mRNA_E_fasciculatus_S2_contig7953.16111.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7953.16111.1
Unique NamemRNA_E_fasciculatus_S2_contig7953.16111.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: PUB (domain, zinc finger protein Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G613_ECTSI)

HSP 1 Score: 482 bits (1241), Expect = 1.050e-165
Identity = 285/307 (92.83%), Postives = 295/307 (96.09%), Query Frame = 1
Query:    1 AVAGGVAQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGGPSAAXXXXXXXXXXXXXXXPSEEQQPAAKVEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEESRLFMSMEARDEALLANAKEKLEEAIASYVPTKAS 921
            + AGGVAQSLKCD+C VTL+DMAAAELHASKTSH +FSEST+ VKALTPEEK  KLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTK+EMQAIARKNEIAR +KEKQAF+QERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGGPSAAXXXXXXXXXXXXXXX  EE+QPA K EKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEESRLFMSMEARDE LLANAKEKLE+AIASYVPTKAS
Sbjct:  288 SAAGGVAQSLKCDDCNVTLKDMAAAELHASKTSHDNFSESTEEVKALTPEEKEAKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKEEMQAIARKNEIARIRKEKQAFDQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGGPSAAXXXXXXXXXXXXXXXXXEEEQPAVKAEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEESRLFMSMEARDEGLLANAKEKLEDAIASYVPTKAS 594          
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: PUB (domain, zinc finger protein thioredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z023_9STRA)

HSP 1 Score: 257 bits (657), Expect = 5.510e-78
Identity = 174/307 (56.68%), Postives = 215/307 (70.03%), Query Frame = 1
Query:    1 AVAGGVAQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGG--PSAAXXXXXXXXXXXXXXXPSEEQQPAAKVEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKE----ESRLFMSMEARDEALLANAKEKLEEAIASY 903
            + A   A SLKCD+CG  LRDM AAELHA KT HS+FSES + +  LTPEE+A K+  +K  +A RR AR EEEK + V REKARRTMGKE   T++EM+A AR  EI   KKEK   ++ER RL+AEIAKDKAERKARGGKL+ KLGV+GY+P   Q +  G  PSA XXXXXXXXXXXX    +  +Q A           KA+++L++Q VAG GGTAMKT   YI N L  P EEK+R+I+LDN AFK R+A C+GGV LL+A+GFAK     E+RL MS +ARDEALL   K +++ A+A+Y
Sbjct:  287 SAAEAAANSLKCDDCGALLRDMVAAELHAHKTGHSNFSESKEEITPLTPEERAAKVQALKDRLAARRTAREEEEKAESVTREKARRTMGKEMRATREEMEAQARMREIQMRKKEKLDAQRERERLRAEIAKDKAERKARGGKLAGKLGVEGYQPVGLQQMDDGSAPSAXXXXXXXXXXXXXASRDARLEQAA-----------KAIELLSQQRVAGEGGTAMKTINIYIGNVLAHPAEEKYRAISLDNKAFKARIAGCLGGVGLLRAIGFAKADDGGEARLVMSADARDEALLQAVKARIDAALATY 582          
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: Hypothetical (protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V754_9STRA)

HSP 1 Score: 219 bits (559), Expect = 4.920e-66
Identity = 148/302 (49.01%), Postives = 184/302 (60.93%), Query Frame = 1
Query:   19 AQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGV-YGGPSAAXXXXXXXXXXXXXXXPSEEQQPAAKVEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEESR----LFMSMEARDEALLANAKEKLEEAIASYVP 909
            A+SLKC +CG  L+DM  AELHASKT H++F EST+A+K L+PEEKA+K+  +KA IA RRAAR EEEKVDHV REK RR MGKE  KTK+E+ A  RK +                 L+A +A+DKAER A  GKL +KLGVDGY PA      YG   A     XXX         ++E  P A      EK++K + +++R    G GG A+KT LAY KN + KPEE KFR+IN++NNAFK RVA   GGVALLKAVGF +E         +  E  D   L   + KLE A A++ P
Sbjct:   53 AKSLKCMDCGALLKDMVVAELHASKTGHANFEESTEAIKPLSPEEKAKKIEELKAKIAARRAAREEEEKVDHVAREKQRRFMGKEMLKTKEELDAQQRKRDAYLXXXXXXXXXXXXXXLRALLARDKAERAANKGKLGSKLGVDGYAPAIDNVTPYGATPAPAPGTXXXTGAEEAKAEAKEDVPPA------EKVDKCIGLISRHRTGGDGGVALKTLLAYTKNIVEKPEEAKFRTINMENNAFKKRVAGIAGGVALLKAVGFVQEVGEDGGNKLVLPEDCDRGFLLETRAKLEAAFAAFQP 348          
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV98_HETAK)

HSP 1 Score: 195 bits (496), Expect = 1.200e-56
Identity = 146/302 (48.34%), Postives = 183/302 (60.60%), Query Frame = 1
Query:   10 GGVAQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAA--AQGVYGGPSAAXXXXXXXXXXXXXXXPSEEQQPAAKVEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKE--ESRLFMSMEARDEALLANAKEKLEEAIASY 903
            G VA+SLKC +CG  LRD+AAAELHA KT H++F ES + VK LTPEEKA K+  +KA +A RRA R E +KVD  +REK RR  GKE AKT++E++           K+EK A +    RL+A I +DK ER A  GKLS+KLG  GY P+   A   YG   A XXXXXX   X       E     A     EE ++KA+  +++    G GG A+KT  AY  NAL   ++ KFRSIN+DNNAF  RVA  IGGVALL+A+GF K+  E+RL +       A L     KLE A+ASY
Sbjct:   49 GQVAKSLKCGDCGALLRDVAAAELHAGKTGHANFEESAEEVKPLTPEEKAAKVEALKAKLAARRAERQEADKVDTKEREKQRRFQGKEMAKTREELERAXXXXXXXAQKREKAAAKAXXDRLRALIEQDKRERAANKGKLSSKLGAGGYNPSMPPASVPYGAAGAXXXXXXXVKEXEESKGAGE-----APALSPEEAIDKAIATVSKYRTGGDGGVALKTLKAYTSNALN--DDPKFRSINMDNNAFMTRVAPFIGGVALLRALGFEKDPAENRLVLPEGGDHRARLQETVAKLEAAMASY 343          
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6A4_9STRA)

HSP 1 Score: 166 bits (419), Expect = 8.490e-45
Identity = 118/301 (39.20%), Postives = 171/301 (56.81%), Query Frame = 1
Query:   16 VAQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGGPSAAXXXXXXXXXXXXXXXPSEEQQPAAKVE-KSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTK-PEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEESRLFMSMEARD--EALLANAKEKLEEAIASYV 906
            VA+S+KC E G   R+   A+ +A +T  + F E+T+  K LT E K +K+A +KA+ A+RRA R   EKV+ + REK RR  G+E+ KTK+++    R  EI R K+EK                    R+ARGG+L+ KLGVDGY P+  Q                        P+    P  K++    E+++KA+  + +   AG GGT +KT  AY++NA+ K  ++EK+R I LDN AFK RV+  +GG+ALLKAVGF K+E+ L +++  RD  +ALL     KLE+A A+YV
Sbjct:   93 VAKSIKCVETGRLFRNAMEAQAYAERTGRTQFEETTEVKKPLTEEGKKQKVAELKALAAQRRAEREGLEKVEDIDREKKRREQGQESIKTKEQLAKAQRLREIDRIKREKXXXXXXXXXXXXXXXXXXXXRRARGGRLAGKLGVDGYNPSIDQN----------DDRRNDACPTTDEPAPAPAPPKKIDLPPPEQVDKAIGTIQKYKTAGDGGTCLKTLGAYLRNAINKGDQDEKYRKIPLDNAAFKKRVSGLVGGIALLKAVGFVKDETHLELTLAVRDSNKALLEETLAKLEKAHAAYV 383          
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: C2H2-type (domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JT89_FISSO)

HSP 1 Score: 164 bits (416), Expect = 2.570e-43
Identity = 124/311 (39.87%), Postives = 167/311 (53.70%), Query Frame = 1
Query:    7 AGGV-AQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQ------GVYGGPSAAXXXXXXXXXXXXXXXPSEEQQPAAKVEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEES-----RLFMSMEARDEALLANAKEKLEEAIASY 903
            AGG+ AQS KC+ECG  L ++A  ELHA+KT HSDF EST +   LT EEKA K+A +K ++  +R  R E EK + V RE  RR MGKE  KT++++ A  RK EIA  KKEK+ F                   A  GKLS+KLG+DGY P A Q      GV+G                      +E+Q   K++ S  K+++ +  ++     G GG  +K   AY+ N    P + KFRSIN++NNA+K RV   +G   LL AVGF++E+       L M+ E     LLA    KLE+AI +Y
Sbjct:  222 AGGLKAQSYKCNECGKILSNLANLELHANKTGHSDFEESTQSAVPLTAEEKANKIAEIKDLLKAKRREREEIEKAEEVTRELQRRNMGKEMHKTREQLDAEQRKREIALRKKEKEDFXXXXXXXXXXXXXXXXXXAANKGKLSSKLGIDGYTPDAIQYDVELGGVHG--------------------TDDEEQKKKKLKASAAKIDEYIAKVSAYRAGGDGGKCLKVLKAYVGNLANNPNDPKFRSINMENNAYKTRVKPFVGAKNLLLAVGFSQEKDSEGIDHLVMNDEPNMN-LLAETTAKLEKAIVAY 511          
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UK40_9STRA)

HSP 1 Score: 164 bits (415), Expect = 7.550e-43
Identity = 120/303 (39.60%), Postives = 163/303 (53.80%), Query Frame = 1
Query:    7 AGGVAQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGGPSAAXXXXXXXXXXXXXXXPSEEQQP--AAKVEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEES--RLFMSMEARDEALLANAKEKLEEAIASY 903
            A GVAQS KC++CG  L  MA  ELHA+KT H+DF EST A+K LT EEKA K+  +K ++  +R+ R  EEK + + REK RR+MGKE +KT+++M   AR                                 A  GKLS+KLGVDGY P A Q  Y  P A                P +EQQ     K   S  K+E  +  ++     G GG  +K  LAYI N +  PEE+KF+ +N++N A+K +V   +G   LL AVGF   ES   L +  +A D +LL++ K+KLE+A+A+Y
Sbjct:  276 AAGVAQSYKCNDCGKVLSSMANLELHANKTGHADFEESTQAIKPLTAEEKAAKMEEIKGLLKAKRSERENEEKEEEIVREKQRRSMGKEMSKTREQMDREARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMANKGKLSSKLGVDGYNPDAIQ--YNVPGAGES-------------PDQEQQKEHVKKPPPSASKIEDYIKKVSAYRAGGDGGKCLKILLAYISNVVNNPEEDKFKRVNMENKAYKGKVKPFLGAKQLLLAVGFVLNESGDTLVLGADA-DLSLLSDTKDKLEKALAAY 562          
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: Hypothetical (protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YJV6_9STRA)

HSP 1 Score: 160 bits (406), Expect = 5.650e-42
Identity = 121/301 (40.20%), Postives = 152/301 (50.50%), Query Frame = 1
Query:    7 AGGVAQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGGPSAAXXXXXXXXXXXXXXXPSEEQQPAAKVEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEESR--LFMSMEARDEALLANAKEKLEEAIASY 903
            AGGVAQS KC+ECG  L +MA  ELHA+KT HSDF EST +VK LT EEKA K+  +K ++  +RA R E EK D  +REK RR MGKE AKTK++M    RK E                                 GKLSTKLGVDGY P   Q                         S EQ+ A K +    K++  +  ++     G GG  +K   AY+ N    P+E KF++IN+DN AFK +V   IG   LL AVGF + E +    +  E  D  LLA  K K+E AI +Y
Sbjct:  212 AGGVAQSYKCNECGKILSNMANLELHANKTGHSDFEESTQSVKPLTAEEKAAKILEIKELLKAKRAEREEGEKEDAKEREKQRRFMGKEMAKTKEQMDIEQRKREALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKGKLSTKLGVDGYNPDGVQ---------------YDVDNEESGESGEQKQAKKPKVDAAKIDDYLSKVSAYRAGGDGGKCLKILKAYVGNVADNPDESKFKTINMDNKAFKTKVKPFIGAKQLLLAVGFQQPEGQPGSLVLAEPADYELLAATKAKIEAAIVAY 497          
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D704_9STRA)

HSP 1 Score: 156 bits (395), Expect = 6.630e-40
Identity = 115/266 (43.23%), Postives = 149/266 (56.02%), Query Frame = 1
Query:  145 PEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGGPSAAXXXXXXXXXXXXXXXPSEEQQPAA----KVEK-------SEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKE--ESRLFMSMEARDEALLANAKEKLEEAIASY 903
            P +K   L  +KA IA RRA R E EK + V+REK RR  GK   KT +E+Q + R+ E A  +KE          L+ EIAKDKAER +RGG L  +L  DGY P+  QG YG   A+                + E+ P A    K E+       S E +EKA+ ++ RQ +A  GG A+KT +AY+KN      EEKFRSINL+N AFK+RVA  +GG +LLKA+GF K+  E R F++ E  D A L   K KLE A+  Y
Sbjct:  315 PPKKKITLEELKARIAARRAERNEMEKKEEVQREKLRRESGKSIIKTNEELQRLQRQREFAAMRKEXXXXXXXXXXLRMEIAKDKAERASRGGYLPGRLDADGYNPSGLQGAYG---ASVAGGEDTSEGGVGTGTTVEKVPRAVGSGKGEEAMAPGTTSMESVEKAIGLMKRQRIADGGGMALKTLIAYVKNIAGTAGEEKFRSINLENKAFKSRVAPVLGGSSLLKAIGFTKDDVEGRWFLAPEHVDVAFLGEVKGKLEAALIEY 577          
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0TQ21_9STRA)

HSP 1 Score: 150 bits (379), Expect = 4.280e-39
Identity = 123/296 (41.55%), Postives = 172/296 (58.11%), Query Frame = 1
Query:   16 VAQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGGPSAAXXXXXXXXXXXXXXXPSEEQQPAAKVEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEESRLFMSMEARDEALLANAKEKLEEAIASY 903
            VAQS  C+ECG  L +MA  ELHA+KT HSDF+ESTD VK+LT EEKA K+                                      T++EM+   RK+ +A+ K+EK+A+  ER R++AE+AKDKAER A  GKL++KL ++GYKP A Q  Y      XXXXXXXXXXXXXXX +E++    K      K+++ +  ++     G G   +K  LAYI+N +  P+E K+++IN +N A+K RV   IG   LL AVGF  EE+++ +  ++ D  +L   K+KLE A  +Y
Sbjct:   76 VAQSYNCNECGKVLSNMANLELHANKTGHSDFAESTDQVKSLTKEEKAAKILEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTREEMERNERKHAVAKKKREKEAYRNERERIRAELAKDKAERIANKGKLTSKLSINGYKPDAIQ--YNTNLTTXXXXXXXXXXXXXXXTAEQENTPKKKIPDVAKIDEYIQKVSSYRAGGDGAKCLKILLAYIRNVVDHPDESKYKTINTENKAYKLRVRPFIGAKTLLLAVGFQLEENKMTLGPDS-DIHILKQTKDKLEAAYNAY 368          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
PUB1.050e-16592.83domain, zinc finger protein Thioredoxin n=1 Tax=Ec... [more]
PUB5.510e-7856.68domain, zinc finger protein thioredoxin n=1 Tax=Tr... [more]
Hypothetical4.920e-6649.01protein n=2 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Hypothetical1.200e-5648.34protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical8.490e-4539.20protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
C2H2-type2.570e-4339.87domain-containing protein n=2 Tax=Fistulifera sola... [more]
Hypothetical7.550e-4339.60protein n=1 Tax=Attheya septentrionalis TaxID=4202... [more]
Hypothetical5.650e-4240.20protein n=1 Tax=Amphiprora paludosa TaxID=265537 R... [more]
Uncharacterized6.630e-4043.23protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
Hypothetical4.280e-3941.55protein n=1 Tax=Eucampia antarctica TaxID=49252 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7953contigE_fasciculatus_S2_contig7953:305..5231 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score488.8
Seed ortholog evalue1.9e-135
Seed eggNOG ortholog2880.D7G613
Preferred nameUBXN1
Model size924
KEGG koko:K01456,ko:K03671
KEGG Pathwayko04141,ko04621,ko05418,map04141,map04621,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006457,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010466,GO:0010498,GO:0010605,GO:0012505,GO:0016020,GO:0019222,GO:0019538,GO:0019899,GO:0019941,GO:0030162,GO:0030163,GO:0030425,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031593,GO:0031625,GO:0031984,GO:0032182,GO:0032268,GO:0032269,GO:0032434,GO:0032435,GO:0032991,GO:0034098,GO:0036435,GO:0036477,GO:0042175,GO:0042176,GO:0042177,GO:0042995,GO:0043005,GO:0043025,GO:0043086,GO:0043130,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044297,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0045861,GO:0048471,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0051117,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051336,GO:0051346,GO:0051603,GO:0052547,GO:0060255,GO:0061136,GO:0065007,GO:0065009,GO:0071704,GO:0071796,GO:0080090,GO:0080134,GO:0080135,GO:0090085,GO:0090086,GO:0097447,GO:0097458,GO:0098796,GO:0098827,GO:0120025,GO:0120038,GO:0140030,GO:1901564,GO:1901565,GO:1901575,GO:1901799,GO:1903050,GO:1903051,GO:1903093,GO:1903094,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1903573,GO:1904292,GO:1904293,GO:1905897,GO:2000058,GO:2000059,GO:2000152,GO:2000157
Exons7
EggNOG free text desc.K6-linked polyubiquitin modification-dependent protein binding
EggNOG OGsKOG0908@1,KOG0908@2759,KOG2689@1,KOG2689@2759
EC3.5.1.52
Cds size924
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7953.16111.1prot_E_fasciculatus_S2_contig7953.16111.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7953 305..5231 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842455.6791081-CDS-E_fasciculatus_S2_contig7953:304..3971696842455.6791081-CDS-E_fasciculatus_S2_contig7953:304..397Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7953 305..397 +
1696842455.6987002-CDS-E_fasciculatus_S2_contig7953:1407..15541696842455.6987002-CDS-E_fasciculatus_S2_contig7953:1407..1554Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7953 1408..1554 +
1696842455.7086332-CDS-E_fasciculatus_S2_contig7953:2467..25661696842455.7086332-CDS-E_fasciculatus_S2_contig7953:2467..2566Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7953 2468..2566 +
1696842455.7300093-CDS-E_fasciculatus_S2_contig7953:3395..36201696842455.7300093-CDS-E_fasciculatus_S2_contig7953:3395..3620Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7953 3396..3620 +
1696842455.7507358-CDS-E_fasciculatus_S2_contig7953:4255..43961696842455.7507358-CDS-E_fasciculatus_S2_contig7953:4255..4396Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7953 4256..4396 +
1696842455.7614138-CDS-E_fasciculatus_S2_contig7953:4720..48551696842455.7614138-CDS-E_fasciculatus_S2_contig7953:4720..4855Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7953 4721..4855 +
1696842455.7712314-CDS-E_fasciculatus_S2_contig7953:5147..52311696842455.7712314-CDS-E_fasciculatus_S2_contig7953:5147..5231Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7953 5148..5231 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7953.16111.1

>prot_E_fasciculatus_S2_contig7953.16111.1 ID=prot_E_fasciculatus_S2_contig7953.16111.1|Name=mRNA_E_fasciculatus_S2_contig7953.16111.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=308bp
AVAGGVAQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPE
EKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQ
AIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVD
GYKPAAAQGVYGGPSAAGGAGAGGAAAADAAGPSEEQQPAAKVEKSEEKM
EKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFK
NRVATCIGGVALLKAVGFAKEESRLFMSMEARDEALLANAKEKLEEAIAS
YVPTKAS*
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mRNA from alignment at E_fasciculatus_S2_contig7953:305..5231+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7953.16111.1 ID=mRNA_E_fasciculatus_S2_contig7953.16111.1|Name=mRNA_E_fasciculatus_S2_contig7953.16111.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4927bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7953:305..5231+ (Ectocarpus fasciculatus EfasUO2)
GCTGTAGCAGGTGGGGTGGCCCAGAGCTTAAAGTGCGACGAGTGCGGTGT GACCCTCAGGGACATGGCGGCGGCGGAGCTGCACGCCAGCAAGGTAACAC ACACACCTCACACGTGTTTGTTTTCGTGTCTTCGGTGCTGCAGGCATTCT CCCACCACCCCCAAGGAATCTCCTTTAGACTTTTTGGGTGTCTTTTCACC CACGTATCTAGCCGTCACGCTTGGTGAAATGCCTTTCGGTTTGTATTTTT TCAAGTGTCTCTCCGTCACGCATGTAGCCTTTCTTACTCCAGGCGAAACA AGCCCCCGTTCTCACGCTTTCTTCTTATCTGGTAAGCGCCGAAACTGCGA TCACGGGGAGTGCTTCCGCAACAGTAGTGCCCGAATGCTAGGCCCCAGGA CACTAAAATGTTCCCGGGTGTTGTCGGCATGTACAACCTGCTGATATCCT AATAGTAGAATGTCGAGGAAAGCACGTACGGAAGAATGTTTATGTGGGTG TCCTCTCGATCGACCGCTGTGGCACGACACCCCCGGTAGTTTTTCGCCGT CTGTTGTGGATTTTTGTGACCGAACCGCTCCGTGCTCTTCGCCATGTTCC AGTTATTGCCACAAGAAAAAACAAATGATATCCCCGGGGGTGCGCTCAAG TTCTCACGCCTTTTTTGTGGGAGAGGTTGTCGGCGAACACGATGGGGTCG GACCCGCGTCTTTTTCCTGTCATCGGTACATAAGTAGCGTCTCCTCTCGA GCACAGGCGCAGCCGCAACATTTTCACCACAGGAATTCACTGCAGCTGCC CTGAACCTCGGCGGCCACTGGTAGAGGCCCTATTCGAGGACATGCTTTAG ACTCGTCAAATATTGTTTCCTCCGAGATTCGTGGTTACGTGCAGCGTGCG AACAACCTGTTTTGGTGTTGTCCGCACATGCAGTTACCGTGTCCGTCGCC CGTCGTTTGGTTTTTACCAATCCGTATCCTTGCACCACGAATCGTTTCAT TGTCCGTCATAGGTTTTTTCTTTGACGTCATTCGCGCGCGTTTTTCTTTT CGCCTTTTTTTTTTTTCTCCTTGCGTTTGTGATGCTTGCCCTGCCCCCGT CAGACTTCTCACAGCGACTTCAGCGAGAGCACCGATGCGGTGAAGGCCCT GACGCCCGAGGAAAAGGCGGAAAAGCTGGCGAGGATGAAGGCGATCATCG CCGAGAGGAGGGCAGCCAGAGGGGAGGAGGAGAAGGTCGACCACGTCAAG GTGTGTGTGTGTGTGTGTGTCGTGTGCGTGCGCCCGTGTTTGTTTCGAAT AAGCATCACCTCGCGCTGCGCTGTGTGCATGTGTTATTTACTGATTTGCA CCGACGCGGTAACCGGCTGACCAATAAAAAATTAAGTGTGTGTGTGTGTG TGTTTTTTTTGTCATGTGTACTTGTCACGGCATTTTTTTTTAACAATGGT CTTTTGCACCTTTCCGTGCGATTTCTGGACACACCGGCCGGGGTCACACG GGAGGAAGAAATGCCACACGATGCAAAAGATTAAAGTGTGTGTGCTTGTG TTTATTTCTGGTGTCACAATTCACGGCAGGGCTCGTATTTGTTTTCACCA AGAGAAGCAGGGTGTGTCGGTGGCTGCAATCAGCGGTTCGTCCATGCGTT TCGAATGCGTGCCAAAGATGAGAGAGGGAGGTATTTTACACCGAATGCAA CAGCCCGCTTGAAGAGTAAAAAAATGCGCCTGACAAGTGTGTGACTTTTG GTCACAATCGATTCATTTGTGCTCTGCCATCGCAGGAGCTACTGTTGGCG CAAAACGTGGTCATATTGAAATAGGTGGAAGAAGAGCCCCTGTTCCTCTC GCGATTCTGCCTTCACTTTGTCGCTCGAGAACCTATGTCACCGTTCGTTT TCCTCCAGTGTTGAGAGAGAGAGAGAGAGAGAGAGAGAGGGTGCAAGCTG CGAACTTCTGAAGCTGTTTTGTGCCCAACCCTATCGCTACTACTGTACTG TACCCCTTCTTCTGCCTATCTTCGGTCCCCTTGTAGCAAGCGTTTTTCTC ATCTTGTCTTCTCTCTCTCTTCCTATCCGTCGCACGCACGTACCCTCCTC TCGTTGTCTTGTTTCCTACCCGTGCGATGCGTGTATTCCGCGTGTACCTT TTTTGGCGCACAGCGAGAGAAGGCGAGGCGTACGATGGGCAAGGAGGCCG CCAAGACGAAGGACGAGATGCAGGCTATCGCGCGCAAGAACGAGATCGCC CGTGCAAAGAAGGTACAGTAGTTCTGGTTGCGGTGTCGAGCGTTTGAGAA CACCGGGACACACGCCTTTTACGCGTATGCATGCTTTCGGCCAATAGACG ACGTGTCCTCACACAGGCGGCAGGGAAGAAACCAGTAGCAGGGTTGTTGT ATTGCTTTCAGGGAATATGTTGGATATAACATGCTATCGGGGAAGTTGGG TTGGGGCTAGGGTTAAGGAATAGGCCCCTCCCTGTTCTTTTTCGTTGTAG TTCTTAATTTTCCGCGAAGGCTGTCCGAAGAAGCACGATAGGTCTTGGCC ATCCACGCCCGCAGAGGACTACTGAGAGCACCTGTAGTGGGGGGGGGCGT GGGAAGCTTTTGCTCCGCCTTTGCAGTGCCTCGTGCCGTAGCAGAGCCCT CAGCAAGTTTGACCTCGATCGCCGTGACCGTTGTTGACGTCGGGAGCAAG CAGGCGCTTCAAGCGAGAGAGCTCTAAGTAGTGGGGGGGGGGAGAAACGG GGAGCACGCGCCCACTGCCAACCCGTGTACCAATCGCAACTGTTTCTTCG CCCAGAAGCGAACCCCGGTCAGATTTTATAGTTGCAGTTTTCCTCCCGGT CGTTCTATAAGAGGTGAAGAGTTACGTTCGAGCTGGAGAGCGAGTGCCAA CACCACACCGATCTCCTTTGCATACGTTTTCTTGAGTCATCTTCTGTTTA ACCAGTAGAAACATTGCGGTCCCTCTGGTAAGCTAAGCACGCGCGCTCGG AACCCGCGGCTTACTACTGTGTTTGCATTGCCACATGACTGTTGCTCGCC ATTGCTCCCTCTCCACCCCCACCGCTCGATCAACCAAACAGGAGAAGCAG GCGTTCGAGCAAGAGCGAGCACGCCTGAAGGCGGAGATCGCCAAGGACAA GGCCGAGCGCAAGGCGAGGGGCGGGAAGCTCTCCACCAAGCTTGGCGTGG ACGGCTACAAGCCCGCCGCTGCGCAGGGGGTGTACGGCGGCCCTAGCGCG GCGGGAGGGGCAGGGGCCGGGGGCGCGGCAGCAGCTGATGCCGCAGGGCC CTCGGAGGAGCAACAGGTGGGCCATACAGCGTGTGCTGCTGTCTGTGTCT GTTTGTCAGGCGAGGCCTTGGTGTTGGGGGTGCCCCCCCTCCCCCTCTTT CCCTTCCCCCCTCGGAGTGTTTCGCCGCGTGAAGAATATCGACCGGCCCA TGTTTTGGGTAACATACATTCCGTTCCGCCTGTTTTACGTGAGACACGCG ATCGCGACACGGGAAAGCGTTGCATGTGCTGGTTGTTCATCGCTGTTGGT GTGCAGCCGCTCAAAGAACCGCCGGCATTATTGAGGGACACAGACGTGAA TCCCAGCCCCCCCTACCCCCAGAGTAAAGCCGCCAAGGGCCGGCACAACC GGAAGTGCCCCTACCTAGGTTCGTGCGTTGTGCAGATTAGTGTATGGCGT TTTGTTACCCCCACGCATGGGGCCATGGCTCTTTGCGCCGCCTGCCCGAT GTTACTCTGTGCTTTCCCAAGCGGGGACTAAAAGAGACAAACCTTGACGT AGCTGATTGCCTGGGCTGTGTTGGGTGTCATTGGCGTAACACGCCTTTTC TTGGACGTTGGGTATGTGTCCTTACACACACGTGGAACTGCAGGCTCGTA ACGCTAGACACTCCAACTGACCTATTTCCCACTGATGTCGCGGTGCCACA GCCGGCTGCAAAGGTGGAGAAGTCGGAGGAAAAGATGGAGAAGGCGGTTG ACATGCTGGCGCGCCAGACGGTGGCGGGCCTCGGGGGCACGGCCATGAAG ACTTGCCTGGCGTACATCAAGAACGCGCTAACTAAACCGGAGGTATGACC CGTTCGACGAGTACGTACTGTAGCGGCACGAGCTTGCTTGGCTGCTGTCG CACGCGATCCCAGGGCCACATGGAGCTGAGTGTTCTGTGTGGGAGGCGTT GTTGCCGTAGATTCTCACTCGCGACTTGAGTGAAATCAACCTGAGAAGTT AGCAATCGGGCGCTCCTTGTGTACGCTACATACCCTCGATTTGGCAGAGG ACTTCTTGCATGTGGTCGATCCACTGTTGCGTGTCTTCTGTAGTCTCCAC TCCACCCACACTCAAAATTGCTGCATATATATTTTTTTTCCTGCGTTCGT TCCGTACCATACGTAGGAGGAGAAGTTCCGCTCCATCAACCTGGACAACA ACGCCTTCAAGAACCGCGTGGCCACCTGCATCGGCGGCGTGGCCCTCCTC AAGGCGGTCGGCTTCGCCAAGGAGGAGAGCCGCCTCTTCATGAGCATGGA GGTCAGTCAAGTCAAGGTTTTGCGTCATGGGCGTGTTGTGGTTGCACCCG CCCGCTGCTGCCGTGTTCTAGGCTGGACCGTTTCTGTTCGGCGAATCTGC TATGGTTTTTGTGCGCAAGAGTAATGTTCAACGTCCGAGGGCATTTGGTG ATGTTTTATGTTTTCGTTGTGGCTCAGGGCCCGAAAGCCGCTATACTTTT AACAAACGATTGCCCCCTGCCGGCCTTCCCTCTGCCCCCTTGGCATTTTG CTCTGGATCGCTTTTTTTCTGACCTTGTGGGTTGCTGCTGCAGGCACGCG ACGAGGCTCTTCTGGCGAATGCCAAGGAAAAGCTGGAGGAGGCTATCGCC TCCTACGTGCCCACCAAAGCCAGCTAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7953:305..5231+

>mRNA_E_fasciculatus_S2_contig7953.16111.1 ID=mRNA_E_fasciculatus_S2_contig7953.16111.1|Name=mRNA_E_fasciculatus_S2_contig7953.16111.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=924bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7953:305..5231+ (Ectocarpus fasciculatus EfasUO2)
GCTGTAGCAGGTGGGGTGGCCCAGAGCTTAAAGTGCGACGAGTGCGGTGT
GACCCTCAGGGACATGGCGGCGGCGGAGCTGCACGCCAGCAAGACTTCTC
ACAGCGACTTCAGCGAGAGCACCGATGCGGTGAAGGCCCTGACGCCCGAG
GAAAAGGCGGAAAAGCTGGCGAGGATGAAGGCGATCATCGCCGAGAGGAG
GGCAGCCAGAGGGGAGGAGGAGAAGGTCGACCACGTCAAGCGAGAGAAGG
CGAGGCGTACGATGGGCAAGGAGGCCGCCAAGACGAAGGACGAGATGCAG
GCTATCGCGCGCAAGAACGAGATCGCCCGTGCAAAGAAGGAGAAGCAGGC
GTTCGAGCAAGAGCGAGCACGCCTGAAGGCGGAGATCGCCAAGGACAAGG
CCGAGCGCAAGGCGAGGGGCGGGAAGCTCTCCACCAAGCTTGGCGTGGAC
GGCTACAAGCCCGCCGCTGCGCAGGGGGTGTACGGCGGCCCTAGCGCGGC
GGGAGGGGCAGGGGCCGGGGGCGCGGCAGCAGCTGATGCCGCAGGGCCCT
CGGAGGAGCAACAGCCGGCTGCAAAGGTGGAGAAGTCGGAGGAAAAGATG
GAGAAGGCGGTTGACATGCTGGCGCGCCAGACGGTGGCGGGCCTCGGGGG
CACGGCCATGAAGACTTGCCTGGCGTACATCAAGAACGCGCTAACTAAAC
CGGAGGAGGAGAAGTTCCGCTCCATCAACCTGGACAACAACGCCTTCAAG
AACCGCGTGGCCACCTGCATCGGCGGCGTGGCCCTCCTCAAGGCGGTCGG
CTTCGCCAAGGAGGAGAGCCGCCTCTTCATGAGCATGGAGGCACGCGACG
AGGCTCTTCTGGCGAATGCCAAGGAAAAGCTGGAGGAGGCTATCGCCTCC
TACGTGCCCACCAAAGCCAGCTAG
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