mRNA_E_fasciculatus_S2_contig7810.15979.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7810.15979.1 vs.
Match: Vacuolar (proton pump subunit B n=3 Tax=PX clade TaxID=569578 RepID=D8LCT6_ECTSI) HSP 1 Score: 229 bits (583), Expect = 4.010e-71 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1
Query: 1 AFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVFDSHDDNFAIVFGAMGVNMETAR 333
AFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVFDSHDDNFAIVFGAMGVNMETAR
Sbjct: 111 AFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVFDSHDDNFAIVFGAMGVNMETAR 221
BLAST of mRNA_E_fasciculatus_S2_contig7810.15979.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A396ZSN4_9STRA) HSP 1 Score: 206 bits (525), Expect = 6.410e-66 Identity = 98/111 (88.29%), Postives = 103/111 (92.79%), Query Frame = 1
Query: 1 AFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVFDSHDDNFAIVFGAMGVNMETAR 333
AFNGSGK ID PPV+AEDYLDI GQPINPSCRDYPK MIQTGISAIDVMNS+ARGQKIPLFSAAGLPHNE+AAQICRQA LV++KDV DSH DNFAIVFGAMGVNMETAR
Sbjct: 80 AFNGSGKAIDGGPPVVAEDYLDIQGQPINPSCRDYPKEMIQTGISAIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVQRKDVMDSHQDNFAIVFGAMGVNMETAR 190
BLAST of mRNA_E_fasciculatus_S2_contig7810.15979.1 vs.
Match: Vacuolar (proton pump subunit B n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY44_9STRA) HSP 1 Score: 215 bits (548), Expect = 6.420e-66 Identity = 104/111 (93.69%), Postives = 106/111 (95.50%), Query Frame = 1
Query: 1 AFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVFDSHDDNFAIVFGAMGVNMETAR 333
AFNGSGKCIDNAPPVLAE+YLDI GQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNE AAQICRQASLVK KD DSH+DNFAIVFGAMGVNMETAR
Sbjct: 104 AFNGSGKCIDNAPPVLAENYLDIQGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNETAAQICRQASLVKLKDTMDSHEDNFAIVFGAMGVNMETAR 214
BLAST of mRNA_E_fasciculatus_S2_contig7810.15979.1 vs.
Match: Vacuolar (proton pump subunit B n=2 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7R9UDM1_9STRA) HSP 1 Score: 209 bits (532), Expect = 1.550e-63 Identity = 99/110 (90.00%), Postives = 106/110 (96.36%), Query Frame = 1
Query: 4 FNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVFDSHDDNFAIVFGAMGVNMETAR 333
FNGSGKCID APPV+AEDYLDI GQPINPSCRDYPKAMIQTGISAIDVMN++ARGQKIP+FSA+GLPH+EVAAQI RQASLVKQKDV DSH+DNFAIVFGAMGVNMETAR
Sbjct: 107 FNGSGKCIDRAPPVVAEDYLDIQGQPINPSCRDYPKAMIQTGISAIDVMNTIARGQKIPIFSASGLPHSEVAAQIARQASLVKQKDVMDSHEDNFAIVFGAMGVNMETAR 216
BLAST of mRNA_E_fasciculatus_S2_contig7810.15979.1 vs.
Match: Vacuolar (proton pump subunit B n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAE7_PYTIN) HSP 1 Score: 209 bits (531), Expect = 3.170e-63 Identity = 99/110 (90.00%), Postives = 104/110 (94.55%), Query Frame = 1
Query: 4 FNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVFDSHDDNFAIVFGAMGVNMETAR 333
FNGSGK ID APPV+AEDYLDI GQPINPSCRDYPK MIQTGISAIDVMNS+ARGQKIPLFSAAGLPHNE+AAQICRQA LVK+KDV DSH+DNFAIVFGAMGVNMETAR
Sbjct: 109 FNGSGKAIDGAPPVVAEDYLDIQGQPINPSCRDYPKEMIQTGISAIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRKDVMDSHEDNFAIVFGAMGVNMETAR 218
BLAST of mRNA_E_fasciculatus_S2_contig7810.15979.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CLP2_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.140e-62 Identity = 98/111 (88.29%), Postives = 103/111 (92.79%), Query Frame = 1
Query: 1 AFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVFDSHDDNFAIVFGAMGVNMETAR 333
AFNGSGK ID PPV+AEDYLDI GQPINPSCRDYPK MIQTGISAIDVMNS+ARGQKIPLFSAAGLPHNE+AAQICRQA LV++KDV DSH DNFAIVFGAMGVNMETAR
Sbjct: 248 AFNGSGKAIDGGPPVVAEDYLDIQGQPINPSCRDYPKEMIQTGISAIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVQRKDVMDSHQDNFAIVFGAMGVNMETAR 358
BLAST of mRNA_E_fasciculatus_S2_contig7810.15979.1 vs.
Match: Vacuolar (proton pump subunit B n=39 Tax=Oomycota TaxID=4762 RepID=K3X8G8_GLOUD) HSP 1 Score: 207 bits (526), Expect = 1.210e-62 Identity = 99/111 (89.19%), Postives = 104/111 (93.69%), Query Frame = 1
Query: 1 AFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVFDSHDDNFAIVFGAMGVNMETAR 333
AFNGSGK ID APPV+AEDYLDI GQPINPSCRDYPK MIQTGISAIDVMNS+ARGQKIPLFSAAGLPHNE+AAQI RQA LV++KDV DSHDDNFAIVFGAMGVNMETAR
Sbjct: 111 AFNGSGKAIDGAPPVIAEDYLDIQGQPINPSCRDYPKEMIQTGISAIDVMNSIARGQKIPLFSAAGLPHNEIAAQIVRQAGLVQRKDVMDSHDDNFAIVFGAMGVNMETAR 221
BLAST of mRNA_E_fasciculatus_S2_contig7810.15979.1 vs.
Match: VatB (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TKB5_SYMMI) HSP 1 Score: 199 bits (505), Expect = 1.540e-62 Identity = 97/111 (87.39%), Postives = 102/111 (91.89%), Query Frame = 1
Query: 1 AFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVFDSHDDNFAIVFGAMGVNMETAR 333
+FNGSGK ID APPVLAEDYLDIMG PINPS RDYPKAMIQTGISAIDVMNS+ARGQKIPLFSAAGLPHNEVAAQI RQASLV+ KD D H+DNFAIVFGAMGVNMET+R
Sbjct: 107 SFNGSGKQIDGAPPVLAEDYLDIMGMPINPSSRDYPKAMIQTGISAIDVMNSIARGQKIPLFSAAGLPHNEVAAQIVRQASLVRLKDTLDGHEDNFAIVFGAMGVNMETSR 217
BLAST of mRNA_E_fasciculatus_S2_contig7810.15979.1 vs.
Match: Vacuolar (proton pump subunit B n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FRS5_9STRA) HSP 1 Score: 206 bits (525), Expect = 2.520e-62 Identity = 98/111 (88.29%), Postives = 103/111 (92.79%), Query Frame = 1
Query: 1 AFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVFDSHDDNFAIVFGAMGVNMETAR 333
AFNGSGK ID PPV+AEDYLDI GQPINPSCRDYPK MIQTGISAIDVMNS+ARGQKIPLFSAAGLPHNE+AAQICRQA LV++KDV DSH DNFAIVFGAMGVNMETAR
Sbjct: 120 AFNGSGKAIDGGPPVVAEDYLDIQGQPINPSCRDYPKEMIQTGISAIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVQRKDVMDSHQDNFAIVFGAMGVNMETAR 230
BLAST of mRNA_E_fasciculatus_S2_contig7810.15979.1 vs.
Match: GP-PDE (domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A396ZUY4_9STRA) HSP 1 Score: 206 bits (525), Expect = 8.610e-62 Identity = 98/111 (88.29%), Postives = 103/111 (92.79%), Query Frame = 1
Query: 1 AFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVFDSHDDNFAIVFGAMGVNMETAR 333
AFNGSGK ID PPV+AEDYLDI GQPINPSCRDYPK MIQTGISAIDVMNS+ARGQKIPLFSAAGLPHNE+AAQICRQA LV++KDV DSH DNFAIVFGAMGVNMETAR
Sbjct: 447 AFNGSGKAIDGGPPVVAEDYLDIQGQPINPSCRDYPKEMIQTGISAIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVQRKDVMDSHQDNFAIVFGAMGVNMETAR 557 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7810.15979.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7810.15979.1 >prot_E_fasciculatus_S2_contig7810.15979.1 ID=prot_E_fasciculatus_S2_contig7810.15979.1|Name=mRNA_E_fasciculatus_S2_contig7810.15979.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=112bp AFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMback to top mRNA from alignment at E_fasciculatus_S2_contig7810:5395..6512- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7810.15979.1 ID=mRNA_E_fasciculatus_S2_contig7810.15979.1|Name=mRNA_E_fasciculatus_S2_contig7810.15979.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1118bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7810:5395..6512- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7810:5395..6512- >mRNA_E_fasciculatus_S2_contig7810.15979.1 ID=mRNA_E_fasciculatus_S2_contig7810.15979.1|Name=mRNA_E_fasciculatus_S2_contig7810.15979.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=336bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7810:5395..6512- (Ectocarpus fasciculatus EfasUO2)back to top |