mRNA_E_fasciculatus_S2_contig7938.16096.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP24_ECTSI) HSP 1 Score: 397 bits (1019), Expect = 8.420e-133 Identity = 215/245 (87.76%), Postives = 227/245 (92.65%), Query Frame = 1
Query: 1 MAPIA-VMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGAMRAQSSYPSSSSSSSNSCRQKTLRRHTHANLRCTATTXXXEGGTAAXXXTAAMSADQHALDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQE 732
MAP+A VMLSAAAVAVPMAGAFVVNPTTRSAFTRQS GAMRA+S YP+S+S NSCRQ+TLRRHTHANLRCTAT+ EG TAA TAA++ADQHALDPTLH+E+ AAE+DHFRD AYPQNKARWKKNTKQIATLGPASCT EQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIE KYKHPICILADLQGPKLRVGTFEHDTVNLV+GQMFRFDMDDEPGDAARVKLPHKEIIDTLQE
Sbjct: 1 MAPVAAVMLSAAAVAVPMAGAFVVNPTTRSAFTRQSLGAMRARSPYPTSTS---NSCRQQTLRRHTHANLRCTATSTA-EGSTAA---TAAVAADQHALDPTLHEED--AAEVDHFRDIAYPQNKARWKKNTKQIATLGPASCTEEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIEAKYKHPICILADLQGPKLRVGTFEHDTVNLVNGQMFRFDMDDEPGDAARVKLPHKEIIDTLQE 236
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=3 Tax=Phaeophyceae TaxID=2870 RepID=A0A097IU54_9PHAE) HSP 1 Score: 360 bits (925), Expect = 9.980e-119 Identity = 193/245 (78.78%), Postives = 209/245 (85.31%), Query Frame = 1
Query: 1 MAPIAVMLSAAAV-AVPMAGAFVVNPTTRSAFTRQSWGAMRAQSSYPSSSSSSSNSCRQKTLRRHTHAN-LRCTATTXXXEGGTAAXXXTAAMSADQHALDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQ 729
MAP+++MLSAAAV AVPMAGAFVVNP+ SAFTRQ++GAM+A+SS+P S+SSS S RQ+TLRRHTH N LRCTAT DQHALDPTLHDEE G +DHFRDFAYPQN ARWKKNTKQIATLGPASCT EQIEALFLAGVDVFRLNFSHG HD+KA+LVSIIR IETKYKHPIC+LADLQGPKLRVGTFEHDTV+LVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQ
Sbjct: 1 MAPVSMMLSAAAVVAVPMAGAFVVNPSAGSAFTRQTYGAMQARSSHPIGSASSSTSSRQRTLRRHTHTNNLRCTATVP-----------------DQHALDPTLHDEEVGGEPVDHFRDFAYPQNMARWKKNTKQIATLGPASCTMEQIEALFLAGVDVFRLNFSHGAHDEKAKLVSIIRTIETKYKHPICVLADLQGPKLRVGTFEHDTVHLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQ 228
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A097IU45_9PHAE) HSP 1 Score: 330 bits (846), Expect = 6.830e-107 Identity = 174/241 (72.20%), Postives = 199/241 (82.57%), Query Frame = 1
Query: 10 IAVMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGAMRAQSSYPSSSSSSSNSCRQKTLRRHTHANLRCTATTXXXEGGTAAXXXTAAMSADQHALDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQE 732
+AVMLS +A AVPMA FV NP+ S+FTRQ+ GA+RA+S+YP SS+ N+ RQ+T+RRHTH +L CTAT DQHALDPTLH++ GA E+D+F+DFAYPQNKARWKKNTKQIATLGPASCT +QIEALFLAGVDVFRLNFSHG H++KA+LV+ IR IETKYKHPICILADLQGPKLRVG FEHDTVNLVDGQMFRFDMDDEPGD+ARVKLPHKEIIDTL+E
Sbjct: 6 LAVMLSLSA-AVPMATGFVANPSAGSSFTRQTLGALRARSAYPGSSNG--NTSRQRTVRRHTHTSLHCTATVP-----------------DQHALDPTLHEDVGGAPEVDYFQDFAYPQNKARWKKNTKQIATLGPASCTKDQIEALFLAGVDVFRLNFSHGAHEEKAKLVTTIREIETKYKHPICILADLQGPKLRVGVFEHDTVNLVDGQMFRFDMDDEPGDSARVKLPHKEIIDTLRE 226
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU1_9PHAE) HSP 1 Score: 262 bits (669), Expect = 9.570e-86 Identity = 148/181 (81.77%), Postives = 157/181 (86.74%), Query Frame = 1
Query: 1 MAPIA-VMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGAMRAQSSYPSSSSSSSNS----CRQKTLRRHTHANLRCTATTXXXEGGTAAXXXTAAMSADQHALDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSI 528
MAP+A VMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGAMRA+ YPSSS CRQ+TLRRHTHANLRCTATT EG TAA TAA++ADQHALDPTLHDEED AAE+DHFRDFAYPQNKARWKKNTKQIATLGPASCT EQIEALFLAGVDVFRLNFSHGDHDQK E+ ++
Sbjct: 1 MAPVAAVMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGAMRARPHYPSSSXXXXXXXXXXCRQQTLRRHTHANLRCTATTTA-EGNTAA---TAAVAADQHALDPTLHDEED-AAEVDHFRDFAYPQNKARWKKNTKQIATLGPASCTEEQIEALFLAGVDVFRLNFSHGDHDQKGEVTTL 176
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=2 Tax=Laminariales TaxID=2886 RepID=A0A097IU24_UNDPI) HSP 1 Score: 268 bits (684), Expect = 9.960e-83 Identity = 158/252 (62.70%), Postives = 173/252 (68.65%), Query Frame = 1
Query: 1 MAPIAVMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGA------MRAQSSYPSSSSSSSNSCRQKTLRRHTHANLRCTATTXXXEGGTAAXXXTAAMSADQHALDPTLHDEED--GAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQE 732
MAP+A+ L +A VPMAGAFV NP S TR G R+ ++YP S T RR A LRCTAT DQ LD +HD A E DHFRDFAYP NKARWKKNTKQIATLGPASCT EQIEALFLAGVDVFRLNFSHG H++KA LV+IIR IE K+KHPIC+LADLQGPKLRVG F+ DTVNLVDGQ+FRFDMDDEPGDAARVKLPHKEIIDTL+E
Sbjct: 1 MAPLALGLMLSASVVPMAGAFVANPAAISIVTRAMGGLGGAIQPTRSNTAYPVS----------WTGRR---AALRCTATLP-----------------DQTKLDAAIHDSSAVIAAEEFDHFRDFAYPANKARWKKNTKQIATLGPASCTFEQIEALFLAGVDVFRLNFSHGAHEEKANLVTIIRDIEAKFKHPICVLADLQGPKLRVGVFDKDTVNLVDGQLFRFDMDDEPGDAARVKLPHKEIIDTLKE 222
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IU52_9PHAE) HSP 1 Score: 267 bits (683), Expect = 1.470e-82 Identity = 151/242 (62.40%), Postives = 171/242 (70.66%), Query Frame = 1
Query: 7 PIAVMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGAMRAQSSYPSSSSSSSNSCRQKTLRRHTHANLRCTATTXXXEGGTAAXXXTAAMSADQHALDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQE 732
P+A+M S A P+A AFV NP+ SA R++ G MRA T R +L T + A+ ADQH LDPT+H+E DGA E+DHFRD+A+P NKARWKKNTKQIATLGPAS T EQIE LFLAGVDVFRLNFSHG H++KAELV +IR IE KYKHPICILADLQGPKLRVG F D+V+LVDGQMFRFDMDDEPGDAARV+LPHKEIIDTLQE
Sbjct: 4 PLALMFSMAVA--PIATAFVANPSG-SAIARRTVGDMRA------------------TAARARPRSLPSRRTALYSAAPASVSAAAASTVADQHKLDPTVHNEVDGALEVDHFRDYAFPLNKARWKKNTKQIATLGPASRTFEQIERLFLAGVDVFRLNFSHGAHEEKAELVQVIREIEAKYKHPICILADLQGPKLRVGVFGKDSVHLVDGQMFRFDMDDEPGDAARVQLPHKEIIDTLQE 224
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=5 Tax=Sargassum TaxID=3015 RepID=A0A097IU41_9PHAE) HSP 1 Score: 253 bits (646), Expect = 3.410e-77 Identity = 146/244 (59.84%), Postives = 169/244 (69.26%), Query Frame = 1
Query: 1 MAPIAVMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGAMRAQSSYPSSSSSSSNSCRQKTLRRHTHANLRCTATTXXXEGGTAAXXXTAAMSADQHALDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQE 732
MAP++++ A VA+P+AGAFVVNP + S RQ+ G +R + P + L R CTAT H LDPTL + G E+DHF+DFAYP NKARWKK TKQ+ATLGPAS T EQ+EALFLAGVDVFRLNFSHG H++KAELV IR +E KYKHPICILADLQGPKLRVG FE D+VNLVDGQMFRFDMDDEPGDAARVKLPH+EII+TL+E
Sbjct: 1 MAPLSLVFCA--VALPVAGAFVVNPAS-SVIARQTAGDLRGR--LPRTG--------PLRLGRRVCTTPSCTATV--------------------HELDPTLREPVGGEPEVDHFKDFAYPANKARWKKFTKQVATLGPASRTFEQLEALFLAGVDVFRLNFSHGVHEEKAELVKTIREVEAKYKHPICILADLQGPKLRVGVFEKDSVNLVDGQMFRFDMDDEPGDAARVKLPHEEIINTLRE 211
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IU61_9PHAE) HSP 1 Score: 243 bits (621), Expect = 1.960e-73 Identity = 117/152 (76.97%), Postives = 129/152 (84.87%), Query Frame = 1
Query: 271 MSADQHALDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTL 726
++ D H LDPTLHD+ +GA EID FRD+AYP NK RWKKNTKQ+ATLGPAS T EQIEALFLAGVDVFRLNFSHG HD+KAELV IR +E KYKHPICILADLQGPKLRVG F+ D V L DGQ+FRFDMDD PGD RV+LPH+EIIDTL
Sbjct: 63 VTVDTHKLDPTLHDDGEGAPEIDFFRDYAYPANKMRWKKNTKQVATLGPASRTFEQIEALFLAGVDVFRLNFSHGQHDEKAELVLTIRRVEAKYKHPICILADLQGPKLRVGVFQGDKVTLADGQLFRFDMDDTPGDDTRVQLPHREIIDTL 214
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A097IU63_9PHAE) HSP 1 Score: 243 bits (620), Expect = 3.560e-73 Identity = 117/151 (77.48%), Postives = 127/151 (84.11%), Query Frame = 1
Query: 280 DQHALDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQE 732
D H LDPTLHD DG E+D+F+D+AYP NK RWKKNTKQIATLGPASCT EQIE LFLAGVDVFRLNFSHG HD+KA+LV +IR +E KYKHPICILADLQGPKLRVGTFE D V LV+GQ FRFDMD+E GDA RV LPH EII TL E
Sbjct: 79 DSHTLDPTLHDPRDGEKEVDYFKDYAYPANKMRWKKNTKQIATLGPASCTKEQIEELFLAGVDVFRLNFSHGAHDEKAKLVLLIREVEAKYKHPICILADLQGPKLRVGTFEKDKVTLVEGQTFRFDMDEELGDAGRVMLPHPEIIYTLSE 229
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA73_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.190e-58 Identity = 101/145 (69.66%), Postives = 114/145 (78.62%), Query Frame = 1
Query: 292 LDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTL 726
+DP D A E D F D A+ NK RWKK TKQ+ATLGPAS + E IEALFLAG DVFRLNFSHG HD+KA+LV +IR +ETKY+HPIC+LADLQGPKLRV FEHD V +V GQ FRFDM+DEPGDA RVKLPH EII+TL
Sbjct: 67 MDPAKVD----ATEPDPFADEAFATNKPRWKKKTKQVATLGPASSSLEMIEALFLAGADVFRLNFSHGAHDEKAKLVELIREVETKYRHPICVLADLQGPKLRVDVFEHDKVTVVQGQQFRFDMEDEPGDARRVKLPHPEIINTL 207 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7938.16096.1 >prot_E_fasciculatus_S2_contig7938.16096.1 ID=prot_E_fasciculatus_S2_contig7938.16096.1|Name=mRNA_E_fasciculatus_S2_contig7938.16096.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=247bp MAPIAVMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGAMRAQSSYPSSSSback to top mRNA from alignment at E_fasciculatus_S2_contig7938:2757..7007+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7938.16096.1 ID=mRNA_E_fasciculatus_S2_contig7938.16096.1|Name=mRNA_E_fasciculatus_S2_contig7938.16096.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4251bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7938:2757..7007+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7938:2757..7007+ >mRNA_E_fasciculatus_S2_contig7938.16096.1 ID=mRNA_E_fasciculatus_S2_contig7938.16096.1|Name=mRNA_E_fasciculatus_S2_contig7938.16096.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=741bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7938:2757..7007+ (Ectocarpus fasciculatus EfasUO2)back to top |