mRNA_E_fasciculatus_S2_contig746.15630.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig746.15630.1
Unique NamemRNA_E_fasciculatus_S2_contig746.15630.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig746.15630.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH9_ECTSI)

HSP 1 Score: 429 bits (1102), Expect = 1.320e-143
Identity = 213/321 (66.36%), Postives = 260/321 (81.00%), Query Frame = 1
Query:    1 FGTKVVVLAGDTRQLAPVVVNGAEADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDGVSPVDEEGFTTISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIPDVCHTLEGRTLLDHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFKFVTWQGVAVKRVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRIDDNGFARVHNVVFMSLL 963
            F  KVVVLAGDTRQL PVV NG EA+T AASVLSS+YYR  V++F L+KTMRN++DP +SKMVDDIGDGVS +DE G  TI+GV+TE+ L+ +IDFVFP +VL++P ACAKR +IS H D+V  +N  VL R+    +TL+GRT+LDH+HL+ D DD F MS +L+ ++  G+P+H I L  GVVVMLCRNLSIDD LTNG+KV+V+ I  +TL+++TLD G + WLPRI F FVT QGVAVKRVQFPVRLCF +TVHRAQGQTLD+ C DL+RHPFAHGH+YVGLSRVRKS D+II TT DRID + FA+VHNVVF SLL
Sbjct:  328 FPGKVVVLAGDTRQLPPVVPNGGEAETTAASVLSSAYYRDNVEIFHLSKTMRNKDDPRYSKMVDDIGDGVSDIDEAGLITITGVRTEEALDVAIDFVFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARVNGETYTLQGRTMLDHKHLDPDVDDFFRMSQFLNQMEHSGVPSHDINLNVGVVVMLCRNLSIDDCLTNGTKVVVVAIQPFTLKLQTLDHGKMFWLPRIAFNFVTDQGVAVKRVQFPVRLCFCLTVHRAQGQTLDKTCIDLTRHPFAHGHLYVGLSRVRKSDDIIILTTSDRIDGDVFAKVHNVVFKSLL 648          
BLAST of mRNA_E_fasciculatus_S2_contig746.15630.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSD8_9PHAE)

HSP 1 Score: 361 bits (927), Expect = 3.240e-118
Identity = 188/325 (57.85%), Postives = 233/325 (71.69%), Query Frame = 1
Query:    1 FGTKVVVLAGDTRQLAPVVVNGAEADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDGVSPVDEEGFTTISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIPDVCHTLEGRTLLDHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFKFVTWQGVAVKRVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRIDDNGFARVHNVVFMSLLPAVE 975
            F  KV V+AGDTRQL PVV NG E++T AASVLSS++YR  V VF L  TMRN++DP FSKMVD IGDG +PVD +G  T++GV T   LE +IDFVFP  VL++P ACAKR +IS H D+V  +N  VL+R+     TL GRT+LDHE ++ D+                GIP+H I+LK GVVV LCRN+SID +LTNG+KV+V +I +YTL+VK L DG                 VAVKR+ FPVRL F +TVHRAQGQTLD+ CFDL+RHPFAHGH+YVGLSRVRK+ D+II TTPDR++D GFA+V+NV++ SLLP VE
Sbjct:  283 FPKKVFVIAGDTRQLPPVVANGGESETTAASVLSSAFYRDNVDVFHLNTTMRNKDDPDFSKMVDAIGDGEAPVDADGLVTMTGVDTALSLESAIDFVFPYYVLQNPTACAKRGIISTHNDSVARVNAAVLSRVQGDMFTLRGRTMLDHEQMDPDS----------------GIPSHEIKLKVGVVVRLCRNMSIDARLTNGTKVVVQEIQSYTLRVKNLKDG-----------------VAVKRIHFPVRLWFCLTVHRAQGQTLDKTCFDLTRHPFAHGHLYVGLSRVRKADDVIILTTPDRVNDYGFAKVNNVLYNSLLPVVE 574          
BLAST of mRNA_E_fasciculatus_S2_contig746.15630.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRZ0_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 4.580e-57
Identity = 95/160 (59.38%), Postives = 122/160 (76.25%), Query Frame = 1
Query:  151 MRNREDPPFSKMVDDIGDGVSPVDEEGFTTISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIPDVCHTLEGRTLLDHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDIN 630
            MRN++DP FSKMVDDIG+GVS +DE G TTI+GV+TEQ L+  IDF FP +VL++P ACAKR +IS H D+V  +N  VL R+     TL+GRT+LDHEHL+ D DD F MS +L+ ++P  +P+H I LK GVVV+LCRNLSIDD LTNG+KV++   N
Sbjct:    1 MRNKDDPRFSKMVDDIGNGVSDIDEAGLTTITGVRTEQALDVVIDFGFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARMNGETCTLQGRTMLDHEHLDPDVDDFFRMSQFLNQMEPSSVPSHDINLKVGVVVLLCRNLSIDDCLTNGTKVVLSRFN 160          
BLAST of mRNA_E_fasciculatus_S2_contig746.15630.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1TK21_FRAOC)

HSP 1 Score: 186 bits (472), Expect = 1.180e-52
Identity = 123/318 (38.68%), Postives = 165/318 (51.89%), Query Frame = 1
Query:    1 FGTKVVVLAGDTRQLAPVVVNGAEADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDGVSPV-----DEEGFTTISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIPDVCHTLEGRTLL----DHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFKF--VTWQGVAVKRVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRIDDN 921
            FG KVVVL+GD RQLAPVV +       AA+ L SS     ++   LT   R      +   +  +G+G         D  G   +  V +  D    I+FVFP ++L DP  CAKRAV+  H   VDD N ++L  +       EG  ++    D  H E      F   + L      G+P H +R+KKG V M+ RNL+ DD L NGSKV+V+D+    + V+         +PRITFKF  V    + V R QFP+RL +A TVH++QG TLD+V  DL   PFAHG +Y  LSRVR   D+++     RI DN
Sbjct:   38 FGGKVVVLSGDFRQLAPVVPDAKTLAEIAAASLRSSPIFPGLRRMHLTVAHRQAGSDDYVAFLMQVGNGTIAQHTLADDSVGVVGLPLVSSVPDRSNLINFVFPRDLLSDPDECAKRAVLCTHNVDVDDTNHQLLQDV-------EGDEIVCASADFVHAEDLAPGEFIDDELLHQATGKGVPPHMLRIKKGAVCMITRNLNSDDGLVNGSKVIVVDVTPRLVIVRLPGSQERMGIPRITFKFPIVRDSPLVVTRRQFPLRLAYACTVHKSQGLTLDKVAVDLRTDPFAHGLLYTALSRVRSPNDIVVLVQEARIFDN 348          
BLAST of mRNA_E_fasciculatus_S2_contig746.15630.1 vs.
Match: uncharacterized (protein LOC114364057 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103A3A51)

HSP 1 Score: 193 bits (491), Expect = 1.110e-51
Identity = 121/333 (36.34%), Postives = 185/333 (55.56%), Query Frame = 1
Query:    1 FGTKVVVLAGDTRQLAPVVVNG-AEADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDGVSPVDEEGFTT--------ISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIP-DVCHTLEGRTLLDHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFK--FVTWQGVAVKRVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRIDDNGFARVHNVVFMSLL 963
            FG K+V+ AGD RQ+ PVVV   + +D    SV SS  +  ++K+F L+ + RNR+DP +S  +  +G    PV                S +    DL   IDFVF   V+ +P  CA RA+++ H   V +IN  VL R+  ++ H      ++        TD++F  +D L+ LQP G+P H ++LK G V M+ RNLS  D+L NG+KV+V+      + V+   +     +PRI FK        + + R QFP+ LC+A+TVH++QGQT++RV  DL    F+HG +YV L RV++ +D+ I  + D++ DN    ++NVV+  LL
Sbjct:  755 FGGKIVIFAGDFRQIPPVVVRAKSNSDIINCSVKSSPIWE-QIKIFNLSTSQRNRDDPEYSDFLLKLGSNQLPVQTLKVNRSVLNLVDLTSHLSYVTDLNDLIDFVFSHVVIVEPDTCAGRAILTTHNQNVREINSIVLDRVESELLHFYSIDKVVSEN-----TDEIFLGADALNKLQPKGVPEHDLKLKVGCVCMIIRNLSFSDRLVNGTKVIVVKTTPRIIIVRKPGETNEFLIPRILFKAPIEPDSPIEMTRRQFPLALCYAMTVHKSQGQTINRVGVDLRSDVFSHGQLYVALGRVQEKSDIKILVSRDKLIDNKLL-LNNVVYPQLL 1080          
BLAST of mRNA_E_fasciculatus_S2_contig746.15630.1 vs.
Match: ATP-dependent (DNA helicase PIF1-like n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED89BAA)

HSP 1 Score: 186 bits (471), Expect = 1.610e-50
Identity = 116/325 (35.69%), Postives = 181/325 (55.69%), Query Frame = 1
Query:    1 FGTKVVVLAGDTRQLAPVVVNGAEADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDGVSPVDEEG-FTTI--SGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIPDVCHTLEGRTLLDHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFKF-VTWQGVAVKRVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRIDDNGFARVHNVVFMSLL 963
            FG KVVVLAGD RQ+ P++ +G++AD   AS+ SS  +   +K  +L   +R+R+D  +S+ V  +G+   P    G + TI    +     L++ IDFV+P +VL +P  C  RA++S     + +IN  VL  IP     L            G  D+    SD L+ +   G+P H + LK G V +L RN+S +D+L NG+KV+V  I+   ++ +  +      +PRI FKF V+  G+ + R QFP+++ + VT++++QGQTL++V  DL    F+HG +YV L RVR   D+ +  T +R+  N  A   N+V   LL
Sbjct:  260 FGGKVVVLAGDFRQIPPIIPDGSKADIIGASLKSSELWPIIIKK-KLRSILRSRDDRAYSEFVLAVGEDRVPTVAMGEYQTIPLGSISFTTSLQELIDFVYPADVLSNPALCCNRAILSGTNHNISEINRFVLDMIPGEIVRLCSADST--PPCAGAVDNTLIHSDVLNAISHSGVPDHILELKVGCVAILIRNISFEDRLVNGTKVIVEKISRRFIEARIPNATDTVMIPRIPFKFAVSNSGIEMIRKQFPLKVAYGVTINKSQGQTLEKVGVDLRSDVFSHGQLYVALGRVRSVNDVKVLVTENRVS-NDRAHTINIVMKELL 580          
BLAST of mRNA_E_fasciculatus_S2_contig746.15630.1 vs.
Match: ATP-dependent (DNA helicase PIF1-like n=1 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E68D7A0)

HSP 1 Score: 181 bits (459), Expect = 1.840e-50
Identity = 118/332 (35.54%), Postives = 187/332 (56.33%), Query Frame = 1
Query:    1 FGTKVVVLAGDTRQLAPVVVNGAE-ADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDG-VSPVD------EEGFTTISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIP-DVCHTLEGRTLLDHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFKFVTWQGVAVK--RVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRIDDNGFARVHNVVFMSLL 963
            FG K+++ AGD RQ+ PVVV+    +D   ASV SS  ++ ++K F L  + R R+D  FS+ +  +G   ++ V        E    +S +     L+  IDFV+P  +L +P  C  RA++S H  +V +IN ++L  +P D  H       +D E +  + D +F   D L+ +QP GIP H + LK G V M+ RNL+  DKL NG+KV+V++ +   + V+       + +PRI FK     G  ++  R QFP+++C+A+T+H++QGQT+ RV  DL    F+HG +YV LSR +   ++ I  + +R+  NG    +NVV+  LL
Sbjct:   63 FGGKIIIFAGDYRQIPPVVVDAKHNSDVFNASVKSSPIWQ-KLKTFSLVTSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVENLVNLSMISFVSKLDDLIDFVYPNVILTEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYS----ID-EVVSDNADQIFLGVDALNRMQPKGIPEHDLTLKVGCVCMIIRNLNFSDKLVNGTKVIVVNTSPRLITVRKPGLSDDYLIPRIIFKAPVEPGSPIEMCRRQFPLQVCYAMTIHKSQGQTICRVGVDLRSDVFSHGQLYVALSRAQHRQNIKILISEERVI-NGNPLANNVVYPPLL 387          
BLAST of mRNA_E_fasciculatus_S2_contig746.15630.1 vs.
Match: uncharacterized (protein LOC117996074 n=2 Tax=Aphantopus hyperantus TaxID=2795564 RepID=UPI001568188F)

HSP 1 Score: 181 bits (460), Expect = 1.820e-47
Identity = 119/332 (35.84%), Postives = 188/332 (56.63%), Query Frame = 1
Query:    1 FGTKVVVLAGDTRQLAPVVVNG-AEADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDG-VSPVD------EEGFTTISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIP-DVCHTLEGRTLLDHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFK--FVTWQGVAVKRVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRIDDNGFARVHNVVFMSLL 963
            FG K+++ AGD RQ+ PVVV+  + +D   ASV SS  ++ ++K F L  + R R+D  FS+ +  +G   ++ V        E    +S +    +L+  IDFV+P  VL +P  C  RA++S H  +V +IN ++L  +P D  H       +D E +  + D +F   D L+ + P GIP H + LK G V M+ RNL+  DKL NG+KV+V++ +   + V+       + +PRI FK    T   + + R QFP+++C+A+T+H++QGQT+ RV  DL    F+HG +YV LSRV+   ++ I    +R+  NG    +NVV+  LL
Sbjct: 1478 FGGKIIIFAGDYRQIPPVVVHARSNSDVFNASVKSSPIWQ-KLKTFSLITSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVENLINLSIISFVLELDDLIDFVYPNVVLNEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYS----ID-EVVSDNADQIFLGVDALNRMHPKGIPEHDLTLKVGCVCMIMRNLNFSDKLVNGTKVIVVNTSPRLITVRKPGLSDDYLIPRIIFKAPIETGSPIEMCRRQFPLQVCYAMTIHKSQGQTICRVGVDLRSDVFSHGQLYVALSRVQHRQNIKILVNKERVI-NGNPLANNVVYPPLL 1802          
BLAST of mRNA_E_fasciculatus_S2_contig746.15630.1 vs.
Match: uncharacterized (protein LOC123868181 n=2 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E688A66)

HSP 1 Score: 181 bits (458), Expect = 3.110e-47
Identity = 118/332 (35.54%), Postives = 186/332 (56.02%), Query Frame = 1
Query:    1 FGTKVVVLAGDTRQLAPVVVNGAE-ADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDG-VSPVD------EEGFTTISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIP-DVCHTLEGRTLLDHEHLEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFKFVTWQGVAVK--RVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRIDDNGFARVHNVVFMSLL 963
            FG K+++ AGD RQ+ PVVV+    +D   ASV SS  ++ ++K F L  + R R+D  FS+ +  +G   ++ V        E    +S +     L+  IDFV+P  +L +P  C  RA++S H  +V +IN ++L  +P D  H       +D E +  + D +F   D L+ +QP GIP H + LK G V M+ RNL+  DKL NG+KV+V++ +   + V+       + +PRI FK     G  ++  R QFP+++C+A+T+H++QGQT+ RV  DL    F+HG +YV LSR +   ++ I    +R+  NG    +NVV+  LL
Sbjct:  919 FGGKIIIFAGDYRQIPPVVVDAKHNSDVFNASVKSSPIWQ-KLKTFSLVTSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVENLVNLSMISFVSKLDDLIDFVYPNVILTEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYS----ID-EVVSDNADQIFLGVDALNRMQPKGIPEHDLTLKVGCVCMVIRNLNFSDKLVNGTKVIVVNTSPRLITVRKPGLSDDYLIPRIIFKAPVEPGSPIEMCRRQFPLQVCYAMTIHKSQGQTICRVGVDLRSDVFSHGQLYVALSRAQHRQNIKILVNEERVI-NGNPLANNVVYPPLL 1243          
BLAST of mRNA_E_fasciculatus_S2_contig746.15630.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8ZK23_THRPL)

HSP 1 Score: 179 bits (455), Expect = 6.180e-47
Identity = 112/333 (33.63%), Postives = 183/333 (54.95%), Query Frame = 1
Query:    1 FGTKVVVLAGDTRQLAPVVVNGAEADTCAASVLSSSYYRARVKVFRLTKTMRNREDPPFSKMVDDIGDGVSPV-------DEEGFTTISGVQTEQDLEKSIDFVFPLEVLKDPIACAKRAVISLHKDTVDDINDRVLTRIPDVCHTLEG--RTLLDHEHLEGDTDDVFCMSDY-LSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTNGSKVLVMDINAYTLQVKTLDDGTIHWLPRITFKFVTWQG--VAVKRVQFPVRLCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTTPDRIDDNGFARVHNVVFMSLL 963
            FG K+++ +GD RQ+APVV          A  L SS+     KVF+LT   R R    +S+ +  +G+G  P        ++E    +  ++    L + ID ++P  +L +P A A+RA+++     +  IND +L       H+L G    LL ++ ++ + DD F + +  L   +  G+P H ++LK G V  + RNL+I++ L NG+KV+V  ++   ++V+         +PRITFKF    G  + + R QFP++L +A++ H++QGQT+++V  DL    F HG +YVGLSRVR   D+++    DRI D G A   N+V+ +LL
Sbjct:  629 FGGKIILCSGDFRQIAPVVPRARCPSDVVAVSLRSSHLWEFFKVFKLTVPQRTRGSDDYSQYLLHVGNGTLPETTFGEGREQEKLVPLRSLRHMTTLHQLIDEIYPGHILSNPDAAAQRAILATLNTNIRAINDVIL-------HSLHGTLHELLSYDEVDKEADDGFDVDEETLHQTRAKGVPDHILKLKIGAVCFITRNLNIEEGLVNGTKVVVEAVSPRIVRVRKAGGNETFAIPRITFKFPIVDGAPLMINRRQFPLQLAYAMSFHKSQGQTINKVGVDLRTDCFTHGQLYVGLSRVRSPDDIVVLVPHDRIHD-GVAYTKNIVYHNLL 953          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig746.15630.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
ATP-dependent1.320e-14366.36DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
ATP-dependent3.240e-11857.85DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
ATP-dependent4.580e-5759.38DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
ATP-dependent1.180e-5238.68DNA helicase n=1 Tax=Frankliniella occidentalis Ta... [more]
uncharacterized1.110e-5136.34protein LOC114364057 n=1 Tax=Ostrinia furnacalis T... [more]
ATP-dependent1.610e-5035.69DNA helicase PIF1-like n=2 Tax=Ischnura elegans Ta... [more]
ATP-dependent1.840e-5035.54DNA helicase PIF1-like n=1 Tax=Maniola jurtina Tax... [more]
uncharacterized1.820e-4735.84protein LOC117996074 n=2 Tax=Aphantopus hyperantus... [more]
uncharacterized3.110e-4735.54protein LOC123868181 n=2 Tax=Maniola jurtina TaxID... [more]
ATP-dependent6.180e-4733.63DNA helicase n=1 Tax=Thrips palmi TaxID=161013 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig746contigE_fasciculatus_S2_contig746:23122..24099 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score434.9
Seed ortholog evalue3.4e-119
Seed eggNOG ortholog2880.D7FZH9
Model size978
Hectar predicted targeting categoryother localisation
Exons1
EggNOG free text desc.G-quadruplex DNA unwinding
EggNOG OGsCOG0507@1,KOG0987@2759
Cds size978
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842408.523017-CDS-E_fasciculatus_S2_contig746:23121..240991696842408.523017-CDS-E_fasciculatus_S2_contig746:23121..24099Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig746 23122..24099 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig746.15630.1prot_E_fasciculatus_S2_contig746.15630.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig746 23122..24099 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig746.15630.1

>prot_E_fasciculatus_S2_contig746.15630.1 ID=prot_E_fasciculatus_S2_contig746.15630.1|Name=mRNA_E_fasciculatus_S2_contig746.15630.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=326bp
FGTKVVVLAGDTRQLAPVVVNGAEADTCAASVLSSSYYRARVKVFRLTKT
MRNREDPPFSKMVDDIGDGVSPVDEEGFTTISGVQTEQDLEKSIDFVFPL
EVLKDPIACAKRAVISLHKDTVDDINDRVLTRIPDVCHTLEGRTLLDHEH
LEGDTDDVFCMSDYLSLLQPPGIPAHTIRLKKGVVVMLCRNLSIDDKLTN
GSKVLVMDINAYTLQVKTLDDGTIHWLPRITFKFVTWQGVAVKRVQFPVR
LCFAVTVHRAQGQTLDRVCFDLSRHPFAHGHVYVGLSRVRKSADMIIFTT
PDRIDDNGFARVHNVVFMSLLPAVE*
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mRNA from alignment at E_fasciculatus_S2_contig746:23122..24099-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig746.15630.1 ID=mRNA_E_fasciculatus_S2_contig746.15630.1|Name=mRNA_E_fasciculatus_S2_contig746.15630.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=978bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig746:23122..24099- (Ectocarpus fasciculatus EfasUO2)
TTCGGGACCAAAGTGGTAGTTCTTGCAGGAGACACACGGCAGCTGGCTCC CGTCGTTGTCAATGGCGCAGAAGCCGATACGTGCGCGGCATCCGTCCTCT CCAGTTCTTACTATCGTGCCAGGGTGAAGGTGTTCCGCCTCACGAAAACA ATGCGTAATCGCGAGGACCCCCCATTTTCAAAAATGGTCGATGACATCGG CGATGGCGTTTCTCCGGTCGACGAGGAAGGGTTCACAACGATTTCTGGTG TACAAACAGAACAGGATCTCGAAAAGTCCATTGATTTTGTATTTCCACTC GAAGTTCTCAAAGATCCCATCGCTTGTGCCAAGCGCGCCGTCATTTCCTT GCACAAAGACACCGTTGACGACATCAACGACAGAGTTTTGACTCGGATTC CCGACGTTTGTCACACGTTGGAAGGGCGAACTTTGCTGGATCATGAGCAT CTAGAGGGTGATACGGATGACGTCTTTTGCATGTCTGATTACTTGAGTTT GTTGCAACCGCCCGGTATCCCGGCACATACCATTCGCCTAAAAAAGGGTG TGGTCGTTATGTTATGCCGGAACCTTTCCATCGATGATAAATTAACGAAC GGGTCTAAGGTCCTTGTTATGGATATCAACGCGTACACGCTGCAAGTGAA AACGCTCGATGATGGTACCATACATTGGCTCCCGCGCATTACGTTTAAGT TCGTAACCTGGCAGGGCGTAGCTGTTAAAAGGGTTCAGTTCCCTGTGCGT CTGTGTTTTGCTGTCACGGTGCACAGAGCACAAGGCCAGACCTTAGATCG TGTATGTTTCGATTTGAGTCGCCACCCATTTGCGCATGGGCACGTATATG TAGGGTTGTCCCGAGTCCGTAAGTCTGCTGACATGATCATTTTTACGACG CCTGATCGCATAGATGATAACGGATTTGCCAGGGTTCATAATGTTGTATT CATGTCTTTGTTACCGGCTGTCGAATAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig746:23122..24099-

>mRNA_E_fasciculatus_S2_contig746.15630.1 ID=mRNA_E_fasciculatus_S2_contig746.15630.1|Name=mRNA_E_fasciculatus_S2_contig746.15630.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=978bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig746:23122..24099- (Ectocarpus fasciculatus EfasUO2)
TTCGGGACCAAAGTGGTAGTTCTTGCAGGAGACACACGGCAGCTGGCTCC
CGTCGTTGTCAATGGCGCAGAAGCCGATACGTGCGCGGCATCCGTCCTCT
CCAGTTCTTACTATCGTGCCAGGGTGAAGGTGTTCCGCCTCACGAAAACA
ATGCGTAATCGCGAGGACCCCCCATTTTCAAAAATGGTCGATGACATCGG
CGATGGCGTTTCTCCGGTCGACGAGGAAGGGTTCACAACGATTTCTGGTG
TACAAACAGAACAGGATCTCGAAAAGTCCATTGATTTTGTATTTCCACTC
GAAGTTCTCAAAGATCCCATCGCTTGTGCCAAGCGCGCCGTCATTTCCTT
GCACAAAGACACCGTTGACGACATCAACGACAGAGTTTTGACTCGGATTC
CCGACGTTTGTCACACGTTGGAAGGGCGAACTTTGCTGGATCATGAGCAT
CTAGAGGGTGATACGGATGACGTCTTTTGCATGTCTGATTACTTGAGTTT
GTTGCAACCGCCCGGTATCCCGGCACATACCATTCGCCTAAAAAAGGGTG
TGGTCGTTATGTTATGCCGGAACCTTTCCATCGATGATAAATTAACGAAC
GGGTCTAAGGTCCTTGTTATGGATATCAACGCGTACACGCTGCAAGTGAA
AACGCTCGATGATGGTACCATACATTGGCTCCCGCGCATTACGTTTAAGT
TCGTAACCTGGCAGGGCGTAGCTGTTAAAAGGGTTCAGTTCCCTGTGCGT
CTGTGTTTTGCTGTCACGGTGCACAGAGCACAAGGCCAGACCTTAGATCG
TGTATGTTTCGATTTGAGTCGCCACCCATTTGCGCATGGGCACGTATATG
TAGGGTTGTCCCGAGTCCGTAAGTCTGCTGACATGATCATTTTTACGACG
CCTGATCGCATAGATGATAACGGATTTGCCAGGGTTCATAATGTTGTATT
CATGTCTTTGTTACCGGCTGTCGAATAG
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