAGAGTGTAGGTGCATGTCCGAGCGGGTTGACGTGCCTTGCTTGCCGTG TTACAACGCTCAAATAAAACTCCACTGCTTCCCCTGACTGCCGTGTGTGC GCTACTGGCATGTAAACGTCTTTCTTCCTCTCTCTTCGCACGGGCATTGG TAAACGGTCGTGTGTTTTCCCTCCTCTGCATCTACATGCGACACACATGA TATCTACTGAAGAGACTCTTGAAGGGTGCGGTCGTATGTTTCAATTGGTA TGTTTTGTCTGTCAACAAAACGTTCGTGTCCACTTTGTGCTGGTTGCAAG AGCAGGCTTCATCGTGGCGCTTTTAGCTGCGGGATGGAGCTCTGCACTGG TGTGGCCACCGACAAGTGAGAGTTTTGTGATGCGAGGGCGCTGTGGAAAA CTAGTCTAGTGTACAGAGTTTTGGGAAGCAGCGCATCCACCGGCATCCAC CGGCATGTTCATTGCCCAGGCAATCGAACAGAAAAATGGGGTGTCACCCG GCGATGGGATGGGGACGGAAGCAACGAAGGCCTCTATCGCTTGAGTTTGA ATCACTGTTGTTGGCCTCGGGTGACGATGGTGCGCGCTATATTCAGCTCC AGACCCTTCATCTTTCACCCCTTTTTCACTCAATCCTCCGTCCTCACTTA CGCTTAGGTACGTCGCTTTCTGTATGAAGCGTGTGAACCTTCTACTGCAC CACGGGATCCAGCCCGTCATGGTGTTCGATGGCGCAAGCCTCCCCATAAA AAGGAGCATAAATCTGGAGCGCCGGAGGTGGGGTACATTTGCATGTTGGT ATACCTTTTTGTGACTCAGGCGACATGGGCTGCGCCGTTTTAGGAGTAAA ACGAGGAGCTATGCATACGTTGCCTTGGGAACCATGTCGTTTACAACGCC GAGGGCTTGCTCATTGCGATCGCGATAAACGAAATATTATGGTAGCCCGC GCGTGCACACCGAGATGTTGGGGCGGGGTGGTACGACCATGGATGCCCAA CTAATGTCACAAAGACAGAGGATCCTCCTGCCACTGCTGCTCATCGTCAG CGGTCACAACTCTAAGTAGAACCGCAGCTGAGCGGCTCGAACCTTTTATC TCTCTCCATATATTAATGCTTCGATGCCAGACAGAGAGAGTCGGCGAGGA GCAAGGGTGAGGCAGCTCTAGCGGCGGGAGAAGCGGGCGCAGCTGCCCAA CACTTCTCCAAGGCCGTCGGAGTGACGCACGACATGGCCTTCCACTTCAT GAAGGTGATACCGACCTGTTGTGTTGATTTGCGCTGTGAACAGTTTTGTA TCTGGAGCTTGTGCACAGCTCCATTTGGTTATTTCAGTAACGTACCTGGA GCGTCCATCCATCAGACAGCACACCTTCGTCTACATGTTGAGCGCCTCTT TAGGAGCGCGTCGATGTTCGAGCGCTTGCACTGATCATGGAGTACGAGCC ATCTGATCGACGTGCTTTTCTGTAATGAAACGGAGGATAGCTGTGTTTGC GGCAGCAAAGTTGCATCACCTCGCTTTGCTACCGTGCGCTGTACTCTCCT GCTGCATATGACCCTTGCGATAAGTACTCTGGCGCAAGCAGAGCACATCA GATCCAAACGTTTCGCGGCGTTGCACACGGCCCAGCCATTCCTGAGCTAA TATTGTAGTCACTATACTGTTCATATAGACATGGCTTCTTTCTCGAGGAT TGACCGGACCCCGACCACCAAGCCTCCAACTAACGCACAACATGATTTTA TTTGATACTTTTGATTCAATCTGTATGGACGTGTTTGATGCAGGCGTTGC GACAAGCAGGGGTAGAGCTCATCGTGGCGCCGTACGAAGCAGATGCACAG CTGGCGTTCCTCAGCCGAAGTGGTGCTGTGGATGTTGTGCTATCGGAGGA TTCCGATTGCCTTCCTTATGGGTGCAAGAAGGTAATGTCGATGGTAGGGG TCTGCTAAGCGTCCACCCTCGTGGGCATGGGGATGTTCACGCGACCCTGG ACGCGACTAACTAGATTGCTGGTGTCGCTTAGTGCGTTGCGCGCATGTTT TTCTGGTCCGAAGTTGTGCTCTTTCCTGCCGGCTGCAAGGTGACATGCTT AGGGTGCAGACAGCAGTGAGTCGCAAGCGCATGACCCTCATAGGTGCTGT TCATTCCTGCCGATTGCAAGGTGACATGCGTAGGGTACAGACAGCAGCGA GTCGTGCGTGACCCTCACAGGTGCTGTTCAAGATGGACAACGAGGGCCAC GGGCAAGAAATTCAGCTGAGAAATCTCGCTGCAAACACGCCGCTTTCGTT GAGCAACTGGAAGAACAGCATGGTGAGCCGAGAATCGTTGAGGGTGATGT TTCAAGTTCTTCAATGGCGCTCGATGCTAATAGTGTGCATGATTCCACTC TGTGCGGGAGCTGGTGCGAAGCACTCGAAAAGGATGTCCCGCTTGCTGAG TCTAGGTAGCTGAGATGCACACGACAACATCATGATGGGCCTGAAAAAAC GAAATGGATATTGCATCCAAATTGCACACCACATCCATCGCACAAGCAGT GAATGTAAGTTGTTTTCAGTTGTCCCTCCCGTGCGTGCTTGCAATTGTCC TCACAGTTTTTGGATCTCTGTCTTCTGGTGGGCTGTGACTACATATCTAC TTCCGTGAAAGGTCTGGGCATTGCAACAGCATACAAGCTCGTCGATAGAC ATCGGAGCCTGGACAAGGTAGGCAGCCGCAATCACGCGTCCAATGGATCC ATTGGTGGCTGAGACTTACTACCGCAACACATCACATTGTCGAGACAACC GTTGGGCACGACGCTCATATCTGGACACCGACTATGAACAATTGGTTGCA TTGATTTCGATCCAGGGGTCCCTCCCTCATGGTGAGCCTGTCTGTAACGA AGTTCGAATCAACTCACATATGAGTCTGCAAGTACGAGCAAGTACGAGCA CTGAACTAAGTCAGCATTTGCAAGGTGGGCTCTTTTTTATATCGTACTTG AAAGCCCCGCCCGTTGAGAAGTTGGCTGAGGTGCATGTTTCCTTGATGCA TATGCTTCTTTCACCCTCGTTTACAGATAATGGGCGCCATCAACTCCTCA AGGTTCGTCATACCAGAGGGATACTGGGACCAATACAAGAGGGCGCGATT GACTTTTCGACATCACATCATCTACAACCCGCAGTCTGAGGTAGGACGTT GTTCGTTCGGTGTTTAGGGCAGCGGTTGGAGCTGTTTATATTGCTCGAGA CTCTGTTCCAATGAAGTGTTACTTCCGGCAGTACTGAAATGGTCTGGAAT CTGGAGTACAGCACGGGTGTGTCGAAGCATTATCTTGTTTTGCTTGAAAT TTACGACTGACTGTCTGGCGTTTCCGGTAGTTTCGCGGGTAAATTAACTA GTTCTGCTTCTTTAAAGAAAAAATACAAGTACAAACACCGAAAGACTACC CGTTCGAGAAAAAGCCGCAGTCGAAGGGGATGTGTTAGAAGTCTTTACAA TGAATTGTAAAAAACCGACTGGGTACTGGGCTTATTTTGAGTCGTTTTTA AGCCTATACACTGATTATTTGTACATATGATCAGTGATACCAGTAGGTGC TAAGCACAAAAGCGAAAATCATTTTATTTAAAGAAGAACTTTGTTACACG TTCATTCTAATCTGCCTGTCTGTCGTACATTTTAATTTTTGAACGTACAT ACATACATGCAGTTGGAGCAGCTGTTCTGTTTTCCGCTCATTTTGGAATT TCTTTGTTTTAGGTCTTCGAACGACAGGGGTCCGACAACAAGCGAACTGG TCTTCGCCAGAGAACAATTGTGTTTTTTATTGCGACGTAGGGCGGACGCA CATGTGAACAACACTCTACACAATCGCACGTACAGTTTCTCTGTGACACC CGCCGGTGCTGCTCGATATACAGGTGAAAAAGATGAGGTGATTGACGCAA GTACCCCTTCTCCCCTTGACCGACCCGTTAGACCACAATGCATCTCATGC CGATCGGGAACACGGCCAAGGAGTTGGATAACCTTCGTTTCTTGGGTGAC CATCTACAGCCCCCCATCGCACAAGGTGAACCAACATAGGACTATTGTAC GGACGGTGTAAGGATACGTAACCGTTGAGAGTTTCAGGCGTGGTAGCACT TTGTCACGCCATTCCAAGTTTTGGGAAGCAGAGCTTCAAGCTACCATCCG TTTGAATGTTTGGGCTACAGTGCCCCCATCGTGGATTCCGTACCAAATAC CGTTCTCGTCACGCTCAATTTTTTTCTTTGTTTCTATATACGTCCTCTTC GTTTCCGTCGCTCGCAGTGGTCACACACAAGGGCTCCCCTGTAGTGGTTG CCTTGTTTTTCGCCTCGAGAAGGATTCAGCAGTATATATCGTCCCAAAAC AAACTCACAACGCGAAACACCCGGTGCGGAGGTACGAGGCAAACGCAATG CAATCTACCTGAGGCCGAGCTCAAGACGGAACTCTTGCGTGCGTGTTGAT GATTTCTTACACTCTTTGGTTGGGTCTGTGAGATGTGGGTGCGCTTGGGA GTTATCAGCGTTTAGGACCGGGAATCGCGACTCTCTAACGCTTCTCTGCC CGACACGTTTTGTCAGGTGTGGGATCGGGGCGTTTGCTGCCCACAAGCCA CCAGCCGTACGAAACAGCAGCACCTCTGAAGCATGGCGTGCCCTGCTCCC CACCGCCCTCGCCCAGAGCCCAGAAGACGCCGCCCGTCGACGCCACTGCC GCGCGGTCCCTCGCGGCGGCGGCGGCTGCTGCTGCGAACGGAGTAGGGGT CGCTGGCGGTACATATTGGGATGAACGTGTGAGGGAGGGTGGCGAACATC AAGTTGGTCCCATGGCTTCGGTGCAGTCTCCTTTGTCTCGAGCGTTTATC GATAGCCCCTTCTGCGCGAGTAGACCTGCCCTCAGGGAGCTACCGTTTGT GACGCACGAGGATGTTCCCGCTGCCCAGGAGTCGGTGGGATGGGGCGTAG CATCAACCGACACGGCATCCGGTTGGGCAATTGGCGACAACCACCGTCAG CCAGGTGTGTCGGAGACGTGTGTGCGCAACGATGATTGGAGAGCCCACTT CCATGGAGAGGACAACGGTGCTAGTGGTGCTGACGTGGGCAGTGATTCAA CTGGCCTTGGGGGGCGGGAGGAGAGATGTCAAAGCCAGGGTCTCGGCTTG ATGCAGATACGAAGGGTGGAACAGGCCGCTAAGCCCGCATTAGGTTTCTC GCCGGCCGTCCAGTCGGCTGCGCCGGAATCCTCGGGGACATCTCGTGGAA ATGAACGTTCGTTTCGTGCGAGAGGAGAGGAGACGTTTTGGCCCTTTGCT CCCCATTCGCGGGATGAGAAGGGAGACATTGCTGACGGGAAGGCCATGGG CTGGCAACAAGGGCCCGGCATGGGGTTGGGGCTACAGAACAGGGCCGGCG AGGGCTGGGGCCAACGACTTTCGGCGGAAAACGATGAAACTGCGGACGCG CGACACGATGGACACAAAAGTGAGGGATACCCTGCCGTGGAAGAATTGGC GCACAGGAAGCCCGATAGTCTTGAGACCAACCAGAACCACGCTCGTGAGG TGAGTCACAGTAAAGTACGTTGGGACACCCCGGCACGTGTGGGTGTACTT TGTGGAGGTTACTATTCTAAAAGCAAACGGGATGGCGTTGCTACGCGTGG GATTATGTCAGACGTGCGAGGCCTCTTCCCGTAGATTTTGACTTGAGGTG CCCTCGATTGTGTCGCGCCCATCCTAGGCGGACGTGCGGCAAGGTCTACT AGCGTTGACTGGCGAGCTTCCAGTTGCTGACCAAGCCAAGTACGTACCTG CTTCTGCGCAGCACTTCCAAAGCACACAGGTGAGATGTCACTGAGATACA CGTTTGGTCTGTGTTCAGGGTCTTTTGCAGGTGTAGGTCTCACAAGAGTG GCACACACTTTCTTGCGTACCTTTCTTTTTTTTTATCATCGTGTTCCTTA AACTTGTCCGACCACGATTGATTCCGACAGACGCATATGCAGTACAGGTA AATTAAGTCAAAAGGTAGCGTTTTTCGATACAAGTGAGTGAGGTCACCTC TGGGGTTCTTGGAATGCTTCGAAATACTGCACGGTCGAGTTGGGGGCGCA AATTGGCACATGACGCTATGCAGAAGGCACTCGTTCGTGAGTTTACCCAT TTTGAATTCTATGTGAGTCGTCGACGAGGGGAGGACATTGATTGCTGAAG ACGCGCAACCTGCCTTCAGGGAAAGTATGTACTGCTGTAGTCTTGTGTGT GACGCCGCCTGAAACAAGGTGTCTCGAGAAACAAGACAGCAATGGGGAGA GACGTATGCATAGATGGAACGACAAAAACGGCCTTCATCGTGTCGTGGTG CTCGCCCCCTGTACTGCACAGATATTCGATGTGGTACCCTGAGTTCCAAT AAGCGCCTTCATGTCCTAAACAACGCCCATTTTACCGTTTGTTCTTCACG ATGCCGCAGGTAAGCCAGGGGCTCGAGACACTTCAGCGCAGGAAAAGGCG CCTGTACCCAGCAGGAGACCCTGAGTGCCTTGGGCTACCAAACAGAGGAC AGCAACACCAGATCCAGCCTGGCGCCGCTGACAGTTTGCAAGGAAGCAAC CTGCCAGTTTTCGGGGCTAGGGTTGACAGTTCAACTTGCGAGTCTGGCGT CGATCTCCCAGCTGATAGTAATGGGTTGTGGATGGTCCAACCTCAAGAGG CGAGAGGAATTTCGTCCGTCAACCCGCCTGCACCTGTATCATCTCCTGGT AGACTGCGAGCAGGGAGTCGTGTAGGGACACCCGTGTTGACGGCTTCCTC TAGGCGATGGACACTACCCGTACCTTCGACCGCGCCCCCGGTAAACCGGG AAGGCTTCCCGCTATTGCGCTTGTTAGATGGAAAGGGGAAGGTTGCCCCC GAGCGATCGTGGAGTGTAGACGGACGAATAGGCGGCGCAAGGGTAGGACA ACCGTCGCCCAAGCGCACACGTGGGGTTGAATTTTGGGACAACCTTTTGG GCTAG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8:55253..62857+

>mRNA_E_fasciculatus_S2_contig8.16154.1 ID=mRNA_E_fasciculatus_S2_contig8.16154.1|Name=mRNA_E_fasciculatus_S2_contig8.16154.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1827bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8:55253..62857+ (Ectocarpus fasciculatus EfasUO2)
GCGAGCTCTCCCGTGTGTCACCGTGTTCGCTGGGCGAGAATGGGGATCAC
TGGCCTCCTTCCGTTTCTGAAGAGTGTCACCTACCCGACTCATATCAGCG
AGTATCGTGGTCTCAAAGCTGGGGTGGATGCCTACTGCTGGCTTCATCGT
GGCGCTTTTAGCTGCGGGATGGAGCTCTGCACTGGTGTGGCCACCGACAA
GTACGTCGCTTTCTGTATGAAGCGTGTGAACCTTCTACTGCACCACGGGA
TCCAGCCCGTCATGGTGTTCGATGGCGCAAGCCTCCCCATAAAAAGGAGC
ATAAATCTGGAGCGCCGGAGACAGAGAGAGTCGGCGAGGAGCAAGGGTGA
GGCAGCTCTAGCGGCGGGAGAAGCGGGCGCAGCTGCCCAACACTTCTCCA
AGGCCGTCGGAGTGACGCACGACATGGCCTTCCACTTCATGAAGGCGTTG
CGACAAGCAGGGGTAGAGCTCATCGTGGCGCCGTACGAAGCAGATGCACA
GCTGGCGTTCCTCAGCCGAAGTGGTGCTGTGGATGTTGTGCTATCGGAGG
ATTCCGATTGCCTTCCTTATGGGTGCAAGAAGGTGCTGTTCAAGATGGAC
AACGAGGGCCACGGGCAAGAAATTCAGCTGAGAAATCTCGCTGCAAACAC
GCCGCTTTCGTTGAGCAACTGGAAGAACAGCATGTTTTTGGATCTCTGTC
TTCTGGTGGGCTGTGACTACATATCTACTTCCGTGAAAGGTCTGGGCATT
GCAACAGCATACAAGCTCGTCGATAGACATCGGAGCCTGGACAAGATAAT
GGGCGCCATCAACTCCTCAAGGTTCGTCATACCAGAGGGATACTGGGACC
AATACAAGAGGGCGCGATTGACTTTTCGACATCACATCATCTACAACCCG
CAGTCTGAGGAGACGTTTTGGCCCTTTGCTCCCCATTCGCGGGATGAGAA
GGGAGACATTGCTGACGGGAAGGCCATGGGCTGGCAACAAGGGCCCGGCA
TGGGGTTGGGGCTACAGAACAGGGCCGGCGAGGGCTGGGGCCAACGACTT
TCGGCGGAAAACGATGAAACTGCGGACGCGCGACACGATGGACACAAAAG
TGAGGGATACCCTGCCGTGGAAGAATTGGCGCACAGGAAGCCCGATAGTC
TTGAGACCAACCAGAACCACGCTCGTGAGGCGGACGTGCGGCAAGGTCTA
CTAGCGTTGACTGGCGAGCTTCCAGTTGCTGACCAAGCCAAGTACGTACC
TGCTTCTGCGCAGCACTTCCAAAGCACACAGGTAAGCCAGGGGCTCGAGA
CACTTCAGCGCAGGAAAAGGCGCCTGTACCCAGCAGGAGACCCTGAGTGC
CTTGGGCTACCAAACAGAGGACAGCAACACCAGATCCAGCCTGGCGCCGC
TGACAGTTTGCAAGGAAGCAACCTGCCAGTTTTCGGGGCTAGGGTTGACA
GTTCAACTTGCGAGTCTGGCGTCGATCTCCCAGCTGATAGTAATGGGTTG
TGGATGGTCCAACCTCAAGAGGCGAGAGGAATTTCGTCCGTCAACCCGCC
TGCACCTGTATCATCTCCTGGTAGACTGCGAGCAGGGAGTCGTGTAGGGA
CACCCGTGTTGACGGCTTCCTCTAGGCGATGGACACTACCCGTACCTTCG
ACCGCGCCCCCGGTAAACCGGGAAGGCTTCCCGCTATTGCGCTTGTTAGA
TGGAAAGGGGAAGGTTGCCCCCGAGCGATCGTGGAGTGTAGACGGACGAA
TAGGCGGCGCAAGGGTAGGACAACCGTCGCCCAAGCGCACACGTGGGGTT
GAATTTTGGGACAACCTTTTGGGCTAG
back to top