mRNA_E_fasciculatus_S2_contig710.15276.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig710.15276.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX37_9PHAE) HSP 1 Score: 671 bits (1731), Expect = 1.600e-239 Identity = 347/373 (93.03%), Postives = 351/373 (94.10%), Query Frame = 2
Query: 89 MKQTSFLCLSGLAGSLAFVPSANVVPSSAWTSRSGGSTNSAADAGSRRGVPVCMAATQPK-GPEVMGLNLGKPAPVETPEDYVYEQFIPDTPMTRKFGHLRGAKVKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPEQMRKDTAALKEWGEGKTEEDVVEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEELLEKWFAVVGTSAAGATKDLNLYLEQIGKIEQAELLFKEIEIREKKRLAERLESKAQDAIKAAXXXXXXXXXXXXXEERIKNAKEGDVLPNDLPK 1204
MKQTSFLCLSGLAGSLAFVPS NVVPSSAWTSRS G TN+AADAGSRRGVPVCMAATQPK GPEVMGLNLGKPAPVETPEDYVYEQFIPDTPMTRKFGHLRGAKVKTVSETVADFY YYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDP+QMRKDT ALKEW EGKTEEDV+EMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEELLEKWFAVVGTSAAGA KDLNLY EQIGKIEQAELLFKEIEIREKKRLAERLE+KAQDAIKAA EERIKNAKEGDVLPNDLPK
Sbjct: 1 MKQTSFLCLSGLAGSLAFVPSTNVVPSSAWTSRSSGWTNAAADAGSRRGVPVCMAATQPKPGPEVMGLNLGKPAPVETPEDYVYEQFIPDTPMTRKFGHLRGAKVKTVSETVADFYKYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPDQMRKDTTALKEWAEGKTEEDVMEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEELLEKWFAVVGTSAAGAAKDLNLYQEQIGKIEQAELLFKEIEIREKKRLAERLEAKAQDAIKAAERAEQDAKNDAEEEERIKNAKEGDVLPNDLPK 373
BLAST of mRNA_E_fasciculatus_S2_contig710.15276.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAS7_ECTSI) HSP 1 Score: 419 bits (1077), Expect = 1.380e-142 Identity = 214/222 (96.40%), Postives = 218/222 (98.20%), Query Frame = 2
Query: 89 MKQTSFLCLSGLAGSLAFVPSANVVPSSAWTSRSGGSTNSAADAGSRRGVPVCMAATQPK-GPEVMGLNLGKPAPVETPEDYVYEQFIPDTPMTRKFGHLRGAKVKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPEQMRKDTAALKEWGEGKTEEDVVEMIKSDDR 751
MKQTSFLCLSGLAGSLAFVPS NVVPSSAWTSRSGGSTN+AADAGSRRG+P+CMAATQPK GPEVMGLNLGKPAPVETPEDYVYEQFIPDTPMTRKFGHLRGAKVKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDP+QMRKDT ALKEW EGKTEEDVVEMIKSDDR
Sbjct: 1 MKQTSFLCLSGLAGSLAFVPSTNVVPSSAWTSRSGGSTNAAADAGSRRGIPMCMAATQPKPGPEVMGLNLGKPAPVETPEDYVYEQFIPDTPMTRKFGHLRGAKVKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPDQMRKDTTALKEWAEGKTEEDVVEMIKSDDR 222
BLAST of mRNA_E_fasciculatus_S2_contig710.15276.1 vs.
Match: Uncharacterized (protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA6_VAULI) HSP 1 Score: 183 bits (465), Expect = 1.210e-50 Identity = 105/261 (40.23%), Postives = 157/261 (60.15%), Query Frame = 2
Query: 347 IPDTPMTRKFGHLRGAKVKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPEQMRKDTAALKEWGEGKTEEDVVEMIKSDDR-------SNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEELLEKWFAVVGTSAAGATKDLNLYLEQIGKIEQAELLFKEIEIREKKRLAERLESKAQDAIKAA 1108
+PDT M ++FGHL+G VKTVSET+ F I Y+K +L Q+RT++ + LQSTHL V + F YD +FG GFY+ F + M+AYP G+A+LI+ A+V ++ ++PE++++D + + E T D+ K +++ SNI D FY LY + WG+G+ M+ +G+ TEE +E ++G S A +DL Y + + K+ QAE LFKEIEIREKK++AERLE KA+ A++AA
Sbjct: 7 VPDTAMYKRFGHLKGKDVKTVSETIKSFCIQYQKPILPQYRTMINDVLQSTHLNVVNGCFIYDAMFGYGFYSLFYKLMKAYPGTGEADLIYAAMVTSLD--MEPEKLKEDHETISKLIENMTRADLENSFKGENQNLLSEISSNIKADEFY-----------------------LYTKTWGIGLIEAMDKVGIPLTEENIESLANMIGFSPIKARQDLVQYKDVLDKVAQAEQLFKEIEIREKKKMAERLEEKAKRALEAA 242
BLAST of mRNA_E_fasciculatus_S2_contig710.15276.1 vs.
Match: Thylakoid (formation protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGT7_9STRA) HSP 1 Score: 180 bits (456), Expect = 2.250e-49 Identity = 103/253 (40.71%), Postives = 155/253 (61.26%), Query Frame = 2
Query: 350 PDTPMTRKFGHLRGAKVKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPEQMRKDTAALKEWGEGKTEEDVVEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEELLEKWFAVVGTSAAGATKDLNLYLEQIGKIEQAELLFKEIEIREKKRLAERLESKAQDAIKAA 1108
PDTP+ ++FG L+G VK VSE++ F Y K +L Q+RT+V + +QSTHL+V DARFKYD +F G + F + MR+YP G+ ++IFD ++ I LDP Q+ D L W + +E D+ E +K + S + VA ++ +++LY++ WG+G+ +ME G+E +EE +E + A++G A A +DL Y E + K QAE LFKEIEIREKK++A+RLE KA+ A++ A
Sbjct: 4 PDTPLVKRFGSLKGRDVKPVSESMMSFCKCYPKPILPQYRTLVNDLIQSTHLSVVDARFKYDAVFATGLHGIFFKLMRSYPGEGEEKVIFDCLMNCID--LDPAQVTADAEGLISWAKSASEADLEEAMKGEGSSALAA----VANAA------------KEDEFYLYSKNWGLGLILIMEAAGVETSEEKMEHFVALLGFPAGKAKQDLLQYKEVLEKTAQAEQLFKEIEIREKKKMADRLEEKARRALEEA 238
BLAST of mRNA_E_fasciculatus_S2_contig710.15276.1 vs.
Match: Thylakoid (formation protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK23_9STRA) HSP 1 Score: 174 bits (442), Expect = 3.070e-47 Identity = 99/253 (39.13%), Postives = 153/253 (60.47%), Query Frame = 2
Query: 350 PDTPMTRKFGHLRGAKVKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPEQMRKDTAALKEWGEGKTEEDVVEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEELLEKWFAVVGTSAAGATKDLNLYLEQIGKIEQAELLFKEIEIREKKRLAERLESKAQDAIKAA 1108
PDTP ++FG L G +VKTVS ++ F YK+ +L Q+RTIV + +QSTHLT+ DARFKYD +F +G + + R +++YP G+A+ IFDA+ + L+ + D +L W + +E D+V +K + S + + +AR +D +++LY+++WG+G+ +ME G+E T+E + + VG A +DL Y + + K QAE LFKEIEIREKK++AERLE KA+ A+ A
Sbjct: 7 PDTPGAKRFGDLSGKEVKTVSASMTRFCEQYKRPILPQYRTIVNDLIQSTHLTLVDARFKYDAVFALGLHGIYFRLLKSYPGEGEAQTIFDALTNCLD--LESASIASDAESLSTWAKSASEADLVAALKGEGDSQLAS----IARAA------------KDDEFYLYSKMWGLGLIQMMEGAGIETTQEKVVELVEYVGFPVAKVKQDLVQYKDVLEKALQAEQLFKEIEIREKKKMAERLEEKAKRALAQA 241
BLAST of mRNA_E_fasciculatus_S2_contig710.15276.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W6W5_9STRA) HSP 1 Score: 146 bits (369), Expect = 5.150e-36 Identity = 88/262 (33.59%), Postives = 155/262 (59.16%), Query Frame = 2
Query: 335 YEQFIPDTPMTRKFGHLRGAKVKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPEQMRKDTAALKEWGEGKTEEDVVEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEE----LLEKWFAVVGTSAAGATKDLNLYLEQIGKIEQAELLFKEIEIREKKRLAERLESKAQDAIKAA 1108
YE +T +K+GHL+GAK++TVSE A+F V ++ ++T+ + +THL V +ARFK D ++ +G +S ++ YP P QA+ I A+ + + +D ++ + ++++W +GKT++DV+ +K + S I +A+ ++ ++++Y+R +G+G+ +MEN+G+E T + ++E+W +G S A+ D + Y + K+E E + KEIEIREKKR+AERLE+KA+ AI AA
Sbjct: 54 YESGAANTEFAKKYGHLKGAKIRTVSEAFAEFTDIVGSPVNAVYKNMITDIVSTTHLMVSNARFKRDAVWSLGIVSSLNLLLKNYPEPEQAKQIKSALFECMF--MDEAEVLAEAKSIEDWAQGKTKDDVLAELKGEGSSPIAA----IAKAA------------KNDEFWMYSRFFGLGLVKVMENVGVEFTPDDVYPVMEQWLGTMGKSHFTASSDSDTYFKIRNKLELMETMMKEIEIREKKRMAERLENKAEMAILAA 297
BLAST of mRNA_E_fasciculatus_S2_contig710.15276.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1AK03_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.050e-32 Identity = 86/238 (36.13%), Postives = 134/238 (56.30%), Query Frame = 2
Query: 398 VKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPEQMRKDTAALKEWGEGKTEEDVVEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEP-TEELLEKWFAVVGTSAAGATKDLNLYLEQIGKIEQAELLFKEIEIREKKRLAERLESKAQDAIKAA 1108
V VS + F Y K ++ +R ++ + + +THLTV F+Y+ FG+G T + F +YP PG A+ IFDA++ ++ LDP + DT A+ EW +GKTE V+ I + + S I V EK F+Y+R++ +GVF +M +GL+ +E+ LE+WF+ + + D +L+ I ++ AE +FKEIEIREKK+LA+RLE KA+ A +AA
Sbjct: 61 VPPVSVAIQKFNELYSKPIIPMYRALINDLIVTTHLTVVRKDFQYNQFFGLGMQTIYESFFTSYPEPGAAKDIFDAILGSLN--LDPAVVAADTKAVLEWADGKTEAAVLASIDAPEGSAIAETMAAVKAN----------EK------FIYSRVFAIGVFKVMGKVGLDTISEDDLERWFSAMNITTGLIKSDYDLFNGSIERMRDAEQMFKEIEIREKKKLADRLEKKAKSAAEAA 280
BLAST of mRNA_E_fasciculatus_S2_contig710.15276.1 vs.
Match: Hypothetical (protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEQ4_9RHOD) HSP 1 Score: 135 bits (340), Expect = 1.610e-32 Identity = 81/229 (35.37%), Postives = 125/229 (54.59%), Query Frame = 2
Query: 362 MTRKFGHLRGAKVKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPEQMRKDTAALKEWGEGKTEEDVVEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEELLEKWFAVVGTSAAGATKDLNLYLEQIGKIEQAELLFKEIEIR 1048
+ K+GHLRG VKTV++ + DF + + V + + +I+ E+L STHL A F+YDP+FG GF SF F+ YP G L+FDA++KA+ LD +Q+R D A++ W E + ED V + +N V + T P+ E WF Y+R++G+G+F +ME +G++ +E L +W + S A + Y I K++ AE LF E+ R
Sbjct: 24 LEEKYGHLRGRSVKTVADALRDFNDTFNRPVFSVYSSIINEFLASTHLARVCAAFRYDPIFGYGFTESFNDFLANYPNEGDRTLLFDAIIKALD--LDRQQIRDDAEAVRSWLESVSSEDEVFSLLDSPGNNKVAQALHYVATA--PYFE----------WF-YSRVFGIGLFKIMEKVGVKIDQEALRRWSEKLNISIAKLEDEWASYGSAIEKMKVAEQLFAEVTAR 237
BLAST of mRNA_E_fasciculatus_S2_contig710.15276.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T5P1_9STRA) HSP 1 Score: 134 bits (338), Expect = 2.990e-32 Identity = 85/260 (32.69%), Postives = 148/260 (56.92%), Query Frame = 2
Query: 353 DTPMTRKFGHLRGAKVKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPEQMRKDTAALKEWGEGKTEEDVVEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEE----LLEKWFAVVGTSAAGAT----KDLNLYLEQIGKIEQAELLFKEIEIREKKRLAERLESKAQDAIKAA 1108
DT +++G + G K++TV E ++F + + +++IV++ + +THL +ARF DP++ +G ++ ++ YP A+ I A+++++G +D E +RKD + EW +GK+++DV + +K + S + VAR KGE+ +++Y+R +G+G+ +ME +G+E + ++E+W VG S T D +LY K+E E + KEIEIREKKR+AERLE KA+ A+K A
Sbjct: 13 DTEFAKRYGSITGMKIRTVGEAFSEFTRILGQPINALYKSIVSDIVGTTHLITVNARFNRDPIWSLGILSAMDLVLKTYPEQDMAKKIVSAILESVG--IDEEDLRKDAQTVLEWAQGKSKDDVTQAMKGEGDSPLAD----VARAA----------KGEE--FWMYSRYFGIGLIKVMETVGVEMESDTAYSVMEEW---VGKSMEKPTFTACADSDLYFRTKNKLELMETMMKEIEIREKKRMAERLEEKAEMALKKA 251
BLAST of mRNA_E_fasciculatus_S2_contig710.15276.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MGY8_9STRA) HSP 1 Score: 132 bits (332), Expect = 7.300e-31 Identity = 88/263 (33.46%), Postives = 148/263 (56.27%), Query Frame = 2
Query: 335 YEQFIPDTPMTRKFGHLRGAKVKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPEQMRKDTAALKEWGEGKTEEDVVEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENI--GLEPTEE--LLEKWF-AVVGTSAAGATKDLNLYLEQIGKIEQAELLFKEIEIREKKRLAERLESKAQDAIKAA 1108
Y+ +T RK+GHL+G VKTV E +F + + ++ V++ + +THL +ARF+ DP++ +G T+ + YP P + I A++K+IG +D +++R + + +W EGKT+E+V +K + S + VAR + K +D +++Y+R +GVG+ +ME + G E + ++E+W A +G S+ A D +LY K++ E++ KE+EIREKKR+AERLE+KA AI A
Sbjct: 57 YQPGAANTEFARKYGHLQGRLVKTVGEAFEEFTAILGRPINALYKGAVSDIVGTTHLITVNARFQRDPVWSLGLLTAMDLITKNYPEPDVGQQIVSALMKSIG--MDEDELRAEAKVVSDWAEGKTKEEVAAALKGEGDSIVSA----VAR----------DAKADD--FWMYSRFFGVGLIRVMEIVAPGTEKDDAYTVMEQWVGASMGKSSFTACSDSDLYFRTKAKLDIMEVMMKEVEIREKKRMAERLEAKADAAIAQA 301 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig710.15276.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig710.15276.1 >prot_E_fasciculatus_S2_contig710.15276.1 ID=prot_E_fasciculatus_S2_contig710.15276.1|Name=mRNA_E_fasciculatus_S2_contig710.15276.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=374bp MKQTSFLCLSGLAGSLAFVPSANVVPSSAWTSRSGGSTNSAADAGSRRGVback to top mRNA from alignment at E_fasciculatus_S2_contig710:1514..8904+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig710.15276.1 ID=mRNA_E_fasciculatus_S2_contig710.15276.1|Name=mRNA_E_fasciculatus_S2_contig710.15276.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7391bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig710:1514..8904+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig710:1514..8904+ >mRNA_E_fasciculatus_S2_contig710.15276.1 ID=mRNA_E_fasciculatus_S2_contig710.15276.1|Name=mRNA_E_fasciculatus_S2_contig710.15276.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1122bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig710:1514..8904+ (Ectocarpus fasciculatus EfasUO2)back to top |