prot_E_fasciculatus_S2_contig7390.15569.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7390.15569.1
Unique Nameprot_E_fasciculatus_S2_contig7390.15569.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length372
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7390.15569.1 vs. uniprot
Match: D8LDA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDA0_ECTSI)

HSP 1 Score: 665 bits (1717), Expect = 2.340e-240
Identity = 334/373 (89.54%), Postives = 351/373 (94.10%), Query Frame = 0
Query:    1 MNQQRRPNAVRKPSQPFSCRRGIGAGMCYYAVDIEMVTIEGPDDLPARRAMVAAGVVNERLETLLYARVAVPRGCKVTDGVFARMQGGLLATWEEGIPASCVSDFLRRHVEEGGVVVGWELHNDLDVLGFERAASEIRNGKREALPTERAPIDSGSSLSFETWPGNGSSSSSSSTAHSRAVESPDAATV--VGRRRMRVVEVTDLFRTMNGLKCTLQEAYAHCFDRMEEGAHNAATDARMTMELFNLWRRTGEPPEPLGLPLSFFLVNFHSFKPSRSRQASLGMLRPDGGGAGGLGRGIHGALEQDSGSNTYKLKFRFQEGREAYLHCLERKMLSAGLAWEAAPEFVCGKKGARDGYQLSCGSFKMHVLERDR 371
            M QQR PNAVRKPSQPFSC RGI AG  YYAVDIEMVTIEGP+DLPARRAMV+ GVV+ERLETLLY RVAVPRGCKVTDGVFARMQGGLLATWEEGIPASCVSDFL RHVEEGGV+VGWELH+DL+VLGFE+AAS+IR+G+RE LPTERAPID GS LSF+T PGNGS++SSSSTA SRAVESPDAA    VGRRRMRVVEVTDLFRTMNGLKCTLQEAYAHCFDRMEEGAHNAA DARMTMELFNLWRR GEP EPLGLPLSFFLVNFHSFKPSRSRQASLGMLRP+GGGAGGLGRGIHGALE+DSGSNTYKLKFR +EGREAYLHCLERKML+AGLAWEAAPEFVCGKKGARDGYQLSCGSFKMHVLERDR
Sbjct:    1 MTQQRPPNAVRKPSQPFSCHRGIDAGARYYAVDIEMVTIEGPEDLPARRAMVSVGVVDERLETLLYGRVAVPRGCKVTDGVFARMQGGLLATWEEGIPASCVSDFLTRHVEEGGVLVGWELHSDLNVLGFEKAASQIRSGEREVLPTERAPIDGGS-LSFKTAPGNGSNTSSSSTARSRAVESPDAAAWPWVGRRRMRVVEVTDLFRTMNGLKCTLQEAYAHCFDRMEEGAHNAAADARMTMELFNLWRRAGEPREPLGLPLSFFLVNFHSFKPSRSRQASLGMLRPEGGGAGGLGRGIHGALEKDSGSNTYKLKFRSREGREAYLHCLERKMLAAGLAWEAAPEFVCGKKGARDGYQLSCGSFKMHVLERDR 372          
BLAST of mRNA_E_fasciculatus_S2_contig7390.15569.1 vs. uniprot
Match: A0A835YNX9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNX9_9STRA)

HSP 1 Score: 164 bits (416), Expect = 4.090e-44
Identity = 123/350 (35.14%), Postives = 169/350 (48.29%), Query Frame = 0
Query:   31 AVDIEMVTI-EGPDDLPARRAMVAAGVVNERLETLLYARVAVPRGCKVTDGVFARMQGGLLATWEEGIPASCVSDFLRRHVEEGGVVVGWELHNDLDVLGFERAASEIRNGKREALPTERAPIDSGSSLSFETWPGNGSSSSSSSTAHSRAVESPDAATVVGRRRMRVVEVTDLFRTMNGLKCTLQEAYAHCF-DRMEE--GAHNAATDARMTMELFNLWRRTGEPPEPLGLPLSFFLVNFHSFKPSRSRQAS----LGMLRPDGGGAGGLGRGIHGALEQDSGSNTYKLKFRFQEGREAYLHCLERKMLSAGL-AWEAAPEFVCGKKGARDGYQLSCGSFKMHVLERDR 371
            A+D EMV   + P +   R  +V+ GVV+  LE LLYAR+AVP    + D  FAR    L   W +GIP +      R  V+  G VVGW+L  DL+VLGFE AA+ +R G+R +       +D G  +S                                   +RVV+++D FR+++  KC L EAY   F DR  +  GAH+AA DAR+ MELF  WRR G  P  + L L F++VN H  +   + Q         LRP+ G      RG+   LEQD G N +KLKFR +  R AY+  + R+M +A      + P    G +      + SC  F  H+ E  R
Sbjct:   38 ALDCEMVWANKQPAETTLRPVVVSIGVVDTELENLLYARIAVPPDVDIVDDSFARTSANLHPDWTKGIPHTTAQVLFRTMVQRAGTVVGWQLDGDLEVLGFEVAAAALRAGRRLS-------VDFGGGVS-----------------------------------VRVVDLSDHFRSLHNSKCQLSEAYRAVFEDRPAQHWGAHHAAADARLCMELFRRWRRGG-CPRSVPLNLKFYVVNVHGLRRGGAHQERHQTLFEYLRPERG-----NRGV--VLEQDDGRN-FKLKFREENERAAYMCIVRRRMQAAHEDLGPSLPAQESGSEKVTAAVRYSCRLFTAHLYEITR 336          
BLAST of mRNA_E_fasciculatus_S2_contig7390.15569.1 vs. uniprot
Match: A0A7S0DL02_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DL02_9EUKA)

HSP 1 Score: 137 bits (345), Expect = 5.960e-34
Identity = 97/326 (29.75%), Postives = 154/326 (47.24%), Query Frame = 0
Query:   10 VRKPSQPFSCRRGIGAGMCYYAVDIEMVTIEGPDDLPARRAMVAAGVVNERLETLLYARVAVPRGCKVTDGVFARMQGGLLATWEEGIPASCVSDFLRRHVEEGGVVVGWELHNDLDVLGFERAASEIRNGKREALPTERAPIDSGSSLSFETWPGNGSSSSSSSTAHSRAVESPDAATVVGRRRMRVVEVTDLFRTMNGLKCTLQEAYAHCFDRMEEGAHNAATDARMTMELFNLWRRTGEPPEPLGLPLSFFLVNFHSFKPSR---SRQASLG-MLRPDGGGAGGLGRGIHGALEQDSGSNTYKLKFRFQEGREAYLHCLERKM 331
             R+P  P S  R   A    YA+D EM+ +   D+   ++A+V+ G+V+E +E +LYARV  P    V +  F R  GGL+A + +G+      D + R V+EG ++VGW++ +DL  LG E++           +P E+                                               ++++   F T NG +C L EAY   F R    AHNA  DA++TMEL++ W    +  + + + LSFF +N+H FK S    SR  +L   LRP         R +   +E+D G N YKLK+R +  R+AY+  +++++
Sbjct:   28 ARRPEGPLSPGRRARA----YAIDCEMIEVYLQDNNKLQQAVVSTGIVDESMEVILYARVRKPSSSIVVNDAFVRTSGGLIADYNKGLSIFSTRDVISRLVQEGAIIVGWQIDSDLRALGLEKS-----------IPPEQ-----------------------------------------------IIDLAYKFVTTNGHRCKLAEAYRTVF-RRNFLAHNAGDDAKVTMELYHYWNEA-QKRQTVRVDLSFFCINWHCFKLSNTGMSRGDALWKFLRPR-----STDREV--LIEEDDGKNAYKLKYRQKADRDAYMLLVKKRL 282          
BLAST of mRNA_E_fasciculatus_S2_contig7390.15569.1 vs. uniprot
Match: A0A8J6C368_DIALT (C3H1-type domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C368_DIALT)

HSP 1 Score: 119 bits (298), Expect = 8.070e-27
Identity = 95/327 (29.05%), Postives = 140/327 (42.81%), Query Frame = 0
Query:   21 RGIGAGMCYYAVDIEMVTIEGPDDLPARR--AMVAAGVVNERLETLLYARVAVPRGCKVTDGVFARMQGGLLATWEEGIPASCVSDFLRRHVEEGGVVVGWELHNDLDVLGFERAASEIRNGKREALPTERAPIDSGSSLSFETWPGNGSSSSSSSTAHSRAVESPDAATVVGRRRMRVVEVTDLFRTMNGLKCTLQEAYAHCFDRMEEGAHNAATDARMTMELFNLWRRTGEPPEPLGLPLSFFLVNFHSFKPSRSRQASLG--------------MLRPDGGGAGGLGRGIHGALEQDSGSNTYKLKFRFQEGREAYLHCLERKM 331
            + +  G   +AVD E + +     L AR     V+ G+V+E LET+LYARV +P  C+V D  FAR  G L   W  GI        +R  V++G ++VGW++  DL  L  E     + N  RE                                                    ++V+++D F+T  G KC L EAY   F R    AH+A  DA+MTMEL+N WR     P PL L   ++ V +HS++P    +A LG              +LRP+          +  AL ++     + LKFR    R AY + ++R++
Sbjct:   75 QALNNGQRAFAVDCEFIQVRQGKGLDAREFSVTVSVGIVSEMLETILYARVRMPARCQVWDDAFARTVGALQPDWALGIRVDIACALVREFVDDGHILVGWQIEQDLRGLKLEDI---LTNTPRE----------------------------------------------------QIVDLSDEFKTTQGNKCQLSEAYREIFGRTGS-AHDAIGDAKMTMELYNWWRTHSMQPTPLRL--CWYYVKWHSWRPV---EAGLGAHAGLDEYEAYRWKVLRPERSDRSTCIEELDDALRKE-----FVLKFRTDSERVAYFNLVKRRL 335          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7390.15569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LDA0_ECTSI2.340e-24089.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YNX9_9STRA4.090e-4435.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0DL02_9EUKA5.960e-3429.75Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A8J6C368_DIALT8.070e-2729.05C3H1-type domain-containing protein n=1 Tax=Diacro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 29..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7390contigE_fasciculatus_S2_contig7390:356..2523 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7390.15569.1mRNA_E_fasciculatus_S2_contig7390.15569.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7390 356..3073 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7390.15569.1 ID=prot_E_fasciculatus_S2_contig7390.15569.1|Name=mRNA_E_fasciculatus_S2_contig7390.15569.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=372bp
MNQQRRPNAVRKPSQPFSCRRGIGAGMCYYAVDIEMVTIEGPDDLPARRA
MVAAGVVNERLETLLYARVAVPRGCKVTDGVFARMQGGLLATWEEGIPAS
CVSDFLRRHVEEGGVVVGWELHNDLDVLGFERAASEIRNGKREALPTERA
PIDSGSSLSFETWPGNGSSSSSSSTAHSRAVESPDAATVVGRRRMRVVEV
TDLFRTMNGLKCTLQEAYAHCFDRMEEGAHNAATDARMTMELFNLWRRTG
EPPEPLGLPLSFFLVNFHSFKPSRSRQASLGMLRPDGGGAGGLGRGIHGA
LEQDSGSNTYKLKFRFQEGREAYLHCLERKMLSAGLAWEAAPEFVCGKKG
ARDGYQLSCGSFKMHVLERDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf