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Homology
BLAST of mRNA_E_fasciculatus_S2_contig725.15441.1 vs. uniprot
Match: A0A6H5K4D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D0_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 1.130e-5 Identity = 30/41 (73.17%), Postives = 31/41 (75.61%), Query Frame = 0
Query: 5 LNNRAGLLKNLGKYADADSLYARSQRIREKALGPDHPGVAQ 45
LNNRA LLK GKY +A LY RS IREKALGPDHP VAQ
Sbjct: 821 LNNRALLLKAQGKYDEAGKLYERSLAIREKALGPDHPDVAQ 861
BLAST of mRNA_E_fasciculatus_S2_contig725.15441.1 vs. uniprot
Match: A0A6H5K0C4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C4_9PHAE) HSP 1 Score: 55.8 bits (133), Expect = 5.630e-5 Identity = 24/37 (64.86%), Postives = 29/37 (78.38%), Query Frame = 0
Query: 387 QSKYEEAAPLYVRAIGIGETNLGADHPKLATWLSSRA 423
Q KYEEA PLY+RA+ IGE LG DHP LA WL+++A
Sbjct: 7 QGKYEEADPLYLRAVEIGEKTLGPDHPTLAVWLNNKA 43
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002151 | Kinesin light chain | PRINTS | PR00381 | KINESINLIGHT | coord: 168..188
score: 43.81
coord: 59..77
score: 40.0
coord: 124..141
score: 48.89
coord: 203..224
score: 45.45 |
| IPR019734 | Tetratricopeptide repeat | SMART | SM00028 | tpr_5 | coord: 500..533
e-value: 8.9E-4
score: 28.6
coord: 170..203
e-value: 55.0
score: 8.5
coord: 2..35
e-value: 17.0
score: 12.9
coord: 254..287
e-value: 18.0
score: 12.8
coord: 44..77
e-value: 4.5
score: 16.2
coord: 458..491
e-value: 3.4
score: 16.7
coord: 86..119
e-value: 0.024
score: 23.8
coord: 212..245
e-value: 30.0
score: 10.8
coord: 416..449
e-value: 2.6
score: 17.1
coord: 128..161
e-value: 1.0
score: 18.4 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 1..156
e-value: 1.6E-53
score: 183.6 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 210..365
e-value: 1.4E-40
score: 141.1
coord: 378..556
e-value: 6.7E-53
score: 181.6 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 162..209
e-value: 4.8E-7
score: 31.6 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 2..117 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 387..487 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 246..351 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 122..241 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 492..551 |
| None | No IPR available | PFAM | PF13374 | TPR_10 | coord: 2..41
e-value: 1.9E-7
score: 30.7
coord: 128..167
e-value: 8.6E-10
score: 38.2 |
| None | No IPR available | PFAM | PF13424 | TPR_12 | coord: 169..242
e-value: 3.2E-13
score: 49.7
coord: 43..118
e-value: 1.5E-19
score: 70.1
coord: 254..322
e-value: 9.3E-13
score: 48.3
coord: 387..445
e-value: 1.8E-10
score: 41.0
coord: 461..532
e-value: 3.4E-17
score: 62.5 |
| None | No IPR available | PANTHER | PTHR45783 | FAMILY NOT NAMED | coord: 266..353
coord: 124..280
coord: 387..525
coord: 2..73
coord: 492..549
coord: 66..170 |
| IPR013026 | Tetratricopeptide repeat-containing domain | PROSITE | PS50293 | TPR_REGION | coord: 2..287
score: 14.886 |
| IPR013026 | Tetratricopeptide repeat-containing domain | PROSITE | PS50293 | TPR_REGION | coord: 416..533
score: 10.709 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E_fasciculatus_S2_contig725.15441.1 ID=prot_E_fasciculatus_S2_contig725.15441.1|Name=mRNA_E_fasciculatus_S2_contig725.15441.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=560bp
MADALNNRAGLLKNLGKYADADSLYARSQRIREKALGPDHPGVAQSLNNR
AELLRAQGKYAEAGPMYVQAIGIGEKTLGPHHPDLATWLNNRALCLTQQG
RFAEAEQLYERSQAIREEALGPEHPDFAQSLNNQAELLVARGQYAEAELL
YERSAKIWEQTLGPDHPTIADALNNRAALLVNQGTYGKAGLLYARSLAIR
ENALGPGHPDVAQSLNNQASLLKKQGKLEEVDPLYVRALEILGATAGEEQ
PTYAATLNNRAGLLVARGKNTEAELVYERATEIWEKTLGPDHPTVATALI
NRVGLLTSMGKYAEAELLSKRSQDIQEKVLGPDHPGMAQLFINRAELLRA
QVRVARNSKKLRWAHVWRWVIQILRGPLAYINYPATQSKYEEAAPLYVRA
IGIGETNLGADHPKLATWLSSRAELLEAQGHCEQAESLYRRALAIDVKTF
GPNHQEVATDLNNLAELLRGQGKFEDAELLYARVLAILGATLGEDHPNYA
TTLNNQALSLQGQGKYAEAEKQYKRAIEILEKTLGPNHQAVAAVLNNLAE
LPREHAGRS* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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