mRNA_E_fasciculatus_S2_contig794.16097.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: Tyrosine (Transport protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA9_ECTSI) HSP 1 Score: 442 bits (1136), Expect = 4.810e-153 Identity = 235/248 (94.76%), Postives = 240/248 (96.77%), Query Frame = 1
Query: 1 MDRLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGITALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAIIG 744
MDRLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGL+MMW YMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGI ALPEW PVAFCLALGGLVLFF+EEFVAS NSVLVGVVLLSFFGLV VGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLE D+D +RKA+IG
Sbjct: 1 MDRLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLVMMWAYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGIAALPEWASPVAFCLALGGLVLFFTEEFVASVNSVLVGVVLLSFFGLVGVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEGDVDKIRKAVIG 248
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: Tryptophan/tyrosine (permease family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVI2_9STRA) HSP 1 Score: 237 bits (605), Expect = 1.260e-70 Identity = 136/242 (56.20%), Postives = 173/242 (71.49%), Query Frame = 1
Query: 1 MDRLFSTLE--PCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGITALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMD 720
++RLFS +E P DV FKRK T+LL A +L+ GT VGAG+LALPAAT+QAGL+PS++ L+ +WVYMV T LLIAEVNVN+IC +G PG+GL+ALAE+ LGK GAR GL+YVFIHY+LLVAYMAQGGELLA + G G W GPVAF GG + SE+ + N+ LV VVL SF L+V GG++ YLA DWS + PV+ +A+V+HNV+PV+TTQLE D++
Sbjct: 24 VERLFSNIERGPLDVR-FKRKSTSLLGATALVGGTTVGAGVLALPAATIQAGLVPSSLVLVGVWVYMVCTGLLIAEVNVNLICREGQPGLGLLALAERTLGKIGARAAGLLYVFIHYALLVAYMAQGGELLARFV--LGGDPGDGAA----WVGPVAFATLWGGGMALGSEKLIEGVNNALVAVVLASFALLLVSAGGGIKHEYLAHNDWSTVLQAAPVMLVALVYHNVVPVITTQLEGDVN 258
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NZW3_HETAK) HSP 1 Score: 229 bits (583), Expect = 3.380e-69 Identity = 119/247 (48.18%), Postives = 170/247 (68.83%), Query Frame = 1
Query: 1 MDRLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGITALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAII 741
++RLFS LE + GF+RK ++L A +L+AGT VGAG+LALPAAT G++PS++ L+ MW YMV + LL+AE N+N++ +G +GL+A+AE+ LG+ G R G Y+FIHY LLVAY+AQGG LLA+ +LPE+ GPV FC GGL+ F SE + S N+V V +V+ SF GL+V+ + G++++ L +DWS P VPV F+A+VFHNV+PV+ TQLE D +R+A++
Sbjct: 42 VERLFSNLEESESGGFQRKEGSVLGATALVAGTTVGAGVLALPAATASTGVIPSSIILLGMWAYMVASGLLLAETNLNLVVREGRVNLGLLAVAERTLGRAGGRAAGAAYLFIHYCLLVAYLAQGGALLADLLLP------GQQQSLPEYLGPVGFCAIFGGLLAFGSEALIESVNNVFVTIVITSFLGLLVLATPGIEISRLFVEDWSAAPGVVPVTFVALVFHNVVPVIVTQLEADRAKIRQAVL 282
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4P3_9STRA) HSP 1 Score: 218 bits (556), Expect = 2.150e-64 Identity = 120/247 (48.58%), Postives = 165/247 (66.80%), Query Frame = 1
Query: 1 MDRLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGITALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAII 741
+DRLFS ++ +R ++L+A SL+AGT VGAGILALPAAT+ +G++PS L+ MWVYMV + LLIAEV++ +G G+GL+ +AE+ LG+ G+RF G VYV +HY LLVAYMAQGG + A + + LP W GPV F A GGL+ SE+ V S N+ V VVLLSF GL+ V GV+ L +QDWS+ +PV+F+A+VFHN++PV+ TQLE ++ VR+AI+
Sbjct: 113 VDRLFSNIQRTKQGTVERDEGSVLAATSLVAGTCVGAGILALPAATVSSGVIPSTTLLLGMWVYMVASGLLIAEVSLTRTLREGQTGLGLLVMAEKTLGRAGSRFAGTVYVGLHYCLLVAYMAQGGGIAAAGIRDLTSL------PLPSWAGPVGFATAFGGLLALGSEKLVESVNNAFVAVVLLSFVGLLTVAVPGVRAERLLDQDWSQAYEMIPVMFVALVFHNIVPVIATQLEGNVSKVRQAIL 353
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: tyrosine (transporter n=1 Tax=Anabaena sphaerica TaxID=212446 RepID=UPI00168599F2) HSP 1 Score: 202 bits (515), Expect = 2.210e-59 Identity = 107/246 (43.50%), Postives = 165/246 (67.07%), Query Frame = 1
Query: 7 RLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGI-TALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAII 741
RLFS LE D + +P ++L + +LIAGT +GAGILALPA TL +G+LPS + +I++W+Y + + LLIAEV++NV+ ++G P +G +A+ E+ LGK GAR G Y+F+HY+LLVAY+++GG++L +F + +G+ LP W G F GG++ E F+ N V +V++SF GL+++GSG V+ Q+W+ + S V V+ +A+ +HNV+PVV TQLE D+ +RK+II
Sbjct: 14 RLFSHLE-FDGNKLNHQPGSVLGSTALIAGTTIGAGILALPAVTLPSGILPSTIAIIVVWLYTLFSGLLIAEVSLNVMGAEGIPSIGFLAIVEKTLGKVGARIAGATYLFMHYALLVAYISKGGDILVSTFAKI-----AGLDNILPNWVGTTTFTFLFGGILYLGKERFIQKLNGAFVAIVIISFIGLLLLGSGQVKSEQFLFQNWNAVGSAVSVICVALFYHNVVPVVVTQLEGDLPKIRKSII 253
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: Tyrosine (transporter n=1 Tax=Anabaena sp. TaxID=1167 RepID=UPI00182C3A7A) HSP 1 Score: 201 bits (511), Expect = 7.180e-59 Identity = 114/246 (46.34%), Postives = 165/246 (67.07%), Query Frame = 1
Query: 7 RLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGITA-LPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAII 741
RLFS LE + S +P ++L + +L+AGT VGAGILALPA TL +G++PS V LI++W+Y + + LLIAEV++N + S+G VGL+A+ E LGK GAR G Y+F+HY+LLVAY+AQGGE+L + V SGI+ P W G F L GG++ + E+F+ NS V +VL++F GL+++G+G ++ QDWS L S V V+ +A+ +HN++PVV TQLE D +R++II
Sbjct: 9 RLFSRLE-LNGSKLTHQPGSVLGSTALVAGTTVGAGILALPAVTLPSGIVPSTVLLIVVWLYALVSGLLIAEVSLNTMRSEGRLSVGLLAMVENTLGKLGARIAGSAYLFLHYALLVAYVAQGGEILISALTKV-----SGISHHWPGWVGTTTFTLVFGGIMYWGREQFIEKLNSAFVAIVLVAFLGLLLLGTGQIKSVQFLFQDWSALGSAVSVMLVALFYHNIVPVVVTQLEGDSRKIRQSII 248
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: Aromatic (amino acid permease n=4 Tax=Nostocales TaxID=1161 RepID=A0A1Z4INN3_9CYAN) HSP 1 Score: 201 bits (512), Expect = 7.310e-59 Identity = 114/244 (46.72%), Postives = 158/244 (64.75%), Query Frame = 1
Query: 7 RLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGITALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAI 738
RLFS LE S +P ++L + +LIAGT VGAGILALPA TL +G++PS V LI +W+Y + + LLIAEV +N + G P +GL+A+ E+ LGK GARF G Y+F+HY+LLVAY+AQGGE+L + V LP W G AF L GG++ E FV NS V +VL SF GL+++G+ ++ + + Q+WS LP V V+F+A+ +HNV+P V TQLE D +R++I
Sbjct: 14 RLFSNLELYG-SKLSHQPGSILGSTALIAGTTVGAGILALPAVTLPSGVVPSTVLLIAVWLYALVSGLLIAEVTLNTMRLVGRPSLGLLAMIERTLGKLGARFAGGAYLFLHYALLVAYVAQGGEILVSAVEKVLGVQ----NVLPAWVGTTAFTLLFGGIMYLGRERFVEKLNSAFVAIVLASFLGLLLLGTTQLKTSSFSFQNWSALPGAVSVMFVALFYHNVVPTVVTQLEGDAHKIRQSI 252
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: Aromatic (amino acid permease n=3 Tax=unclassified Nostoc TaxID=2593658 RepID=A0A1Z4IEU0_9NOSO) HSP 1 Score: 201 bits (510), Expect = 8.950e-59 Identity = 114/246 (46.34%), Postives = 164/246 (66.67%), Query Frame = 1
Query: 7 RLFSTLEPCDVSGFK--RKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGITALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAI 738
RLFS LE + G K +P ++L + +LIAGT VGAGILALPA T+ +G++PS V LI +W+Y + + LLIAEV++N I +G VGL+A+ ++ LGK GAR G Y+F+HY+LLVAY+ QGG++L +F V+ GI+A+P W G F L G ++ F E+F+ NS V +V+ SFFGL+++G+G V+ QDWS + S V V+ +A+ +HNV+PVV TQLE D +R +I
Sbjct: 8 RLFSRLE---IEGNKLTHQPGSVLGSTALIAGTTVGAGILALPAVTMPSGIVPSTVLLIAIWLYALISGLLIAEVSLNSIRIEGRLSVGLLAMVKRTLGKLGARIAGGAYLFLHYALLVAYVTQGGDILISAFAQVW-----GISAMPTWLGGTVFTLLFGSILYFGREKFIEKLNSAFVAIVITSFFGLLLLGAGQVKSGQFLVQDWSAVGSAVSVMLVALFYHNVVPVVVTQLEGDSRKIRHSI 245
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: Tyrosine (transporter n=4 Tax=Nostocales TaxID=1161 RepID=A0A8J7DHV4_9CYAN) HSP 1 Score: 199 bits (507), Expect = 3.770e-58 Identity = 111/244 (45.49%), Postives = 158/244 (64.75%), Query Frame = 1
Query: 7 RLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGITALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAI 738
RLFS LE D + +P ++L + +LIAGT VGAGILALPA TL +G+LPS LI +W+Y + + LLIAEV +N + +G P VGL+A+ ++ LGK GAR G Y+F+HY+LLVAY+ QGGE+L + ++ LP W G F L GG++ E+F+ NS VG+V++SF GL+++G G V+ Q+WS L S V V+ +A+ +HNV+PVV TQLE D+ +R +I
Sbjct: 14 RLFSHLE-FDGNKLNHQPGSVLGSTALIAGTTVGAGILALPAVTLPSGILPSTALLIAVWLYALVSGLLIAEVTLNAMHLEGRPSVGLLAIVQKTLGKQGARIAGGAYLFMHYALLVAYITQGGEILVSAIAKIWGVQ----NVLPTWVGTTTFTLLFGGIMYVGREKFIEKLNSAFVGIVIISFLGLLLLGGGQVKSAQFLFQNWSALGSAVSVMCVALFYHNVVPVVVTQLEGDVRKIRNSI 252
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: tyrosine (transporter n=1 Tax=Alkalinema sp. FACHB-956 TaxID=2692768 RepID=UPI001688B5B2) HSP 1 Score: 198 bits (504), Expect = 1.240e-57 Identity = 107/253 (42.29%), Postives = 165/253 (65.22%), Query Frame = 1
Query: 7 RLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSV--------FATAGSGITALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAII 741
RLFS LE + +P ++L A +L+AGT +GAGILALP+ TL AG++PS + L++ W+Y V + LLIAEVN++++ G P +G +++ E LGKGG+R G Y+F+HY+LLVAY+AQGGE+L + + AT + + A+P W G F GG++ + + + FN+ LV +V++SF GL+++ G VQ+ QDW+ LP + V+ +A+ FHNVIPV+TTQLE D+ +++AI+
Sbjct: 5 RLFSNLELTE-GRLHHQPGSVLGATALVAGTTIGAGILALPSVTLPAGVIPSTIALLLAWLYAVVSGLLIAEVNLHMMRQSGVPTLGFLSMIELTLGKGGSRLAGAAYLFLHYALLVAYIAQGGEILLSAIAKLSAFIPIPPVATMATHLAAIP-WVGTALFTGLFGGILYWGRSQLIERFNNGLVAIVVMSFLGLLILAIGQVQIEQAIFQDWTALPPAISVMLVALFFHNVIPVITTQLEGDVQKIKRAIV 255 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig794.16097.1 >prot_E_fasciculatus_S2_contig794.16097.1 ID=prot_E_fasciculatus_S2_contig794.16097.1|Name=mRNA_E_fasciculatus_S2_contig794.16097.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=248bp MDRLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGback to top mRNA from alignment at E_fasciculatus_S2_contig794:16..3820- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig794.16097.1 ID=mRNA_E_fasciculatus_S2_contig794.16097.1|Name=mRNA_E_fasciculatus_S2_contig794.16097.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3805bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig794:16..3820- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig794:16..3820- >mRNA_E_fasciculatus_S2_contig794.16097.1 ID=mRNA_E_fasciculatus_S2_contig794.16097.1|Name=mRNA_E_fasciculatus_S2_contig794.16097.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=744bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig794:16..3820- (Ectocarpus fasciculatus EfasUO2)back to top |