mRNA_E_fasciculatus_S2_contig7150.15327.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7150.15327.1 vs.
Match: NAD(P)-bd_dom (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHE2_ECTSI) HSP 1 Score: 300 bits (768), Expect = 7.570e-102 Identity = 157/174 (90.23%), Postives = 161/174 (92.53%), Query Frame = 1
Query: 1 MAARDVRVLSAAAAEPYKAVVFGSTGAVGKEVVRALAESEQCQSVVAVVRRLTPVSEWRGDAAKSXXXXXXXXXXXXANFNKVEVKRINYDTLETSLPEQEMRGKQIVFYCLGTTRSDAGSAANFKKVDFSYLEGVCQLCRVAGVDHFSLVSSQGASASSPLLYPKVKGQCEQV 522
M+ RDVRVLSAAAAEPYKAVVFGSTGAVGKEVVRALAESEQCQSVVAVVRRLTPVSEWRGDAAKS ANFNKVEVKRINYDTLETSLPEQEMRGKQ+VFYCLGTTRSDAGSAANFKKVDFSYLEGVCQLCRVAGVDHFSLVSSQGASASSPLLYPKVKGQCE++
Sbjct: 1 MSRRDVRVLSAAAAEPYKAVVFGSTGAVGKEVVRALAESEQCQSVVAVVRRLTPVSEWRGDAAKSKTSGSD------ANFNKVEVKRINYDTLETSLPEQEMRGKQVVFYCLGTTRSDAGSAANFKKVDFSYLEGVCQLCRVAGVDHFSLVSSQGASASSPLLYPKVKGQCEKL 168
BLAST of mRNA_E_fasciculatus_S2_contig7150.15327.1 vs.
Match: NAD(P)-bd_dom (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFB8_9STRA) HSP 1 Score: 136 bits (342), Expect = 4.920e-37 Identity = 74/156 (47.44%), Postives = 98/156 (62.82%), Query Frame = 1
Query: 55 AVVFGSTGAVGKEVVRALAESEQCQSVVAVVRRLTPVSEW--RGDAAKSXXXXXXXXXXXXANFNKVEVKRINYDTLETSLPEQEMRGKQIVFYCLGTTRSDAGSAANFKKVDFSYLEGVCQLCRVAGVDHFSLVSSQGASASSPLLYPKVKGQCE 516
AVVFG+TGA+G+EVV LA+ ++ VVA VRR +EW G AA K++VK ++YD + SLP+ + FYCLGTTR DAGSA++F K+D+ YLE + +C+ A V HFSLV++ GASASSP LY K KG+CE
Sbjct: 3 AVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAAA-----------------KIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCE 141
BLAST of mRNA_E_fasciculatus_S2_contig7150.15327.1 vs.
Match: NAD(P)-bd_dom (domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VAQ5_9STRA) HSP 1 Score: 110 bits (275), Expect = 6.240e-27 Identity = 66/166 (39.76%), Postives = 94/166 (56.63%), Query Frame = 1
Query: 49 YKAVVFGSTGAVGKEVVRALAESEQCQSVVAVVRRLTPVSEWRG-------DAAKSXXXXXXXXXXXXANFNKVEVKRINYDTLETSLPEQEMRGKQIV---FYCLGTTRSDAGSAANFKKVDFSYLEGVCQLCRVAGVDHFSLVSSQGASASSPLLYPKVKGQCE 516
Y A+V GSTGAVG+++V L S +C V+A+ RR P S W+ DAAK NK+EV++++++ S E++++ V F CLGTTR DAG A F+KVD Y+ +L + AGV +F L++SQGA+ S LYP+ KGQ E
Sbjct: 4 YVALVIGSTGAVGRDLVAELVSSAKCTKVIALTRRDVPESAWKSTFPSLDADAAK----------------NKLEVRKVDFN----SFSEEDIKPSDKVDAAFSCLGTTRKDAGLAEAFRKVDLDYVTAFAELSKAAGVSYFGLLTSQGANKDSWFLYPQTKGQVE 149
BLAST of mRNA_E_fasciculatus_S2_contig7150.15327.1 vs.
Match: NAD(P)-bd_dom (domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2GII6_PHYPR) HSP 1 Score: 108 bits (271), Expect = 2.460e-26 Identity = 66/166 (39.76%), Postives = 95/166 (57.23%), Query Frame = 1
Query: 49 YKAVVFGSTGAVGKEVVRALAESEQCQSVVAVVRRLTPVSEWR-------GDAAKSXXXXXXXXXXXXANFNKVEVKRINYDTLETSLPEQEMRGKQIV---FYCLGTTRSDAGSAANFKKVDFSYLEGVCQLCRVAGVDHFSLVSSQGASASSPLLYPKVKGQCE 516
Y A+V GSTGAVG+++V L S +C V+A+ RR P S W+ G+AAKS K+EV++++++ SL E +++ V F CLGTTR DAGSA F+KVD Y+ +L + AGV + L++SQGA+ S LYP+ KG+ E
Sbjct: 4 YVALVIGSTGAVGRDLVAELVASAKCSKVIALARRDVPESAWKSTFPSLDGEAAKS----------------KLEVRQVDFN----SLSEADIKPSDKVDAAFSCLGTTRKDAGSAEAFRKVDLEYVTNFAELSKAAGVPYMGLLTSQGANKDSWFLYPQTKGEVE 149
BLAST of mRNA_E_fasciculatus_S2_contig7150.15327.1 vs.
Match: Oxidoreductase (n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225W829_9STRA) HSP 1 Score: 108 bits (270), Expect = 3.470e-26 Identity = 64/159 (40.25%), Postives = 90/159 (56.60%), Query Frame = 1
Query: 49 YKAVVFGSTGAVGKEVVRALAESEQCQSVVAVVRRLTPVSEWRGDAAKSXXXXXXXXXXXXANFNKVEVKRINYDTLETSLPEQEMRGKQIV---FYCLGTTRSDAGSAANFKKVDFSYLEGVCQLCRVAGVDHFSLVSSQGASASSPLLYPKVKGQCE 516
Y A+V GSTGAVG+++V L S +C V+A+ RR P S W A NK+EV+++++D SL E +++ V F CLGTTR DAGSA F+KVD Y+ +L + AGV + L++SQGA+ S LYP+ KG+ E
Sbjct: 4 YVALVIGSTGAVGRDLVAELVSSSKCTKVIALARRDVPESAWSSTFPS---------LDASAAKNKLEVRQVDFD----SLSEADIKPSDKVDAAFSCLGTTRKDAGSAEAFRKVDLEYVTKFAELSKAAGVSYLGLLTSQGANKDSWFLYPQTKGEVE 149
BLAST of mRNA_E_fasciculatus_S2_contig7150.15327.1 vs.
Match: Oxidoreductase (htatip2-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B3I1_PLAHL) HSP 1 Score: 107 bits (268), Expect = 6.880e-26 Identity = 65/164 (39.63%), Postives = 93/164 (56.71%), Query Frame = 1
Query: 49 YKAVVFGSTGAVGKEVVRALAESEQCQSVVAVVRRLTPVSEWRG-------DAAKSXXXXXXXXXXXXANFNKVEVKRINYDTL-ETSLPEQEMRGKQIVFYCLGTTRSDAGSAANFKKVDFSYLEGVCQLCRVAGVDHFSLVSSQGASASSPLLYPKVKGQCE 516
Y A+V GSTGAVG+++V L S +C V+A+ R P EW+ +AAKS K+EV+++++D L E+ + + G F CLGTTR +AGSA F+KVD Y+ +LC+ A V +F LV+SQGA+ S LYP+ KG+ E
Sbjct: 4 YVALVIGSTGAVGRDLVADLVASAKCAKVIALARHDVPFLEWKSTFPSLDAEAAKS----------------KLEVRKVDFDNLSESDIGIADKIG--AAFSCLGTTRKNAGSAEAFRKVDLDYVVKFAELCKAANVPYFGLVTSQGANKDSWFLYPQTKGEVE 149
BLAST of mRNA_E_fasciculatus_S2_contig7150.15327.1 vs.
Match: Semialdhyde_dh (domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GPK3_PHYRM) HSP 1 Score: 104 bits (259), Expect = 7.300e-25 Identity = 64/164 (39.02%), Postives = 93/164 (56.71%), Query Frame = 1
Query: 49 YKAVVFGSTGAVGKEVVRALAESEQCQSVVAVVRRLTPVSEWRG-----DAAKSXXXXXXXXXXXXANFNKVEVKRINYDTLETSLPEQEMRGKQIV---FYCLGTTRSDAGSAANFKKVDFSYLEGVCQLCRVAGVDHFSLVSSQGASASSPLLYPKVKGQCE 516
Y A+V GSTGAVG+++V L S +C V+A+ RR P S W DAA + +K+EV++++++ SL E +++ V F CLGTTR DAGSA F+KVD Y+ +L + AGV + L++SQGA+ S LYP+ KG+ E
Sbjct: 4 YVALVIGSTGAVGRDLVVELVSSPKCAKVIALARRDVPESAWGATFPSLDAAAAK--------------DKLEVRQVDFN----SLSEADIKASDKVDAAFSCLGTTRKDAGSAEAFRKVDLEYVSKFAELSKTAGVPYMGLLTSQGANKDSWFLYPQTKGEVE 149
BLAST of mRNA_E_fasciculatus_S2_contig7150.15327.1 vs.
Match: NAD(P)-bd_dom (domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=G5A9K8_PHYSP) HSP 1 Score: 103 bits (256), Expect = 4.180e-24 Identity = 62/159 (38.99%), Postives = 88/159 (55.35%), Query Frame = 1
Query: 49 YKAVVFGSTGAVGKEVVRALAESEQCQSVVAVVRRLTPVSEWRGDAAKSXXXXXXXXXXXXANFNKVEVKRINYDTLETSLPEQEMRGKQIV---FYCLGTTRSDAGSAANFKKVDFSYLEGVCQLCRVAGVDHFSLVSSQGASASSPLLYPKVKGQCE 516
Y A+V GSTGAVG++VV L S +C V+A+ RR P + W A K+EV+R+++D SL + ++ V F CLGTTR DAGSA F+KVD Y+ +L + A V + L++SQGA+ +S LYP+ KG+ E
Sbjct: 4 YVALVIGSTGAVGRDVVAELVASAKCSKVIALARREVPEAAWSSTFPS---------LDAEAAKGKLEVRRVDFD----SLSDADISANDKVDAAFSCLGTTRKDAGSAEAFRKVDLEYVTKFAELSKAAEVPYMGLLTSQGANKNSWFLYPQTKGEVE 149
BLAST of mRNA_E_fasciculatus_S2_contig7150.15327.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GSM7_9STRA) HSP 1 Score: 102 bits (254), Expect = 8.090e-24 Identity = 62/164 (37.80%), Postives = 92/164 (56.10%), Query Frame = 1
Query: 49 YKAVVFGSTGAVGKEVVRALAESEQCQSVVAVVRRLTPVSEWRG-------DAAKSXXXXXXXXXXXXANFNKVEVKRINYDTL-ETSLPEQEMRGKQIVFYCLGTTRSDAGSAANFKKVDFSYLEGVCQLCRVAGVDHFSLVSSQGASASSPLLYPKVKGQCE 516
Y A+V GSTGAVG+++V L S +C+ V+A+ RR P + W +AAK+ K+EV++++++ L E + + G F CLGTTR DAGSA F+KVD Y+ +L + AGV + L++SQGA+ S LYP+ KG+ E
Sbjct: 3 YVALVIGSTGAVGRDLVADLVASAKCKKVIALARRDVPETAWGATFPALDTEAAKT----------------KLEVRQVDFNQLSEADIKPAD--GVNAAFSCLGTTRKDAGSAEAFRKVDLEYVTKFAELSKTAGVGYIGLLTSQGANKDSWFLYPQTKGEVE 148
BLAST of mRNA_E_fasciculatus_S2_contig7150.15327.1 vs.
Match: NAD(P)-bd_dom (domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQL0_9STRA) HSP 1 Score: 102 bits (254), Expect = 9.270e-24 Identity = 64/171 (37.43%), Postives = 96/171 (56.14%), Query Frame = 1
Query: 49 YKAVVFGSTGAVGKEVVRALAESEQCQSVVAVVRRLTPVSEW-------RGDAAKSXXXXXXXXXXXXANFNKVEVKRINYDTLETSLPEQEMR---GKQIVFYCLGTTRSDAGSAANFKK-----VDFSYLEGVCQLCRVAGVDHFSLVSSQGASASSPLLYPKVKGQCE 516
Y A+V GSTGAVG+++V L S +C V+A+ RR P S W +AAK+ K+EV++++++ L+ E++++ G F CLGTTR DAGSA F+K +D Y+ +L + AGV +F L++SQGA+ SS LYP+ KG+ E
Sbjct: 4 YVALVIGSTGAVGRDLVAELVASAKCSKVIALARRDVPESSWDTAFPSLNAEAAKT----------------KLEVRQVDFNQLD----EEKIKAADGVDAAFSCLGTTRKDAGSAEAFRKGVCVKLDLEYVTRFAELSKAAGVGYFGLLTSQGANKSSWFLYPQTKGEVE 154 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7150.15327.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7150.15327.1 >prot_E_fasciculatus_S2_contig7150.15327.1 ID=prot_E_fasciculatus_S2_contig7150.15327.1|Name=mRNA_E_fasciculatus_S2_contig7150.15327.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=174bp MAARDVRVLSAAAAEPYKAVVFGSTGAVGKEVVRALAESEQCQSVVAVVRback to top mRNA from alignment at E_fasciculatus_S2_contig7150:1151..4960- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7150.15327.1 ID=mRNA_E_fasciculatus_S2_contig7150.15327.1|Name=mRNA_E_fasciculatus_S2_contig7150.15327.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3810bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7150:1151..4960- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7150:1151..4960- >mRNA_E_fasciculatus_S2_contig7150.15327.1 ID=mRNA_E_fasciculatus_S2_contig7150.15327.1|Name=mRNA_E_fasciculatus_S2_contig7150.15327.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=522bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7150:1151..4960- (Ectocarpus fasciculatus EfasUO2)back to top |