mRNA_E_fasciculatus_S2_contig7964.16118.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7964.16118.1
Unique NamemRNA_E_fasciculatus_S2_contig7964.16118.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7964.16118.1 vs.
Match: G (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J907_9PHAE)

HSP 1 Score: 1218 bits (3152), Expect = 0.000e+0
Identity = 664/729 (91.08%), Postives = 678/729 (93.00%), Query Frame = 2
Query:   20 MPYGKSNPKRGQESLGKALQRRRAQERAAADSASSYDVDGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVVGPDGLEMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGRGVAVLFFSARQQQEQLNREAREERDIADGGLGAGAPAPDAYDSXXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKSLRVLSRLEMCVELERLARTLGSPDPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAPEAIARFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLQQPENIDLMAEVLEKRAVVAAREAELGLTVGAGGKGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNTMPHHQTYAGPAV 2206
            MP+GKSNPKRGQESLGKALQRRRAQERAAA SASSYDVDGSKARGKMTSVLEASNLDDFI+SAMMSERAFESHKENTVV+GPDGLEMSLDENGEI+AAAGSGKD G DEFDFEHMNIPRRP WAAGMTAEDLDYQERKSFLEWRRGIANAEEKNG+MKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREI PPKPTVVVVNKADYLSRAQQREWARHF+GRG+ VLFFSARQQQEQLNREAREERDIA+GGLG+G PA DAYDS       XX                V  SDA SAA       G AKKGHAGGGEGA SSAG RGSGT V KGDKSL+VLSRLEMCVELERLARTLG+PDPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGD RDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADL  EAI RFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASL+QPENIDLMAEVLEKRA VAAREAELGLTVGAGG+GGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNTMPHHQTY+GPAV
Sbjct:    1 MPHGKSNPKRGQESLGKALQRRRAQERAAAASASSYDVDGSKARGKMTSVLEASNLDDFISSAMMSERAFESHKENTVVLGPDGLEMSLDENGEIDAAAGSGKDPGTDEFDFEHMNIPRRPAWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGDMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIVPPKPTVVVVNKADYLSRAQQREWARHFKGRGITVLFFSARQQQEQLNREAREERDIAEGGLGSGPPASDAYDSEDGEDDTXXDFEADTEGDGEEEEE-VALSDAPSAA-------GAAKKGHAGGGEGATSSAGRRGSGTDVGKGDKSLQVLSRLEMCVELERLARTLGTPDPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDVRDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLESEAITRFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLKQPENIDLMAEVLEKRAAVAAREAELGLTVGAGGRGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNTMPHHQTYSGPAV 721          
BLAST of mRNA_E_fasciculatus_S2_contig7964.16118.1 vs.
Match: Lsg1, (cytoplasmic GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPB7_9STRA)

HSP 1 Score: 538 bits (1387), Expect = 8.120e-179
Identity = 383/778 (49.23%), Postives = 473/778 (60.80%), Query Frame = 2
Query:   59 SLGKALQRRRAQERAAADSASSYDVDGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVV-GPDGLEMSLD--------ENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGRGVAVLFFSARQQQEQLNREAREERDI----ADGGLGAGAPAPDAYDSXXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGV--------------SKGDKSL----RVLSRLEMCVELERLARTLGSPDPSRNG----GRACVGMVGFPNVGKSSLINVMVGATPLSHGGV-RVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAML----------------SPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAPEA-IARFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLQQPENIDLMAEVLEKRAVVAAREAELGLTVGAGGKGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRR--GKK---------RDGFVRNTMPHHQTYAGP 2200
            SLGKALQRR+AQ+ A   + + +DVDGS  RGK  SVLEA++L+DFIASAM+SER FESHK +TV++ G  G ++ +D        E  E  AAA          F FE M +PRRP W AGM+AEDLD  E+ +F+EWRR IA  EE+   +KVTPFEKN+EVWRQLWRV+E+SDLV Q+VDARNPLFYYS DL AYARE+ PPKP +++VNK+DYL+ AQ+REWA HF  +G   LFFSAR  Q +LNREAR  R +    AD    A A   DA   XXXXXXXXXXXXXXXXXXXXXXXXX       SA E                 +GA+ +AG  GS                  S+ ++ +    RVLSR E+   +E LAR+LG+   +R+     GRACVGMVG+PNVGKSS+IN + GATP SHG   RVSVGATPGKTKHFQTL LS SL+LCDCPGLVFPSFVSS AEMICAGVLPIMQMR+ + P+AL+ARR+PRHILE+TYTI                                  +  ++L ++C++RGL+R   LG+ D+PRAAR +LKD+T+G LLFCHPP DL+  A +A FL+ET++T L + +LAAK                 A  ++ A      E   +  E L  R  + AR  E+     A   G   TK E G  RWGKK +K  +  PY N   E  A+    GA V  GGKK  +   KK         + GFVR  +PHH  Y GP
Sbjct:   12 SLGKALQRRQAQQLAEKRANARFDVDGSVTRGKYVSVLEANSLEDFIASAMLSEREFESHKAHTVILDGATGEKLRIDADDTHVAVETDETAAAAAH-------VFGFEQMGVPRRPPWDAGMSAEDLDKAEKTAFIEWRREIARLEEEKAGLKVTPFEKNIEVWRQLWRVLEKSDLVVQIVDARNPLFYYSRDLLAYARELDPPKPVIILVNKSDYLTAAQRREWAAHFMRQGWQGLFFSARAAQVKLNREARIARGLEMATADD---AAAEDADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAPELQ---------------DGASETAGSGGSXXXXXXXXXXXXXXDESNSEFEREVARRARVLSREELLHVIEHLARSLGAASAARSAERHHGRACVGMVGYPNVGKSSVINALAGATPFSHGATARVSVGATPGKTKHFQTLALSPSLLLCDCPGLVFPSFVSSAAEMICAGVLPIMQMRDALAPIALVARRVPRHILELTYTIXXXXXXXXXXXXXXXXXXXXXXXXXXXALATRPPTATEVLTAFCESRGLYRPGGLGDYDLPRAARMLLKDYTEGTLLFCHPPPDLSDAAAVAAFLRETERTHLSSGRLAAKLAEQQRK----------AYGASSAQQQGGGEGGVVDGEALTAR--LKARADEIRAREAAAMDG--PTKVEQGFKRWGKKSKKYRDPTPYAN--WEGGAAAAARGASVQRGGKKPNKKLAKKAAAVVGEGEQQGFVRAMLPHHAGYEGP 748          
BLAST of mRNA_E_fasciculatus_S2_contig7964.16118.1 vs.
Match: G (domain-containing protein n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3A0_9STRA)

HSP 1 Score: 382 bits (981), Expect = 8.670e-119
Identity = 308/740 (41.62%), Postives = 402/740 (54.32%), Query Frame = 2
Query:   62 LGKALQRRRAQERAAADSASSYD-VDGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVV--GPDGLEMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEM-KVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGRGVAVLFFSARQQQEQLNREAREER----DIADGGLGAGAPAPDAYDSXXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKSLRVLSRLEMCVELERLARTLGSP------DPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGD-------ARDTAGNAM--LSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAPEAIARFLKET-DKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLQQPENIDLMAEVLEKRAVVAAREAELGLTVGAGGKGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKK--GRR--GKKRDGFVRNTMPHHQTYAG 2197
            +G+AL R+  Q+  AA  A     +DG K   +++SVLE ++LDDF+ +AMM++R F + KE  ++V     G   S+   G++   A    D G   F F  + +PRRP W  GM+A  LD  E+ SFLEWRR IA  EE +GE  +VTPFEKNLEVWRQLWRV+ERS ++ Q+VDAR+PLFYYS DL AYA E+ P +  +V+VNKADYL+ AQ+ EWA +F+ RG    FFSAR+ QE L  +AREER    +  DG              XXXXXXXXXXXXXXXXXXXXXXXXX G +   SA      S G  ++                      S+      +L+R E+   L+ LA  +G        +     G+A VGMVGFPNVGKSS+INV++G TPL H  VRV+V +TPGKTKHFQTL L    MLCDCPGLVFPSFV++TA+M+CAGVLPI Q+R  M P+ L+ RR+P  +L   Y +K     G+       A+++ G++    + +  L   C ARG +  +  G +D+ RAAR +L+D+ +GRL++ HPP  L  E    F   T  +   K   L+                                                        LTVG G + GK+  R     RWGKK +K+ NK PY   D E     G VG R  GGG +  GR+  G    GF R TMPH   YAG
Sbjct:   15 VGRALMRKHQQQGPAAVGAHEQQRLDGCK---QLSSVLEMNSLDDFLDTAMMAQRDFSAIKERDLLVLDAKTGGLTSILPRGQVTPGA----DKGMTTFAFRQLKVPRRPKWHTGMSAAALDRAEKASFLEWRREIAQLEETSGERARVTPFEKNLEVWRQLWRVLERSHVIVQIVDARDPLFYYSEDLHAYAAEMHPARERLVLVNKADYLTPAQRGEWATYFQKRGWNHAFFSARRAQELLTLQAREERLKELEGRDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAGGPSAPVKVSCSRGEKEE-------------------EPESRTTIFPPILTRTELIARLKGLAARVGGAFAAAALEAGHAAGKATVGMVGFPNVGKSSVINVLMGVTPLEHDRVRVAVSSTPGKTKHFQTLPLDPETMLCDCPGLVFPSFVATTADMVCAGVLPINQLREHMAPVELLCRRLPGPLLRRAYGLKERAKDGEETPAWASAKESGGSSSGCETARTFLGDLCGARGYW-TQGSGVADVNRAARMVLRDYVEGRLVYSHPPPGLTAEEGRVFEAATRGRGGGKGPALSEGLRRLALGEGRDKEEGGGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELTVGEGSRSGKVRVRPT--KRWGKKGKKLRNKTPY--EDTE-----GGVGGRAPGGGARVLGRKVVGGGEGGFTRVTMPH---YAG 715          
BLAST of mRNA_E_fasciculatus_S2_contig7964.16118.1 vs.
Match: Large (subunit GTPase 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZAV8_9STRA)

HSP 1 Score: 375 bits (962), Expect = 3.380e-117
Identity = 284/722 (39.34%), Postives = 382/722 (52.91%), Query Frame = 2
Query:   59 SLGKALQRRRAQERAAADSASSYDV---DGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVVGPDGL----EMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGRGVAVLFFSARQQQEQLNREAREERDIADGGLGAGAPAPDAYDSXXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKSLRVLSRLEMCVEL----ERLARTLGSPDPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAPEAIARFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLQQPENIDLMAEVLEKRAVVAAREAELGLTVGAGGKGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNTMPHHQTY 2191
            SLGKAL +   ++     S++   V   DG  +   + S LE S+LDDF+A+A M+ R F + KE  +V+  +GL    ++ LD+                 E DF  M IPRRP W    TA +L+ +ER+SFL+WRR IA  E  + + +VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY S DLE Y +E+   K  +++VNK+DYL+  Q+  WA +F+  G+  +FFSA++ Q +L+ E +  +++                           XXXXXXXXXXXXXXX    DA  AA A                                 + D    VL+R E+   L    ER+   +G     +  G    GMVGFPNVGKSS IN ++GA+  SH   RV+VGATPGKTKHFQT++LSD +MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+P  P   + T     +    LLE Y +ARG F     G  D  RAAR +L+D+  GRLL+CHPP  +AP   A    E  KT     K+A                    ++  E  + + P   D +   +E +A  + R                       L + GKK RK  +K+PY   D++ AA+   + A V+    +G++   +  FVR TMPHH TY
Sbjct:   10 SLGKALMKSNVKKAKELQSSAGKHVSATDGGDSTVALASYLEGSSLDDFLANATMANREFVAEKERVMVLEANGLPTLAKVDLDKV---------------PEMDFSEMKIPRRPSWDKTTTAAELNLKERQSFLDWRRDIAMLEAASEDREVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSVDLERYVKEVDEAKDVMLIVNKSDYLTPEQRIIWADYFKANGIDFVFFSAKEAQAKLDAEYKASKELL------------------LSDDEGEEXXXXXXXXXXXXXXXXXEKDAGEAAPAP------------------------------TERAD--CVVLTREELLAYLNGRAERVTARVGLRAEDK--GLVKFGMVGFPNVGKSSAINALLGASNYSHHTQRVAVGATPGKTKHFQTMILSDKIMLCDCPGLVFPSFVNSKAEMLCCGVLPISQLRDHVPPCELVARRIPRLVFESTYGIKVP-FPNSGKYTDP---VDVYVLLEVYARARG-FATAGKGGPDQSRAARVLLRDYVMGRLLYCHPPPGVAPTTPAFDPLELAKTFATADKVAL----------------LEPLSDEEGDAAKAP-GFDPVG--VESKAAASKR-----------------------LKKHGKKGRKARDKNPY--EDMDGAAATASM-AHVS----RGKKAMNQKDFVRVTMPHHATY 610          
BLAST of mRNA_E_fasciculatus_S2_contig7964.16118.1 vs.
Match: Large (subunit GTPase 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A241_9STRA)

HSP 1 Score: 372 bits (954), Expect = 6.690e-116
Identity = 288/716 (40.22%), Postives = 382/716 (53.35%), Query Frame = 2
Query:   59 SLGKALQRRRAQERAAADSASSYDV---DGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVVGPDGLEMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGRGVAVLFFSARQQQEQLNREAREERDIADGGLGAGAPAPDAYDSXXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKSLRVLSRLEMCVELERLARTLGSPDPSRNGGRACV--GMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAPEAIARFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLQQPENIDLMAEVLEKRAVVAAREAELGLTVGAGGKGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNTMPHHQTY 2191
            SLGKAL R   ++     S++   V   DG  +   + S LE S+LDDF+A+A ++ R F + KE  +V+  +G+           A     K     E DF  M IPRRP W +  TA +L+ +ER+SFL WRR IA  E+   E +VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY S DLE Y +E+   K  +++VNK+DYL+  Q+  WA +F+   +  +FFSA++ QE+L+ E +  RDI            D  D+XXXXXXXXXXXXXXXXXX       +   +A    E  +                              S   +   VL+R E+    +  A  +      R   +  V  GMVGFPNVGKSS IN ++GA+  SH   RV+VGATPGKTKHFQT++LSD +MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+P  P   R    N  +    LLE Y +ARG F     G  D  RAAR +L+D+  GRLL+CHPP  ++P           + A    +LA K                     ++    ++P N DL                     VG   K G  +KR   L R G+K RK  +++PY   D++  AS   V A ++    +G++   +  FVR TMPHH TY
Sbjct:   10 SLGKALMRTNVKKAKELQSSAGKHVSATDGGDSTVALASYLEGSSLDDFLANATLANREFIAEKERVMVLEANGMPTL--------AKLDMSKVP---EMDFSEMKIPRRPSWDSTTTAAELNMRERESFLNWRRDIAMLEQATEEREVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSIDLERYVKEVDAAKDVMLIVNKSDYLTPEQRVMWADYFKANKIDFVFFSAKEAQEKLDAEYKASRDII---------VSDEEDNXXXXXXXXXXXXXXXXXXNE-----IVSKEAPKVVEEIKP----------------------------ASSEREDCIVLTREELLEYFDGRADQVVKRVGLRADDKGLVKFGMVGFPNVGKSSAINALLGASNYSHHTQRVAVGATPGKTKHFQTMILSDKIMLCDCPGLVFPSFVNSKAEMLCCGVLPISQLRDHVPPCELVARRIPRVVFEKTYGIKVP-FPNSGRY---NDPVDVYVLLEVYARARG-FATAGKGGPDQSRAARVLLRDYVMGRLLYCHPPPGVSPS----------EPAFDPNELAKKFIVKEDDPVNALLQPL-----SDEEDEEKPTNFDL---------------------VGVDSKTG-ASKR---LKRHGRKGRKARDRNPY--EDIDGTAST--VTAHIS----RGKKQMNQKDFVRVTMPHHTTY 619          
BLAST of mRNA_E_fasciculatus_S2_contig7964.16118.1 vs.
Match: G (domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CCU5_SAPPC)

HSP 1 Score: 371 bits (953), Expect = 8.150e-116
Identity = 280/720 (38.89%), Postives = 374/720 (51.94%), Query Frame = 2
Query:   59 SLGKALQRRRAQERAAADSASSYDV---DGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVVGPDGL----EMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGRGVAVLFFSARQQQEQLNREAREERDIADGGLGAGAPAPDAYDSXXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKSLRVLSRLEMCVELERLARTLGSPDPSRNGGRACV--GMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAPEAIARFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLQQPENIDLMAEVLEKRAVVAAREAELGLTVGAGGKGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNTMPHHQTY 2191
            SLGKAL +   ++     S++   V   DG  +   + S LE S+LDDF+A+A M+ R F + KE  +V+  +GL    ++ LD+                 E DF  M IPRRPGW +  TA +L+ +ER+SFL WRR IA  E  + E  VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY S DLE Y +E+   K  ++++NK+DYL+  Q+  WA +F+   +  +FFSA++ QE+L+ E +  +D +              D       XXXXXXXXXXXXX      V  +   S                                   V    +   VL+R E+   L   A  +      R   +  V  GMVGFPNVGKSS IN ++GA+  SH   RV+VGATPGKTKHFQT++LSD +MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+P  P   +    N  +    LL+ Y +ARG F     G  D  RAAR +L+D+  GRLL+CHPP   +P   A  + E  K      K AA                  AVA  E  S ++ ++              AA+       VG   K    T     L + GKK RK  +K+PY + D   + ++  +         +G++   +  FVR TMPHH TY
Sbjct:   10 SLGKALMKTNVKKAKELQSSAGKHVSATDGGDSTVALASYLEGSSLDDFLANATMANREFVAEKERVMVLEANGLPTLAKVDLDKV---------------PEMDFSEMKIPRRPGWDSTTTAAELNMRERESFLNWRRDIAMLEAASEERDVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSVDLERYVKEVNSAKDCMLIINKSDYLTPEQRLIWADYFKANAIDFVFFSAKEAQEKLDAEYKASKDFS------------LSDDEGELDDXXXXXXXXXXXXXTKPAPIVAETPKQS-----------------------------------VPAEREDCVVLTREELLEYLSGRADKVVERVGLRADDKGLVKFGMVGFPNVGKSSAINALLGASNYSHHTQRVAVGATPGKTKHFQTMILSDKIMLCDCPGLVFPSFVNSKAEMLCCGVLPISQLRDHVPPCELVARRIPRLVFESTYGIKIP-FPNSGKY---NDPVDVYTLLDVYARARG-FATAGKGGPDQSRAARVLLRDYVIGRLLYCHPPPGTSPREPAFDVMELAK------KFAASED---------------AVARLEPLSDEEGDD--------------AAKTPGFD-PVGIENK----TAASKRLKKHGKKGRKARDKNPYEDLDGVASTTMAHI--------SRGKKAMNQKDFVRVTMPHHVTY 614          
BLAST of mRNA_E_fasciculatus_S2_contig7964.16118.1 vs.
Match: Large (subunit GTPase 1 n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NWZ7_PHYIT)

HSP 1 Score: 364 bits (935), Expect = 2.450e-113
Identity = 253/683 (37.04%), Postives = 353/683 (51.68%), Query Frame = 2
Query:  134 DGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVV-----GPDGLEMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGRGVAVLFFSARQQQEQLNREAREERDIADGGLGAGAPAPDAYDSXXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKSLRVLSRLEMCVELERLARTLGSPDPSRNGGRACV--GMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAPEAI--------ARFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLQQP---ENIDLMAEVLEKRAVVAAREAELGLTVGAGGKGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKK 2128
            DG  A   + S LE S+LDDF+ASA+++ R F + KE+ +++     GP  +E   +   E+                F  M +PRRP W   MTAE+L+  E++SFLEWRR IA  E  +  ++VTPFEKNLEVWRQLW V ERSD++ Q+VDARNPLFY STDL+AYA+E   P+ T++VVNK+D+L   Q+  W  HF+   +  +FFSA++ Q++++ EA++ R          A + D Y+                          V  +DA    EA                                ++      VLSR+E+   + ++A  +      R   +  +  GMVGFPNVGKSS+IN ++GA+  SH   RV+VGATPGKTKHFQT++LSD +MLCDCPGLVFPSFV+S AEM C GVLP+ Q+R+ + P  L+  RIPR + E TY IK+P+    A++T    + +   LLESY + RG +     G  D  RAAR IL+ + +GRLL+CHPP D++   I        A+F    D   L TT+                        S E  S  +P   +N+D    V +KRAV                     +KR   L + G+K RK  +K+PY + D    A+    G R+  GGKK
Sbjct:   44 DGGDASVALASYLEGSSLDDFLASAVLANREFTAVKESIMLMEEADAGPQVVEKDKNVMPEMT---------------FAEMKVPRRPQWDKSMTAEELNRMEKESFLEWRRDIAILEASSDHLEVTPFEKNLEVWRQLWHVRERSDIMVQIVDARNPLFYRSTDLDAYAKEGETPRRTLLVVNKSDFLDERQRTAWGDHFKKENINFVFFSAKEAQDEIDEEAKKLRQEQ-----RNAESHDQYNE-------------------------VKPADAPQVVEAEAVD---------------------------ATEDSSPYSVLSRVELLDYVTKIATEVLDEVGVRVKDKGLIKFGMVGFPNVGKSSVINALLGASTYSHKTQRVAVGATPGKTKHFQTMILSDKIMLCDCPGLVFPSFVNSKAEMYCCGVLPLSQLRDHVSPCQLLCHRIPRRVFERTYGIKIPI-SKTAKETDSVGIYA---LLESYARNRG-YTTTGKGGPDTSRAARDILRHYVNGRLLYCHPPPDVSDSTIFDIHDLAKAQFPDLDDSIVLHTTENEI---------------------SEEVTSPPEPNVDKNLDFDTTVEDKRAV---------------------SKR---LKKHGRKGRKGRDKNPYEDSDFPGGAA----GVRINSGGKK 600          
BLAST of mRNA_E_fasciculatus_S2_contig7964.16118.1 vs.
Match: Aste57867_12475 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVN8_9STRA)

HSP 1 Score: 363 bits (933), Expect = 6.090e-113
Identity = 279/716 (38.97%), Postives = 375/716 (52.37%), Query Frame = 2
Query:   59 SLGKALQRRRAQERAAADSASSYDV---DGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVVGPDGLEMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGRGVAVLFFSARQQQEQLNREAREERDIADGGLGAGAPAPDAYDSXXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKSLRVLSRLEMCVELERLARTLGSPDPSRNGGRACV--GMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAPEAIARFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLQQPENIDLMAEVLEKRAVVAAREAELGLTVGAGGKGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNTMPHHQTY 2191
            SLGKAL +  ++      S++   V   DG  A  ++ S LE S+LDDF+A+A ++ R F + KE  VV         L+ +G    A          E DF+ M +PRRP W    TA++L+ +ER+SFL WRR +A  E+ + +  VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY STDLE Y +E+   K  +++VNK+D+L+ AQ+  WA +F    +  +FFSA++ QE L+ E ++    A+  +            XXXXXXXXXX               V R+D                                              +VLSR ++   +E  ++ + +    R   +  +  GMVGFPNVGKSS IN ++GA+  +H   RV+VGATPGKTKHFQTLVLSD++MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+PV P   +    N  +    +LE Y +ARG F     G  D  RAARQ+L+D+ +G+LL+CHPP  ++P   A    E  K+ +    +                     V   E      P   DL A  + K AV                     +KR   L R GKK RK  +K+PY   D++ AA+   V A V+ G K  RR  K   F R T PHH TY
Sbjct:   10 SLGKALAKTSSKSVKEIQSSAGKHVAVADGGDATVQLASYLEGSSLDDFLANATLANREFVAEKERIVV---------LEAHGTPTLAKFDPSKL--PEMDFKEMKVPRRPHWDETTTAQELNLRERESFLSWRRDLALLEQSSEDRDVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSTDLEKYVKEVDEKKEVMLIVNKSDFLTPAQRVAWADYFASEKIDYVFFSAKEAQELLDAEYKQ----ANVNVELSEDEEXXXXXXXXXXXXXXXPKDVAVEEKQPAAADVERADC---------------------------------------------KVLSREDLLEYMENRSKDVLARVGLRAEDKGLIKFGMVGFPNVGKSSAINALLGASNYAHHAQRVAVGATPGKTKHFQTLVLSDAIMLCDCPGLVFPSFVNSKAEMLCCGVLPISQLRDHVPPCELVARRIPRVVFEKTYGIKVPV-PNTGKY---NDDVDVYSVLEVYARARG-FTTTGKGGPDTSRAARQLLRDYVNGKLLYCHPPPGVSPTTAAFNPLELAKSFVGDAAMLL-------------------VLGGEEDD-DGPAGFDL-AGAVNKPAV---------------------SKR---LKRHGKKGRKARDKNPY--EDLDAAAAQ--VTAHVSRGKKADRRDAK---FTRVTHPHHLTY 608          
BLAST of mRNA_E_fasciculatus_S2_contig7964.16118.1 vs.
Match: G (domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKI7_9STRA)

HSP 1 Score: 362 bits (930), Expect = 1.270e-112
Identity = 262/724 (36.19%), Postives = 363/724 (50.14%), Query Frame = 2
Query:   44 KRGQESLGKALQRRRAQERAAADSASSYDV---DGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVVGPDGLEMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGRGVAVLFFSARQQQEQLNREAREERDIADGGLGAGAPAPDAYDSXXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKSLRVLSRLEMCVELERLARTLGSPDPSRNGGRACV--GMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAPE--AIARFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLQQPENIDLMAEVLEKRAVVAAREAELGLTVGAGGKGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRD-GFVRNTMPHHQTY 2191
            K+G  SLGKAL +  ++      S++   V   DG  A  ++ S LE S+LDDF+A+A ++ R F + KE  VV+  +G+         +NA+          E DF  M +PRRP W    +  +L+ +ER+SFL WRR IA  E+ + +  VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY S DLE Y +E+   K  +++VNK+DYL+ AQ+  WA +F  + +  +FFSA++ QE L+ E                     Y               XXX               S  ++  R                                     +VLSR ++   +   A+ + +    R   +  V  GMVGFPNVGKSS IN ++GA+  +H   RV+VGATPGKTKHFQTL+LSD++MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+PV P   + T     +    +LE Y +ARG F A   G  D  RAAR IL+D+ +G+LL+ HPP  + P   A        D   +  T+L A+                          ++  +  DL+   +  + +V+ R                       L R GKK RK  +K+PY + D   +A    V         +G++  +RD  F R T+PHH TY
Sbjct:    5 KKGGTSLGKALLKTGSKAVKEVKSSAGKHVAAADGGDAAVQLASYLEGSSLDDFLANATLANREFVAEKERVVVLEANGMPTLAT----LNASELP-------EMDFTEMKVPRRPHWDETTSPAELNLRERESFLNWRRDIAMLEQASEDRDVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSIDLERYVKEVDEKKQVMLIVNKSDYLTPAQRIAWADYFASQSIDFVFFSAKEAQELLDAE---------------------YKKASKAIILEEDEDEXXXDDGEIEDYTEEEKPTSQPSKTER----------------------------------PECKVLSREDLLAYMAERAKEVLARVGVRAEDKGLVKFGMVGFPNVGKSSAINALLGASNFAHNAQRVAVGATPGKTKHFQTLILSDTIMLCDCPGLVFPSFVNSKAEMLCCGVLPISQLRDHVPPCELVARRIPRVVFEKTYGIKIPV-PKTGKYTDP---VDVYTVLEVYARARG-FAATGKGGPDTSRAARAILRDYVNGKLLYSHPPPGVKPSDPAFDPLELAKDFVGIDVTELEAE--------------------------MEAAQGFDLVG--IGSKPIVSKR-----------------------LKRHGKKGRKARDKNPYEDLDATASAMTAHV--------SRGKKADRRDTAFTRVTLPHHATY 598          
BLAST of mRNA_E_fasciculatus_S2_contig7964.16118.1 vs.
Match: CP-type (G domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TX60_9STRA)

HSP 1 Score: 360 bits (924), Expect = 1.380e-111
Identity = 266/693 (38.38%), Postives = 360/693 (51.95%), Query Frame = 2
Query:  131 VDGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVV----GPDGLEMSLDENGEINAAAGSGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANAEEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGRGVAVLFFSARQQQEQLNREAREERDIADGGLGAGAPAPDAYDSXXXXXXXXXXXXXXXXXXXXXXXXXVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVSKGDKSLRVLSRLEMCVELERLARTLGSPDPSR--NGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLAPEAIARFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLQQPENIDLMAEVLEKRAVVAAREAELGLTVGAGGKGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKRDGFVRNTMPHHQTY 2191
             DG  A  ++ S LE S+LDDF+A+A ++ R F + KE  VV+    GP      L     +N               F  M +PRRP W A  T  +L+ +ER+SFL WRR IA  E  +G  +VTPFEKNLEVWRQLWRVIERSD+V Q+VDARNPLFY S DLE Y +E+   K  +++VNK+D+L+ AQ+  WA +F  + V  +FFSA++ QE L+ E ++     +                                    XXXX    D ++       ++  A   HA                  V +     +VL+RL++   +ER A+ +      R  + GR   GMVGFPNVGKSS IN ++GA+  +H   RV+VGATPGKTKHFQTL LSD++MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP  L+ARRIPR + E TY IK+PV P   +    N  ++   +LE Y +ARG F        D  RAAR +L+D+ +G+LL+CHPP  +            D   L+   L                              +  ++I  + + L  R     + A+  L  GA  K   L+KR   L + GKK RK  +K+PY   D++ AA+   V A V+ G K  RR K    F R T+PHH TY
Sbjct:   38 ADGGDATAQLASYLEGSSLDDFLANATLANREFVAEKERIVVLESRGGPTLATTDLSSLPSMN---------------FTEMKVPRRPHWDATTTPAELNLRERESFLNWRRDIAILEAADGAREVTPFEKNLEVWRQLWRVIERSDIVVQIVDARNPLFYRSLDLERYVKEVDANKQVMLIVNKSDFLTAAQRLAWADYFASQNVDFVFFSAKEAQELLDAEYKKSTMTLE-----------------------------LSEDEESXXXXXXXXDENAEEVTPAITATTAVPTHA------------------VDEERADCKVLTRLDLLEYMERRAKAVVGKVGLRAEDRGRVKFGMVGFPNVGKSSAINALLGASNFAHHAQRVAVGATPGKTKHFQTLALSDTIMLCDCPGLVFPSFVNSKAEMLCCGVLPIAQLRDHVPPCELVARRIPRVVFEETYGIKVPV-PNTGKY---NDPVNVYTVLEVYARARG-FTTTGKSGPDTSRAARVLLRDYVNGKLLYCHPPPSV------------DVNDLRFNPL------------------------------ELAKDIGGVVDELLARDDEDGKPAKFDLA-GADSKR-VLSKR---LKKHGKKGRKGRDKNPY--EDLDNAAAA--VTAHVSRGKKIDRREKA---FTRVTLPHHATY 609          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7964.16118.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G0.000e+091.08domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Lsg1,8.120e-17949.23cytoplasmic GTPase n=1 Tax=Tribonema minus TaxID=3... [more]
G8.670e-11941.62domain-containing protein n=2 Tax=Nannochloropsis ... [more]
Large3.380e-11739.34subunit GTPase 1 n=1 Tax=Achlya hypogyna TaxID=120... [more]
Large6.690e-11640.22subunit GTPase 1 n=1 Tax=Thraustotheca clavata Tax... [more]
G8.150e-11638.89domain-containing protein n=2 Tax=Saprolegnia TaxI... [more]
Large2.450e-11337.04subunit GTPase 1 n=3 Tax=Phytophthora infestans Ta... [more]
Aste57867_124756.090e-11338.97protein n=1 Tax=Aphanomyces stellatus TaxID=120398... [more]
G1.270e-11236.19domain-containing protein n=1 Tax=Aphanomyces eute... [more]
CP-type1.380e-11138.38G domain-containing protein n=1 Tax=Aphanomyces in... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7964contigE_fasciculatus_S2_contig7964:3182..6958 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1219.9
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7G7R6
Model size2209
KEGG koko:K14539
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000054,GO:0000166,GO:0001882,GO:0001883,GO:0003006,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005783,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006403,GO:0006405,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009790,GO:0009791,GO:0009793,GO:0009966,GO:0009987,GO:0010154,GO:0010467,GO:0010646,GO:0010817,GO:0012505,GO:0015030,GO:0015031,GO:0015833,GO:0015931,GO:0016070,GO:0016072,GO:0016462,GO:0016604,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022414,GO:0022613,GO:0023051,GO:0031503,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0033036,GO:0033750,GO:0034470,GO:0034613,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0042254,GO:0042886,GO:0043021,GO:0043022,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044877,GO:0045184,GO:0046483,GO:0046626,GO:0046907,GO:0048316,GO:0048366,GO:0048367,GO:0048518,GO:0048583,GO:0048608,GO:0048731,GO:0048825,GO:0048827,GO:0048856,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051049,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0090069,GO:0090070,GO:0090304,GO:0097159,GO:0097367,GO:0099402,GO:1900076,GO:1901265,GO:1901360,GO:1901363,GO:2000012
Exons5
EggNOG free text desc.Large subunit GTPase 1
EggNOG OGsCOG1161@1,KOG1424@2759
Ec32 ortholog descriptionLsg1, cytoplasmic GTPase involved in the ribosome assembly
Ec32 orthologEc-06_000630.1
Cds size2190
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7964.16118.1prot_E_fasciculatus_S2_contig7964.16118.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7964 3182..6939 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842456.3994226-CDS-E_fasciculatus_S2_contig7964:3181..36671696842456.3994226-CDS-E_fasciculatus_S2_contig7964:3181..3667Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7964 3182..3667 -
1696842456.413941-CDS-E_fasciculatus_S2_contig7964:4185..45221696842456.413941-CDS-E_fasciculatus_S2_contig7964:4185..4522Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7964 4186..4522 -
1696842456.431891-CDS-E_fasciculatus_S2_contig7964:4677..55981696842456.431891-CDS-E_fasciculatus_S2_contig7964:4677..5598Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7964 4678..5598 -
1696842456.4466658-CDS-E_fasciculatus_S2_contig7964:6076..64271696842456.4466658-CDS-E_fasciculatus_S2_contig7964:6076..6427Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7964 6077..6427 -
1696842456.4576752-CDS-E_fasciculatus_S2_contig7964:6844..69391696842456.4576752-CDS-E_fasciculatus_S2_contig7964:6844..6939Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7964 6845..6939 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842456.4690819-UTR-E_fasciculatus_S2_contig7964:6939..69581696842456.4690819-UTR-E_fasciculatus_S2_contig7964:6939..6958Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7964 6940..6958 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7964.16118.1

>prot_E_fasciculatus_S2_contig7964.16118.1 ID=prot_E_fasciculatus_S2_contig7964.16118.1|Name=mRNA_E_fasciculatus_S2_contig7964.16118.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=730bp
MPYGKSNPKRGQESLGKALQRRRAQERAAADSASSYDVDGSKARGKMTSV
LEASNLDDFIASAMMSERAFESHKENTVVVGPDGLEMSLDENGEINAAAG
SGKDAGNDEFDFEHMNIPRRPGWAAGMTAEDLDYQERKSFLEWRRGIANA
EEKNGEMKVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLE
AYAREIAPPKPTVVVVNKADYLSRAQQREWARHFRGRGVAVLFFSARQQQ
EQLNREAREERDIADGGLGAGAPAPDAYDSEDGDDDTDDDFEADTEGDGE
EEEDEVGRSDASSAAEAARFSSGVAKKGHAGGGEGANSSAGGRGSGTGVS
KGDKSLRVLSRLEMCVELERLARTLGSPDPSRNGGRACVGMVGFPNVGKS
SLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVF
PSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPV
LPGDARDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKD
FTDGRLLFCHPPADLAPEAIARFLKETDKTALKTTKLAAKLALQLSKAEA
KASAGGAAVASAEAASLQQPENIDLMAEVLEKRAVVAAREAELGLTVGAG
GKGGKLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGG
GKKGRRGKKRDGFVRNTMPHHQTYAGPAV*
back to top

mRNA from alignment at E_fasciculatus_S2_contig7964:3182..6958-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7964.16118.1 ID=mRNA_E_fasciculatus_S2_contig7964.16118.1|Name=mRNA_E_fasciculatus_S2_contig7964.16118.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3777bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7964:3182..6958- (Ectocarpus fasciculatus EfasUO2)
AACGTGGACGGGCCCAAGCATGCCTTATGGAAAAAGTAACCCGAAGCGGG GACAAGAGTCTCTTGGAAAAGCGCTCCAGCGACGCCGTGCGCAAGAGCGA GCTGCGGCTGACAGGTGTGTCAAATCTGACCACAACAAGGTCAAGCCTAC AATATTGCATCAGCAGTGTTACAGCAGGGGCAGCGGACGGGCGCTGCCGT ACAGACCTCGCCATTCTTGCTGACTATTCACGCTGCGCTTAGGCGCGTAG GGGAAACGACAAAGGCCTGTCGCTGGTCTCATCCGGCTTTGGTTAAGTGT TGGGTTGGGGGATAGGCGATTGTTTCGGTGCGCGTCTAGGCACCCACTAC CCCTAGAGCAAGCAACCCACCGCTTCCGTTTCGATATGTGGACCGGCTCT ATTATGCGGGGCTCACGTAATACTGCTGGTAGACATCTCTTTACCCATGG TTGCTGTCCATATCCCACCATCTCTTCACTAACCACGCTACCACCCCCGT ACTTGCTGTGTGTCCACCCACGCGCAAACAGCGCGTCGTCGTACGATGTG GACGGCAGCAAGGCTCGCGGCAAGATGACCTCGGTGCTCGAGGCCAGCAA CCTCGACGACTTCATCGCCTCCGCCATGATGTCGGAGCGAGCCTTCGAGT CCCACAAGGAGAACACGGTCGTGGTCGGGCCCGACGGCTTGGAGATGAGC CTGGACGAGAACGGCGAGATCAACGCCGCCGCCGGGAGCGGGAAGGACGC CGGCAATGACGAGTTCGACTTCGAGCACATGAACATCCCGAGACGCCCGG GTTGGGCGGCGGGCATGACCGCCGAGGATCTAGACTACCAGGAGAGGAAG TCTTTTCTCGAGTGGCGGAGAGGAATTGCAAAGTGAGCGCATATGTGCGG CAATCAATCTCATGTCCAGTCTAGCAGAGGCACCCGTCGCTGTCTTTGTT GTGTGTGTGGGTCGGCCTTGCTTGCCTCTCAGTGGATAGTATCGGTGTGA TGAACAAACACATTTTGCGAGCTTTTTTCGCCTTTCGACAACATGCCGCC TTTCTGTTGGCGCTACAGCAGCAGCACGTCCCGACCCATCGAGTTTGTAC GGACGGGACCCGTACGATGGACGCAGCTCTCGCTTTGCTTTATGCAAATA TTTGCCGAACGCAGCTCGTCTACCGATGCCCGTGAACGTGCCACCTGCTA CGGTACACACACAGATGAGGGTCCTATTGATAAATTTGCATCCACCGCGG TTTGTTTGGGAGCAGGATAGTAGCGTGTCGCCCCGTTGCCACCGACGAAG TGTACACGTGATTGATTTCGTTCTTCCCCCTCCGGACGCCACAACCACGC TCCGTTGCAGCGCCGAAGAGAAGAACGGTGAGATGAAGGTCACGCCCTTC GAGAAGAACCTGGAGGTGTGGCGACAGCTTTGGCGCGTCATCGAACGGAG CGACCTCGTCTGCCAGCTGGTCGACGCCCGCAACCCGCTCTTCTACTACT CCACCGACCTCGAGGCCTACGCGAGGGAGATCGCGCCGCCGAAGCCCACC GTGGTTGTGGTGAACAAGGCCGACTACCTGAGCCGAGCGCAGCAGAGGGA GTGGGCGCGGCACTTCCGGGGGCGAGGGGTCGCCGTGCTGTTCTTCTCGG CCCGACAGCAGCAAGAGCAGCTCAACCGGGAGGCCAGAGAAGAGAGGGAT ATTGCTGACGGCGGACTGGGCGCAGGCGCTCCTGCCCCGGATGCCTATGA CTCCGAGGACGGCGATGACGATACTGATGACGATTTCGAGGCGGACACGG AGGGTGATGGGGAAGAGGAGGAAGATGAAGTTGGGCGATCGGATGCGTCT TCCGCTGCAGAGGCGGCGCGTTTCTCTTCGGGGGTGGCGAAGAAAGGCCA TGCTGGCGGGGGGGAAGGCGCGAATTCTTCGGCAGGGGGCCGAGGGAGCG GGACCGGCGTAAGCAAGGGGGACAAGTCGCTGCGGGTGCTGAGCAGACTT GAAATGTGCGTCGAGCTCGAGCGGCTTGCGAGGACTCTTGGGTCGCCGGA CCCTTCGCGAAACGGCGGGCGGGCCTGCGTCGGAATGGTCGGGTTCCCCA ACGTGGGGAAGAGCAGCCTGATCAACGTGATGGTCGGGGCGACGCCGCTG TCGCACGGTGGTGTGCGGGTCAGCGTCGGTGCCACCCCGGGCAAGACGAA GCACTTTCAGACGCTGGTGCTCAGCGACAGCCTCATGCTGTGCGATTGTC CAGGTCTCGTGTTTCCAAGTTTCGTTAGCAGGTGAGCGCAGGCAGGTCGG TCGCCCGGTAAATACGAGTAGGCGTGCACCGTACCAACGTTGTCGTGTTC TTTTGATGTCGGAAATACCTGCCCCCGTCGACCCACCTTTCTTTTCCCCC ATGCTGTGGTTTCCTGGGTCGGTGGCAACGCTACAGCACGGCCGAAATGA TTTGTGCTGGAGTGTTGCCCATCATGCAGATGCGGAACGTCATGCCCCCC ATGGCCCTCATCGCGCGACGAATACCTCGACACATCCTCGAGATCACCTA CACCATCAAGCTCCCGGTCCTCCCGGGGGACGCCAGGGATACGGCGGGAA ACGCCATGCTCTCGCCGCAGCAGCTCCTGGAGTCGTACTGCCAGGCAAGA GGACTGTTCCGCGCCCGCGCCCTCGGGGAGTCAGACATGCCGCGCGCGGC GCGGCAGATCCTCAAGGACTTCACGGATGGACGGCTTTTGTTTTGCCATC CGCCTGCCGACCTGGCTCCAGAGGTGGGTAACTCGTATGTTTGCCGCGGT TGCTTCCCGAAGTATTTGTTAGAAATAAGCTGGAATGATCTCTCCCCGGT GTTGTTTCGAGGCGCCTTGGTGGCCGCATGGGCCATATGCGCGCGCGTGA GGTGACTAACCCTGCCGTGCGCACGTGGCCCCTATTTGAAGGATATCAGG GACTAGCCTAGCCCTGCCGTGCGCCCGTCTTGGTTGTATGTACGATACTC CTATGATATATTAGCGGCTACCGACGACGGTTCATCGCTAACCACCACCA CCAATCTGCCGTGGGCACTTGTTCCACGTGCAGCATGTATTGGGCTCGTT TGCCAAGTTTCTGCCCGCCGCCATTCCGAATGCCACCCATTGCCTAAAGT AGTTGGGAAAATGGAACAAGTGGCCATAATAAAGTCCGACCCTCTGTTGC CTATTTCCAGTTGTCCTTTCTCACGATATTGTTCGCGTTGCTCCGGTATA TTTGATGACGTTTATGACGTTCTGCGCGCGAGGAAACGCAGGCCATCGCC CGGTTCCTCAAGGAGACCGACAAGACGGCTCTCAAGACCACTAAGCTCGC CGCCAAGCTCGCCTTGCAGCTCAGCAAGGCGGAGGCAAAGGCGAGCGCGG GGGGCGCGGCCGTCGCGTCCGCCGAAGCGGCGTCTCTCCAGCAGCCAGAA AACATTGACCTCATGGCAGAGGTTCTGGAGAAGAGGGCGGTGGTAGCGGC CCGCGAAGCCGAGCTAGGTCTTACGGTCGGCGCGGGTGGCAAGGGCGGGA AGCTGACCAAGAGAGAGATGGGGCTCCTGCGGTGGGGCAAGAAAGACCGA AAGGTCGGGAACAAGGACCCGTACGGCAACCCGGACGTCGAGACCGCGGC GTCGCTCGGGCCGGTAGGGGCGAGGGTAGCGGGGGGGGGGAAGAAGGGGC GGAGGGGCAAGAAGAGGGACGGCTTTGTCCGGAATACGATGCCGCACCAC CAGACGTACGCGGGGCCTGCTGTATGA
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7964:3182..6958-

>mRNA_E_fasciculatus_S2_contig7964.16118.1 ID=mRNA_E_fasciculatus_S2_contig7964.16118.1|Name=mRNA_E_fasciculatus_S2_contig7964.16118.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2190bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7964:3182..6958- (Ectocarpus fasciculatus EfasUO2)
ATGCCTTATGGAAAAAGTAACCCGAAGCGGGGACAAGAGTCTCTTGGAAA
AGCGCTCCAGCGACGCCGTGCGCAAGAGCGAGCTGCGGCTGACAGCGCGT
CGTCGTACGATGTGGACGGCAGCAAGGCTCGCGGCAAGATGACCTCGGTG
CTCGAGGCCAGCAACCTCGACGACTTCATCGCCTCCGCCATGATGTCGGA
GCGAGCCTTCGAGTCCCACAAGGAGAACACGGTCGTGGTCGGGCCCGACG
GCTTGGAGATGAGCCTGGACGAGAACGGCGAGATCAACGCCGCCGCCGGG
AGCGGGAAGGACGCCGGCAATGACGAGTTCGACTTCGAGCACATGAACAT
CCCGAGACGCCCGGGTTGGGCGGCGGGCATGACCGCCGAGGATCTAGACT
ACCAGGAGAGGAAGTCTTTTCTCGAGTGGCGGAGAGGAATTGCAAACGCC
GAAGAGAAGAACGGTGAGATGAAGGTCACGCCCTTCGAGAAGAACCTGGA
GGTGTGGCGACAGCTTTGGCGCGTCATCGAACGGAGCGACCTCGTCTGCC
AGCTGGTCGACGCCCGCAACCCGCTCTTCTACTACTCCACCGACCTCGAG
GCCTACGCGAGGGAGATCGCGCCGCCGAAGCCCACCGTGGTTGTGGTGAA
CAAGGCCGACTACCTGAGCCGAGCGCAGCAGAGGGAGTGGGCGCGGCACT
TCCGGGGGCGAGGGGTCGCCGTGCTGTTCTTCTCGGCCCGACAGCAGCAA
GAGCAGCTCAACCGGGAGGCCAGAGAAGAGAGGGATATTGCTGACGGCGG
ACTGGGCGCAGGCGCTCCTGCCCCGGATGCCTATGACTCCGAGGACGGCG
ATGACGATACTGATGACGATTTCGAGGCGGACACGGAGGGTGATGGGGAA
GAGGAGGAAGATGAAGTTGGGCGATCGGATGCGTCTTCCGCTGCAGAGGC
GGCGCGTTTCTCTTCGGGGGTGGCGAAGAAAGGCCATGCTGGCGGGGGGG
AAGGCGCGAATTCTTCGGCAGGGGGCCGAGGGAGCGGGACCGGCGTAAGC
AAGGGGGACAAGTCGCTGCGGGTGCTGAGCAGACTTGAAATGTGCGTCGA
GCTCGAGCGGCTTGCGAGGACTCTTGGGTCGCCGGACCCTTCGCGAAACG
GCGGGCGGGCCTGCGTCGGAATGGTCGGGTTCCCCAACGTGGGGAAGAGC
AGCCTGATCAACGTGATGGTCGGGGCGACGCCGCTGTCGCACGGTGGTGT
GCGGGTCAGCGTCGGTGCCACCCCGGGCAAGACGAAGCACTTTCAGACGC
TGGTGCTCAGCGACAGCCTCATGCTGTGCGATTGTCCAGGTCTCGTGTTT
CCAAGTTTCGTTAGCAGCACGGCCGAAATGATTTGTGCTGGAGTGTTGCC
CATCATGCAGATGCGGAACGTCATGCCCCCCATGGCCCTCATCGCGCGAC
GAATACCTCGACACATCCTCGAGATCACCTACACCATCAAGCTCCCGGTC
CTCCCGGGGGACGCCAGGGATACGGCGGGAAACGCCATGCTCTCGCCGCA
GCAGCTCCTGGAGTCGTACTGCCAGGCAAGAGGACTGTTCCGCGCCCGCG
CCCTCGGGGAGTCAGACATGCCGCGCGCGGCGCGGCAGATCCTCAAGGAC
TTCACGGATGGACGGCTTTTGTTTTGCCATCCGCCTGCCGACCTGGCTCC
AGAGGCCATCGCCCGGTTCCTCAAGGAGACCGACAAGACGGCTCTCAAGA
CCACTAAGCTCGCCGCCAAGCTCGCCTTGCAGCTCAGCAAGGCGGAGGCA
AAGGCGAGCGCGGGGGGCGCGGCCGTCGCGTCCGCCGAAGCGGCGTCTCT
CCAGCAGCCAGAAAACATTGACCTCATGGCAGAGGTTCTGGAGAAGAGGG
CGGTGGTAGCGGCCCGCGAAGCCGAGCTAGGTCTTACGGTCGGCGCGGGT
GGCAAGGGCGGGAAGCTGACCAAGAGAGAGATGGGGCTCCTGCGGTGGGG
CAAGAAAGACCGAAAGGTCGGGAACAAGGACCCGTACGGCAACCCGGACG
TCGAGACCGCGGCGTCGCTCGGGCCGGTAGGGGCGAGGGTAGCGGGGGGG
GGGAAGAAGGGGCGGAGGGGCAAGAAGAGGGACGGCTTTGTCCGGAATAC
GATGCCGCACCACCAGACGTACGCGGGGCCTGCTGTATGA
back to top