mRNA_E_fasciculatus_S2_contig7665.15835.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7665.15835.1
Unique NamemRNA_E_fasciculatus_S2_contig7665.15835.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7665.15835.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K923_9PHAE)

HSP 1 Score: 585 bits (1508), Expect = 3.180e-202
Identity = 295/315 (93.65%), Postives = 304/315 (96.51%), Query Frame = 1
Query:    1 VRLNNKQRLGILACACAAGVAATFGSVFGGTLFSVEVTATAYMVDTLPATFLCAVVVAVVFWLSGQGDLFALISDNTAQAQGFTATDLMAWAVLGAVCGLVGAWFVAVLDALSRRRNFFTRKDLDPYTRRKRMFVVVALATLLVIPASFTEDVAFSDFDHTGRAKYHPFIDSIYDQTQFGMSWRLINLLLIKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEIANWVDHCMDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGVYDALMDTNKTPHLEEV 945
            VRLNNKQRLGILACACAAGVAATFGSVFGGTLFSVEVTATAYMVDTLPATFLCAVVVAVVFW+SGQG+LFALI DNT QAQGFTATDL+AWAVLGAVCGLVGAWFVAVLDALS RRNFFTRKDLDP TR KRMFVVVALATLLVIPASFTEDVAFS+ D TGR+KYHP IDSIYDQTQFGMSWRLI+LLL+KFW TIFSVVQPLPVGLFSPIFVIGGLMGRIFGE+ANWVDHC DSVNI FQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKG+YDALMDTNKTPHLEEV
Sbjct:   14 VRLNNKQRLGILACACAAGVAATFGSVFGGTLFSVEVTATAYMVDTLPATFLCAVVVAVVFWVSGQGELFALIGDNTEQAQGFTATDLLAWAVLGAVCGLVGAWFVAVLDALSLRRNFFTRKDLDPSTRTKRMFVVVALATLLVIPASFTEDVAFSNVDRTGRSKYHPLIDSIYDQTQFGMSWRLISLLLLKFWATIFSVVQPLPVGLFSPIFVIGGLMGRIFGEVANWVDHCFDSVNIKFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGIYDALMDTNKTPHLEEV 328          
BLAST of mRNA_E_fasciculatus_S2_contig7665.15835.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJI7_ECTSI)

HSP 1 Score: 347 bits (889), Expect = 1.460e-111
Identity = 175/182 (96.15%), Postives = 177/182 (97.25%), Query Frame = 1
Query:  397 MFVVVALATLLVIPASFTEDVAFSDFDHTGRAKYHPFIDSIYDQTQFGMSWRLINLLLIKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEIANWVDHCMDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGVYDALMDTNKTPHLEE 942
            MFVVVALATLLVIPASFTEDVAFS  D  GRAKYHP IDSIYDQTQFGMSWRLI+LLLIKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEIANWVDHC+DSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGVYDALMDTNKTPHLEE
Sbjct:    1 MFVVVALATLLVIPASFTEDVAFS-VDRAGRAKYHPLIDSIYDQTQFGMSWRLISLLLIKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEIANWVDHCLDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGVYDALMDTNKTPHLEE 181          
BLAST of mRNA_E_fasciculatus_S2_contig7665.15835.1 vs.
Match: Chloride (channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU91_9STRA)

HSP 1 Score: 296 bits (759), Expect = 7.700e-91
Identity = 155/312 (49.68%), Postives = 211/312 (67.63%), Query Frame = 1
Query:    1 VRLNNKQRLGILACACAAGVAATFGSVFGGTLFSVEVTATAYMVDTLPATFLCAVVVAVVFWLSGQGDLFALISDNTAQAQGFTATDLMAWAVLGAVCGLVGAWFVAVLDALSRRRNFFTRKDLDPYTRRKRMFVVVALATLLVIPASFTEDVAFSDFDHTGRAKYHPFIDSIYDQTQFGMSWRLINLLLIKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEIANWVDHCMDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGVYDALMDTNKTPHL 936
            +R+N   RL IL CACAAGVAA+FGS FG TLFSVE+T+T Y+V  L   F  A VVA+++W  G   +  L SDN +Q   F  TDL+ WA+LG +CGLVG  FV+ +  +S+ RN  TR  L P  +R R  ++ AL T LVIP S+ E   F  +  TG+      +D ++     G+S+ L   + IK    + SV QPLPVGLF+P+F++G   GR+FGE+A + +  M  +++ FQPWEFA+IG+AA S  +TRAVSTA+IVFE+SGEN LRLPLG+A++I++ IA+RFTKG YD+L+DTN  P+L
Sbjct:  206 IRVNAPHRLEILTCACAAGVAASFGSAFGATLFSVEITSTCYIVSGLARAFATATVVALIYWCWGTEVISGLFSDNVSQGMPFAPTDLLLWALLGVLCGLVGWAFVSAISGVSQWRNRITRSALGPKVQRGRRLMICALFTTLVIPLSYWELRYFERWSTTGQKAL---VDHLFAPRVLGVSYELALFVPIKALAILLSVTQPLPVGLFAPVFLLGAAFGRLFGEVARYANLSMGLMHLTFQPWEFAVIGAAALSGSITRAVSTAIIVFEMSGENCLRLPLGLAVLIAHTIASRFTKGAYDSLVDTNSAPYL 514          
BLAST of mRNA_E_fasciculatus_S2_contig7665.15835.1 vs.
Match: Chloride (channel protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UA92_9STRA)

HSP 1 Score: 271 bits (694), Expect = 4.660e-80
Identity = 157/315 (49.84%), Postives = 208/315 (66.03%), Query Frame = 1
Query:    4 RLNNKQRLGILACACAAGVAATFGSVFGGTLFSVEVTATAYMVDTLPATFLCAVVVAVVFWLSGQGDLFALISDNTAQAQGFTATDLMAWAVLGAVCGLVGAWFVAVLDALSRRRNFFTRKDLD-PYTRRKRMFVVVALATLLVIPASFTEDVAFSDFDHTGRAKYHPFIDSIYDQTQFGMSWRLINLLLIKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEIANWVDHCMDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGVYDALMDTNKTPHLEEV 945
            R N  +RL IL CA AAGVA+TFG+ FGG LFS+EVTAT YMV  LP  F CA+  A+V+ ++G  D FAL +D+  + QG+   DL+    LG +CGL GA FV V+ AL   RN +    L  P   R+R+++V+A A L+V P  + + V+       G  +  P  D ++     G+S  L    + KF  T   V  PLPVGLF+P FV GG +GR+FGEI ++  +  D +  + +PWEFA+IG+AAFS+GVTRAVSTAVIVFELSG+NHLRLP+ VAL+++YF+ANRFTK VYD L+DTN TP L E+
Sbjct:  324 RRNTSKRLEILGCASAAGVASTFGTPFGGVLFSIEVTATYYMVRNLPRAFFCAICAALVYEIAGLRDTFALFTDDHDRVQGYLVFDLLLCCGLGLLCGLFGALFVGVISALCSLRNRYLSFSLGWPVVARRRVWMVLATA-LVVAPLIYLDMVSGLP---QGGPRPKPLTDYMFRSGIIGVSGPLALYAVFKFLVTALCVSLPLPVGLFTPTFVTGGAVGRLFGEIVHFF-YPTDRIT-SLEPWEFAVIGAAAFSSGVTRAVSTAVIVFELSGQNHLRLPISVALLLAYFVANRFTKNVYDELLDTNGTPSLPEL 632          
BLAST of mRNA_E_fasciculatus_S2_contig7665.15835.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNS7_9STRA)

HSP 1 Score: 213 bits (542), Expect = 8.990e-59
Identity = 144/387 (37.21%), Postives = 203/387 (52.45%), Query Frame = 1
Query:    1 VRLNNKQRLGILACACAAGVAATFGSVFGGTLFSVEVTATAYMVDTLPATFLCAVVVAVVFWLSGQGDLFALISDNT--------------AQAQGFTATDLMAWAVLGAVCGLVGAWFVAVLDALSRRRNFF-----------TRKDLDP----------------------YTRRKRMFVVVALATLLVIPASFTEDVAFSDFDHTGRAKYHPFIDSIYD----QTQFGMSWRLINLLLI--KFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEIAN----------WVDHCMDSVNI---------NFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGVYDALMDTNKTPHLEEV 945
            V +N  +RL IL  ACA GVAA+FG+ FGG +FS+E+TA+ Y +  LP    C +  A+    +G   L ++   +T               + + +T  DL A+ +LGA+CGL+G  FV ++ +L+ RRN F           T+ D +P                      +T   R  ++V  ATLLV P  F ED+          A+  P  D++ D    +T      R      +  KF TTI SVV PLPVG+F P FV G  +GR  GE+ +          W+D   D  N           F PWE+A+IG+AAF+AGVTRA+STAVI  EL+GENHLR+PL ++ ++++FI NRFTK +YDAL+DTN TP L ++
Sbjct:  179 VAINQAKRLDILGAACATGVAASFGTPFGGAIFSIEITASTYNIHMLPQALWCCLAGALALQSAGLDSLTSIFDPDTNFDPNYVHTTQTHNLKKENWTRLDLFAFVLLGALCGLLGCIFVWLVSSLAARRNEFLAKIPDTSEILTKNDHNPIIKNFLPKKMYTCFFSMYRALYFTHLGRKLLLVVSATLLVAPLVF-EDLMTG---LAATAEESPNADNVLDVLFAKTPMNTDERTKVFWFVPYKFVTTIISVVLPLPVGVFKPTFVCGAAIGRAIGEVLHSLAANYADRKWIDSLTDVDNTAHSTMPIITQFMPWEYAVIGAAAFAAGVTRALSTAVIFLELAGENHLRIPLLLSTLVAHFIGNRFTKPIYDALIDTNGTPTLPDL 561          
BLAST of mRNA_E_fasciculatus_S2_contig7665.15835.1 vs.
Match: Aste57867_178 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K740_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.200e-56
Identity = 134/324 (41.36%), Postives = 195/324 (60.19%), Query Frame = 1
Query:   10 NNKQRLGILACACAAGVAATFGSVFGGTLFSVEVTATAYMVDTLPATFLCAVVVAVVFWL---SGQGDLF----ALISDNTAQAQGFTATDLMAWAVLGAVCGLVGAWFVAVLDALSRRRNFFTRKDLDPYTRRKRMFVVVALATLLVIPASFTEDVAFSDFDHTGRAKYHPFIDSIYDQTQFG-----MSWRLINLLLIKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEIANWVDHCMDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGVYDALMDTNKTPHLEEV 945
            ++ +RL +LACACAAGVAATFG+ FGG LFSVEVT++ YMV  LP +F  A+  AV       +GQ  LF     L   +T   + FT  D   +  +G V G++GA F+ ++  L R R+ +      P    KR+ VVV   T++   +SF  D A+  F H G  +    ID+++ Q+        ++  L+  L +K++ TI  VV PLP GLF+P FVIGG+ GR+ GE A  V  C   V+  F+P+EFA+IG+AAFS GVTRA+STAVI+ E+S   +L +P+ +A++ +YF   RF + VYD L+ T + P L+++
Sbjct:  260 DSSKRLEMLACACAAGVAATFGTPFGGVLFSVEVTSSFYMVRNLPRSFFAALAGAVTISFLVTNGQYGLFDRSAGLGLTDTNFTKVFTYIDACIFIFIGTVSGVLGAVFIFIVSMLVRLRDSWFLSTRGPPLLYKRLIVVV-FVTIIANVSSFYGDPAW--FLHHGSPQ--KIIDTLFTQSATREDGAILARSLLTFLPLKYFLTIICVVVPLPAGLFTPTFVIGGIFGRMVGE-AIVVTQC---VSTKFEPFEFAIIGAAAFSTGVTRAISTAVIIMEISHNGYLTIPVSIAILAAYFTGGRFIENVYDVLISTARLPRLKKL 574          
BLAST of mRNA_E_fasciculatus_S2_contig7665.15835.1 vs.
Match: Chloride (Channel (ClC) Family n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZBT7_9STRA)

HSP 1 Score: 199 bits (507), Expect = 2.290e-54
Identity = 127/324 (39.20%), Postives = 194/324 (59.88%), Query Frame = 1
Query:   10 NNKQRLGILACACAAGVAATFGSVFGGTLFSVEVTATAYMVDTLPATFLCAVV--VAVVFWLS-GQGDLF----ALISDNTAQAQGFTATDLMAWAVLGAVCGLVGAWFVAVLDALSRRRNFFTRKDLDPYTRRKRMFVVVALATLLVIPASFTEDVAFSDFDHTGRAKYHPFIDSIYDQTQF-----GMSWRLINLLLIKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEIANWVDHCMDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGVYDALMDTNKTPHLEEV 945
            ++ +RL +LACACAAGVAATFG+ FGG LF+VEVT++ YMV  LP +F  A+   + + F ++ G+  LF     L    T   + FT+ D+  +  +G VCG++GA F+ V+  L R R+ +      P    KR+ +VV L TL+     F  D A+  F H G  +    I++++ +         ++  LI    +K+  T+  VV PLP G+F+P FVIGG+ GR+ GE         + V  NF+P+EFA+IG+AAFS GVTRA+STAVI+ E+S   +L +P+ +A++ +YF   RF + VYD L+ T++ P L+++
Sbjct:  308 DSAKRLEMLACACAAGVAATFGTPFGGVLFAVEVTSSFYMVRNLPRSFFAALAGSITISFLMTNGKYGLFDRSAGLGLTETDFTREFTSVDMCIFVFIGVVCGILGAVFIFVISMLVRARDRWFLSSRGPPLLYKRLGIVV-LVTLIANIFDFYGDPAW--FLHHGSPQ--TIINTLFTKAPSREEGADLARSLITFFPLKYILTMICVVVPLPAGVFTPTFVIGGIFGRMIGEAIQ----VTEVVATNFEPFEFAIIGAAAFSTGVTRAISTAVIIMEVSHNGYLTIPVSIAILAAYFTGGRFIENVYDVLITTSRLPRLQKL 622          
BLAST of mRNA_E_fasciculatus_S2_contig7665.15835.1 vs.
Match: Chloride (channel protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8X4_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.940e-53
Identity = 127/321 (39.56%), Postives = 193/321 (60.12%), Query Frame = 1
Query:   10 NNKQRLGILACACAAGVAATFGSVFGGTLFSVEVTATAYMVDTLPATFLCAVV--VAVVFWLS-GQGDLF----ALISDNTAQAQGFTATDLMAWAVLGAVCGLVGAWFVAVLDALSRRRNFFTRKDLDPYTRRKRMFVVVALATLLVIPASFTEDVAFSDFDHTGRAKYHPFIDSIYDQTQFG-----MSWRLINLLLIKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEIANWVDHCMDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGVYDALMDTNKTPHL 936
            ++ +RL +L+CACAAGVAATFG+ FGG LFSVEVT++ YMV  LP +F  A+   V + F ++ GQ  LF     L   +T   + FT  D   +  +G V G++GA F++++  L R R+ +      P    KR+ +VV + T++   ++F  D A+  F H G  +    ID+++ Q+        ++  L+  L +K++ TI  VV PLP G+F+P FVIGG+ GR+ GE           V   F+P+EFA+IG+AAFSAGVTRA+STAVI+ E+S   +L +P+ ++++ +YF   RF + VYD L+ T + P L
Sbjct:  260 DSSKRLEMLSCACAAGVAATFGTPFGGVLFSVEVTSSFYMVRNLPRSFFAALAGAVTIAFLVTDGQYGLFDRSAGLGITDTNFTKVFTYVDAGIFVFIGVVSGVLGAVFISIISVLVRVRDSWFLSLGGPPLLYKRL-IVVLVVTIIANVSNFYGDPAW--FLHRGSPQ--KIIDTLFTQSPTREDGALLARSLLTFLPLKYFLTIVCVVVPLPAGIFTPTFVIGGIFGRLVGEAIVVTQF----VPTKFEPYEFAIIGAAAFSAGVTRAISTAVIIMEISHNGYLTIPVSISILAAYFTGGRFVENVYDVLISTARLPRL 571          
BLAST of mRNA_E_fasciculatus_S2_contig7665.15835.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XN57_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.770e-52
Identity = 134/358 (37.43%), Postives = 191/358 (53.35%), Query Frame = 1
Query:    4 RLNNKQ--RLGILACACAAGVAATFGSVFGGTLFSVEVTATAYMVDTLPATFLCAVVVAVV---------FWLSGQGDL-FALISDNTAQAQGFTATDLMAWAVLGAVCGLVGAWFVAVLDALSRRRNFFTRKDLDPYTRRKRMFVVVALATLLVIPASFTEDVAFSDF-----------------------------DHTGRAKYHPFIDSIYDQTQFG---MSWRLINLLLIKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEIANWVDHCMDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGVYDALMDTNKTPHLEEV 945
            R+NN +  RL +LACACAAGVAATFGS FGG LF VEVT+  YMV TLP +F  A++ A++         + L G   L  A +SD  A    F+  DL+ + ++G  CGL GA F   +  L R R+ F    + P     R  ++  L   L +  + T    F +F                               TG A  H       ++T+     +S  LI  L +K+  T+ SVV P+P GLF+P FVIGG+ GR+ GE  N      +     ++P+EFA+IG+ AFS+GVT A+STAVI+ E+S  + L LP+ VA++ SYF A RF++ VYD L+ T++ P L+++
Sbjct:  248 RINNDETKRLEMLACACAAGVAATFGSPFGGVLFGVEVTSHFYMVRTLPRSFFAAIIGALLVNFVTANARYGLFGSSSLGIADVSDLHA----FSLRDLVVFTLIGVTCGLGGALFNRCIAVLVRARDHFFALPVPPRAGALRRLLMSGLGKRLALVLAITFLSCFLEFYGDSAWFIRHGSPRRILGALFSDKRPFVGGATGPAHAHATAAPPGEETEEDSALLSRSLITYLPLKYMLTLVSVVLPIPAGLFTPTFVIGGIYGRLVGEAIN----AFELFETPYEPFEFAIIGAGAFSSGVTHAISTAVIIMEISHNDGLNLPVSVAILASYFTAKRFSENVYDMLITTSRLPRLQKL 597          
BLAST of mRNA_E_fasciculatus_S2_contig7665.15835.1 vs.
Match: Chloride (channel protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UTU7_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.880e-52
Identity = 128/324 (39.51%), Postives = 192/324 (59.26%), Query Frame = 1
Query:   10 NNKQRLGILACACAAGVAATFGSVFGGTLFSVEVTATAYMVDTLPATFLCAVVVAVVFWL---SGQGDLF----ALISDNTAQAQGFTATDLMAWAVLGAVCGLVGAWFVAVLDALSRRRNFFTRKDLDPYTRRKRMFVVVALATLLVIPASFTEDVAFSDFDHTGRAKYHPFIDSIYDQTQFG-----MSWRLINLLLIKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEIANWVDHCMDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGVYDALMDTNKTPHLEEV 945
            ++ +RL +L+CACAAGVAATFG+ FGG LFSVEVTA+ YMV  LP +F  A+  AV       +GQ  LF     L    T   + FT  D   +  +G V G++GA F+ ++  L R R+ +      P    KR+ +VV + T++   + F  D A+  F H G  +    ID+++ Q+        ++  L+  L +K++ TI  VV PLP G+F+P FVIGG+ GR+ GE           V   F+P+EFA+IG+AAFS+GVTRA+STAVI+ E+S   +L +P+ +A++ +YF   RF + VYD L+ T++ P L+++
Sbjct:  260 DSSKRLEMLSCACAAGVAATFGTPFGGVLFSVEVTASFYMVRNLPRSFFAALAGAVTIAFLVTNGQYGLFDRSAGLGLTETNFTKVFTYIDGGIFVFIGVVSGVLGAVFIWIISVLVRVRDTWFLSLSGPPLLYKRI-IVVLVVTVIANISYFYGDPAW--FLHHGSPQ--KIIDTLFTQSPTREDGAMLARSLLTFLPLKYFMTIVCVVVPLPAGIFTPTFVIGGIFGRLVGEAIV----VTQVVPTKFEPYEFAIIGAAAFSSGVTRAISTAVIIMEISHNGYLTIPVSIAILSAYFTGGRFIENVYDVLITTSRLPRLKKL 574          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7665.15835.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized3.180e-20293.65protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.460e-11196.15protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Chloride7.700e-9149.68channel n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Chloride4.660e-8049.84channel protein n=2 Tax=Monodopsidaceae TaxID=4250... [more]
Hypothetical8.990e-5937.21protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
Aste57867_1782.200e-5641.36protein n=1 Tax=Aphanomyces stellatus TaxID=120398... [more]
Chloride2.290e-5439.20Channel (ClC) Family n=1 Tax=Achlya hypogyna TaxID... [more]
Chloride1.940e-5339.56channel protein n=7 Tax=Aphanomyces astaci TaxID=1... [more]
Uncharacterized1.770e-5237.43protein n=1 Tax=Pythium brassicum TaxID=1485010 Re... [more]
Chloride1.880e-5239.51channel protein n=3 Tax=Aphanomyces invadans TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7665contigE_fasciculatus_S2_contig7665:971..6271 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score345.9
Seed ortholog evalue2e-92
Seed eggNOG ortholog2880.D8LJI7
Model size963
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0005215,GO:0005216,GO:0005244,GO:0005247,GO:0005253,GO:0005254,GO:0006810,GO:0006811,GO:0006820,GO:0006821,GO:0008150,GO:0008308,GO:0008509,GO:0015075,GO:0015103,GO:0015108,GO:0015267,GO:0015318,GO:0015698,GO:0022803,GO:0022832,GO:0022836,GO:0022838,GO:0022839,GO:0022857,GO:0034220,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0098660,GO:0098661,GO:1902476
Exons7
EggNOG free text desc.voltage-gated chloride channel activity
EggNOG OGsCOG0038@1,KOG0476@2759
Cds size963
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7665.15835.1prot_E_fasciculatus_S2_contig7665.15835.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7665 971..6271 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842428.887382-CDS-E_fasciculatus_S2_contig7665:970..10261696842428.887382-CDS-E_fasciculatus_S2_contig7665:970..1026Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7665 971..1026 +
1696842428.8976002-CDS-E_fasciculatus_S2_contig7665:1606..17921696842428.8976002-CDS-E_fasciculatus_S2_contig7665:1606..1792Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7665 1607..1792 +
1696842428.9105227-CDS-E_fasciculatus_S2_contig7665:2425..25861696842428.9105227-CDS-E_fasciculatus_S2_contig7665:2425..2586Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7665 2426..2586 +
1696842428.9243636-CDS-E_fasciculatus_S2_contig7665:3065..31921696842428.9243636-CDS-E_fasciculatus_S2_contig7665:3065..3192Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7665 3066..3192 +
1696842428.9334087-CDS-E_fasciculatus_S2_contig7665:3879..39641696842428.9334087-CDS-E_fasciculatus_S2_contig7665:3879..3964Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7665 3880..3964 +
1696842428.942375-CDS-E_fasciculatus_S2_contig7665:5077..51881696842428.942375-CDS-E_fasciculatus_S2_contig7665:5077..5188Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7665 5078..5188 +
1696842428.9564998-CDS-E_fasciculatus_S2_contig7665:6034..62711696842428.9564998-CDS-E_fasciculatus_S2_contig7665:6034..6271Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7665 6035..6271 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7665.15835.1

>prot_E_fasciculatus_S2_contig7665.15835.1 ID=prot_E_fasciculatus_S2_contig7665.15835.1|Name=mRNA_E_fasciculatus_S2_contig7665.15835.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=321bp
VRLNNKQRLGILACACAAGVAATFGSVFGGTLFSVEVTATAYMVDTLPAT
FLCAVVVAVVFWLSGQGDLFALISDNTAQAQGFTATDLMAWAVLGAVCGL
VGAWFVAVLDALSRRRNFFTRKDLDPYTRRKRMFVVVALATLLVIPASFT
EDVAFSDFDHTGRAKYHPFIDSIYDQTQFGMSWRLINLLLIKFWTTIFSV
VQPLPVGLFSPIFVIGGLMGRIFGEIANWVDHCMDSVNINFQPWEFALIG
SAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGVY
DALMDTNKTPHLEEVSSLFF*
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mRNA from alignment at E_fasciculatus_S2_contig7665:971..6271+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7665.15835.1 ID=mRNA_E_fasciculatus_S2_contig7665.15835.1|Name=mRNA_E_fasciculatus_S2_contig7665.15835.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5301bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7665:971..6271+ (Ectocarpus fasciculatus EfasUO2)
GTGCGGCTGAACAACAAGCAGAGGCTGGGCATCCTGGCCTGCGCGTGCGC TGCGGGGTGCGTCACTCGAATGATTTCATTCACCGTGCCTCGTTTTGTTT TTCATTGGTTCGTTCATGTGCCCGGTTTTGCTCTTTTCTTTTTTCGTTGT CTAGGCTGCGTCGCGCTGATGTGTGTGTGCGTGTGTGTGTGTGTGTCTTG CTTGCTAACATCGACCATGCTAACCGGCTGACCAATGAAAAAACGCCAGT CTCAGCGCGGTTACACACGCAAAGTGCCTCTAAGGCCACGATGTGGGACC CTGTGACCGAGCGTCATGGGGGAGTCTACGCTACTCTCGAGATTAAAGAC AGATACCTTGTAGCAAGAACAGAAGAACGTGTGTGTTGTGCGGTCGCCAT GCGGTTTGACATCTGTGGGAATGTGAAGGCTTCACTTTTGAGGCACGTCG TTGTCGGCTCTTTCCGCTTGTCCAATCCTTGTTGCTGTTTTTGCGTTTTT ACTCATTTTCCCGGTTGTTCTTCTTTGCTCCCTGTCTCTCTGTCTTTTTT AAGAAAATATGCACATGCATACAATCACAGAAAAGACATCCAGCCCGAGA TACTTGCGTTGGCGTTTTTTTTTTTTTTTTTTTCAGGGTGGCCGCGACGT TCGGCTCCGTGTTCGGCGGCACCCTCTTCAGCGTGGAGGTTACGGCCACC GCCTACATGGTCGACACCCTCCCGGCGACCTTCCTCTGCGCCGTGGTGGT GGCGGTCGTCTTCTGGTTGTCCGGACAGGGCGACCTGTTCGCTCTCATCA GCGATAACACGGCACAGGCTCAGTGAGTTAGCTCCTTGCCCTGACCTCAG TGAGTTCGTCGTCTGTTTGAGTGAGTGATTGCGTGTGCGTGTGCGTGTGA TCGATGTGTGTAGGACCAAGTGTGTGCTGAGTGGAAAGTGTACGTGCTGT ATGTGTGTTGAGCGTGAGCGAATGTGTGTGGAACTACATGAAGACTGTAC GTGTAGAAAATGTGTGTCGAGTGTGAGTGGATGTGTTGGACTAGGTTTCG TGCTCGTGAGTGAGGTTGTGGCTGTGTTTTCTCGTTGTGGAAATCGACCG CGCGAACCGGCTGGCCAATCAAGAGGCATCCATCTCAAGGGCGGCTGAAA ACGTGAGGTGTAACGTGAAGGGGTGTGTGTGTGTGCTTGTAGGTCGAAGG TTGTTTTCAGTTTATTGTTTTGTTGGCATCGACCGCGCGCGCTAACCGGC TGGCCGACGAAAAGACTTGGGGCCTCAGTACGGCTGCACACAGAACAATC TTCTGCCAAGACTTTGATCCGCGGGGCCCCCCATGAGGGAAGCATCATGC ATGCGTTTGTGTGTATGAGTTTGTGCTTGCACGCGTGTGAGTGTGTGACG AAGGTTGGTGCCTGTAAGTGACCCCCCCCCCCTCCCCTCACGTCGTTGCT TGCAGGGGCTTCACCGCAACCGATCTCATGGCGTGGGCGGTGCTGGGGGC GGTGTGCGGGCTCGTCGGCGCGTGGTTCGTGGCCGTGTTGGACGCCCTGT CTCGGAGGCGGAACTTCTTCACTCGCAAGGACCTCGATCCCTATACCCGG AGGAAGCGGATGTTCGGTGAGCGCGCGCGAGTGGCGTCGTCGTTTCGGTT TTTGTCGTTGTTATCGATGGTGGGGGGGGGGGGGGTTGATGATGTGTTTT TCTACCGGATGGATTCAAAGCCCGTTTTTCAGCTTGAGACACACCCATGT TGCTGTTGGTGGTGGGGCTGGGTGCTGGTGTGGGGGTTGATGATGTATTT TCCTACAGCTTTTATCCTAGCCGTTGCGGGGTGGACGTAATGTAATGTCC GTATTCAGCACGAGATGCACCCTCGTTGTTGACGTGTGTAGTCCGTGTTC AGATGGGACGCACCCATTGTCGTTGCTGTTGGTGTTAATGTTGTTGGTGT GTTGTTGTTGTTGTTGTTGTTGGTAGTAGGAATGGTCCGCTCCCTCACGG TAGTAGTGGCGAGCCCGCTCATTACCGACTCTCTGAAACCGTCAACCATA ACATAGCTCCCATCCCTTCTTGCTGGCTACCCTTGGTGGTCGCAGTCGTT GTGGCCTTGGCGACGCTGTTGGTGATCCCGGCCTCCTTCACGGAGGATGT GGCTTTCAGCGACTTCGACCACACGGGAAGGGCCAAGTACCACCCCTTCA TAGACAGCATCTACGACCAAACGTGAGCTGCGTACTCGTACTTATGCATG CGATCACAAAGAGTAAAGAGTATGGCAGATCGATGTACCCACCCCTTAAT CTGCGGCATCTGCGACCGAGCTGTGTAAGTCTGTGCGTACAACCACCAAA CGTAAGGCGCACCGAACTGCCATCCCTTGATCTACGGGATCTACGGCCAA GAGTGAGCTGTAGGTCTATTGTATGCATGAGACCAGCGAAATGGCAAGCG GACCCAGAATGCCAAGGGCGGTATCTTACCACCCCCTGATCGACAGGAAT CACGACCAAACGTGAGCTGTGTAGGTCTAAGCATACGGCCACCAAAATGG AAGGCGGACTGAGTTGGATCTACGATGCACAGCATGGCAGATCTCCGAAC GTGTAGTCGAGCCAGGCCTTGAACAAACGGTTTTGGGAACGACCGAAATT TGGGCCATATTCTTCATGCCCGGCGCTTTGCCGGATGTACCATCGGTCCG ACTTCTGAGCCATAAAATTACCAAAGGAAGGTAGGTCTACAATCAGAACA GTTATTTATCTGGACCCCGGAACGATTGGCAATCGGTGATCGGTTCTTTT TCGCAACATTTTTCCGTCCTCTCGAGGACGGAGCGTGGTCGATGGCCTAA CAGCTGAGGAATGCGAAACACGAACACCACCCCACGAACATTTTTTTCCG CTCCCGCAGGCAGTTCGGGATGTCTTGGCGCCTCATCAACCTGTTGCTGA TCAAGTTCTGGACGACGATATTTTCCGTGGTTCAGCCCCTGCCGGTGAGA TGGTGTATTCCTTCCGCGTTGCTTGCTATTGTTCACCTGGGCTGTTGTTG TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCCCTCCCCCCTCGTTTGGG GTTGATGTGCCATGTGCCTTGTTTGCATTGCTTTAGGGGCAAAGAGCTGC TGTTGTCTATGTTGTCTATGTTGTCGTTTTCCTTCCACGTTACTTGCTGT TTTTTCTCTTGGTCGTGTCGGTGCGTGGCGGTTCTTGTTGTCCTCGCTCC CCCCTCTTTTCGGATTTGTTTCACCTTGTTTGCATTGCCTTTGGGGCAAA GCTGCTGTTGTCTTGTCTATATGCTGTTGCCCTTTGCCGGTGGGATGGCA TGCCACTTGCTGTTGTTCTCCTGGTCGTCTTGGTGCATTGGCGTTTTTGT TGTCGTCGTTCCCCCCTCCTTTCGGATTTGGTTTGCCTTGTTTGGATTGC TGTAGGGGCAAAGCTGGTATTGTCGATTAGGACGTCCGTCCCCTATGAGA AGGGGTCGAAAGTGAAAGCACTCTCCTCATCGCCAAGCACGAACATGACA TGCAAACAGATAGGAAACTACTTGTTAGACGTCTATCTCATGAAACAAGG GTGCCTGTTCCCTGAACGAGCCCCATCTCCCTGACGTTTCGCCCCCGACC CTCACGGAATGTACATCCTCACAAGAAGCCCCTTCAATCCACGCCTCACG GGATTCCATCCTCACAAAAAGCCCCTTCGATCCACGCAGCACCCTCCCTC AATTCTGATACAAGTAGCCTGTAGTATGAGTGGAAAATTACCTTCTCTGG GTTCCAACCACTTCTCTCTTCTTCTCGAGTTTTTGGGTAGACGGGCTCTG CCACCCCCGTACCCTCTTTAATGGCCCCGGCGTGTTGTCGGCGTTGTTGT TGTTCCTGCTGCTGTTTTTCTTTCCTCTTTTTTCCCACACCGGTCTGCAT TTTATTCTTACAACATACTCGTCGGATTTTTTGTTTTCTGTTTGTTTTTC TTCTGGTCTGCCCTCTTCTTTGACACGGAATCGGATTATTATTTTTTTTT ATTTTTTCCTCTATTTTTTCTGGCCTGCTCTCTTCTTCTCCTTTGACGCG GAACCAGGTCGGGCTGTTCAGCCCAATCTTCGTCATCGGCGGCCTGATGG GGAGAATCTTCGGAGAGATTGCCAACTGGGTGGACCATTGCATGGACAGC GTCAACATCAACTTCCAGGTGAGCTGCTGTTGCGTGTGTCTATCGCAACT TTGGCAGTCTGGGGGTGTAAGCTTGATGTTGTAGGTAGGGGTTAGGGTTA GGGGTAGGGATACGAAACGTTCCTCTCTGTTTCACAGACAAGCATTACAG TAAGGAGGCGGTCCTCCAACTTTGGAGAGGTTTCCTGATATGCTCTCTGC ATTTTGGAGGCCGCACACGTGTAGCAGACGTCTGTTGAAATAGATGGCAT GAACGTATCAGGCGTGCTTGAGTCGTGCCAGTGGTTGTAAGGAAAACCTG CCCGTCAACTCCCCCATCCACTTGGTGCAGTCTGCTTGGGTAGCAGCAGC TGCCGCCGCGTCGTAGCCTGTTCGGCCCGATAGTGTCGTGACGGCCCCAA AGCCCTTAGAGCGAGGCTAGCCATTGTGTGGCCACTGACACGTGCCACTC GGTGCCAGATCCCCTCCCCCCCGCCCTTTCGGTGGTTGTCACGTCACTCC CAACGCCTCTCTCTCCCCGCCCACCTTGCGACGGCACGTTAAACAGTAGT CATGGTTTACTGTGGTTCAACTCAAGTGTTTGTCATTTCAACAAAGCAGC ATTTTCACTACCCCGGCCTTTCCTATAGGATGGATAGGATGAAGGTAAAA AAAATTGAACCACTTTTGGCAAATTAGGAAGGAACGGTTGGCCATCGGTA ATCGGTGATGTGCGGCGCGTGGTCAACGGTCTAACTTCTACGGCATGCGT TTACATTAGTACCCCCCGGTACCCCTTGTTGTGAGGGGGAGTGCTAGTCG TCATTTTACGTCTCGCAACTTGACCCAAACACCCCCACCTCCCCGTGGAA AAAAAAAATGGCAGCCTTGGGAATTCGCCCTAATCGGTTCTGCGGCGTTC TCGGCGGGGGTGACGCGAGCAGTCAGCACGGCGGTTATCGTGTTCGAGCT GTCAGGCGAGAACCACCTCCGCCTGCCGCTGGGCGTGGCCCTGATGATAT CGTACTTCATCGCGAACCGCTTCACGAAGGGCGTCTACGACGCCCTCATG GATACCAACAAAACCCCTCACTTGGAAGAGGTGAGCAGCCTCTTTTTTTA G
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7665:971..6271+

>mRNA_E_fasciculatus_S2_contig7665.15835.1 ID=mRNA_E_fasciculatus_S2_contig7665.15835.1|Name=mRNA_E_fasciculatus_S2_contig7665.15835.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=963bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7665:971..6271+ (Ectocarpus fasciculatus EfasUO2)
GTGCGGCTGAACAACAAGCAGAGGCTGGGCATCCTGGCCTGCGCGTGCGC
TGCGGGGGTGGCCGCGACGTTCGGCTCCGTGTTCGGCGGCACCCTCTTCA
GCGTGGAGGTTACGGCCACCGCCTACATGGTCGACACCCTCCCGGCGACC
TTCCTCTGCGCCGTGGTGGTGGCGGTCGTCTTCTGGTTGTCCGGACAGGG
CGACCTGTTCGCTCTCATCAGCGATAACACGGCACAGGCTCAGGGCTTCA
CCGCAACCGATCTCATGGCGTGGGCGGTGCTGGGGGCGGTGTGCGGGCTC
GTCGGCGCGTGGTTCGTGGCCGTGTTGGACGCCCTGTCTCGGAGGCGGAA
CTTCTTCACTCGCAAGGACCTCGATCCCTATACCCGGAGGAAGCGGATGT
TCGTCGTTGTGGCCTTGGCGACGCTGTTGGTGATCCCGGCCTCCTTCACG
GAGGATGTGGCTTTCAGCGACTTCGACCACACGGGAAGGGCCAAGTACCA
CCCCTTCATAGACAGCATCTACGACCAAACGCAGTTCGGGATGTCTTGGC
GCCTCATCAACCTGTTGCTGATCAAGTTCTGGACGACGATATTTTCCGTG
GTTCAGCCCCTGCCGGTCGGGCTGTTCAGCCCAATCTTCGTCATCGGCGG
CCTGATGGGGAGAATCTTCGGAGAGATTGCCAACTGGGTGGACCATTGCA
TGGACAGCGTCAACATCAACTTCCAGCCTTGGGAATTCGCCCTAATCGGT
TCTGCGGCGTTCTCGGCGGGGGTGACGCGAGCAGTCAGCACGGCGGTTAT
CGTGTTCGAGCTGTCAGGCGAGAACCACCTCCGCCTGCCGCTGGGCGTGG
CCCTGATGATATCGTACTTCATCGCGAACCGCTTCACGAAGGGCGTCTAC
GACGCCCTCATGGATACCAACAAAACCCCTCACTTGGAAGAGGTGAGCAG
CCTCTTTTTTTAG
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