prot_E_fasciculatus_S2_contig744.15612.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig744.15612.1
Unique Nameprot_E_fasciculatus_S2_contig744.15612.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length86
Homology
BLAST of mRNA_E_fasciculatus_S2_contig744.15612.1 vs. uniprot
Match: D7FLE3_ECTSI (ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP) transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLE3_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 2.340e-38
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0
Query:    1 MQFSQKERAVVKEENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAKKAAEPAS 70
            MQFSQKERAVVK+ENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAKKAAEPAS
Sbjct:    1 MQFSQKERAVVKQENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAKKAAEPAS 70          
BLAST of mRNA_E_fasciculatus_S2_contig744.15612.1 vs. uniprot
Match: A0A6H5JHH0_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHH0_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 7.730e-38
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0
Query:    1 MQFSQKERAVVKEENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAKKAAEPAS 70
            MQFSQKERAVVKEENPDMKVTEISK+LGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAKKAAEPAS
Sbjct:   41 MQFSQKERAVVKEENPDMKVTEISKLLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAKKAAEPAS 110          
BLAST of mRNA_E_fasciculatus_S2_contig744.15612.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 6.370e-16
Identity = 41/66 (62.12%), Postives = 54/66 (81.82%), Query Frame = 0
Query:    1 MQFSQKERAVVKEENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAKKAA 66
            MQFSQ  RA VK +NP++KVTEISKVLG +W ++D+  K P+Q KAD+DKARY++E  AY++KKAA
Sbjct:  561 MQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKARYKRERDAYDSKKAA 626          
BLAST of mRNA_E_fasciculatus_S2_contig744.15612.1 vs. uniprot
Match: M7X9L2_RHOT1 (Nucleosome binding protein (Nhp6a) n=6 Tax=Rhodosporidium toruloides TaxID=5286 RepID=M7X9L2_RHOT1)

HSP 1 Score: 73.2 bits (178), Expect = 1.200e-14
Identity = 34/62 (54.84%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 MQFSQKERAVVKEENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNA 62
            M FSQ +R+VVKEENPD+   EI K+LGA+W+E+ ++++ P+++KA  DK+RY+KE AAY+A
Sbjct:   33 MHFSQDQRSVVKEENPDVTFGEIGKILGAKWKELPEDERKPYEEKASADKSRYEKEKAAYDA 94          
BLAST of mRNA_E_fasciculatus_S2_contig744.15612.1 vs. uniprot
Match: A0A1Y2FPQ8_9BASI (High mobility group box domain-containing protein n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2FPQ8_9BASI)

HSP 1 Score: 71.6 bits (174), Expect = 3.510e-14
Identity = 36/65 (55.38%), Postives = 50/65 (76.92%), Query Frame = 0
Query:    1 MQFSQKERAVVKEENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAKKA 65
            M FSQ+ RA VKEENP+    ++ K+LGA+W+EMDD++K PF K+A+ DKARY+ E  AY++K A
Sbjct:   36 MFFSQENRATVKEENPEASFGDLGKLLGAKWKEMDDDEKKPFVKQANDDKARYETEKEAYDSKAA 100          
BLAST of mRNA_E_fasciculatus_S2_contig744.15612.1 vs. uniprot
Match: A0A0P9IRN0_RHOGW (HMG box domain-containing protein n=1 Tax=Rhodotorula graminis (strain WP1) TaxID=578459 RepID=A0A0P9IRN0_RHOGW)

HSP 1 Score: 70.9 bits (172), Expect = 9.130e-14
Identity = 45/90 (50.00%), Postives = 61/90 (67.78%), Query Frame = 0
Query:    1 MQFSQKERAVVKEENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYN------AKKAAEPASXXXXXXXXXSDEES 84
            M FSQ +R+ VKEENPD+   EI K+LGA+W+E  D++K P+Q KA+ DK RY+KE +AY+      AK A++  +  XXX    SDEES
Sbjct:   33 MHFSQDKRSEVKEENPDVTFGEIGKLLGAKWKEATDDEKKPYQAKAEADKERYEKEKSAYDEENPDQAKPASKXXAPAXXXKKASSDEES 122          
BLAST of mRNA_E_fasciculatus_S2_contig744.15612.1 vs. uniprot
Match: A0A8H7Q4Q9_MORIS (HMG box domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q4Q9_MORIS)

HSP 1 Score: 66.6 bits (161), Expect = 1.970e-12
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 0
Query:    1 MQFSQKERAVVKEENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAK 63
            M FSQ+ R  VKE+NP+    +I K+LG +W+EMDD+DKAPF  KA+ DK RY+KE A ++ K
Sbjct:   39 MFFSQELRQKVKEDNPEASFGQIGKILGDKWKEMDDSDKAPFAAKAEADKKRYEKEKAEHDGK 101          
BLAST of mRNA_E_fasciculatus_S2_contig744.15612.1 vs. uniprot
Match: A0A4V5NCD6_9BASI (Non-histone chromosomal protein 6 n=1 Tax=Rhodotorula sp. CCFEE 5036 TaxID=1965284 RepID=A0A4V5NCD6_9BASI)

HSP 1 Score: 67.0 bits (162), Expect = 2.780e-12
Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    1 MQFSQKERAVVKEENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNA 62
            M FSQ +RA VKEE PD+   EI K+LGA+W+E D+ ++ P++ KA  +KARY+KE AAY+A
Sbjct:   33 MLFSQDKRAEVKEEKPDVTFGEIGKILGAKWKEADEAERKPYEDKAAAEKARYEKEKAAYDA 94          
BLAST of mRNA_E_fasciculatus_S2_contig744.15612.1 vs. uniprot
Match: A0A150GAH1_GONPE (HMG box domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GAH1_GONPE)

HSP 1 Score: 65.1 bits (157), Expect = 3.850e-12
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    8 RAVVKEENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAKK 64
            RA VKEENP   VT+I K LG  W+ ++D DK  + K+AD+DKARY KE AAY+ KK
Sbjct:    2 RAKVKEENPSFSVTDIGKKLGEMWKALEDEDKQKYHKQADEDKARYNKEQAAYSKKK 58          
BLAST of mRNA_E_fasciculatus_S2_contig744.15612.1 vs. uniprot
Match: A0A7S1X6A4_9CHLO (FACT complex subunit SSRP1 n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X6A4_9CHLO)

HSP 1 Score: 70.1 bits (170), Expect = 3.930e-12
Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = 0
Query:    1 MQFSQKERAVVKEENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAKKAA 66
            M FS K R  VKE+NP+    E+ K++GA+W+EM D++K P+ + A +DK RYQ+EM AY+AKKAA
Sbjct:  563 MMFSNKNRESVKEKNPEATFGEMGKLIGAKWKEMSDSEKEPYNEMAAEDKVRYQEEMKAYSAKKAA 628          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig744.15612.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLE3_ECTSI2.340e-3898.57ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP) t... [more]
A0A6H5JHH0_9PHAE7.730e-3898.57HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
D7FLF8_ECTSI6.370e-1662.12FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sili... [more]
M7X9L2_RHOT11.200e-1454.84Nucleosome binding protein (Nhp6a) n=6 Tax=Rhodosp... [more]
A0A1Y2FPQ8_9BASI3.510e-1455.38High mobility group box domain-containing protein ... [more]
A0A0P9IRN0_RHOGW9.130e-1450.00HMG box domain-containing protein n=1 Tax=Rhodotor... [more]
A0A8H7Q4Q9_MORIS1.970e-1253.97HMG box domain-containing protein n=1 Tax=Mortiere... [more]
A0A4V5NCD6_9BASI2.780e-1254.84Non-histone chromosomal protein 6 n=1 Tax=Rhodotor... [more]
A0A150GAH1_GONPE3.850e-1257.89HMG box domain-containing protein n=1 Tax=Gonium p... [more]
A0A7S1X6A4_9CHLO3.930e-1253.03FACT complex subunit SSRP1 n=1 Tax=Tetraselmis chu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 43..63
NoneNo IPR availablePRINTSPR00886HIGHMOBLTY12coord: 8..26
score: 28.85
coord: 45..65
score: 48.5
coord: 26..45
score: 36.11
NoneNo IPR availablePANTHERPTHR13711:SF302HIGH MOBILITY GROUP PROTEIN DSP1-RELATEDcoord: 1..79
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 1..79
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 1..62
e-value: 5.8E-19
score: 79.0
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 1..61
e-value: 9.8E-21
score: 74.0
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 1..61
score: 18.188
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 1..77
e-value: 5.5E-22
score: 79.8
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 1..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig744contigE_fasciculatus_S2_contig744:9845..10712 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig744.15612.1mRNA_E_fasciculatus_S2_contig744.15612.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig744 8942..12054 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig744.15612.1 ID=prot_E_fasciculatus_S2_contig744.15612.1|Name=mRNA_E_fasciculatus_S2_contig744.15612.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=86bp
MQFSQKERAVVKEENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDK
ARYQKEMAAYNAKKAAEPASEEEEEDDEGSDEESD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036910HMG_box_dom_sf
IPR009071HMG_box_dom