mRNA_E_fasciculatus_S2_contig7787.15953.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7787.15953.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0U4_9PHAE) HSP 1 Score: 181 bits (459), Expect = 2.790e-45 Identity = 96/129 (74.42%), Postives = 108/129 (83.72%), Query Frame = 1
Query: 1 TTSLFLDAVTVVLDQACCDGEREHWFASTKQLQLASLQVCEACREAAALHLRVDTSNQQRLLTPADPNPSD-SDTGSRVPRLRAREVRWNLTSAQQLSSPISALASAQVFTFSDQFNDVLDAVVWPASL 384
T S FLD V VVL+QAC DG ++HWFASTK+LQLASLQ+CEACR+AAALHLRV+TS RLL PAD +PSD S+ G+RVPRLRAREV W+LTSA +LSS I ALASAQVFTFSD N VLDAVVWP SL
Sbjct: 25 TNSRFLDVVIVVLNQACGDGGQKHWFASTKELQLASLQLCEACRDAAALHLRVNTSTPLRLLAPAD-SPSDGSEEGTRVPRLRAREVSWDLTSADRLSSSIYALASAQVFTFSDSLNAVLDAVVWPTSL 152
BLAST of mRNA_E_fasciculatus_S2_contig7787.15953.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL9_ECTSI) HSP 1 Score: 126 bits (316), Expect = 1.740e-29 Identity = 71/129 (55.04%), Postives = 82/129 (63.57%), Query Frame = 1
Query: 1 TTSLFLDAVTVVLDQACCDGEREHWFASTKQLQLASLQVCEACREAAALHLRVDTSNQQRLLTPADPNPSDSDTGSRVPRLRAREVRWNLTSAQQLSSPISALASAQVFTFSDQFNDVLDAVVWPASLR 387
T S FLD VVL+QAC DG ++HWFASTK+LQLASLQ+CEACR+AAALHLRVDTS RL PAD DS+ +RVPRLRARE TF +FN L+AV +PASLR
Sbjct: 25 TGSRFLDVAIVVLNQACGDGGQKHWFASTKELQLASLQLCEACRDAAALHLRVDTSTPLRLFAPADSPSDDSEEDTRVPRLRAREQ----------------------LTFGRRFNRPLEAVSFPASLR 131
BLAST of mRNA_E_fasciculatus_S2_contig7787.15953.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE) HSP 1 Score: 105 bits (261), Expect = 1.950e-20 Identity = 58/133 (43.61%), Postives = 77/133 (57.89%), Query Frame = 1
Query: 1 TTSLFLDAVTVVLDQACCDGEREHWFASTKQLQLASLQVCEACREAAALHLRVDTSNQQRLLTPADPNPSDSDT--GSRVPRLRAREVRWNLTSAQQLSSPISALASAQVFTFSDQFNDVLDAVVWPASLRRL 393
T L+A+ V L++ C DG+ W+ STK+LQLASL C ACR +HL VD +RLL AD P +RVPRLR+R V WN+ +A +L +PI A+ + F D F D L+AV WP LR +
Sbjct: 47 TRKFCLEALIVALNETC-DGKS--WYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTM 176
BLAST of mRNA_E_fasciculatus_S2_contig7787.15953.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE) HSP 1 Score: 102 bits (253), Expect = 5.580e-19 Identity = 58/133 (43.61%), Postives = 77/133 (57.89%), Query Frame = 1
Query: 1 TTSLFLDAVTVVLDQACCDGEREHWFASTKQLQLASLQVCEACREAAALHLRVDTSNQQRLLTPAD-PNPSDSDT-GSRVPRLRAREVRWNLTSAQQLSSPISALASAQVFTFSDQFNDVLDAVVWPASLRRL 393
T S L +TV L++ C DG+ W+ STK+LQLASL++C ACR LHL VD +RLL AD P+P G+RVPRLRAR WN+ +A + + I A F F+ LDA+VWP L+ +
Sbjct: 132 TRSSCLKTLTVALNETC-DGKS--WYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTI 261
BLAST of mRNA_E_fasciculatus_S2_contig7787.15953.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4H1_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 2.000e-18 Identity = 62/137 (45.26%), Postives = 73/137 (53.28%), Query Frame = 1
Query: 4 TSLFLDAVTVVLDQACCDGEREHWFASTKQLQLASLQVCEACREAAALHLRVDTSNQQRLLTPADPNPS------DSDTG-SRVPRLRAREVRWNLTSAQQLSSPISALASAQVFTFSDQFNDVLDAVVWPASLRRL 393
+S L+A V L Q C D RE W+ ST QLQLASL C ACR++ L L VD S +RLL N + G SRVPR AREV W+ S +LS+ I ALA F FN + AV WP LRRL
Sbjct: 27 SSRCLEAFRVALQQTCLD--RESWYVSTTQLQLASLPFCLACRDSVTLCLTVDDSIPRRLLADVGGNEAVVAPAGPCQCGRSRVPRFHAREVTWHRQSCVELSASIYALAEVDFFILDGGFNRAIGAVAWPRKLRRL 161
BLAST of mRNA_E_fasciculatus_S2_contig7787.15953.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 2.480e-18 Identity = 52/128 (40.62%), Postives = 72/128 (56.25%), Query Frame = 1
Query: 16 LDAVTVVLDQACCDGEREHWFASTKQLQLASLQVCEACREAAALHLRVDTSNQQRLLTPADPNPSDSDT--GSRVPRLRAREVRWNLTSAQQLSSPISALASAQVFTFSDQFNDVLDAVVWPASLRRL 393
L ++ V L++ C DG W+ STK+LQ ASL+ C ACR +HL+VD + LL AD P +RVPRLRAR V WN+ +A +L +PI A+ F F+ L+AV WP L+ +
Sbjct: 15 LSSLIVALNETC-DGTS--WYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHPKRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLKMI 139
BLAST of mRNA_E_fasciculatus_S2_contig7787.15953.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 1.820e-17 Identity = 51/116 (43.97%), Postives = 70/116 (60.34%), Query Frame = 1
Query: 52 CDGEREHWFASTKQLQLASLQVCEACREAAALHLRVDTSNQQRLLTPADPNPSDSDTG--SRVPRLRAREVRWNLTSAQQLSSPISALASAQVFTFSDQFNDVLDAVVWPASLRRL 393
CDG+R W+ STK+LQLASL+ C ACR+ L L+VD + LL D P + +RVPRLRAR V+WN+ +A +L + + AL F FN L+AVVWP L+++
Sbjct: 29 CDGKR--WYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLAAVDAPPPHTKRPCRTRVPRLRARRVKWNMPTATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLKQI 142
BLAST of mRNA_E_fasciculatus_S2_contig7787.15953.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 3.370e-17 Identity = 53/116 (45.69%), Postives = 68/116 (58.62%), Query Frame = 1
Query: 52 CDGEREHWFASTKQLQLASLQVCEACREAAALHLRVDTSNQQRLLTPAD-PNP-SDSDTGSRVPRLRAREVRWNLTSAQQLSSPISALASAQVFTFSDQFNDVLDAVVWPASLRRL 393
CDG+R W+ STK+LQ ASL+ C ACR+ L LRVD + LL D P+P S +RVPRLRAR V WN+ +A +L SPI AL F F L++V WP L+ +
Sbjct: 2 CDGKR--WYTSTKELQQASLEFCIACRKYQTLRLRVDVQTPRTLLAAVDAPSPHSKRPCRTRVPRLRARRVIWNMPTATELKSPIFALKDVVRLDFGPAFEGSLESVAWPQRLKEI 115
BLAST of mRNA_E_fasciculatus_S2_contig7787.15953.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 2.700e-16 Identity = 58/133 (43.61%), Postives = 73/133 (54.89%), Query Frame = 1
Query: 1 TTSLFLDAVTVVLDQACCDGEREHWFASTKQLQLASLQVCEACREAAALHLRVDTSNQQRLLTPADPNPSDSDTGSR--VPRLRAREVRWNLTSAQQLSSPISALASAQVFTFSDQFNDVLDAVVWPASLRRL 393
T++ L+A+ V L + DG+ W+ STK+LQLASL+ C ACR LHL VD + LL AD P SR VPRLRAR V WN+ +A +L SPI AL F F L+AV WP L +
Sbjct: 32 TSNTCLNAIYVALGETR-DGKS--WYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESI 161
BLAST of mRNA_E_fasciculatus_S2_contig7787.15953.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 3.290e-16 Identity = 53/126 (42.06%), Postives = 73/126 (57.94%), Query Frame = 1
Query: 16 LDAVTVVLDQACCDGEREHWFASTKQLQLASLQVCEACREAAALHLRVDTSNQQRLLTPADPNPSDSDT--GSRVPRLRAREVRWNLTSAQQLSSPISALASAQVFTFSDQFNDVLDAVVWPASLR 387
L+A+ V L++ DG+ W+ STK+ QLASL+ C ACR L L+VD+ +RLL AD P G+RVPRLRAR V W++ +A L + I ++ A F F D L+AV WP L+
Sbjct: 13 LNAIIVALNETS-DGKS--WYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPPHPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFEDSLEAVAWPRRLK 135 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7787.15953.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7787.15953.1 >prot_E_fasciculatus_S2_contig7787.15953.1 ID=prot_E_fasciculatus_S2_contig7787.15953.1|Name=mRNA_E_fasciculatus_S2_contig7787.15953.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=643bp TTSLFLDAVTVVLDQACCDGEREHWFASTKQLQLASLQVCEACREAAALHback to top mRNA from alignment at E_fasciculatus_S2_contig7787:917..2845+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7787.15953.1 ID=mRNA_E_fasciculatus_S2_contig7787.15953.1|Name=mRNA_E_fasciculatus_S2_contig7787.15953.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1929bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7787:917..2845+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7787:917..2845+ >mRNA_E_fasciculatus_S2_contig7787.15953.1 ID=mRNA_E_fasciculatus_S2_contig7787.15953.1|Name=mRNA_E_fasciculatus_S2_contig7787.15953.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1929bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7787:917..2845+ (Ectocarpus fasciculatus EfasUO2)back to top |