mRNA_E_fasciculatus_S2_contig789.16049.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig789.16049.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE6_9PHAE) HSP 1 Score: 303 bits (776), Expect = 7.130e-95 Identity = 144/158 (91.14%), Postives = 149/158 (94.30%), Query Frame = 1
Query: 1 DQNRLGDEENLLLMRYLVKIGCEPGAVGSMTTLASPLDPLFYMLHSMFEKALHIVWLSPKYRDSFSMDWA-DGPCPGSGYTDELPFTEAVLGLGDGTAFMTNERLLELLHPSNPAVPYIYEDFAKWGTSDLEQWDPYNKKNEGSPLPSEKNGERRGSE 471
DQNRL DEENLLLMRYL+KIGCEPGAVGSM TLASPLDPLFYMLHSMFEKALHI+WLSPKYRDSFSMDWA DG CPGSGYTDELPFTE +LGLG+GTAFMTNERLLELLHPSNPAVPYIYEDFA+WGTSDLEQWDPYN KNEG P PSEK GERRGSE
Sbjct: 127 DQNRLSDEENLLLMRYLIKIGCEPGAVGSMMTLASPLDPLFYMLHSMFEKALHILWLSPKYRDSFSMDWAEDGLCPGSGYTDELPFTEYLLGLGEGTAFMTNERLLELLHPSNPAVPYIYEDFARWGTSDLEQWDPYNTKNEGFPPPSEKKGERRGSE 284
BLAST of mRNA_E_fasciculatus_S2_contig789.16049.1 vs.
Match: TYRosinase (family member (Tyr-3) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP10_ECTSI) HSP 1 Score: 290 bits (743), Expect = 1.280e-85 Identity = 138/158 (87.34%), Postives = 144/158 (91.14%), Query Frame = 1
Query: 1 DQNRLGDEENLLLMRYLVKIGCEPGAVGSMTTLASPLDPLFYMLHSMFEKALHIVWLSPKYRDSFSMDWA-DGPCPGSGYTDELPFTEAVLGLGDGTAFMTNERLLELLHPSNPAVPYIYEDFAKWGTSDLEQWDPYNKKNEGSPLPSEKNGERRGSE 471
DQ RL DEENLLLMRYL+KIGCEPGAVGSMTTLASPLDPLFYMLHSMFEKALHIVWLSP+YRDSFSMDWA DG CPGSGYTDELPFTE++LGLG+GT F+TNERL ELLHPSNPAVPYIYEDFAKWGTSDLEQWDPYN KNEG P SEK GE G E
Sbjct: 473 DQTRLSDEENLLLMRYLIKIGCEPGAVGSMTTLASPLDPLFYMLHSMFEKALHIVWLSPRYRDSFSMDWAEDGICPGSGYTDELPFTESLLGLGEGTTFVTNERLFELLHPSNPAVPYIYEDFAKWGTSDLEQWDPYNTKNEGFPPLSEKKGEGHGRE 630
BLAST of mRNA_E_fasciculatus_S2_contig789.16049.1 vs.
Match: Hypothetical (tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM86_ECTSI) HSP 1 Score: 189 bits (480), Expect = 2.460e-48 Identity = 84/131 (64.12%), Postives = 106/131 (80.92%), Query Frame = 1
Query: 1 DQNRLGDEENLLLMRYLVKIGCEPGAVGSMTTLASPLDPLFYMLHSMFEKALHIVWLSPKYRDSFSMDWADGPCPGSGYTDELPFTEAVLGLGDGTAFMTNERLLELLHPSNPAVPYIYEDFAKWGTSDLE 393
D R+ DE + LMR LVKIGCEPGAVG+M++ ASP+DPLF++LH +F+KA+HI+ LSPKY D ++M+W DG CPGSGYTDELP TE LGLG GT ++TNE+LLELL+PSNPA+PY+Y D +WG D E
Sbjct: 479 DGQRMSDEHAMFLMRTLVKIGCEPGAVGTMSSTASPVDPLFWVLHPLFDKAMHILLLSPKY-DEYTMEWVDGECPGSGYTDELPITERSLGLGPGTDYLTNEQLLELLYPSNPALPYVYTDLPRWGDKDTE 608
BLAST of mRNA_E_fasciculatus_S2_contig789.16049.1 vs.
Match: Common (central domain of tyrosinase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG6_ECTSI) HSP 1 Score: 168 bits (425), Expect = 8.160e-41 Identity = 73/131 (55.73%), Postives = 95/131 (72.52%), Query Frame = 1
Query: 10 RLGDEENLLLMRYLVKIGCEPGAVGSMTTLASPLDPLFYMLHSMFEKALHIVWLSPKYRDSFSMDWADGPCPGSGYTDELPFTEAVLGLGDGTAFMTNERLLELLHPSNPAVPYIYEDFAKWGTSDLEQWD 402
RL D+ + L+R +VK+GCEPGAVG M SP+DPLF++LH MFEKALH++W+SP YRD +S WADG C GS D LPFT LG+G GT +TN L+++LHPSNP +P+++E F WGT+ E WD
Sbjct: 468 RLDDDATMFLLRQVVKLGCEPGAVGVMVGGVSPMDPLFWVLHPMFEKALHVLWMSPTYRDGYSFGWADGSCSGSKVDDILPFTAQDLGMGAGTELLTNRELMDILHPSNPRLPFVFEKFDTWGTA--ESWD 596
BLAST of mRNA_E_fasciculatus_S2_contig789.16049.1 vs.
Match: TYR (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMG1_9PHAE) HSP 1 Score: 157 bits (396), Expect = 6.660e-37 Identity = 76/145 (52.41%), Postives = 99/145 (68.28%), Query Frame = 1
Query: 10 RLGDEENLLLMRYLVKIGCEPGAVGSMTTLASPLDPLFYMLHSMFEKALHIVWLSPKYRDSFSMDWADGPC----PGSGYTDELPFTEAVLGLGDGTAFMTNERLLELLHPSNPAVPYIYEDFAKWGTSDLEQWDPYNKKNEGSP 432
RL DE +LL+R L+ IGCEPG VG+M+T A+PLDP+F+ LH+ F+KA HI+ LSP YRD++ W D G D P+TE +LGLGDGT +TN L+E+LHPSNP +PY+YE F KWGT WDP + ++GSP
Sbjct: 492 RLDDESIMLLLRQLMVIGCEPGEVGAMSTGAAPLDPIFWALHAGFDKAQHILQLSPGYRDTYDFAWVDSESCDDMSGGKLDDLYPWTERMLGLGDGTELLTNSDLVEILHPSNPKLPYVYEGFNKWGT--CTDWDPCPECDDGSP 634
BLAST of mRNA_E_fasciculatus_S2_contig789.16049.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIG4_9PHAE) HSP 1 Score: 148 bits (374), Expect = 4.240e-36 Identity = 77/185 (41.62%), Postives = 103/185 (55.68%), Query Frame = 1
Query: 1 DQNRLGDEENLLLMRYLVKIGCEPGAVGSMTTLASPLDPLFYMLHSMFEKALHIVWLSPKYRDSFSMDWADGPCPGSGYTDELPFT------------------------------------------------------EAVLGLGDGTAFMTNERLLELLHPSNPAVPYIYEDFAKWGTSDLE 393
D +R+ DE + LMR LVKIGCEPGAVG M+T ASP++P+F++LH +FEKA+HI+ LSPKY D ++M+W DG C GSGYT+EL T E +GLG G F+TN++LLEL++PSNPA+P IY + +WG +D E
Sbjct: 144 DDHRVSDEHAVFLMRTLVKIGCEPGAVGIMSTAASPVNPMFWVLHPLFEKAMHILLLSPKY-DDYTMEWVDGECKGSGYTEELTITGEAHTAEDSYVLLAEHKVVHDRSSQHGDEKRIPSRLNSRLRRVTRDEGQRLHARELAIGLGPGEDFLTNQQLLELMYPSNPALPQIYNNLPRWGGTDTE 327
BLAST of mRNA_E_fasciculatus_S2_contig789.16049.1 vs.
Match: Tyrosinase_Cu-bd (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPW4_9PHAE) HSP 1 Score: 154 bits (388), Expect = 1.710e-35 Identity = 71/136 (52.21%), Postives = 93/136 (68.38%), Query Frame = 1
Query: 10 RLGDEENLLLMRYLVKIGCEPGAVGSMTTLASPLDPLFYMLHSMFEKALHIVWLSPKYRDSFSMDWADGPC----PGSGYTDELPFTEAVLGLGDGTAFMTNERLLELLHPSNPAVPYIYEDFAKWGTSDLEQWDP 405
RL +E +LL+R ++ IGC+PG VG+M+T A+PLDP+F+ LHS FEKA HI+ LSP YRD++ +W D C G D P+TE LGLG+G+ +TN L E+LHPSNP +PY+YE F KWGT WDP
Sbjct: 610 RLDEESTMLLLRQMMVIGCQPGKVGAMSTGAAPLDPIFWTLHSGFEKAQHILQLSPGYRDAYDFEWVDADCGDGVAGGKLDDVYPWTEQTLGLGEGSELLTNADLTEILHPSNPKLPYLYEAFGKWGT--CTDWDP 743
BLAST of mRNA_E_fasciculatus_S2_contig789.16049.1 vs.
Match: Hypothetical (tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G530_ECTSI) HSP 1 Score: 128 bits (322), Expect = 1.080e-27 Identity = 56/86 (65.12%), Postives = 71/86 (82.56%), Query Frame = 1
Query: 1 DQNRLGDEENLLLMRYLVKIGCEPGAVGSMTTLASPLDPLFYMLHSMFEKALHIVWLSPKYRDSFSMDWADGPCPGSGYTDELPFT 258
D +R+ DE + LMR LVKIGCEPGAVG M+T ASP+DP+F++LH +FEKA+H++ LSPKY D ++M+W DG CPGSGYTDELP T
Sbjct: 441 DDHRMSDEHAMFLMRTLVKIGCEPGAVGMMSTAASPVDPIFWVLHPLFEKAMHVLLLSPKY-DEYTMEWVDGECPGSGYTDELPIT 525
BLAST of mRNA_E_fasciculatus_S2_contig789.16049.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD0_9PHAE) HSP 1 Score: 123 bits (309), Expect = 1.190e-26 Identity = 58/135 (42.96%), Postives = 84/135 (62.22%), Query Frame = 1
Query: 10 RLGDEENLLLMRYLVKIGCEPGAVGSMTTLASPLDPLFYMLHSMFEKALHIVWLSPKYRDSFSMDWADGPCP---GSGYTDE-LPFTEAVLGLGDGTAFMTNERLLELLHPSNPAVPYIYEDFAKWGTSDLEQWD 402
RL ++N+LLMR L+ + CEPGA+G+M+ S LDP+F+ LH +FEKA ++ LSP Y+D++ W C G DE +PFTE G GDG +TN+ +++ L P+NP +PY+Y+ F WG WD
Sbjct: 279 RLEHDDNMLLMRTLLTLACEPGALGAMSVGPSILDPVFWALHPIFEKATQLLQLSPTYKDTYDFTWVGIDCGDGVSGGQVDETMPFTERDFGFGDGDEPLTNQEIIDFLFPTNPRLPYVYDKFDSWGV--CTDWD 411
BLAST of mRNA_E_fasciculatus_S2_contig789.16049.1 vs.
Match: N/a (n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVH6_ECTSI) HSP 1 Score: 125 bits (313), Expect = 3.850e-26 Identity = 59/135 (43.70%), Postives = 84/135 (62.22%), Query Frame = 1
Query: 10 RLGDEENLLLMRYLVKIGCEPGAVGSMTTLASPLDPLFYMLHSMFEKALHIVWLSPKYRDSFSMDWADGPCP---GSGYTDE-LPFTEAVLGLGDGTAFMTNERLLELLHPSNPAVPYIYEDFAKWGTSDLEQWD 402
RL ++N+LLMR L+ + CEPGA+G+M+ S LDP+F+ LH +FEKA I+ LSP Y+D++ W C G DE +PFTE G GDG +TN+ +++ L P+NP +PY+Y+ F WG WD
Sbjct: 576 RLEHDDNMLLMRTLLTLACEPGALGAMSVGPSILDPVFWALHPIFEKATQILQLSPTYKDTYDFTWVGKDCGDGVSGGQVDETMPFTERDFGFGDGDEPLTNQEIIDFLFPTNPRLPYVYDKFDSWGA--CTDWD 708 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig789.16049.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig789.16049.1 >prot_E_fasciculatus_S2_contig789.16049.1 ID=prot_E_fasciculatus_S2_contig789.16049.1|Name=mRNA_E_fasciculatus_S2_contig789.16049.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=145bp MRYLVKIGCEPGAVGSMTTLASPLDPLFYMLHSMFEKALHIVWLSPKYRDback to top mRNA from alignment at E_fasciculatus_S2_contig789:7108..10756+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig789.16049.1 ID=mRNA_E_fasciculatus_S2_contig789.16049.1|Name=mRNA_E_fasciculatus_S2_contig789.16049.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3649bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig789:7108..10756+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig789:7108..10756+ >mRNA_E_fasciculatus_S2_contig789.16049.1 ID=mRNA_E_fasciculatus_S2_contig789.16049.1|Name=mRNA_E_fasciculatus_S2_contig789.16049.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=435bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig789:7108..10756+ (Ectocarpus fasciculatus EfasUO2)back to top |